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Stin V, Godoy-Diana R, Bonnet X, Herrel A. Form and function of anguilliform swimming. Biol Rev Camb Philos Soc 2024; 99:2190-2210. [PMID: 39004428 DOI: 10.1111/brv.13116] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2024] [Revised: 06/18/2024] [Accepted: 06/19/2024] [Indexed: 07/16/2024]
Abstract
Anguilliform swimmers are long and narrow animals that propel themselves by undulating their bodies. Observations in nature and recent investigations suggest that anguilliform swimming is highly efficient. However, understanding the underlying reasons for the efficiency of this type of locomotion requires interdisciplinary studies spanning from biology to hydrodynamics. Regrettably, these different fields are rarely discussed together, which hinders our ability to understand the repeated evolution of this swimming mode in vertebrates. This review compiles the current knowledge of the anatomical features that drive anguilliform swimming, compares the resulting kinematics across a wide range of anguilliform swimmers, and describes the resulting hydrodynamic interactions using data from both in vivo experiments and computational studies.
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Affiliation(s)
- Vincent Stin
- UMR 7636, PMMH, CNRS, ESPCI Paris-PSL, Sorbonne Université, Université Paris Cité, 7 Quai Saint-Bernard, Paris, 75005, France
- Département Adaptation du Vivant, UMR 7179 MECADEV, MNHN/CNRS, 43 rue Buffon, Paris, 75005, France
| | - Ramiro Godoy-Diana
- UMR 7636, PMMH, CNRS, ESPCI Paris-PSL, Sorbonne Université, Université Paris Cité, 7 Quai Saint-Bernard, Paris, 75005, France
| | - Xavier Bonnet
- UMR 7372 Centre d'Etude Biologique de Chizé, CNRS, 405 Route de Prissé la Charrière, Villiers-en-Bois, 79360, France
| | - Anthony Herrel
- Département Adaptation du Vivant, UMR 7179 MECADEV, MNHN/CNRS, 43 rue Buffon, Paris, 75005, France
- Department of Biology, Evolutionary Morphology of Vertebrates, Ghent University, K.L. Ledeganckstraat 35, Ghent, 9000, Belgium
- Department of Biology, University of Antwerp, Universiteitsplein 1, Wilrijk, 2610, Belgium
- Naturhistorisches Museum Bern, Bernastrasse 15, Bern, 3005, Switzerland
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2
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Pan Y, Lauder GV. Combining Computational Fluid Dynamics and Experimental Data to Understand Fish Schooling Behavior. Integr Comp Biol 2024; 64:753-768. [PMID: 38760887 DOI: 10.1093/icb/icae044] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2024] [Revised: 05/12/2024] [Accepted: 05/14/2024] [Indexed: 05/20/2024] Open
Abstract
Understanding the flow physics behind fish schooling poses significant challenges due to the difficulties in directly measuring hydrodynamic performance and the three-dimensional, chaotic, and complex flow structures generated by collective moving organisms. Numerous previous simulations and experiments have utilized computational, mechanical, or robotic models to represent live fish. And existing studies of live fish schools have contributed significantly to dissecting the complexities of fish schooling. But the scarcity of combined approaches that include both computational and experimental studies, ideally of the same fish schools, has limited our ability to understand the physical factors that are involved in fish collective behavior. This underscores the necessity of developing new approaches to working directly with live fish schools. An integrated method that combines experiments on live fish schools with computational fluid dynamics (CFD) simulations represents an innovative method of studying the hydrodynamics of fish schooling. CFD techniques can deliver accurate performance measurements and high-fidelity flow characteristics for comprehensive analysis. Concurrently, experimental approaches can capture the precise locomotor kinematics of fish and offer additional flow information through particle image velocimetry (PIV) measurements, potentially enhancing the accuracy and efficiency of CFD studies via advanced data assimilation techniques. The flow patterns observed in PIV experiments with fish schools and the complex hydrodynamic interactions revealed by integrated analyses highlight the complexity of fish schooling, prompting a reevaluation of the classic Weihs model of school dynamics. The synergy between CFD models and experimental data grants us comprehensive insights into the flow dynamics of fish schools, facilitating the evaluation of their functional significance and enabling comparative studies of schooling behavior. In addition, we consider the challenges in developing integrated analytical methods and suggest promising directions for future research.
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Affiliation(s)
- Yu Pan
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA
- Museum of Comparative Zoology, Harvard University, Cambridge, MA 02138, USA
| | - George V Lauder
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA
- Museum of Comparative Zoology, Harvard University, Cambridge, MA 02138, USA
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3
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Agha MA, Kishore S, McLean DL. Cell-type-specific origins of locomotor rhythmicity at different speeds in larval zebrafish. eLife 2024; 13:RP94349. [PMID: 39287613 PMCID: PMC11407768 DOI: 10.7554/elife.94349] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/19/2024] Open
Abstract
Different speeds of locomotion require heterogeneous spinal populations, but a common mode of rhythm generation is presumed to exist. Here, we explore the cellular versus synaptic origins of spinal rhythmicity at different speeds by performing electrophysiological recordings from premotor excitatory interneurons in larval zebrafish. Chx10-labeled V2a neurons are divided into at least two morphological subtypes proposed to play distinct roles in timing and intensity control. Consistent with distinct rhythm generating and output patterning functions within the spinal V2a population, we find that descending subtypes are recruited exclusively at slow or fast speeds and exhibit intrinsic cellular properties suitable for rhythmogenesis at those speeds, while bifurcating subtypes are recruited more reliably at all speeds and lack appropriate rhythmogenic cellular properties. Unexpectedly, however, phasic firing patterns during locomotion in rhythmogenic and non-rhythmogenic V2a neurons alike are best explained by distinct modes of synaptic inhibition linked to cell type and speed. At fast speeds reciprocal inhibition in descending V2a neurons supports phasic firing, while recurrent inhibition in bifurcating V2a neurons helps pattern motor output. In contrast, at slow speeds recurrent inhibition in descending V2a neurons supports phasic firing, while bifurcating V2a neurons rely on reciprocal inhibition alone to pattern output. Our findings suggest cell-type-specific, not common, modes of rhythmogenesis generate and coordinate different speeds of locomotion.
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Affiliation(s)
- Moneeza A Agha
- Department of Neurobiology, Northwestern UniversityEvanstonUnited States
- Interdisciplinary Biological Sciences Graduate Program, Northwestern UniversityEvanstonUnited States
| | - Sandeep Kishore
- Department of Neurobiology, Northwestern UniversityEvanstonUnited States
| | - David L McLean
- Department of Neurobiology, Northwestern UniversityEvanstonUnited States
- Interdisciplinary Biological Sciences Graduate Program, Northwestern UniversityEvanstonUnited States
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Schuitema O, Motta PJ, Gelsleichter J, Horton M, Habegger ML. Histological comparison of shark dermis across various ecomorphologies. Anat Rec (Hoboken) 2024. [PMID: 39185549 DOI: 10.1002/ar.25568] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2024] [Revised: 08/08/2024] [Accepted: 08/09/2024] [Indexed: 08/27/2024]
Abstract
The integument plays essential roles in the structural support, protection, and hydrodynamic capability among fishes. Most research on shark skin has focused on the external epidermal layer, while the larger dermis anchoring the dermal denticles has been mostly ignored. Shark dermis is composed of two layers, the upper stratum laxum and the lower stratum compactum, holding supportive collagen and elastic fibers. There may be morphological and compositional differences in the dermis across various species of sharks that could relate to their different swimming modes and ecologies. The goal of this study was to characterize and describe the dermis among three shark species, Ginglymostoma cirratum, Sphyrna mokarran, and Isurus oxyrinchus, each representing a different swimming mode. Histological characterizations were performed at 16 locations along the body of each shark; variables such as dermal thickness, abundance of collagen and elastic fibers, and fiber size were quantified. Results showed G. cirratum has the thickest skin overall, and the largest fiber size for both collagen and elastic fibers, with overall patterns of increased amounts of collagen fibers and decreased amount of elastic fibers. At the opposite end of the spectrum, I. oxyrinchus showed the thinnest dermis along the flank region, with overall patterns of increased elastic fibers and decreased collagen fibers. These findings may challenge our original assumptions of a rigid body in fast moving sharks and a more flexible body in slower moving sharks and highlight the diversity of the shark integument.
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Agha MA, Kishore S, McLean DL. Cell-type-specific origins of locomotor rhythmicity at different speeds in larval zebrafish. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.01.11.575271. [PMID: 38260357 PMCID: PMC10802601 DOI: 10.1101/2024.01.11.575271] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/24/2024]
Abstract
Different speeds of locomotion require heterogeneous spinal populations, but a common mode of rhythm generation is presumed to exist. Here, we explore the cellular versus synaptic origins of spinal rhythmicity at different speeds by performing electrophysiological recordings from premotor excitatory interneurons in larval zebrafish. Chx10-labeled V2a neurons are divided into at least two morphological subtypes proposed to play distinct roles in timing and intensity control. Consistent with distinct rhythm generating and output patterning functions within the spinal V2a population, we find that descending subtypes are recruited exclusively at slow or fast speeds and exhibit intrinsic cellular properties suitable for rhythmogenesis at those speeds, while bifurcating subtypes are recruited more reliably at all speeds and lack appropriate rhythmogenic cellular properties. Unexpectedly, however, phasic firing patterns during locomotion in rhythmogenic and non-rhythmogenic V2a neurons alike are best explained by distinct modes of synaptic inhibition linked to cell-type and speed. At fast speeds reciprocal inhibition in descending V2a neurons supports phasic firing, while recurrent inhibition in bifurcating V2a neurons helps pattern motor output. In contrast, at slow speeds recurrent inhibition in descending V2a neurons supports phasic firing, while bifurcating V2a neurons rely on reciprocal inhibition alone to pattern output. Our findings suggest cell-type-specific, not common, modes of rhythmogenesis generate and coordinate different speeds of locomotion.
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Liu S, Cao C, Xi Y, Li P, Chen X, Xiao L, Yao W. Morphology and motor behavior of endemic fishes in the upper reaches of the Yangtze River basin. JOURNAL OF FISH BIOLOGY 2024; 104:1350-1365. [PMID: 38332499 DOI: 10.1111/jfb.15670] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2023] [Revised: 01/07/2024] [Accepted: 01/14/2024] [Indexed: 02/10/2024]
Abstract
Dam construction alters the hydrodynamic conditions, consequently impacting the swimming behavior of fish. To explore the effect of flow hydrodynamics on fish swimming behavior, five endemic fish species in the upper Yangtze River basin were selected. Through high-speed video visualization and computer analysis, these species' swimming patterns under different flow velocities (0.1-1.2 m/s) were investigated. The kinematic and morphological characteristics of the fish were presented. The principal component analysis was used to analyse the main factors influencing the swimming ability of fish and to determine the correlation coefficients among fish behavior indicators. Fish exhibited three different swimming patterns under different flow velocities. Low velocity (0.1-0.3 m/s) corresponds to free motion, middle velocity (0.4-0.7 m/s) corresponds to cruising motion, and high velocity corresponds to stress motion (0.8-1.2 m/s). The fish kinematic index curves were obtained, and four of five fish species showed two extreme points, which means the optimal and adverse swimming strategies can be determined. With the increase in flow velocity, the tail-beat frequency showed an increasing trend, whereas the tail-beat angle and amplitude showed a decreasing trend. Morphological and kinematic parameters were the two main indexes that affect the swimming ability of fish, which accounts for 41.9% and 26.9%, respectively.
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Affiliation(s)
- Shikang Liu
- State Key Laboratory of Hydraulics and Mountain River Engineering, Sichuan University, Chengdu, China
| | - Chengyang Cao
- State Key Laboratory of Hydraulics and Mountain River Engineering, Sichuan University, Chengdu, China
| | - Yuqian Xi
- State Key Laboratory of Hydraulics and Mountain River Engineering, Sichuan University, Chengdu, China
| | - Pengcheng Li
- Department of Civil and Environmental Engineering, University of Alberta, Edmonton, Alberta, Canada
| | - Xuefeng Chen
- State Key Laboratory of Hydraulics and Mountain River Engineering, Sichuan University, Chengdu, China
| | - Lirong Xiao
- State Key Laboratory of Hydraulics and Mountain River Engineering, Sichuan University, Chengdu, China
| | - Weiwei Yao
- State Key Laboratory of Hydraulics and Mountain River Engineering, Sichuan University, Chengdu, China
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Sparks DM, Rajeev E, Canestrelli A, Liao JC. Swimming kinematics of rainbow trout behind cylinder arrays: the effect of vortex street periodicity and turbulence kinetic energy. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.04.15.589564. [PMID: 38659755 PMCID: PMC11042337 DOI: 10.1101/2024.04.15.589564] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/26/2024]
Abstract
Fish in the wild often contend with complex flows that are produced by natural and artificial structures. Research into fish interactions with turbulence often investigates metrics such as turbulence kinetic energy (TKE) or fish positional location, with less attention paid to the specific interactions between vortex organization and body swimming kinematics. Here we compare the swimming kinematics of rainbow trout ( Oncorhynchus mykiss ) holding station in flows produced by two different 3 x 5 cylinder arrays. We systematically utilized computational fluid dynamics to generate one array that produced a Kármán vortex street with high vortex periodicity and TKE (KVS array), and another that produced low periodicity and TKE, similar to a parallel vortex street (PVS array). The only difference in swimming kinematics between cylinder arrays was an increased tail beat amplitude in the KVS array. In both cylinder arrays, the tail beat frequency decreased and snout amplitude increased compared with the freestream. The center of mass amplitude was greater in the PVS array than in only the freestream, however, suggesting some buffeting of the body by the fluid. Notably, we did not observe Kármán gaiting in the KVS array as in previous studies. We hypothesize that this is because (1) vorticity was dissipated in the region where fish held station in this study and (2) cylinder arrays produced vortices that were in-line rather than staggered. These results are the first to quantify the kinematics and behavior of fishes swimming in the wake of multiple cylinder arrays, which has important implications for biomechanics, fluid dynamics, and fisheries management. SUMMARY STATEMENT The swimming kinematics of rainbow trout are largely preserved across two, 3 x 5 cylinder array treatments that differed in vortex periodicity and turbulence kinetic energy.
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Deng H, Li D, Nitroy C, Wertz A, Priya S, Cheng B. Robot motor learning shows emergence of frequency-modulated, robust swimming with an invariant Strouhal number. J R Soc Interface 2024; 21:20240036. [PMID: 38531411 PMCID: PMC10965329 DOI: 10.1098/rsif.2024.0036] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2024] [Accepted: 03/01/2024] [Indexed: 03/28/2024] Open
Abstract
Fish locomotion emerges from diverse interactions among deformable structures, surrounding fluids and neuromuscular activations, i.e. fluid-structure interactions (FSI) controlled by fish's motor systems. Previous studies suggested that such motor-controlled FSI may possess embodied traits. However, their implications in motor learning, neuromuscular control, gait generation, and swimming performance remain to be uncovered. Using robot models, we studied the embodied traits in fish-inspired swimming. We developed modular robots with various designs and used central pattern generators (CPGs) to control the torque acting on robot body. We used reinforcement learning to learn CPG parameters for maximizing the swimming speed. The results showed that motor frequency converged faster than other parameters, and the emergent swimming gaits were robust against disruptions applied to motor control. For all robots and frequencies tested, swimming speed was proportional to the mean undulation velocity of body and caudal-fin combined, yielding an invariant, undulation-based Strouhal number. The Strouhal number also revealed two fundamental classes of undulatory swimming in both biological and robotic fishes. The robot actuators were also demonstrated to function as motors, virtual springs and virtual masses. These results provide novel insights in understanding fish-inspired locomotion.
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Affiliation(s)
- Hankun Deng
- Department of Mechanical Engineering, The Pennsylvania State University, University Park, PA 16802, USA
| | - Donghao Li
- Department of Mechanical Engineering, The Pennsylvania State University, University Park, PA 16802, USA
| | - Colin Nitroy
- Department of Mechanical Engineering, The Pennsylvania State University, University Park, PA 16802, USA
| | - Andrew Wertz
- Department of Mechanical Engineering, The Pennsylvania State University, University Park, PA 16802, USA
| | - Shashank Priya
- Department of Material Science and Engineering, The Pennsylvania State University, University Park, PA 16802, USA
| | - Bo Cheng
- Department of Mechanical Engineering, The Pennsylvania State University, University Park, PA 16802, USA
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Chen B, Zhang J, Meng Q, Dong H, Jiang H. Complex Modal Characteristic Analysis of a Tensegrity Robotic Fish's Body Waves. Biomimetics (Basel) 2023; 9:6. [PMID: 38248580 PMCID: PMC11154480 DOI: 10.3390/biomimetics9010006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2023] [Revised: 12/14/2023] [Accepted: 12/14/2023] [Indexed: 01/23/2024] Open
Abstract
A bionic robotic fish based on compliant structure can excite the natural modes of vibration, thereby mimicking the body waves of real fish to generate thrust and realize undulate propulsion. The fish body wave is a result of the fish body's mechanical characteristics interacting with the surrounding fluid. Thoroughly analyzing the complex modal characteristics in such robotic fish contributes to a better understanding of the locomotion behavior, consequently enhancing the swimming performance. Therefore, the complex orthogonal decomposition (COD) method is used in this article. The traveling index is used to quantitatively describe the difference between the real and imaginary modes of the fish body wave. It is defined as the reciprocal of the condition number between the real and imaginary components. After introducing the BCF (body and/or caudal fin) the fish's body wave curves and the COD method, the structural design and parameter configuration of the tensegrity robotic fish are introduced. The complex modal characteristics of the tensegrity robotic fish and real fish are analyzed. The results show that their traveling indexes are close, with two similar complex mode shapes. Subsequently, the relationship between the traveling index and swimming performance is expressed using indicators reflecting linear correlation (correlation coefficient (Rc) and p value). Based on this correlation, a preliminary optimization strategy for the traveling index is proposed, with the potential to improve the swimming performance of the robotic fish.
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Affiliation(s)
- Bingxing Chen
- School of Mechanical Engineering and Automation, Fuzhou University, Fuzhou 350108, China; (B.C.); (J.Z.); (Q.M.)
| | - Jie Zhang
- School of Mechanical Engineering and Automation, Fuzhou University, Fuzhou 350108, China; (B.C.); (J.Z.); (Q.M.)
| | - Qiuxu Meng
- School of Mechanical Engineering and Automation, Fuzhou University, Fuzhou 350108, China; (B.C.); (J.Z.); (Q.M.)
| | - Hui Dong
- School of Mechanical Engineering and Automation, Fuzhou University, Fuzhou 350108, China; (B.C.); (J.Z.); (Q.M.)
| | - Hongzhou Jiang
- School of Mechatronics Engineering, Harbin Institute of Technology, Harbin 150001, China
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Wang J, Wang S, Zheng L, Ren L. Adhesion Behavior in Fish: From Structures to Applications. Biomimetics (Basel) 2023; 8:534. [PMID: 37999175 PMCID: PMC10669881 DOI: 10.3390/biomimetics8070534] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2023] [Revised: 11/04/2023] [Accepted: 11/06/2023] [Indexed: 11/25/2023] Open
Abstract
In nature, some fish can adhere tightly to the surface of stones, aquatic plants, and even other fish bodies. This adhesion behavior allows these fish to fix, eat, hide, and migrate in complex and variable aquatic environments. The adhesion function is realized by the special mouth and sucker tissue of fish. Inspired by adhesion fish, extensive research has recently been carried out. Therefore, this paper presents a brief overview to better explore underwater adhesion mechanisms and provide bionic applications. Firstly, the adhesion organs and structures of biological prototypes (e.g., clingfish, remora, Garra, suckermouth catfish, hill stream loach, and goby) are presented separately, and the underwater adhesion mechanisms are analyzed. Then, based on bionics, it is explained that the adhesion structures and components are designed and created for applications (e.g., flexible gripping adhesive discs and adhesive motion devices). Furthermore, we offer our perspectives on the limitations and future directions.
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Affiliation(s)
- Jinhao Wang
- Key Laboratory of Bionic Engineering, Ministry of Education, Jilin University, Changchun 130022, China; (J.W.); (L.R.)
- School of Mechanical and Electrical Engineering, Changchun University of Science and Technology, Changchun 130022, China;
- Weihai Institute for Bionics, Jilin University, Weihai 264402, China
| | - Shukun Wang
- School of Mechanical and Electrical Engineering, Changchun University of Science and Technology, Changchun 130022, China;
| | - Long Zheng
- Key Laboratory of Bionic Engineering, Ministry of Education, Jilin University, Changchun 130022, China; (J.W.); (L.R.)
- Weihai Institute for Bionics, Jilin University, Weihai 264402, China
| | - Luquan Ren
- Key Laboratory of Bionic Engineering, Ministry of Education, Jilin University, Changchun 130022, China; (J.W.); (L.R.)
- Weihai Institute for Bionics, Jilin University, Weihai 264402, China
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Pazzaglia UE, Reguzzoni M, Manconi R, Lanteri L, Zarattini G, Zecca PA, Raspanti M. Fin systems comparative anatomy in model Batoidea Raja asterias and Torpedo marmorata: Insights and relatioships between musculo-skeletal layout, locomotion and morphology. J Anat 2023; 243:605-617. [PMID: 37125509 PMCID: PMC10485587 DOI: 10.1111/joa.13881] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2022] [Revised: 02/28/2023] [Accepted: 04/10/2023] [Indexed: 05/02/2023] Open
Abstract
The macroscopic and microscopic morphology of the appendicular skeleton was studied in the two species Raja asterias (order Rajiformes) and Torpedo marmorata (Order Torpediniformes), comparing the organization and structural layout of pectoral, pelvic, and tail fin systems. The shape, surface area and portance of the T. marmorata pectoral fin system (hydrodynamic lift) were conditioned by the presence of the two electric organs in the disk central part, which reduced the pectoral fin surface area, suggesting a lower efficiency of the "flapping effectors" than those of R. asterias. Otherwise, radials' rays alignment, morphology and calcification pattern showed in both species the same structural layout characterized in the fin medial zone by stiffly paired columns of calcified tiles in the perpendicular plane to the flat batoid body, then revolving and in the horizontal plane to continue as separate mono-columnar rays in the fin lateral zone with a morphology suggesting fin stiffness variance between medial/lateral zone. Pelvic fins morphology was alike in the two species, however with different calcified tiles patterns of the 1st compound radial and pterygia in respect to the fin-rays articulating perpendicularly to the latter, whose tile rows lay-out was also different from that of the pectoral fins radials. The T. marmorata tail-caudal fin showed a muscular and connective scaffold capable of a significant oscillatory forward thrust. On the contrary, the R. asterias dorsal tail fins were stiffened by a scaffold of radials-like calcified segments. Histomorphology, heat-deproteination technique and morphometry provided new data on the wing-fins structural layout which can be correlated to the mechanics of the Batoid swimming behavior and suggested a cartilage-calcification process combining interstitial cartilage growth (as that of all vertebrates anlagen) and a mineral deposition with accretion of individual centers (the tiles). The resulting layout showed scattered zones of un-mineralized matrix within the calcified mass and a less compact texture of the matrix calcified fibers suggesting a possible way of fluid diffusion throughout the mineralized tissue. These observations could explain the survival of the embedded chondrocytes in absence of a canalicular system as that of the cortical bone.
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Affiliation(s)
- Ugo E. Pazzaglia
- DSMCUniversity of BresciaBresciaItaly
- DMCUniversity of InsubriaVareseItaly
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Ko H, Lauder G, Nagpal R. The role of hydrodynamics in collective motions of fish schools and bioinspired underwater robots. J R Soc Interface 2023; 20:20230357. [PMID: 37876271 PMCID: PMC10598440 DOI: 10.1098/rsif.2023.0357] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Accepted: 10/02/2023] [Indexed: 10/26/2023] Open
Abstract
Collective behaviour defines the lives of many animal species on the Earth. Underwater swarms span several orders of magnitude in size, from coral larvae and krill to tunas and dolphins. Agent-based algorithms have modelled collective movements of animal groups by use of social forces, which approximate the behaviour of individual animals. But details of how swarming individuals interact with the fluid environment are often under-examined. How do fluid forces shape aquatic swarms? How do fish use their flow-sensing capabilities to coordinate with their schooling mates? We propose viewing underwater collective behaviour from the framework of fluid stigmergy, which considers both physical interactions and information transfer in fluid environments. Understanding the role of hydrodynamics in aquatic collectives requires multi-disciplinary efforts across fluid mechanics, biology and biomimetic robotics. To facilitate future collaborations, we synthesize key studies in these fields.
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Affiliation(s)
- Hungtang Ko
- Mechanical and Aerospace Engineering, Princeton University, Princeton, NJ, USA
| | - George Lauder
- Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA
| | - Radhika Nagpal
- Mechanical and Aerospace Engineering, Princeton University, Princeton, NJ, USA
- Computer Science, Princeton University, Princeton, NJ, USA
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13
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Berio F, Morerod C, Qi X, Di Santo V. Ontogenetic Plasticity in Shoaling Behavior in a Forage Fish under Warming. Integr Comp Biol 2023; 63:730-741. [PMID: 37245064 PMCID: PMC10503471 DOI: 10.1093/icb/icad043] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2023] [Revised: 05/10/2023] [Accepted: 05/16/2023] [Indexed: 05/29/2023] Open
Abstract
Shoaling behavior is known to increase survival rates during attacks from predators, minimize foraging time, favor mating, and potentially increase locomotor efficiency. The onset of shoaling typically occurs during the larval phase, but it is unclear how it may improve across ontogenetic stages in forage fishes. Warming is known to increase metabolic rates during locomotion in solitary fish, and shoaling species may adjust their collective behavior to offset the elevated costs of swimming at higher temperatures. In this study, we quantified the effects of warming on shoaling performance across the ontogeny of a small forage fish, zebrafish (Danio rerio) at different speeds. Shoals of larval, juvenile, and adult zebrafish were acclimated at two temperatures (28°C and 32°C), and metabolic rates were quantified prior to and following nonexhaustive exercise at high speed. Shoals of five individuals were filmed in a flow tank to analyze the kinematics of collective movement. We found that zebrafish improve shoaling swimming performance from larvae to juveniles to adults. In particular, shoals become more cohesive, and both tail beat frequency (TBF) and head-to-tail amplitude decrease with ontogeny. Early life stages have higher thermal sensitivity in metabolic rates and TBF especially at high speeds, when compared to adults. Our study shows that shoaling behavior and thermal sensitivity improve as zebrafish shift from larval to juvenile to adult stages.
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Affiliation(s)
- Fidji Berio
- Department of Zoology, Stockholm University, Svante Arrhenius väg 18B, 114 18, Stockholm, Sweden
| | - Camille Morerod
- Department of Zoology, Stockholm University, Svante Arrhenius väg 18B, 114 18, Stockholm, Sweden
| | - Xuewei Qi
- Department of Zoology, Stockholm University, Svante Arrhenius väg 18B, 114 18, Stockholm, Sweden
| | - Valentina Di Santo
- Department of Zoology, Stockholm University, Svante Arrhenius väg 18B, 114 18, Stockholm, Sweden
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Anastasiadis A, Paez L, Melo K, Tytell ED, Ijspeert AJ, Mulleners K. Identification of the trade-off between speed and efficiency in undulatory swimming using a bio-inspired robot. Sci Rep 2023; 13:15032. [PMID: 37699939 PMCID: PMC10497532 DOI: 10.1038/s41598-023-41074-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2023] [Accepted: 08/21/2023] [Indexed: 09/14/2023] Open
Abstract
Anguilliform swimmers, like eels or lampreys, are highly efficient swimmers. Key to understanding their performances is the relationship between the body's kinematics and resulting swimming speed and efficiency. But, we cannot prescribe kinematics to living fish, and it is challenging to measure their power consumption. Here, we characterise the swimming speed and cost of transport of a free-swimming undulatory bio-inspired robot as we vary its kinematic parameters, including joint amplitude, body wavelength, and frequency. We identify a trade-off between speed and efficiency. Speed, in terms of stride length, increases for increasing maximum tail angle, described by the newly proposed specific tail amplitude and reaches a maximum value around the specific tail amplitude of unity. Efficiency, in terms of the cost of transport, is affected by the whole-body motion. Cost of transport decreases for increasing travelling wave-like kinematics, and lower specific tail amplitudes. Our results suggest that live eels tend to choose efficiency over speed and provide insights into the key characteristics affecting undulatory swimming performance.
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Affiliation(s)
- Alexandros Anastasiadis
- Unsteady Flow Diagnostics Laboratory, Institute of Mechanical Engineering, École Polytechnique Fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland
- Biorobotics Laboratory, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland
| | - Laura Paez
- Biorobotics Laboratory, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland
| | | | - Eric D Tytell
- Department of Biology, Tufts University, Medford, MA, 02155, USA
| | - Auke J Ijspeert
- Biorobotics Laboratory, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland
| | - Karen Mulleners
- Unsteady Flow Diagnostics Laboratory, Institute of Mechanical Engineering, École Polytechnique Fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland.
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15
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Sánchez-Rodríguez J, Raufaste C, Argentina M. Scaling the tail beat frequency and swimming speed in underwater undulatory swimming. Nat Commun 2023; 14:5569. [PMID: 37689714 PMCID: PMC10492801 DOI: 10.1038/s41467-023-41368-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2023] [Accepted: 09/01/2023] [Indexed: 09/11/2023] Open
Abstract
Undulatory swimming is the predominant form of locomotion in aquatic vertebrates. A myriad of animals of different species and sizes oscillate their bodies to propel themselves in aquatic environments with swimming speed scaling as the product of the animal length by the oscillation frequency. Although frequency tuning is the primary means by which a swimmer selects its speed, there is no consensus on the mechanisms involved. In this article, we propose scaling laws for undulatory swimmers that relate oscillation frequency to length by taking into account both the biological characteristics of the muscles and the interaction of the moving swimmer with its environment. Results are supported by an extensive literature review including approximately 1200 individuals of different species, sizes and swimming environments. We highlight a crossover in size around 0.5-1 m. Below this value, the frequency can be tuned between 2-20 Hz due to biological constraints and the interplay between slow and fast muscles. Above this value, the fluid-swimmer interaction must be taken into account and the frequency is inversely proportional to the length of the animal. This approach predicts a maximum swimming speed around 5-10 m.s-1 for large swimmers, consistent with the threshold to prevent bubble cavitation.
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Affiliation(s)
- Jesús Sánchez-Rodríguez
- Université Côte d'Azur, CNRS, INPHYNI, 17 Rue Julien Lauprêtre, Nice, 06200, France
- Departamento de Física Fundamental, Universidad Nacional de Educación a Distancia, Madrid, 28040, Spain
- Laboratory of Fluid Mechanics and Instabilities, École Polytechnique Fédérale de Lausanne, Lausanne, CH-1015, Switzerland
| | - Christophe Raufaste
- Université Côte d'Azur, CNRS, INPHYNI, 17 Rue Julien Lauprêtre, Nice, 06200, France
- Institut Universitaire de France (IUF), 1 Rue Descartes, Paris, 75005, France
| | - Médéric Argentina
- Université Côte d'Azur, CNRS, INPHYNI, 17 Rue Julien Lauprêtre, Nice, 06200, France.
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16
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Abbaszadeh S, Kiiski Y, Leidhold R, Hoerner S. On the influence of head motion on the swimming kinematics of robotic fish. BIOINSPIRATION & BIOMIMETICS 2023; 18:056007. [PMID: 37557887 DOI: 10.1088/1748-3190/aceedb] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2023] [Accepted: 08/09/2023] [Indexed: 08/11/2023]
Abstract
Up to now bio-inspired fish-mimicking robots fail when competing with the swimming performance of real fish. While tail motion has been studied extensively, the influence of the head motion is still not fully understood and its active control is challenging. In this experimental study, we show that head yawing strongly impacts on the propulsion force and determines the optimal fin actuation amplitude and tail beat frequency when aiming for a maximal propulsion force. In a parametric experimental study on a tethered 367 mm long fish robot the pivot point location of the head yaw has been varied along with tail beat frequency and actuation amplitude. The experiments took place in a still water tank and the swimming force has been measured with a single axis load cell. The robot is actuated with non-conventional area actuators based on micro fiber composites. 105 parameter sets have been investigated while the highest pivot point distance of roughly 0.36 body length from the nose tip provided the highest propulsion force of 500 mN with the lowest actuation frequency of 2.5 Hz and the highest head motion amplitude of a magnitude of 0.18 body length. Even though the pivot point location on a free swimming robot is a consequence of the complex fluid-structure interactions of fish and fluid, the results provide valuable information for the design of fish mimicking robots and questions the paradigm that head yaw is a simple recoil effect from tail motion and has to be minimized for an effective propulsion.
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Affiliation(s)
- Shokoofeh Abbaszadeh
- Institute of Electric Power Systems, Otto von Guericke University Magdeburg, Universitätsplatz 2, 39106 Magdeburg, Germany
| | - Yanneck Kiiski
- Institute of Fluid Dynamics and Thermodynamics, Otto von Guericke University Magdeburg, Universitätsplatz 2, 39106 Magdeburg, Germany
| | - Roberto Leidhold
- Institute of Electric Power Systems, Otto von Guericke University Magdeburg, Universitätsplatz 2, 39106 Magdeburg, Germany
| | - Stefan Hoerner
- Institute of Fluid Dynamics and Thermodynamics, Otto von Guericke University Magdeburg, Universitätsplatz 2, 39106 Magdeburg, Germany
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17
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Guo J, Zhang W, Han P, Fish FE, Dong H. Thrust generation and propulsive efficiency in dolphin-like swimming propulsion. BIOINSPIRATION & BIOMIMETICS 2023; 18:056001. [PMID: 37414002 DOI: 10.1088/1748-3190/ace50b] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/21/2023] [Accepted: 07/06/2023] [Indexed: 07/08/2023]
Abstract
Given growing interest in emulating dolphin morphology and kinematics to design high-performance underwater vehicles, the current research effort is dedicated to studying the hydrodynamics of dolphin-like oscillatory kinematics in forward propulsion. A computational fluid dynamics method is used. A realistic three-dimentional surface model of a dolphin is made with swimming kinematics reconstructed from video recording. The oscillation of the dolphin is found to enhance the attachment of the boundary layer to the posterior body, which then leads to body drag reduction. The flapping motion of the flukes is found to generate high thrust forces in both the downstroke and the upstroke, during which vortex rings are shed to produce strong thrust jets. The downstroke jets are found to be on average stronger than the upstroke jet, which then leads to net positive lift production. The flexion of the peduncle and flukes is found to be a crucial feature of dolphin-like swimming kinematics. Dolphin-inspired swimming kinematics were created by varying the flexion angle of the peduncle and flukes, which then resulted in significant performance variation. The thrust benefits and propulsive efficiency benefits are associated with a slight decrease and slight increase of the flexion of the peduncle and flukes, respectively.
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Affiliation(s)
- Jiacheng Guo
- Mechanical and Aerospace Engineering, University of Virginia, Charlottesville, VA 22903, United States of America
| | - Wei Zhang
- Mechanical and Aerospace Engineering, University of Virginia, Charlottesville, VA 22903, United States of America
| | - Pan Han
- Mechanical and Aerospace Engineering, University of Virginia, Charlottesville, VA 22903, United States of America
| | - Frank E Fish
- Department of Biology, West Chester University, West Chester, PA 19383, United States of America
| | - Haibo Dong
- Mechanical and Aerospace Engineering, University of Virginia, Charlottesville, VA 22903, United States of America
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18
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Downs AM, Kolpas A, Block BA, Fish FE. Multiple behaviors for turning performance of Pacific bluefin tuna (Thunnus orientalis). J Exp Biol 2023; 226:jeb244144. [PMID: 36728637 DOI: 10.1242/jeb.244144] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2022] [Accepted: 01/21/2023] [Indexed: 02/03/2023]
Abstract
Tuna are known for exceptional swimming speeds, which are possible because of their thunniform lift-based propulsion, large muscle mass and rigid fusiform body. A rigid body should restrict maneuverability with regard to turn radius and turn rate. To test if turning maneuvers by the Pacific bluefin tuna (Thunnus orientalis) are constrained by rigidity, captive animals were videorecorded overhead as the animals routinely swam around a large circular tank or during feeding bouts. Turning performance was classified into three different types: (1) glide turns, where the tuna uses the caudal fin as a rudder; (2) powered turns, where the animal uses continuous near symmetrical strokes of the caudal fin through the turn; and (3) ratchet turns, where the overall global turn is completed by a series of small local turns by asymmetrical stokes of the caudal fin. Individual points of the rostrum, peduncle and tip of the caudal fin were tracked and analyzed. Frame-by-frame analysis showed that the ratchet turn had the fastest turn rate for all points with a maximum of 302 deg s-1. During the ratchet turn, the rostrum exhibited a minimum global 0.38 body length turn radius. The local turn radii were only 18.6% of the global ratchet turn. The minimum turn radii ranged from 0.4 to 1.7 body lengths. Compared with the performance of other swimmers, the increased flexion of the peduncle and tail and the mechanics of turning behaviors used by tuna overcomes any constraints to turning performance from the rigidity of the anterior body morphology.
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Affiliation(s)
- Abigail M Downs
- Department of Biology, West Chester University, West Chester, PA 19383, USA
| | - Allison Kolpas
- Department of Mathematics, West Chester University, West Chester, PA 19383, USA
| | - Barbara A Block
- Department of Biology, Hopkins Marine Station, Stanford University, Pacific Grove, CA 93905, USA
| | - Frank E Fish
- Department of Biology, West Chester University, West Chester, PA 19383, USA
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19
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Thandiackal R, Lauder G. In-line swimming dynamics revealed by fish interacting with a robotic mechanism. eLife 2023; 12:81392. [PMID: 36744863 PMCID: PMC10032654 DOI: 10.7554/elife.81392] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2022] [Accepted: 02/03/2023] [Indexed: 02/07/2023] Open
Abstract
Schooling in fish is linked to a number of factors such as increased foraging success, predator avoidance, and social interactions. In addition, a prevailing hypothesis is that swimming in groups provides energetic benefits through hydrodynamic interactions. Thrust wakes are frequently occurring flow structures in fish schools as they are shed behind swimming fish. Despite increased flow speeds in these wakes, recent modeling work has suggested that swimming directly in-line behind an individual may lead to increased efficiency. However, only limited data are available on live fish interacting with thrust wakes. Here we designed a controlled experiment in which brook trout, Salvelinus fontinalis, interact with thrust wakes generated by a robotic mechanism that produces a fish-like wake. We show that trout swim in thrust wakes, reduce their tail-beat frequencies, and synchronize with the robotic flapping mechanism. Our flow and pressure field analysis revealed that the trout are interacting with oncoming vortices and that they exhibit reduced pressure drag at the head compared to swimming in isolation. Together, these experiments suggest that trout swim energetically more efficiently in thrust wakes and support the hypothesis that swimming in the wake of one another is an advantageous strategy to save energy in a school.
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20
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Paniccia D, Padovani L, Graziani G, Piva R. Locomotion performance for oscillatory swimming in free mode. BIOINSPIRATION & BIOMIMETICS 2022; 18:015004. [PMID: 36322994 DOI: 10.1088/1748-3190/ac9fb4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2022] [Accepted: 11/01/2022] [Indexed: 06/16/2023]
Abstract
Oscillatory swimming of a fishlike body, whose motion is essentially promoted by the flapping tail, has been studied almost exclusively in axial mode under an incoming uniform stream or, more recently, self-propelled under a virtual body resistance. Obviously, both approaches do not consider the unavoidable recoil motions of the real body which have to be necessarily accounted for in a design procedure for technological means. Actually, once combined with the prescribed kinematics of the tail, the recoil motions lead to a remarkable improvement on the resulting swimming performance. An inviscid impulse model, linear in both potential and vortical contributions, is a proper tool to obtain a deeper comprehension of the physical events with respect to more elaborated flow interaction models. In fact, at a first look, the numerical results seem to be quite entangled, since their trends in terms of the main flapping parameters are not easy to be identified and a fair interpretation is obtained by means of the model capability to separate the effects of added mass and vortex shedding. Specifically, a prevailing dependence of the potential contribution on the heave amplitude and of the vortical contribution on the pitch amplitude is instrumental to unravel their combined action. A further aid for a proper interpretation of the data is provided by accounting separately for a geometrical component of the recoil which is expected to follow from the annihilation of any spurious rigid motion in case no fluid interactions occur. The above detailed decomposition of the recoil motions shows, through the numerical results, how the single components are going to influence the main flapping parameters and the locomotion performance as a guide for the design of biomimetic swimmers.
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Affiliation(s)
- D Paniccia
- Department of Mechanical and Aerospace Engineering, Sapienza University, Rome, Italy
| | - L Padovani
- Department of Mechanical and Aerospace Engineering, Sapienza University, Rome, Italy
| | - G Graziani
- Department of Mechanical and Aerospace Engineering, Sapienza University, Rome, Italy
| | - R Piva
- Department of Mechanical and Aerospace Engineering, Sapienza University, Rome, Italy
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21
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Di Santo V. EcoPhysioMechanics: Integrating energetics and biomechanics to understand fish locomotion under climate change. Integr Comp Biol 2022; 62:icac095. [PMID: 35759407 PMCID: PMC9494520 DOI: 10.1093/icb/icac095] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2022] [Revised: 06/05/2022] [Accepted: 06/13/2022] [Indexed: 11/15/2022] Open
Abstract
Ecological physiologists and biomechanists have been broadly investigating swimming performance in a diversity of fishes, however the connection between form, function and energetics of locomotion has been rarely evaluated in the same system and under climate change scenarios. In this perspective I argue that working within the framework of 'EcoPhysioMechanics', i.e., integrating energetics and biomechanics tools, to measure locomotor performance and behavior under different abiotic factors, improves our understanding of the mechanisms, limits and costs of movement. To demonstrate how ecophysiomechanics can be applied to locomotor studies, I outline how linking biomechanics and physiology allows us to understand how fishes may modulate their movement to achieve high speeds or reduce the costs of locomotion. I also discuss how the framework is necessary to quantify swimming capacity under climate change scenarios. Finally, I discuss current dearth of integrative studies and gaps in empirical datasets that are necessary to understand fish swimming under changing environments.
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Affiliation(s)
- Valentina Di Santo
- Division of Functional Morphology, Department of Zoology, Stockholm University, Svante Arrhenius väg 18B, 11419 Stockholm, Sweden
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22
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Abstract
Every spring a 600 lb Atlantic bluefin tuna travels over 3000 miles from Newfoundland to its spawning grounds in the Gulf of Mexico. That it does so on a meal of a couple of bluefish is nothing short of remarkable. Humans will likely never engineer such an efficient swimming machine. Of course, that has not stopped us from trying. We have achieved remarkable progress by following a strategy of inspiration by nature. At the same time, our fish-like robots often fall short of matching fish performance by a considerable margin. Despite our advances, we are still left asking the question: How do fish swim so well?
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23
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Akanyeti O, Di Santo V, Goerig E, Wainwright DK, Liao JC, Castro-Santos T, Lauder GV. Fish-inspired segment models for undulatory steady swimming. BIOINSPIRATION & BIOMIMETICS 2022; 17:046007. [PMID: 35487201 DOI: 10.1088/1748-3190/ac6bd6] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/18/2022] [Accepted: 04/29/2022] [Indexed: 06/14/2023]
Abstract
Many aquatic animals swim by undulatory body movements and understanding the diversity of these movements could unlock the potential for designing better underwater robots. Here, we analyzed the steady swimming kinematics of a diverse group of fish species to investigate whether their undulatory movements can be represented using a series of interconnected multi-segment models, and if so, to identify the key factors driving the segment configuration of the models. Our results show that the steady swimming kinematics of fishes can be described successfully using parsimonious models, 83% of which had fewer than five segments. In these models, the anterior segments were significantly longer than the posterior segments, and there was a direct link between segment configuration and swimming kinematics, body shape, and Reynolds number. The models representing eel-like fishes with elongated bodies and fishes swimming at high Reynolds numbers had more segments and less segment length variability along the body than the models representing other fishes. These fishes recruited their anterior bodies to a greater extent, initiating the undulatory wave more anteriorly. Two shape parameters, related to axial and overall body thickness, predicted segment configuration with moderate to high success rate. We found that head morphology was a good predictor of its segment length. While there was a large variation in head segments, the length of tail segments was similar across all models. Given that fishes exhibited variable caudal fin shapes, the consistency of tail segments could be a result of an evolutionary constraint tuned for high propulsive efficiency. The bio-inspired multi-segment models presented in this study highlight the key bending points along the body and can be used to decide on the placement of actuators in fish-inspired robots, to model hydrodynamic forces in theoretical and computational studies, or for predicting muscle activation patterns during swimming.
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Affiliation(s)
- Otar Akanyeti
- Department of Computer Science, Aberystwyth University, Ceredigion, SY23 3FL, United Kingdom
| | - Valentina Di Santo
- Division of Functional Morphology, Department of Zoology, Stockholm University, Stockholm, Sweden
| | - Elsa Goerig
- Museum of Comparative Zoology, Harvard University, Cambridge, MA, United States of America
- S.O. Conte Anadromous Fish Research Center, USGS, Turners Falls, MA, United States of America
| | - Dylan K Wainwright
- Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT, United States of America
| | - James C Liao
- Department of Biology, The Whitney Laboratory for Marine Bioscience, University of Florida, St. Augustine, FL, United States of America
| | - Theodore Castro-Santos
- S.O. Conte Anadromous Fish Research Center, USGS, Turners Falls, MA, United States of America
| | - George V Lauder
- Museum of Comparative Zoology, Harvard University, Cambridge, MA, United States of America
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24
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Wolf Z, Lauder GV. A fish-like soft-robotic model generates a diversity of swimming patterns. Integr Comp Biol 2022; 62:icac039. [PMID: 35588062 DOI: 10.1093/icb/icac039] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Fish display a versatile array of swimming patterns, and frequently demonstrate the ability to switch between these patterns altering kinematics as necessary. Many hard and soft robotic systems have sought to understand a variety of aspects pertaining to undulatory swimming, but most have been built to focus solely on a subset of those swimming patterns. We have expanded upon a previous soft robotic model, the pneufish, so that it can now simulate a variety of swimming patterns, much like a real fish. We explore the performance space available for this longer soft robotic model, which we call the quad-pneufish, with particular attention to the effects on lateral forces and z-torques produced during locomotion. We show that the quad-pneufish is capable of achieving a variety of midline patterns - including more realistic, fish-like patterns - and introducing a slight amount of co-activation between the left and right sides maintains forward thrust while decreasing lateral forces, indicating an increase in swimming efficiency. Robotic systems that are capable of producing an array of swimming movement patterns hold promise as experimental platforms for studying the diversity of fish locomotor patterns.
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Affiliation(s)
- Zane Wolf
- Department of Organismic and Evolutionary Biology, Harvard University, 26 Oxford Street, Cambridge, 02138, Massachusetts, USA
| | - George V Lauder
- Department of Organismic and Evolutionary Biology, Harvard University, 26 Oxford Street, Cambridge, 02138, Massachusetts, USA
- Museum of Comparative Zoology, Harvard University, 26 Oxford Street, Cambridge, 02138, Massachusetts, USA
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25
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Lauder GV. Robotics as a Comparative Method in Ecology and Evolutionary Biology. Integr Comp Biol 2022; 62:icac016. [PMID: 35435223 DOI: 10.1093/icb/icac016] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Comparative biologists have typically used one or more of the following methods to assist in evaluating the proposed functional and performance significance of individual traits: comparative phylogenetic analysis, direct interspecific comparison among species, genetic modification, experimental alteration of morphology (for example by surgically modifying traits), and ecological manipulation where individual organisms are transplanted to a different environment. But comparing organisms as the endpoints of an evolutionary process involves the ceteris paribus assumption: that all traits other than the one(s) of interest are held constant. In a properly controlled experimental study, only the variable of interest changes among the groups being compared. The theme of this paper is that the use of robotic or mechanical models offers an additional tool in comparative biology that helps to minimize the effect of uncontrolled variables by allowing direct manipulation of the trait of interest against a constant background. The structure and movement pattern of mechanical devices can be altered in ways not possible in studies of living animals, facilitating testing hypotheses of the functional and performance significant of individual traits. Robotic models of organismal design are particularly useful in three arenas: (1) controlling variation to allow modification only of the trait of interest, (2) the direct measurement of energetic costs of individual traits, and (3) quantification of the performance landscape. Obtaining data in these three areas is extremely difficult through the study of living organisms alone, and the use of robotic models can reveal unexpected effects. Controlling for all variables except for the length of a swimming flexible object reveals substantial non-linear effects that vary with stiffness. Quantification of the swimming performance surface reveals that there are two peaks with comparable efficiency, greatly complicating the inference of performance from morphology alone. Organisms and their ecological interactions are complex, and dissecting this complexity to understand the effects of individual traits is a grand challenge in ecology and evolutionary biology. Robotics has great promise as a "comparative method," allowing better-controlled comparative studies to analyze the many interacting elements that make up complex behaviors, ecological interactions, and evolutionary histories.
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Affiliation(s)
- George V Lauder
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138
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26
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Convergence of undulatory swimming kinematics across a diversity of fishes. Proc Natl Acad Sci U S A 2021; 118:2113206118. [PMID: 34853171 DOI: 10.1073/pnas.2113206118] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 10/17/2021] [Indexed: 11/18/2022] Open
Abstract
Fishes exhibit an astounding diversity of locomotor behaviors from classic swimming with their body and fins to jumping, flying, walking, and burrowing. Fishes that use their body and caudal fin (BCF) during undulatory swimming have been traditionally divided into modes based on the length of the propulsive body wave and the ratio of head:tail oscillation amplitude: anguilliform, subcarangiform, carangiform, and thunniform. This classification was first proposed based on key morphological traits, such as body stiffness and elongation, to group fishes based on their expected swimming mechanics. Here, we present a comparative study of 44 diverse species quantifying the kinematics and morphology of BCF-swimming fishes. Our results reveal that most species we studied share similar oscillation amplitude during steady locomotion that can be modeled using a second-degree order polynomial. The length of the propulsive body wave was shorter for species classified as anguilliform and longer for those classified as thunniform, although substantial variability existed both within and among species. Moreover, there was no decrease in head:tail amplitude from the anguilliform to thunniform mode of locomotion as we expected from the traditional classification. While the expected swimming modes correlated with morphological traits, they did not accurately represent the kinematics of BCF locomotion. These results indicate that even fish species differing as substantially in morphology as tuna and eel exhibit statistically similar two-dimensional midline kinematics and point toward unifying locomotor hydrodynamic mechanisms that can serve as the basis for understanding aquatic locomotion and controlling biomimetic aquatic robots.
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