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For: Fields PA, Somero GN. Hot spots in cold adaptation: localized increases in conformational flexibility in lactate dehydrogenase A4 orthologs of Antarctic notothenioid fishes. Proc Natl Acad Sci U S A 1998;95:11476-81. [PMID: 9736762 PMCID: PMC21668 DOI: 10.1073/pnas.95.19.11476] [Citation(s) in RCA: 291] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/27/1998] [Indexed: 11/18/2022]  Open
Number Cited by Other Article(s)
1
Alkhatabi HA, Alhashmi M, Alkhatabi HA, Altayb HN. In Silico Analysis of Temperature-Induced Structural, Stability, and Flexibility Modulations in Camel Cytochrome c. Animals (Basel) 2025;15:381. [PMID: 39943151 PMCID: PMC11815751 DOI: 10.3390/ani15030381] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2024] [Revised: 01/20/2025] [Accepted: 01/23/2025] [Indexed: 02/16/2025]  Open
2
McCormick JW, Dinan JC, Russo MA, Reynolds KA. Local disorder is associated with enhanced catalysis in an engineered photoswitch. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.11.26.625553. [PMID: 39651153 PMCID: PMC11623596 DOI: 10.1101/2024.11.26.625553] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/11/2024]
3
Wang W, Zhang X, Ran W, Ma C, Sun J, Zhao M, Pan W, Liu J, Liu R, Jiang G. Improving the Chemical Utilization Efficiency of Pd Hydrodechlorination Catalysts through Hydrogen-Spillover Empowered Synergy between Pd and TiNiN Support. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2024. [PMID: 39568214 DOI: 10.1021/acs.est.4c05860] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2024]
4
Dowd WW, Kültz D. Lost in translation? Evidence for a muted proteomic response to thermal stress in a stenothermal Antarctic fish and possible evolutionary mechanisms. Physiol Genomics 2024;56:721-740. [PMID: 39250150 DOI: 10.1152/physiolgenomics.00051.2024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2024] [Revised: 08/06/2024] [Accepted: 09/05/2024] [Indexed: 09/10/2024]  Open
5
Muir DF, Asper GPR, Notin P, Posner JA, Marks DS, Keiser MJ, Pinney MM. Evolutionary-Scale Enzymology Enables Biochemical Constant Prediction Across a Multi-Peaked Catalytic Landscape. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.10.23.619915. [PMID: 39484523 PMCID: PMC11526920 DOI: 10.1101/2024.10.23.619915] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 11/03/2024]
6
Mikucki EE, O’Leary TS, Lockwood BL. Heat tolerance, oxidative stress response tuning and robust gene activation in early-stage Drosophila melanogaster embryos. Proc Biol Sci 2024;291:20240973. [PMID: 39163981 PMCID: PMC11335408 DOI: 10.1098/rspb.2024.0973] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2024] [Revised: 06/11/2024] [Accepted: 07/26/2024] [Indexed: 08/22/2024]  Open
7
Yusof NY, Quay DHX, Kamaruddin S, Jonet MA, Md Illias R, Mahadi NM, Firdaus-Raih M, Abu Bakar FD, Abdul Murad AM. Biochemical and in silico structural characterization of a cold-active arginase from the psychrophilic yeast, Glaciozyma antarctica PI12. Extremophiles 2024;28:15. [PMID: 38300354 DOI: 10.1007/s00792-024-01333-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2023] [Accepted: 12/30/2023] [Indexed: 02/02/2024]
8
Galarza-Muñoz G, Soto-Morales SI, Jiao S, Holmgren M, Rosenthal JJC. Molecular determinants for cold adaptation in an Antarctic Na+/K+-ATPase. Proc Natl Acad Sci U S A 2023;120:e2301207120. [PMID: 37782798 PMCID: PMC10576127 DOI: 10.1073/pnas.2301207120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2023] [Accepted: 07/28/2023] [Indexed: 10/04/2023]  Open
9
Collins T, Feller G. Psychrophilic enzymes: strategies for cold-adaptation. Essays Biochem 2023;67:701-713. [PMID: 37021674 DOI: 10.1042/ebc20220193] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2023] [Revised: 03/17/2023] [Accepted: 03/27/2023] [Indexed: 04/07/2023]
10
Rummel AD, Swartz SM, Marsh RL. Thermal Stability of Contractile Proteins in Bat Wing Muscles Explains Differences in Temperature Dependence of Whole-Muscle Shortening Velocity. Physiol Biochem Zool 2023;96:100-105. [PMID: 36921272 DOI: 10.1086/722449] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
11
Li ZL, Buck M. A proteome-scale analysis of vertebrate protein amino acid occurrence: Thermoadaptation shows a correlation with protein solvation but less so with dynamics. Proteins 2023;91:3-15. [PMID: 36053994 PMCID: PMC10087973 DOI: 10.1002/prot.26404] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2022] [Revised: 07/06/2022] [Accepted: 07/25/2022] [Indexed: 12/15/2022]
12
Molecular and thermodynamic mechanisms for protein adaptation. EUROPEAN BIOPHYSICS JOURNAL 2022;51:519-534. [DOI: 10.1007/s00249-022-01618-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/28/2020] [Revised: 08/01/2022] [Accepted: 09/20/2022] [Indexed: 11/07/2022]
13
Masnoddin M, Ling CMWV, Yusof NA. Functional Analysis of Conserved Hypothetical Proteins from the Antarctic Bacterium, Pedobacter cryoconitis Strain BG5 Reveals Protein Cold Adaptation and Thermal Tolerance Strategies. Microorganisms 2022;10:microorganisms10081654. [PMID: 36014072 PMCID: PMC9415557 DOI: 10.3390/microorganisms10081654] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2022] [Revised: 08/04/2022] [Accepted: 08/12/2022] [Indexed: 11/16/2022]  Open
14
Cold-active enzymes in the dairy industry: Insight into cold adaption mechanisms and their applications. Trends Food Sci Technol 2022. [DOI: 10.1016/j.tifs.2022.05.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
15
van der Ent F, Lund BA, Svalberg L, Purg M, Chukwu G, Widersten M, Isaksen GV, Brandsdal BO, Åqvist J. Structure and Mechanism of a Cold-Adapted Bacterial Lipase. Biochemistry 2022;61:933-942. [PMID: 35503728 PMCID: PMC9118546 DOI: 10.1021/acs.biochem.2c00087] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
16
The Activation Parameters of a Cold-Adapted Short Chain Dehydrogenase Are Insensitive to Enzyme Oligomerization. Biochemistry 2022;61:514-522. [PMID: 35229609 PMCID: PMC8988307 DOI: 10.1021/acs.biochem.2c00024] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
17
Miri S, Davoodi SM, Robert T, Brar SK, Martel R, Rouissi T. Enzymatic biodegradation of highly p-xylene contaminated soil using cold-active enzymes: A soil column study. JOURNAL OF HAZARDOUS MATERIALS 2022;423:127099. [PMID: 34523486 DOI: 10.1016/j.jhazmat.2021.127099] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2021] [Revised: 08/24/2021] [Accepted: 08/29/2021] [Indexed: 06/13/2023]
18
Somero GN. The Goldilocks Principle: A Unifying Perspective on Biochemical Adaptation to Abiotic Stressors in the Sea. ANNUAL REVIEW OF MARINE SCIENCE 2022;14:1-23. [PMID: 34102065 DOI: 10.1146/annurev-marine-022521-102228] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
19
Feng J, Xu S, Feng R, Kovalevsky A, Zhang X, Liu D, Wan Q. Identification and structural analysis of a thermophilic β-1,3-glucanase from compost. BIORESOUR BIOPROCESS 2021;8:102. [PMID: 38650272 PMCID: PMC10992293 DOI: 10.1186/s40643-021-00449-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2021] [Accepted: 09/24/2021] [Indexed: 11/10/2022]  Open
20
Rollwitz E, Jastroch M. Plate-Based Respirometry to Assess Thermal Sensitivity of Zebrafish Embryo Bioenergetics in situ. Front Physiol 2021;12:746367. [PMID: 34621190 PMCID: PMC8491625 DOI: 10.3389/fphys.2021.746367] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2021] [Accepted: 08/24/2021] [Indexed: 11/19/2022]  Open
21
Miri S, Perez JAE, Brar SK, Rouissi T, Martel R. Sustainable production and co-immobilization of cold-active enzymes from Pseudomonas sp. for BTEX biodegradation. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021;285:117678. [PMID: 34380234 DOI: 10.1016/j.envpol.2021.117678] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2021] [Revised: 05/13/2021] [Accepted: 06/27/2021] [Indexed: 05/09/2023]
22
Lipaeva P, Vereshchagina K, Drozdova P, Jakob L, Kondrateva E, Lucassen M, Bedulina D, Timofeyev M, Stadler P, Luckenbach T. Different ways to play it cool: Transcriptomic analysis sheds light on different activity patterns of three amphipod species under long-term cold exposure. Mol Ecol 2021;30:5735-5751. [PMID: 34480774 DOI: 10.1111/mec.16164] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2021] [Accepted: 08/31/2021] [Indexed: 12/27/2022]
23
Gault S, Jaworek MW, Winter R, Cockell CS. Perchlorate salts confer psychrophilic characteristics in α-chymotrypsin. Sci Rep 2021;11:16523. [PMID: 34400699 PMCID: PMC8367967 DOI: 10.1038/s41598-021-95997-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2021] [Accepted: 07/30/2021] [Indexed: 11/16/2022]  Open
24
Chen Q, Wu Y, Huang Z, Zhang W, Mu W. Molecular Characterization of a Mesophilic Cellobiose 2-Epimerase That Maintains a High Catalytic Efficiency at Low Temperatures. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2021;69:8268-8275. [PMID: 34231359 DOI: 10.1021/acs.jafc.1c02025] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
25
A meta-analysis of the activity, stability, and mutational characteristics of temperature-adapted enzymes. Biosci Rep 2021;41:228416. [PMID: 33871022 PMCID: PMC8150157 DOI: 10.1042/bsr20210336] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2021] [Revised: 03/29/2021] [Accepted: 04/19/2021] [Indexed: 11/17/2022]  Open
26
Fields PA. Reductionism in the study of enzyme adaptation. Comp Biochem Physiol B Biochem Mol Biol 2021;254:110574. [PMID: 33600949 DOI: 10.1016/j.cbpb.2021.110574] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2021] [Revised: 02/08/2021] [Accepted: 02/09/2021] [Indexed: 10/22/2022]
27
Miri S, Davoodi SM, Brar SK, Rouissi T, Sheng Y, Martel R. Psychrozymes as novel tools to biodegrade p-xylene and potential use for contaminated groundwater in the cold climate. BIORESOURCE TECHNOLOGY 2021;321:124464. [PMID: 33302008 DOI: 10.1016/j.biortech.2020.124464] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2020] [Revised: 11/24/2020] [Accepted: 11/25/2020] [Indexed: 06/12/2023]
28
Rojas-Pirela M, Andrade-Alviárez D, Rojas V, Kemmerling U, Cáceres AJ, Michels PA, Concepción JL, Quiñones W. Phosphoglycerate kinase: structural aspects and functions, with special emphasis on the enzyme from Kinetoplastea. Open Biol 2020;10:200302. [PMID: 33234025 PMCID: PMC7729029 DOI: 10.1098/rsob.200302] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]  Open
29
Akita M, Nishikawa Y, Shigenobu Y, Ambe D, Morita T, Morioka K, Adachi K. Correlation of proline, hydroxyproline and serine content, denaturation temperature and circular dichroism analysis of type I collagen with the physiological temperature of marine teleosts. Food Chem 2020;329:126775. [DOI: 10.1016/j.foodchem.2020.126775] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2019] [Revised: 03/08/2020] [Accepted: 04/07/2020] [Indexed: 12/24/2022]
30
Miller WT. Temperature sensitivities of metazoan and pre-metazoan Src kinases. Biochem Biophys Rep 2020;23:100775. [PMID: 32566764 PMCID: PMC7298416 DOI: 10.1016/j.bbrep.2020.100775] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2020] [Revised: 06/01/2020] [Accepted: 06/04/2020] [Indexed: 11/24/2022]  Open
31
Alster CJ, von Fischer JC, Allison SD, Treseder KK. Embracing a new paradigm for temperature sensitivity of soil microbes. GLOBAL CHANGE BIOLOGY 2020;26:3221-3229. [PMID: 32097522 DOI: 10.1111/gcb.15053] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2019] [Revised: 02/03/2020] [Accepted: 02/21/2020] [Indexed: 05/14/2023]
32
Faria SC, Bianchini A, Lauer MM, Zimbardi ALRL, Tapella F, Romero MC, McNamara JC. Living on the Edge: Physiological and Kinetic Trade-Offs Shape Thermal Tolerance in Intertidal Crabs From Tropical to Sub-Antarctic South America. Front Physiol 2020;11:312. [PMID: 32390860 PMCID: PMC7194293 DOI: 10.3389/fphys.2020.00312] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2019] [Accepted: 03/19/2020] [Indexed: 11/13/2022]  Open
33
Chao YC, Merritt M, Schaefferkoetter D, Evans TG. High-throughput quantification of protein structural change reveals potential mechanisms of temperature adaptation in Mytilus mussels. BMC Evol Biol 2020;20:28. [PMID: 32054457 PMCID: PMC7020559 DOI: 10.1186/s12862-020-1593-y] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2019] [Accepted: 02/05/2020] [Indexed: 11/10/2022]  Open
34
Katava M, Marchi M, Madern D, Sztucki M, Maccarini M, Sterpone F. Temperature Unmasks Allosteric Propensity in a Thermophilic Malate Dehydrogenase via Dewetting and Collapse. J Phys Chem B 2020;124:1001-1008. [DOI: 10.1021/acs.jpcb.9b10776] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
35
Sočan J, Isaksen GV, Brandsdal BO, Åqvist J. Towards Rational Computational Engineering of Psychrophilic Enzymes. Sci Rep 2019;9:19147. [PMID: 31844096 PMCID: PMC6915740 DOI: 10.1038/s41598-019-55697-4] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2019] [Accepted: 11/30/2019] [Indexed: 12/14/2022]  Open
36
Effects of the substituted amino acid residues on the thermal properties of monomeric isocitrate dehydrogenases from a psychrophilic bacterium, Psychromonas marina, and a mesophilic bacterium, Azotobacter vinelandii. Extremophiles 2019;23:809-820. [PMID: 31595369 DOI: 10.1007/s00792-019-01137-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2019] [Accepted: 09/23/2019] [Indexed: 10/25/2022]
37
Wang JT, Wang YT, Keshavmurthy S, Meng PJ, Chen CA. The coral Platygyra verweyi exhibits local adaptation to long-term thermal stress through host-specific physiological and enzymatic response. Sci Rep 2019;9:13492. [PMID: 31530828 PMCID: PMC6748984 DOI: 10.1038/s41598-019-49594-z] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2019] [Accepted: 08/23/2019] [Indexed: 11/25/2022]  Open
38
Chakravarty D, Bihani SC, Banerjee M, Ballal A. Novel molecular insights into the anti-oxidative stress response and structure-function of a salt-inducible cyanobacterial Mn-catalase. PLANT, CELL & ENVIRONMENT 2019;42:2508-2521. [PMID: 30993731 DOI: 10.1111/pce.13563] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2019] [Accepted: 04/07/2019] [Indexed: 06/09/2023]
39
Kühnhold H, Novais SC, Alves LMF, Kamyab E, Lemos MFL, Slater MJ, Kunzmann A. Acclimation capability inferred by metabolic performance in two sea cucumber species from different latitudes. J Therm Biol 2019;84:407-413. [PMID: 31466780 DOI: 10.1016/j.jtherbio.2019.07.019] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2019] [Revised: 06/30/2019] [Accepted: 07/17/2019] [Indexed: 01/30/2023]
40
Gallo AC, Brasileiro CA, DE Barros FC, DE Carvalho JE. Thermal and salinity effects on locomotor performance of Thoropa taophora tadpoles (Anura, Cycloramphidae). Integr Zool 2019;15:40-54. [PMID: 31149773 DOI: 10.1111/1749-4877.12405] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
41
Twort VG, Newcomb RD, Buckley TR. New Zealand Tree and Giant Wētā (Orthoptera) Transcriptomics Reveal Divergent Selection Patterns in Metabolic Loci. Genome Biol Evol 2019;11:1293-1306. [PMID: 30957857 PMCID: PMC6486805 DOI: 10.1093/gbe/evz070] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 04/01/2019] [Indexed: 01/01/2023]  Open
42
Yusof NA, Kamaruddin S, Abu Bakar FD, Mahadi NM, Abdul Murad AM. Structural and functional insights into TRiC chaperonin from a psychrophilic yeast, Glaciozyma antarctica. Cell Stress Chaperones 2019;24:351-368. [PMID: 30649671 PMCID: PMC6439030 DOI: 10.1007/s12192-019-00969-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2018] [Revised: 01/04/2019] [Accepted: 01/08/2019] [Indexed: 12/29/2022]  Open
43
Berthelot C, Clarke J, Desvignes T, William Detrich H, Flicek P, Peck LS, Peters M, Postlethwait JH, Clark MS. Adaptation of Proteins to the Cold in Antarctic Fish: A Role for Methionine? Genome Biol Evol 2019;11:220-231. [PMID: 30496401 PMCID: PMC6336007 DOI: 10.1093/gbe/evy262] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 11/26/2018] [Indexed: 12/25/2022]  Open
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Comparing mutagenesis and simulations as tools for identifying functionally important sequence changes for protein thermal adaptation. Proc Natl Acad Sci U S A 2018;116:679-688. [PMID: 30584112 DOI: 10.1073/pnas.1817455116] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
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Cold survival strategies for bacteria, recent advancement and potential industrial applications. Arch Microbiol 2018;201:1-16. [PMID: 30478730 DOI: 10.1007/s00203-018-1602-3] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2018] [Revised: 11/04/2018] [Accepted: 11/24/2018] [Indexed: 12/12/2022]
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Saavedra HG, Wrabl JO, Anderson JA, Li J, Hilser VJ. Dynamic allostery can drive cold adaptation in enzymes. Nature 2018;558:324-328. [PMID: 29875414 PMCID: PMC6033628 DOI: 10.1038/s41586-018-0183-2] [Citation(s) in RCA: 127] [Impact Index Per Article: 18.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2017] [Accepted: 05/01/2018] [Indexed: 11/19/2022]
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Enzymes can adapt to cold by wiggling regions far from their active site. Nature 2018;558:195-196. [DOI: 10.1038/d41586-018-05302-x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Saarman NP, Kober KM, Simison WB, Pogson GH. Sequence-Based Analysis of Thermal Adaptation and Protein Energy Landscapes in an Invasive Blue Mussel (Mytilus galloprovincialis). Genome Biol Evol 2018;9:2739-2751. [PMID: 28985307 PMCID: PMC5647807 DOI: 10.1093/gbe/evx190] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/13/2017] [Indexed: 12/12/2022]  Open
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Sočan J, Kazemi M, Isaksen GV, Brandsdal BO, Åqvist J. Catalytic Adaptation of Psychrophilic Elastase. Biochemistry 2018;57:2984-2993. [PMID: 29726678 DOI: 10.1021/acs.biochem.8b00078] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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Zhang D, Hu P, Liu T, Wang J, Jiang S, Xu Q, Chen L. GC bias lead to increased small amino acids and random coils of proteins in cold-water fishes. BMC Genomics 2018;19:315. [PMID: 29720106 PMCID: PMC5930961 DOI: 10.1186/s12864-018-4684-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2017] [Accepted: 04/16/2018] [Indexed: 11/10/2022]  Open
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