Methane transport from the active layer to lakes in the Arctic using Toolik Lake, Alaska, as a case study

Identification of methane cycling pathways in Quaternary alluvial-lacustrine aquifers using multiple isotope and microbial indicators

Groundwater rich in dissolved methane is often overlooked in the global or regional carbon cycle. Considering the knowledge gap in understanding the biogeochemical behavior of methane in shallow aquifers, particularly those in humid alluvial-lacustrine plains with high organic carbon content, we investigated methane sources and cycling pathways in groundwater systems at the central Yangtze River basins. Composition of multiple stable isotopes (2H/18O in water, 13C in dissolved inorganic carbon, 13C/2H in methane, and 13C in carbon dioxide) was combined with the characteristics of microbes and dissolved organic matter (DOM) in the study. The results revealed significant concentrations of biogenic methane reaching up to 13.05 mg/L in anaerobic groundwater environments with abundant organic matter. Different pathways for methane cycling (methanogenic CO2-reduction and acetate-fermentation, and methane oxidation) were identified. CO2-reduction dominated acetate-fermentation in the two methanogenic pathways primarily associated with humic DOM, while methane oxidation was more closely associated with microbially derived DOM. The abundance of obligate CO2-reduction microorganisms (Methanobacterium and Methanoregula) was higher in samples with substantial CO2-reduction, as indicated by isotopic composition. The obligate acetate-fermentation microorganism (Methanosaeta) was more abundant in samples exhibiting evident acetate-fermentation. Additionally, a high abundance of Candidatus Methanoperedens was identified in samples with apparent methane oxidation. Comparing our findings with those in other areas, we found that various factors, such as groundwater temperature, DOM abundance and types, and hydrogeological conditions, may lead to differences in groundwater methane cycling. This study offered a new perspective and understanding of methane cycling in worldwide shallow alluvial-lacustrine aquifer systems without geothermal disturbance.

Groundwater discharge as a driver of methane emissions from Arctic lakes

Lateral CH₄ inputs to Arctic lakes through groundwater discharge could be substantial and constitute an important pathway that links CH₄ production in thawing permafrost to atmospheric emissions via lakes. Yet, groundwater CH₄ inputs and associated drivers are hitherto poorly constrained because their dynamics and spatial variability are largely unknown. Here, we unravel the important role and drivers of groundwater discharge for CH₄ emissions from Arctic lakes. Spatial patterns across lakes suggest groundwater inflows are primarily related to lake depth and wetland cover. Groundwater CH₄ inputs to lakes are higher in summer than in autumn and are influenced by hydrological (groundwater recharge) and biological drivers (CH₄ production). This information on the spatial and temporal patterns on groundwater discharge at high northern latitudes is critical for predicting lake CH₄ emissions in the warming Arctic, as rising temperatures, increasing precipitation, and permafrost thawing may further exacerbate groundwater CH₄ inputs to lakes.

CH₄ inputs to Arctic lakes via groundwater discharge are an important pathway that links CH₄ production in thawing permafrost to emission via lakes. Here the authors unravel the role and drivers of groundwater inflows for CH₄ emissions from Arctic lakes.

Spatial distribution and biogeochemistry of redox active species in arctic sedimentary porewaters and seeps

Redox active species in Arctic lacustrine sediments play an important, regulatory role in the carbon cycle, yet there is little information on their spatial distribution, abundance, and oxidation states. Here, we use voltammetric microelectrodes to quantify the in situ concentrations of redox-active species at high vertical resolution (mm to cm) in the benthic porewaters of an oligotrophic Arctic lake (Toolik Lake, AK, USA). Mn(II), Fe(II), O₂, and Fe(III)-organic complexes were detected as the major redox-active species in these porewaters, indicating both Fe(II) oxidation and reductive dissolution of Fe(III) and Mn(IV) minerals. We observed significant spatial heterogeneity in their abundance and distribution as a function of both location within the lake and depth. Microbiological analyses and solid phase Fe(III) measurements were performed in one of the Toolik Lake cores to determine the relationship between biogeochemical redox gradients and microbial communities. Our data reveal iron cycling involving both oxidizing (FeOB) and reducing (FeRB) bacteria. Additionally, we profiled a large microbial iron mat in a tundra seep adjacent to an Arctic stream (Oksrukuyik Creek) where we observed Fe(II) and soluble Fe(III) in a highly reducing environment. The variable distribution of redox-active substances at all the sites yields insights into the nature and distribution of the important terminal electron acceptors in both lacustrine and tundra environments capable of exerting significant influences on the carbon cycle.

Recent Changes in Groundwater and Surface Water in Large Pan-Arctic River Basins

Surface and groundwater in large pan-Arctic river basins are changing rapidly. High-quality estimates of these changes are challenging because of the limits on the data quality and time span of satellite observations. Here, the term pan-Arctic river refers to the rivers flowing to the Arctic Ocean basin. In this study, we provide a new evaluation of groundwater storage (GWS) changes in the Lena, Ob, Yenisei, Mackenzie and Yukon River basins from the GRACE total water storage anomaly product, in situ runoff, soil moisture form models and a snow water equivalent product that has been significantly improved. Seasonal Trend decomposition using Loess was utilized to obtain trends in GWS. Changes in surface water (SW) between 1984 and 2019 in these basins were also examined based on the Joint Research Centre Global Surface Water Transition data. Results suggested that there were great GWS losses in the North American river basins, totaling approximately −219 km3, and GWS gains in the Siberian river basins, totaling ~340 km3, during 2002–2017. New seasonal and permanent SWs are the primary contributors to the SW transition, accounting for more than 50% of the area of the changed SW in each basin. Changes in the Arctic hydrological system will be more significant and various in the case of rapid and continuous changes in permafrost.

Interannual, summer, and diel variability of CH4 and CO2 effluxes from Toolik Lake, Alaska, during the ice-free periods 2010-2015

Accelerated warming in the Arctic has led to concern regarding the amount of carbon emission potential from Arctic water bodies. Yet, aquatic carbon dioxide (CO₂) and methane (CH₄) flux measurements remain scarce, particularly at high resolution and over long periods of time. Effluxes of methane (CH₄) and carbon dioxide (CO₂) from Toolik Lake, a deep glacial lake in northern Alaska, were measured for the first time with the direct eddy covariance (EC) flux technique during six ice-free lake periods (2010-2015). CO₂ flux estimates from the lake (daily average efflux of 16.7 ± 5.3 mmol m^-2 d^-1) were in good agreement with earlier estimates from 1975-1989 using different methods. CH₄ effluxes in 2010-2015 (averaging 0.13 ± 0.06 mmol m^-2 d^-1) showed an interannual variation that was 4.1 times greater than median diel variations, but mean fluxes were almost one order of magnitude lower than earlier estimates obtained from single water samples in 1990 and 2011-2012. The overall global warming potential (GWP) of Toolik Lake is thus governed mostly by CO₂ effluxes, contributing 86-93% of the ice-free period GWP of 26-90 g CO_2,eq m^-2. Diel variation in fluxes was also important, with up to a 2-fold (CH₄) to 4-fold (CO₂) difference between the highest nighttime and lowest daytime effluxes. Within the summer ice-free period, on average, CH₄ fluxes increased 2-fold during the first half of the summer, then remained almost constant, whereas CO₂ effluxes remained almost constant over the entire summer, ending with a linear increase during the last 1-2 weeks of measurements. Due to the cold bottom temperatures of this 26 m deep lake, and the absence of ebullition and episodic flux events, Toolik Lake and other deep glacial lakes are likely not hot spots for greenhouse gas emissions, but they still contribute to the overall GWP of the Arctic.

Sub-oxycline methane oxidation can fully uptake CH4 produced in sediments: case study of a lake in Siberia

It is commonly assumed that methane (CH₄) released by lakes into the atmosphere is mainly produced in anoxic sediment and transported by diffusion or ebullition through the water column to the surface of the lake. In contrast to that prevailing idea, it has been gradually established that the epilimnetic CH₄ does not originate exclusively from sediments but is also locally produced or laterally transported from the littoral zone. Therefore, CH₄ cycling in the epilimnion and the hypolimnion might not be as closely linked as previously thought. We utilized a high-resolution method used to determine dissolved CH₄ concentration to analyze a Siberian lake in which epilimnetic and hypolimnetic CH₄ cycles were fully segregated by a section of the water column where CH₄ was not detected. This layer, with no detected CH₄, was well below the oxycline and the photic zone and thus assumed to be anaerobic. However, on the basis of a diffusion-reaction model, molecular biology, and stable isotope analyses, we determined that this layer takes up all the CH₄ produced in the sediments and the deepest section of the hypolimnion. We concluded that there was no CH₄ exchange between the hypolimnion (dominated by methanotrophy and methanogenesis) and the epilimnion (dominated by methane lateral transport and/or oxic production), resulting in a vertically segregated lake internal CH₄ cycle.

Linking permafrost thaw to shifting biogeochemistry and food web resources in an arctic river

Rapidly, increasing air temperatures across the Arctic are thawing permafrost and exposing vast quantities of organic carbon, nitrogen, and phosphorus to microbial processing. Shifts in the absolute and relative supplies of these elements will likely alter patterns of ecosystem productivity and change the way carbon and nutrients are delivered from upland areas to surface waters such as rivers and lakes. The ultra-oligotrophic nature of surface waters across the Arctic renders these ecosystems particularly susceptible to changes in productivity and food web dynamics as permafrost thaw alters terrestrial-aquatic linkages. The objectives of this study were to evaluate decadal-scale patterns in surface water chemistry and assess potential implications of changing water chemistry to benthic organic matter and aquatic food webs. Data were collected from the upper Kuparuk River on the North Slope of Alaska by the U.S. National Science Foundation's Long-Term Ecological Research program during 1978-2014. Analyses of these data show increases in stream water alkalinity and cation concentrations consistent with signatures of permafrost thaw. Changes are also documented for discharge-corrected nitrate concentrations (+), discharge-corrected dissolved organic carbon concentrations (-), total phosphorus concentrations (-), and δ¹³ C isotope values of aquatic invertebrate consumers (-). These changes show that warming temperatures and thawing permafrost in the upland environment are leading to shifts in the supply of carbon and nutrients available to surface waters and consequently changing resources that support aquatic food webs. This demonstrates that physical, geochemical, and biological changes associated with warming permafrost are fundamentally altering linkages between upland and aquatic ecosystems in rapidly changing arctic environments.

Synthesizing the Effects of Submarine Groundwater Discharge on Marine Biota

Submarine groundwater discharge (SGD) is a global and well-studied geological process by which groundwater of varying salinities enters coastal waters. SGD is known to transport bioactive solutes, including but not limited to nutrients (nitrogen, phosphorous, silica), gases (methane, carbon dioxide), and trace metals (iron, nickel, zinc). In addition, physical changes to the water column, such as changes in temperature and mixing can be caused by SGD. Therefore SGD influences both autotrophic and heterotrophic marine biota across all kingdoms of life. This paper synthesizes the current literature in which the impacts of SGD on marine biota were measured and observed by field, modeling, or laboratory studies. The review is grouped by organismal complexity: bacteria and phytoplankton, macrophytes (macroalgae and marine plants), animals, and ecosystem studies. Directions for future research about the impacts of SGD on marine life, including increasing the number of ecosystem assessment studies and including biological parameters in SGD flux studies, are also discussed.

Climate and permafrost effects on the chemistry and ecosystems of High Arctic Lakes

Permafrost exerts an important control over hydrological processes in Arctic landscapes and lakes. Recent warming and summer precipitation has the potential to alter water availability and quality in this environment through thermal perturbation of near surface permafrost and increased mobility of previously frozen solutes to Arctic freshwaters. We present a unique thirteen-year record (2003–16) of the physiochemical properties of two High Arctic lakes and show that the concentration of major ions, especially SO₄²⁻, has rapidly increased up to 500% since 2008. This hydrochemical change has occurred synchronously in both lakes and ionic ratio changes in the lakes indicate that the source for the SO₄²⁻ is compositionally similar to terrestrial sources arising from permafrost thaw. Record summer temperatures during this period (2003–16) following over 100 years of warming and summer precipitation in this polar desert environment provide likely mechanisms for this rapid chemical change. An abrupt limnological change is also reflected in the otolith chemistry and improved relative condition of resident Arctic char (Salvelinus alpinus) and increased diatom diversity point to a positive ecosystem response during the same period.

Inland waters and their role in the carbon cycle of Alaska

The magnitude of Alaska (AK) inland waters carbon (C) fluxes is likely to change in the future due to amplified climate warming impacts on the hydrology and biogeochemical processes in high latitude regions. Although current estimates of major aquatic C fluxes represent an essential baseline against which future change can be compared, a comprehensive assessment for AK has not yet been completed. To address this gap, we combined available data sets and applied consistent methodologies to estimate river lateral C export to the coast, river and lake carbon dioxide (CO₂ ) and methane (CH₄ ) emissions, and C burial in lakes for the six major hydrologic regions in the state. Estimated total aquatic C flux for AK was 41 Tg C/yr. Major components of this total flux, in Tg C/yr, were 18 for river lateral export, 17 for river CO₂ emissions, and 8 for lake CO₂ emissions. Lake C burial offset these fluxes by 2 Tg C/yr. River and lake CH₄ emissions were 0.03 and 0.10 Tg C/yr, respectively. The Southeast and South central regions had the highest temperature, precipitation, terrestrial net primary productivity (NPP), and C yields (fluxes normalized to land area) were 77 and 42 g C·m^-2 ·yr^-1 , respectively. Lake CO₂ emissions represented over half of the total aquatic flux from the Southwest (37 g C·m^-2 ·yr^-1 ). The North Slope, Northwest, and Yukon regions had lesser yields (11, 15, and 17 g C·m² ·yr^-1 ), but these estimates may be the most vulnerable to future climate change, because of the heightened sensitivity of arctic and boreal ecosystems to intensified warming. Total aquatic C yield for AK was 27 g C·m^-2 ·yr^-1 , which represented 16% of the estimated terrestrial NPP. Freshwater ecosystems represent a significant conduit for C loss, and a more comprehensive view of land-water-atmosphere interactions is necessary to predict future climate change impacts on the Alaskan ecosystem C balance.

Ancient dissolved methane in inland waters revealed by a new collection method at low field concentrations for radiocarbon (14C) analysis

Methane (CH₄) is a powerful greenhouse gas that plays a prominent role in the terrestrial carbon (C) cycle, and is released to the atmosphere from freshwater systems in numerous biomes globally. Radiocarbon (¹⁴C) analysis can indicate both the age and source of CH₄ in natural environments. In contrast to CH₄ present in bubbles released from aquatic sediments (ebullition), dissolved CH₄ in lakes and streams can be present in low concentrations compared to carbon dioxide (CO₂), and therefore obtaining sufficient aquatic CH₄ for radiocarbon (¹⁴C) analysis remains a major technical challenge. Previous studies have shown that freshwater CH₄, in both dissolved and ebullitive form, can be significantly older than other forms of aquatic C, and it is therefore important to characterise this part of the terrestrial C balance. This study presents a novel method to capture sufficient amounts of dissolved CH₄ for ¹⁴C analysis in freshwater environments by circulating water across a hydrophobic, gas-permeable membrane and collecting the CH₄ in a large headspace volume. The results of laboratory and field tests show that reliable dissolved δ¹³CH₄ and ¹⁴CH₄ samples can be readily collected over short time periods (∼4-24 h), at relatively low cost and from a variety of surface water types. The initial results further support previous findings that dissolved CH₄ may be significantly older than other forms of aquatic C, and is currently unaccounted for in many terrestrial C balances and models. This method is suitable for use in remote locations, and could potentially be used to detect the leakage of unique ¹⁴CH₄ signatures from point sources into waterways, e.g. coal seam gas and landfill gas.

Factors Controlling Methane in Arctic Lakes of Southwest Greenland

We surveyed 15 lakes during the growing season of 2014 in Arctic lakes of southwest Greenland to determine which factors influence methane concentrations in these systems. Methane averaged 2.5 μmol L^-1 in lakes, but varied a great deal across the landscape with lakes on older landscapes farther from the ice sheet margin having some of the highest values of methane reported in lakes in the northern hemisphere (125 μmol L^-1). The most important factors influencing methane in Greenland lakes included ionic composition (SO₄, Na, Cl) and chlorophyll a in the water column. DOC concentrations were also related to methane, but the short length of the study likely underestimated the influence and timing of DOC on methane concentrations in the region. Atmospheric methane concentrations are increasing globally, with freshwater ecosystems in northern latitudes continuing to serve as potentially large sources in the future. Much less is known about how freshwater lakes in Greenland fit in the global methane budget compared to other, more well-studied areas of the Arctic, hence our work provides essential data for a more complete view of this rapidly changing region.

Current Magnitude and Mechanisms of Groundwater Discharge in the Arctic: Case Study from Alaska

To better understand groundwater-surface water dynamics in high latitude areas, we conducted a field study at three sites in Alaska with varying permafrost coverage. The natural groundwater tracer ((222)Rn, radon) was used to evaluate groundwater discharge, and electrical resistivity tomography (ERT) was used to examine subsurface mixing dynamics. Different controls govern groundwater discharge at these sites. In areas with sporadic permafrost (Kasitsna Bay), the major driver of submarine groundwater discharge is tidal pumping, due to the large tidal oscillations, whereas at Point Barrow, a site with continuous permafrost and small tidal amplitudes, fluxes are mostly affected by seasonal permafrost thawing. Extended areas of low resistivity in the subsurface alongshore combined with high radon in surface water suggests that groundwater-surface water interactions might enhance heat transport into deeper permafrost layers promoting permafrost thawing, thereby enhancing groundwater discharge.

High Methylmercury in Arctic and Subarctic Ponds is Related to Nutrient Levels in the Warming Eastern Canadian Arctic

Permafrost thaw ponds are ubiquitous in the eastern Canadian Arctic, yet little information exists on their potential as sources of methylmercury (MeHg) to freshwaters. They are microbially active and conducive to methylation of inorganic mercury, and are also affected by Arctic warming. This multiyear study investigated thaw ponds in a discontinuous permafrost region in the Subarctic taiga (Kuujjuarapik-Whapmagoostui, QC) and a continuous permafrost region in the Arctic tundra (Bylot Island, NU). MeHg concentrations in thaw ponds were well above levels measured in most freshwater ecosystems in the Canadian Arctic (>0.1 ng L(-1)). On Bylot, ice-wedge trough ponds showed significantly higher MeHg (0.3-2.2 ng L(-1)) than polygonal ponds (0.1-0.3 ng L(-1)) or lakes (<0.1 ng L(-1)). High MeHg was measured in the bottom waters of Subarctic thaw ponds near Kuujjuarapik (0.1-3.1 ng L(-1)). High water MeHg concentrations in thaw ponds were strongly correlated with variables associated with high inputs of organic matter (DOC, a320, Fe), nutrients (TP, TN), and microbial activity (dissolved CO2 and CH4). Thawing permafrost due to Arctic warming will continue to release nutrients and organic carbon into these systems and increase ponding in some regions, likely stimulating higher water concentrations of MeHg. Greater hydrological connectivity from permafrost thawing may potentially increase transport of MeHg from thaw ponds to neighboring aquatic ecosystems.