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Ni Y, Lebelt J, Barp M, Kreuter F, Buttkus H, Jin J, Kretzschmar M, Tonner-Zech R, Asmis KR, Gulder T. Hexafluorophosphate-Triggered Hydrogen Isotope Exchange (HIE) in Fluorinated Environments: A Platform for the Deuteration of Aromatic Compounds via Strong Bond Activation. Angew Chem Int Ed Engl 2025; 64:e202417889. [PMID: 39564991 DOI: 10.1002/anie.202417889] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2024] [Revised: 10/29/2024] [Accepted: 11/08/2024] [Indexed: 11/21/2024]
Abstract
There is a perpetual need for efficient and mild methods to integrate deuterium atoms into carbon frameworks through late-stage modifications. We have developed a simple and highly effective synthetic route for hydrogen isotope exchange (HIE) in aromatic compounds under ambient conditions. This method utilizes catalytic amounts of hexafluorophosphate (PF6 -) in deuterated 1,1,1,3,3,3-hexafluoroisopropanol (HFIP-d1) and D2O. Phenols, anilines, anisoles, and heterocyclic compounds were converted with high yields and excellent deuterium incorporations, which allows for the synthesis of a wide range of deuterated aromatic compounds. Spectroscopic and theoretical studies show that an interactive H-bonding network triggered by HFIP-d1 activates the typically inert P-F bond in PF6 - for D2O addition. The thus in situ formed DPO2F2 then triggers HIE, offering a new way to deuterated building blocks, drugs, and natural-product derivatives with high deuterium incorporation via the activation of strong bonds.
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Affiliation(s)
- Yang Ni
- Biomimetic Catalysis, Catalysis Research Center, TUM School of Natural Sciences, Technical University of Munich, Lichtenbergstrasse 4, 85748, Garching, Germany
- Institute of Organic Chemistry, Faculty of Chemistry and Mineralogy, Leipzig University, Johannisallee 29, 04103, Leipzig, Germany
| | - Jonathan Lebelt
- Institute of Organic Chemistry, Faculty of Chemistry and Mineralogy, Leipzig University, Johannisallee 29, 04103, Leipzig, Germany
- Organic Chemistry-, Biomimetic Catalysis, Saarland University, 66123, Saarbruecken, Germany
| | - Milena Barp
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstraße 2, 04103, Leipzig, Germany
| | - Florian Kreuter
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstraße 2, 04103, Leipzig, Germany
| | - Hannah Buttkus
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstraße 2, 04103, Leipzig, Germany
| | - Jiaye Jin
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstraße 2, 04103, Leipzig, Germany
| | - Martin Kretzschmar
- Institute of Organic Chemistry, Faculty of Chemistry and Mineralogy, Leipzig University, Johannisallee 29, 04103, Leipzig, Germany
| | - Ralf Tonner-Zech
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstraße 2, 04103, Leipzig, Germany
| | - Knut R Asmis
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstraße 2, 04103, Leipzig, Germany
| | - Tanja Gulder
- Biomimetic Catalysis, Catalysis Research Center, TUM School of Natural Sciences, Technical University of Munich, Lichtenbergstrasse 4, 85748, Garching, Germany
- Institute of Organic Chemistry, Faculty of Chemistry and Mineralogy, Leipzig University, Johannisallee 29, 04103, Leipzig, Germany
- Organic Chemistry-, Biomimetic Catalysis, Saarland University, 66123, Saarbruecken, Germany
- Synthesis of Natural-Product Derived Drugs, Helmholtz Institute for Pharmaceutical Research Saarland (HIPS), Helmholtz Centre for Infection Research (HZI), 66123, Saarbruecken, Germany
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2
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Barp M, Kreuter F, Huang QR, Jin J, Ninov FE, Kuo JL, Tonner-Zech R, Asmis KR. Quantifying hexafluoroisopropanol's hydrogen bond donor ability: infrared photodissociation spectroscopy of halide anion HFIP complexes. Chem Sci 2025:d4sc08456j. [PMID: 39981035 PMCID: PMC11838612 DOI: 10.1039/d4sc08456j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2024] [Accepted: 01/28/2025] [Indexed: 02/22/2025] Open
Abstract
We report on the gas phase vibrational spectroscopy (3500-950 cm-1) of halide anion complexes with 1,1,1,3,3,3-hexafluoroisopropanol (HFIP) and its partially deuterated analogue (HFIP-d 1). Infrared photodissociation spectra of messenger-tagged X-(HFIP/HFIP-d 1), with X- = Cl-, Br-, and I-, together with electronic structure calculations reveal O-H(D) stretching fundamentals that are red-shifted twice as much as those for the corresponding complexes with isopropanol and water, directly reflecting HFIP's enhanced hydrogen-bond donor ability. The harmonic analysis of the bands in the fingerprint region reveals that HFIP assumes a synperiplanar conformation in the complexes. The consideration of anharmonic effects is necessary to recover the efficient coupling between stretching and bending modes in the OH stretching region. An energy decomposition analysis shows that the roughly twice as large binding energy in the HFIP complexes vs. i-PrOH and water is determined mainly by differences in the electrostatic attraction. The observed red-shifts, which reflect the extent of charge transfer along the coordinate of the proton transfer reaction X- + HM → XH + M-, correlate qualitatively with the difference in the proton affinities ΔPA = PA(X-) - PA(M-). A more quantitative agreement requires also considering differences in the hydrogen bond angle.
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Affiliation(s)
- Milena Barp
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig Linnéstraße 2 04103 Leipzig Germany
| | - Florian Kreuter
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig Linnéstraße 2 04103 Leipzig Germany
| | - Qian-Rui Huang
- Institute of Atomic and Molecular Sciences Academia Sinica No. 1 Roosevelt Rd, Sec 4 Taipei 106319 Taiwan
| | - Jiaye Jin
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig Linnéstraße 2 04103 Leipzig Germany
| | - Franka E Ninov
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig Linnéstraße 2 04103 Leipzig Germany
| | - Jer-Lai Kuo
- Institute of Atomic and Molecular Sciences Academia Sinica No. 1 Roosevelt Rd, Sec 4 Taipei 106319 Taiwan
| | - Ralf Tonner-Zech
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig Linnéstraße 2 04103 Leipzig Germany
| | - Knut R Asmis
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig Linnéstraße 2 04103 Leipzig Germany
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3
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Dongmo EG, Haque S, Kreuter F, Wulf T, Jin J, Tonner-Zech R, Heine T, Asmis KR. Direct evidence for ligand-enhanced activity of Cu(i) sites. Chem Sci 2024; 15:14635-14643. [PMID: 39381432 PMCID: PMC11460435 DOI: 10.1039/d4sc04582c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2024] [Accepted: 08/09/2024] [Indexed: 10/10/2024] Open
Abstract
Little is known about the strong mediating effect of the ligand sphere and the coordination geometry on the strength and isotopologue selectivity of hydrogen adsorption on the undercoordinated copper(i) site. Here, we explore this effect using gas-phase complexes Cu+(H2O)(H2) n (with n ≤ 3) as model systems. Cu+(H2O) attracts dihydrogen (82 kJ mol -1) more strongly than bare Cu+ (64 kJ mol -1) does. Combining experimental and computational methods, we demonstrate a high isotopologue selectivity in dihydrogen binding to Cu+(H2O), which results from a large difference in the adsorption zero-point energies (2.8 kJ mol-1 between D2 and H2, including an anharmonic contribution of 0.4 kJ mol-1). We investigate its origins and the bond strengthening between Cu+ and H2 upon addition of a single H2O ligand. We discuss the role of the environment and the coordination geometry of the adsorption site in achieving a high selectivity and the ramifications for identifying and designing future materials for adsorptive dihydrogen isotopologue separation.
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Affiliation(s)
- Elvira Gouatieu Dongmo
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig Linnéstr. 2 04103 Leipzig Germany
- Institute of Resource Ecology, Research Site Leipzig, Helmholtz-Zentrum Dresden-Rossendorf Permoserstr. 15 04318 Leipzig Germany
| | - Shabnam Haque
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig Linnéstr. 2 04103 Leipzig Germany
| | - Florian Kreuter
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig Linnéstr. 2 04103 Leipzig Germany
| | - Toshiki Wulf
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig Linnéstr. 2 04103 Leipzig Germany
- Faculty of Chemistry and Food Chemistry, School of Science, TU Dresden 01062 Dresden Germany
| | - Jiaye Jin
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig Linnéstr. 2 04103 Leipzig Germany
| | - Ralf Tonner-Zech
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig Linnéstr. 2 04103 Leipzig Germany
| | - Thomas Heine
- Institute of Resource Ecology, Research Site Leipzig, Helmholtz-Zentrum Dresden-Rossendorf Permoserstr. 15 04318 Leipzig Germany
- Faculty of Chemistry and Food Chemistry, School of Science, TU Dresden 01062 Dresden Germany
- Department of Chemistry and ibs for Nanomedicine, Yonsei University Seodaemun-gu Seoul 120-749 Republic of Korea
| | - Knut R Asmis
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig Linnéstr. 2 04103 Leipzig Germany
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Bödecker M, Mihrin D, Suhm MA, Wugt Larsen R. Regularities and Anomalies in Neon Matrix Shifts of Hydrogen-Bonded O-H Stretching Fundamentals. J Phys Chem A 2024; 128:7124-7136. [PMID: 39155731 PMCID: PMC11372756 DOI: 10.1021/acs.jpca.4c03468] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/20/2024]
Abstract
O-H bond stretching vibrations in hydrogen-bonded complexes embedded into cryogenic neon matrices are subtly downshifted from cold gas phase reference wavenumbers. To the extent that this shift is systematic, it enables neon matrices as more universally applicable spectroscopic benchmark environments for quantum chemical predictions. Outliers are indicative of either an assignment problem in one of the two cryogenic experiments or they reveal interesting dynamics or structural effects on the complexes as a function of the environment. We compile 6 literature-known pairs of experimental data in jet and neon matrix expansions and realize a 6-fold expansion of that number through targeted matrix isolation and/or slit jet expansion spectroscopy presented in this work. In many cases, the neon matrix shift is less than the uncertainty of the currently best-performing blind quantum chemical predictions for the gas phase, but in specific cases, it may exceed the currently achievable theoretical accuracy. Some evidence for a positive correlation of the matrix shift with the hydrogen bond shift is found, similar to observations for helium nanodroplets. Outliers in particular for water acting as a donor are discussed, and in a few cases they call for a future reinvestigation. Substantial improvement in the correlation of the matrix shift with the hydrogen bond shift is achieved for ketone monohydrates by removing a vibrational resonance. New insights into nitrile hydration isomerism are obtained, and the linear OH stretching spectrum of the jet-cooled ammonia-water complex is presented for the first time. Vibrational spectroscopy in weakly perturbing solid rare gas quantum matrices for the benchmarking of gas phase theory and future explicit theoretical treatments of the quantum matrix environment to better understand the outliers are both encouraged.
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Affiliation(s)
- Margarethe Bödecker
- Institute of Physical Chemistry, University of Göttingen, Tammannstrasse 6, 37077 Göttingen, Germany
| | - Dmytro Mihrin
- Department of Chemistry, Technical University of Denmark, Kemitorvet 206, 2800 Kgs. Lyngby, Denmark
| | - Martin A Suhm
- Institute of Physical Chemistry, University of Göttingen, Tammannstrasse 6, 37077 Göttingen, Germany
| | - René Wugt Larsen
- Department of Chemistry, Technical University of Denmark, Kemitorvet 206, 2800 Kgs. Lyngby, Denmark
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5
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Wang Y, Zhan S, Hu Y, Chen X, Yin S. Understanding the Formation and Growth of New Atmospheric Particles at the Molecular Level through Laboratory Molecular Beam Experiments. Chempluschem 2024; 89:e202400108. [PMID: 38497136 DOI: 10.1002/cplu.202400108] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2024] [Revised: 03/15/2024] [Accepted: 03/15/2024] [Indexed: 03/19/2024]
Abstract
Atmospheric new particle formation (NPF), which exerts comprehensive implications for climate, air quality and human health, has received extensive attention. From molecule to cluster is the initial and most important stage of the nucleation process of atmospheric new particles. However, due to the complexity of the nucleation process and limitations of experimental characterization techniques, there is still a great uncertainty in understanding the nucleation mechanism at the molecular level. Laboratory-based molecular beam methods can experimentally implement the generation and growth of typical atmospheric gas-phase nucleation precursors to nanoscale clusters, characterize the key physical and chemical properties of clusters such as structure and composition, and obtain a series of their physicochemical parameters, including association rate coefficients, electron binding energy, pickup cross section and pickup probability and so on. These parameters can quantitatively illustrate the physicochemical properties of the cluster, and evaluate the effect of different gas phase nucleation precursors on the formation and growth of atmospheric new particles. We review the present literatures on atmospheric cluster formation and reaction employing the experimental method of laboratory molecular beam. The experimental apparatuses were classified and summarized from three aspects of cluster generation, growth and detection processes. Focus of this review is on the properties of nucleation clusters involving different precursor molecules of water, sulfuric acid, nitric acid and NxOy, respectively. We hope this review will provide a deep insight for effects of cluster physicochemical properties on nucleation, and reveal the formation and growth mechanism of atmospheric new particle at the molecular level.
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Affiliation(s)
- Yadong Wang
- MOE & Guangdong Province Key Laboratory of Laser Life Science & Institute of Laser Life Science & Guangzhou Key Laboratory of Spectral Analysis and Functional Probes, College of Biophotonics, South China Normal University, Guangzhou, 510631, P. R. China
| | - Shiyu Zhan
- MOE & Guangdong Province Key Laboratory of Laser Life Science & Institute of Laser Life Science & Guangzhou Key Laboratory of Spectral Analysis and Functional Probes, College of Biophotonics, South China Normal University, Guangzhou, 510631, P. R. China
| | - Yongjun Hu
- MOE & Guangdong Province Key Laboratory of Laser Life Science & Institute of Laser Life Science & Guangzhou Key Laboratory of Spectral Analysis and Functional Probes, College of Biophotonics, South China Normal University, Guangzhou, 510631, P. R. China
| | - Xi Chen
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou, 510650, P. R. China
| | - Shi Yin
- MOE & Guangdong Province Key Laboratory of Laser Life Science & Institute of Laser Life Science & Guangzhou Key Laboratory of Spectral Analysis and Functional Probes, College of Biophotonics, South China Normal University, Guangzhou, 510631, P. R. China
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6
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Torres-Boy A, Taccone MI, Kirschbaum C, Ober K, Stein T, Meijer G, von Helden G. Investigation of the Proton-Bound Dimer of Dihydrogen Phosphate and Formate Using Infrared Spectroscopy in Helium Droplets. J Phys Chem A 2024; 128:4456-4466. [PMID: 38771224 PMCID: PMC11163467 DOI: 10.1021/acs.jpca.4c01632] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2024] [Revised: 05/03/2024] [Accepted: 05/06/2024] [Indexed: 05/22/2024]
Abstract
Understanding the structural and dynamic properties of proton-bound complexes is crucial for elucidating fundamental aspects of chemical reactivity and molecular interactions. In this work, the proton-bound complex between dihydrogen phosphate and formate, and its deuterated counterparts, is investigated using IR action spectroscopy in helium droplets. Contrary to the initial expectation that the stronger phosphoric acid would donate a proton to formate, both experiment and theory show that all exchangeable protons are located in the phosphate moiety. The experimental spectra show good agreement with both scaled harmonic and VPT2 anharmonic calculations, indicating that anharmonic effects are small. Some H-bending modes of the nondeuterated complex are found to be sensitive to the helium environment. In the case of the partially deuterated complexes, the experiments indicate that internal dynamics leads to isomeric interconversion upon IR excitation.
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Affiliation(s)
| | - Martín I. Taccone
- Fritz
Haber Institute of the Max Planck Society, 14195 Berlin, Germany
| | - Carla Kirschbaum
- Fritz
Haber Institute of the Max Planck Society, 14195 Berlin, Germany
- Institute
of Chemistry and Biochemistry, Freie Universität
Berlin, 14195 Berlin, Germany
| | - Katja Ober
- Fritz
Haber Institute of the Max Planck Society, 14195 Berlin, Germany
| | - Tamar Stein
- Institute
of Chemistry and Fritz Haber Center for Molecular Dynamics, Hebrew University of Jerusalem, 91904 Jerusalem, Israel
| | - Gerard Meijer
- Fritz
Haber Institute of the Max Planck Society, 14195 Berlin, Germany
| | - Gert von Helden
- Fritz
Haber Institute of the Max Planck Society, 14195 Berlin, Germany
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7
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Schmahl S, Horn F, Jin J, Westphal H, Belder D, Asmis KR. Online-Monitoring of the Enantiomeric Ratio in Microfluidic Chip Reactors Using Chiral Selector Ion Vibrational Spectroscopy. Chemphyschem 2024; 25:e202300975. [PMID: 38418402 DOI: 10.1002/cphc.202300975] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2023] [Revised: 02/23/2024] [Accepted: 02/23/2024] [Indexed: 03/01/2024]
Abstract
A novel experimental approach for the rapid online monitoring of the enantiomeric ratio of chiral analytes in solution is presented. The charged analyte is transferred to the gas phase by electrospray. Diastereomeric complexes are formed with a volatile chiral selector in a buffer-gas-filled ion guide held at room temperature, mass-selected, and subsequently spectrally differentiated by cryogenic ion trap vibrational spectroscopy. Based on the spectra of the pure complexes in a small diastereomer-specific spectral range, the composition of diastereomeric mixtures is characterized using the cosine similarity score, from which the enantiomeric ratio in the solution is determined. The method is demonstrated for acidified alanine solutions and using three different chiral selectors (2-butanol, 1-phenylethanol, 1-amino-2-propanol). Among these, 2-butanol is the best choice as a selector for protonated alanine, also because the formation ratio of the corresponding diastereomeric complexes is found to be independent of the nature of the enantiomer. Subsequently, a microfluidic chip is implemented to mix enantiomerically pure alanine solutions continuously and determine the enantiomeric ratio online with minimal sample consumption within one minute and with competitive accuracy.
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Affiliation(s)
- Sonja Schmahl
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstraße 2, 04103, Leipzig, Germany
| | - Francine Horn
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstraße 2, 04103, Leipzig, Germany
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195, Berlin, Germany
| | - Jiaye Jin
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstraße 2, 04103, Leipzig, Germany
| | - Hannes Westphal
- Institut für Analytische Chemie, Universität Leipzig, Linnéstraße 3, 04103, Leipzig, Germany
| | - Detlev Belder
- Institut für Analytische Chemie, Universität Leipzig, Linnéstraße 3, 04103, Leipzig, Germany
| | - Knut R Asmis
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstraße 2, 04103, Leipzig, Germany
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Kawa S, Knorke H, Jin J, Rohdenburg M, Asmis KR, Tonner-Zech R, Bernhardt E, Jenne C, Finze M, Warneke J. Binding Properties of Small Electrophilic Anions [B 6 X 5 ] - and [B 10 X 9 ] - (X=Cl, Br, I): Activation of Small Molecules Based on π-Backbonding. Chemistry 2023; 29:e202302247. [PMID: 37749942 DOI: 10.1002/chem.202302247] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2023] [Revised: 09/25/2023] [Accepted: 09/25/2023] [Indexed: 09/27/2023]
Abstract
Superelectrophilic anions constitute a special class of molecular anions that show strong binding of weak nucleophiles despite their negative charge. In this study, the binding characteristics of smaller gaseous electrophilic anions of the types [B6 X5 ]- and [B10 X9 ]- (with X=Cl, Br, I) were computationally and experimentally investigated and compared to those of the larger analogues [B12 X11 ]- . The positive charge of vacant boron increases from [B6 X5 ]- via [B10 X9 ]- to [B12 X11 ]- , as evidenced by increasing attachment enthalpies towards typical σ-donor molecules (noble gases, H2 O). However, this behavior is reversed for σ-donor-π-acceptor molecules. [B6 Cl5 ]- binds most strongly to N2 and CO, even more strongly than to H2 O. Energy decomposition analysis confirms that the orbital interaction is responsible for this opposite trend. The extended transition state natural orbitals for chemical valence method shows that the π-backdonation order is [B6 X5 ]- >[B10 X9 ]- >[B12 X11 ]- . This predicted order explains the experimentally observed red shifts of the CO and N2 stretching fundamentals compared to those of the unbound molecules, as measured by infrared photodissociation spectroscopy. The strongest red shift is observed for [B6 Cl5 N2 ]- : 222 cm-1 . Therefore, strong activation of unreactive σ-donor-π-acceptor molecules (commonly observed for cationic transition metal complexes) is achieved with metal-free molecular anions.
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Affiliation(s)
- Sebastian Kawa
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstr. 2, 04103, Leipzig, Germany
| | - Harald Knorke
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstr. 2, 04103, Leipzig, Germany
| | - Jiaye Jin
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstr. 2, 04103, Leipzig, Germany
| | - Markus Rohdenburg
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstr. 2, 04103, Leipzig, Germany
| | - Knut R Asmis
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstr. 2, 04103, Leipzig, Germany
| | - Ralf Tonner-Zech
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstr. 2, 04103, Leipzig, Germany
| | - Eduard Bernhardt
- Anorganische Chemie, Fakultät für Mathematik und Naturwissenschaften, Bergische Universität Wuppertal, Gaußstr. 20, 42119, Wuppertal, Germany
| | - Carsten Jenne
- Anorganische Chemie, Fakultät für Mathematik und Naturwissenschaften, Bergische Universität Wuppertal, Gaußstr. 20, 42119, Wuppertal, Germany
| | - Maik Finze
- Institut für Anorganische Chemie, Institut für Nachhaltige Chemie & Katalyse mit Bor (ICB), Julius-Maximilians-Universität Würzburg, Am Hubland, 97074, Würzburg, Germany
| | - Jonas Warneke
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstr. 2, 04103, Leipzig, Germany
- Leibniz Institute of Surface Engineering (IOM), Permoserstr. 15, 04318, Leipzig, Germany
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9
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Miyazaki M, Ono M, Otsuka R, Dopfer O, Fujii M. Electronic and vibrational spectroscopies of aromatic clusters with He in a supersonic jet: The case of neutral and cationic phenol-Hen (n = 1 and 2). J Chem Phys 2023; 159:134303. [PMID: 37787127 DOI: 10.1063/5.0169716] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Accepted: 09/15/2023] [Indexed: 10/04/2023] Open
Abstract
Van der Waals clusters composed of He and aromatic molecules provide fundamental information about intermolecular interactions in weakly bound systems. In this study, phenol-helium clusters (PhOH-Hen with n ≤ 2) are characterized for the first time by UV and IR spectroscopies. The S1 ← S0 origin and ionization energy both show small but additive shifts, suggesting π-bound structures of these clusters, a conclusion supported by rotational contour analyses of the S1 origin bands. The OH stretching vibrations of the PhOH moiety in the clusters match with those of bare PhOH in both the S0 and D0 states, illustrating the negligible perturbation of the He atoms on the molecular vibration. Matrix shifts induced by He attachment are discussed based on the observed band positions with the help of complementary quantum chemical calculations. For comparison, the UV and ionization spectra of PhOH-Ne are reported as well.
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Affiliation(s)
- Mitsuhiko Miyazaki
- Natural Science Division, Faculty of Core Research, Ochanomizu University, 2-1-1 Ohtsuka, Bunkyo-ku, Tokyo 112-8610, Japan
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama 226-8503, Japan
| | - Megumi Ono
- School of Life Science and Technology, Tokyo Institute of Technology, 4259, Nagatsuta-cho, Midori-ku, Yokohama 226-8503, Japan
| | - Remina Otsuka
- School of Life Science and Technology, Tokyo Institute of Technology, 4259, Nagatsuta-cho, Midori-ku, Yokohama 226-8503, Japan
| | - Otto Dopfer
- Institut für Optik und Atomare Physik, Technische Universität Berlin, 10623 Berlin, Germany
- International Research Frontiers Initiative (IRFI), Institute of Innovation Research, Tokyo Institute of Technology, 4259, Nagatsuta-cho, Midori-ku, Yokohama 226-8503, Japan
| | - Masaaki Fujii
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama 226-8503, Japan
- School of Life Science and Technology, Tokyo Institute of Technology, 4259, Nagatsuta-cho, Midori-ku, Yokohama 226-8503, Japan
- International Research Frontiers Initiative (IRFI), Institute of Innovation Research, Tokyo Institute of Technology, 4259, Nagatsuta-cho, Midori-ku, Yokohama 226-8503, Japan
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10
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Chen L, Ma Z, Fournier JA. Ultrafast transient vibrational action spectroscopy of cryogenically cooled ions. J Chem Phys 2023; 159:041101. [PMID: 37486043 DOI: 10.1063/5.0155490] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2023] [Accepted: 05/25/2023] [Indexed: 07/25/2023] Open
Abstract
Ultrafast transient vibrational action spectra of cryogenically cooled Re(CO)3(CH3CN)3+ ions are presented. Nonlinear spectra were collected in the time domain by monitoring the photodissociation of a weakly bound N2 messenger tag as a function of delay times and phases between a set of three infrared pulses. Frequency-resolved spectra in the carbonyl stretch region show relatively strong bleaching signals that oscillate at the difference frequency between the two observed vibrational features as a function of the pump-probe waiting time. This observation is consistent with the presence of nonlinear pathways resulting from underlying cross-peak signals between the coupled symmetric-asymmetric C≡O stretch pair. The successful demonstration of frequency-resolved ultrafast transient vibrational action spectroscopy of dilute molecular ion ensembles provides an exciting, new framework for the study of molecular dynamics in isolated, complex molecular ion systems.
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Affiliation(s)
- Liangyi Chen
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, USA
| | - Zifan Ma
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, USA
| | - Joseph A Fournier
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, USA
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11
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Cao W, Yuan Q, Zhang H, Zhou X, Kass SR, Wang XB. How generic is iodide-tagging photoelectron spectroscopy: An extended investigation on the Gly·X- (Gly = glycine, X = Cl or Br) complexes. J Chem Phys 2023; 159:034305. [PMID: 37466228 DOI: 10.1063/5.0159326] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Accepted: 07/03/2023] [Indexed: 07/20/2023] Open
Abstract
We report a joint negative ion photoelectron spectroscopy (NIPES) and quantum chemical computational study on glycine-chloride/bromide complexes (denoted Gly·X-, X = Cl/Br) in close comparison to the previously studied Gly·I- cluster ion. Combining experimental NIPE spectra and theoretical calculations, various Gly·X- complexes were found to adopt the same types of low-lying isomers, albeit with different relative energies. Despite more congested spectral profiles for Gly·Cl- and Gly·Br-, spectral assignments were accomplished with the guidance of the knowledge learned from Gly·I-, where a larger spin-orbit splitting of iodine afforded well-resolved, recognizable spectral peaks. Three canonical plus one zwitterionic isomer for Gly·Cl- and four canonical conformers for Gly·Br- were experimentally identified and characterized in contrast to the five canonical ones observed for Gly·I- under similar experimental conditions. Taken together, this study investigates both genericity and variations in binding patterns for the complexes composed of glycine and various halides, demonstrating that iodide-tagging is an effective spectroscopic means to unravel diverse ion-molecule binding motifs for cluster anions with congested spectral bands by substituting the respective ion with iodide.
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Affiliation(s)
- Wenjin Cao
- Physical Sciences Division, Pacific Northwest National Laboratory, Richland, Washington 99352, USA
| | - Qinqin Yuan
- Physical Sciences Division, Pacific Northwest National Laboratory, Richland, Washington 99352, USA
- Key Laboratory of Structure and Functional Regulation of Hybrid Materials (Ministry of Education), Department of Chemistry, Anhui University, Hefei 230601, China
| | - Hanhui Zhang
- Physical Sciences Division, Pacific Northwest National Laboratory, Richland, Washington 99352, USA
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, University of Science and Technology of China, Hefei, Anhui 230026, People's Republic of China
| | - Xiaoguo Zhou
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, University of Science and Technology of China, Hefei, Anhui 230026, People's Republic of China
| | - Steven R Kass
- Department of Chemistry, University of Minnesota, Minneapolis, Minnesota 55455, USA
| | - Xue-Bin Wang
- Physical Sciences Division, Pacific Northwest National Laboratory, Richland, Washington 99352, USA
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12
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Fielicke A. Probing the binding and activation of small molecules by gas-phase transition metal clusters via IR spectroscopy. Chem Soc Rev 2023. [PMID: 37162518 DOI: 10.1039/d2cs00104g] [Citation(s) in RCA: 21] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
Isolated transition metal clusters have been established as useful models for extended metal surfaces or deposited metal particles, to improve the understanding of their surface chemistry and of catalytic reactions. For this objective, an important milestone has been the development of experimental methods for the size-specific structural characterization of clusters and cluster complexes in the gas phase. This review focusses on the characterization of molecular ligands, their binding and activation by small transition metal clusters, using cluster-size specific infrared action spectroscopy. A comprehensive overview and a critical discussion of the experimental data available to date is provided, reaching from the initial results obtained using line-tuneable CO2 lasers to present-day studies applying infrared free electron lasers as well as other intense and broadly tuneable IR laser sources.
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Affiliation(s)
- André Fielicke
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, 14195 Berlin, Germany.
- Institut für Optik und Atomare Physik, Technische Universität Berlin, 10623 Berlin, Germany
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13
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Satterthwaite L, Koumarianou G, Carroll PB, Sedlik RJ, Wang I, McCarthy MC, Patterson D. Low-Temperature Gas-Phase Kinetics of Ethanol-Methanol Heterodimer Formation. J Phys Chem A 2023; 127:4096-4102. [PMID: 37119198 PMCID: PMC10184117 DOI: 10.1021/acs.jpca.3c01312] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/01/2023]
Abstract
The structures of gas-phase noncovalently bound clusters have long been studied in supersonic expansions. This method of study, while providing a wealth of information about the nature of noncovalent bonds, precludes observation of the formation of the cluster, as the clusters form just after the orifice of the pulsed valve. Here, we directly observe formation of ethanol-methanol dimers via microwave spectroscopy in a controlled cryogenic environment. Time profiles of the concentration of reagents in the cell yielded gas-phase reaction rate constants of kMe-g = (2.8 ± 1.4) × 10-13 cm3 molecule-1 s-1 and kMe-t = (1.6 ± 0.8) × 10-13 cm3 molecule-1 s-1 for the pseudo-second-order ethanol-methanol dimerization reaction at 8 K. The relaxation cross section between the gauche and trans conformers of ethanol was also measured using the same technique. In addition, thermodynamic relaxation between conformers of ethanol over time allowed for selection of conformer stoichiometry in the ethanol-methanol dimerization reaction, but no change in the ratio of dimer conformers was observed with changing ethanol monomer stoichiometry.
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Affiliation(s)
- Lincoln Satterthwaite
- Department of Chemistry and Biochemistry, Building 232, University of California, Santa Barbara, California 93106, United States
| | - Greta Koumarianou
- Department of Chemistry and Biochemistry, Building 232, University of California, Santa Barbara, California 93106, United States
| | - P Brandon Carroll
- Center for Astrophysics | Harvard & Smithsonian, 60 Garden Street, Cambridge, Massachusetts 02138, United States
| | - Robert J Sedlik
- Physics Department, Broida Hall, University of California, Santa Barbara, California 93106, United States
| | - Irene Wang
- Physics Department, Broida Hall, University of California, Santa Barbara, California 93106, United States
| | - Michael C McCarthy
- Center for Astrophysics | Harvard & Smithsonian, 60 Garden Street, Cambridge, Massachusetts 02138, United States
| | - David Patterson
- Physics Department, Broida Hall, University of California, Santa Barbara, California 93106, United States
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14
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Neumark DM. Spectroscopy of Radicals, Clusters, and Transition States Using Slow Electron Velocity-Map Imaging of Cryogenically Cooled Anions. J Phys Chem A 2023; 127:4207-4223. [PMID: 37094039 DOI: 10.1021/acs.jpca.3c01537] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Slow electron velocity-map imaging of cryogenically cooled anions (cryo-SEVI) is a high-resolution variant of anion photoelectron spectroscopy that has been applied with considerable success over the years to the study of radicals, size-selected clusters, and transition states for unimolecular and bimolecular reactions. Cryo-SEVI retains the versatility of conventional anion photoelectron spectroscopy while offering sub-meV resolution, thereby enabling the resolution of vibrational structure in the photoelectron spectra of complex anions. This Feature Article describes recent experiments in our laboratory using cryo-SEVI, including a new research direction in which anions are vibrationally pre-excited with an infrared laser pulse prior to photodetachment.
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Affiliation(s)
- Daniel M Neumark
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
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15
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Li ZY, Horn F, Li Y, Mou LH, Schöllkopf W, Chen H, He SG, Asmis KR. Dinitrogen Activation in the Gas Phase: Spectroscopic Characterization of C-N Coupling in the V 3 C + +N 2 Reaction. Chemistry 2023; 29:e202203384. [PMID: 36511849 DOI: 10.1002/chem.202203384] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2022] [Revised: 12/11/2022] [Accepted: 12/12/2022] [Indexed: 12/15/2022]
Abstract
We report on cluster-mediated C-N bond formation in the gas phase using N2 as a nitrogen source. The V3 C+ +N2 reaction is studied by a combination of ion-trap mass spectrometry with infrared photodissociation (IRPD) spectroscopy and complemented by electronic structure calculations. The proposed reaction mechanism is spectroscopically validated by identifying the structures of the reactant and product ions. V3 C+ exhibits a pyramidal structure of C1 -symmetry. N2 activation is initiated by adsorption in an end-on fashion at a vanadium site, followed by spontaneous cleavage of the N≡N triple bond and subsequent C-N coupling. The IRPD spectrum of the metal nitride product [NV3 (C=N)]+ exhibits characteristic C=N double bond (1530 cm-1 ) and V-N single bond (770, 541 and 522 cm-1 ) stretching bands.
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Affiliation(s)
- Zi-Yu Li
- State Key Laboratory for Structural Chemistry of, Unstable and Stable Species, Institution of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China.,Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195, Berlin, Germany
| | - Francine Horn
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstrasse 2, 04103, Leipzig, Germany.,Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195, Berlin, Germany
| | - Yao Li
- CAS Key Laboratory of Photochemistry, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China.,University of Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Li-Hui Mou
- State Key Laboratory for Structural Chemistry of, Unstable and Stable Species, Institution of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China
| | - Wieland Schöllkopf
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195, Berlin, Germany
| | - Hui Chen
- CAS Key Laboratory of Photochemistry, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China.,University of Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Sheng-Gui He
- State Key Laboratory for Structural Chemistry of, Unstable and Stable Species, Institution of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China.,University of Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Knut R Asmis
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstrasse 2, 04103, Leipzig, Germany
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16
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Kotobi A, Schwob L, Vonbun-Feldbauer GB, Rossi M, Gasparotto P, Feiler C, Berden G, Oomens J, Oostenrijk B, Scuderi D, Bari S, Meißner RH. Reconstructing the infrared spectrum of a peptide from representative conformers of the full canonical ensemble. Commun Chem 2023; 6:46. [PMID: 36869192 PMCID: PMC9984374 DOI: 10.1038/s42004-023-00835-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2022] [Accepted: 02/08/2023] [Indexed: 03/05/2023] Open
Abstract
Leucine enkephalin (LeuEnk), a biologically active endogenous opioid pentapeptide, has been under intense investigation because it is small enough to allow efficient use of sophisticated computational methods and large enough to provide insights into low-lying minima of its conformational space. Here, we reproduce and interpret experimental infrared (IR) spectra of this model peptide in gas phase using a combination of replica-exchange molecular dynamics simulations, machine learning, and ab initio calculations. In particular, we evaluate the possibility of averaging representative structural contributions to obtain an accurate computed spectrum that accounts for the corresponding canonical ensemble of the real experimental situation. Representative conformers are identified by partitioning the conformational phase space into subensembles of similar conformers. The IR contribution of each representative conformer is calculated from ab initio and weighted according to the population of each cluster. Convergence of the averaged IR signal is rationalized by merging contributions in a hierarchical clustering and the comparison to IR multiple photon dissociation experiments. The improvements achieved by decomposing clusters containing similar conformations into even smaller subensembles is strong evidence that a thorough assessment of the conformational landscape and the associated hydrogen bonding is a prerequisite for deciphering important fingerprints in experimental spectroscopic data.
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Affiliation(s)
- Amir Kotobi
- Deutsches Elektronen-Synchrotron DESY, Hamburg, Germany
| | - Lucas Schwob
- Deutsches Elektronen-Synchrotron DESY, Hamburg, Germany.
| | | | - Mariana Rossi
- Max Planck Institute for the Structure and Dynamics of Matter, Hamburg, Germany
| | - Piero Gasparotto
- Scientific Computing Division, Paul Scherrer Institute, Villigen, Switzerland
| | - Christian Feiler
- Helmholtz-Zentrum Hereon, Institute of Surface Science, Geesthacht, Germany
| | - Giel Berden
- Radboud University, Institute for Molecules and Materials, FELIX Laboratory, Nijmegen, The Netherlands
| | - Jos Oomens
- Radboud University, Institute for Molecules and Materials, FELIX Laboratory, Nijmegen, The Netherlands
| | - Bart Oostenrijk
- Deutsches Elektronen-Synchrotron DESY, Hamburg, Germany
- The Hamburg Centre for Ultrafast Imaging, Hamburg, Germany
| | - Debora Scuderi
- Institut de Chimie Physique, CNRS UMR8000, Université Paris-Saclay, Orsay, France
| | - Sadia Bari
- Deutsches Elektronen-Synchrotron DESY, Hamburg, Germany.
- The Hamburg Centre for Ultrafast Imaging, Hamburg, Germany.
- Zernike Institute for Advanced Materials, University of Groningen, Groningen, The Netherlands.
| | - Robert H Meißner
- Helmholtz-Zentrum Hereon, Institute of Surface Science, Geesthacht, Germany.
- Hamburg University of Technology, Institute of Polymers and Composites, Hamburg, Germany.
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17
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van der Linde C, Ončák M, Cunningham EM, Tang WK, Siu CK, Beyer MK. Surface or Internal Hydration - Does It Really Matter? JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2023; 34:337-354. [PMID: 36744598 PMCID: PMC9983018 DOI: 10.1021/jasms.2c00290] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Revised: 01/26/2023] [Accepted: 01/26/2023] [Indexed: 06/18/2023]
Abstract
The precise location of an ion or electron, whether it is internally solvated or residing on the surface of a water cluster, remains an intriguing question. Subtle differences in the hydrogen bonding network may lead to a preference for one or the other. Here we discuss spectroscopic probes of the structure of gas-phase hydrated ions in combination with quantum chemistry, as well as H/D exchange as a means of structure elucidation. With the help of nanocalorimetry, we look for thermochemical signatures of surface vs internal solvation. Examples of strongly size-dependent reactivity are reviewed which illustrate the influence of surface vs internal solvation on unimolecular rearrangements of the cluster, as well as on the rate and product distribution of ion-molecule reactions.
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Affiliation(s)
- Christian van der Linde
- Institut
für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstraße 25, 6020Innsbruck, Austria
| | - Milan Ončák
- Institut
für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstraße 25, 6020Innsbruck, Austria
| | - Ethan M. Cunningham
- Institut
für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstraße 25, 6020Innsbruck, Austria
| | - Wai Kit Tang
- Institute
of Research Management and Services (IPPP), Research and Innovation
Management Complex, University of Malaya, Kuala Lumpur50603, Malaysia
| | - Chi-Kit Siu
- Department
of Chemistry, City University of Hong Kong, 83 Tat Chee Avenue, Kowloon Tong, Hong Kong SAR, PR China
| | - Martin K. Beyer
- Institut
für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstraße 25, 6020Innsbruck, Austria
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18
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Jin J, Wulf T, Jorewitz M, Heine T, Asmis KR. Vibrational spectroscopy of Cu +(H 2) 4: about anharmonicity and fluxionality. Phys Chem Chem Phys 2023; 25:5262-5270. [PMID: 36723211 DOI: 10.1039/d2cp05802b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Abstract
The vibrational spectra of the copper(I) cation-dihydrogen complexes Cu+(H2)4, Cu+(D2)4 and Cu+(D2)3H2 are studied using cryogenic ion trap vibrational spectroscopy in combination with quantum chemical calculations. The infrared photodissociation (IRPD) spectra (2500-7300 cm-1) are assigned based on a comparison to IR spectra calculated using vibrational second-order perturbation theory (VPT2). The IRPD spectra exhibit ≈60 cm-1 broad bands that lack rotational resolution, indicative of rather floppy complexes even at an ion trap temperature of 10 K. The observed vibrational features are assigned to the excitations of dihydrogen stretching fundamentals, combination bands of these fundamentals with low energy excitations as well as overtone excitations of a minimum-energy structure with Cs symmetry. The three distinct dihydrogen positions present in the structure can interconvert via pseudorotations with energy barriers less than 10 cm-1, far below the zero-point vibrational energy. Ab initio Born-Oppenheimer molecular dynamics (BOMD) simulations confirm the fluxional behavior of these complexes and yield an upper limit for the timeframe of the pseudorotation on the order of 10 ps. For Cu+(D2)3H2, the H2 and D2 loss channels yield different IRPD spectra indicating non-ergodic behavior.
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Affiliation(s)
- Jiaye Jin
- Wilhelm-Ostwald-Institut für Physikalische und Theoretisch Chemie, Universität Leipzig, Linnéstr. 2, 04103, Leipzig, Germany.
| | - Toshiki Wulf
- Wilhelm-Ostwald-Institut für Physikalische und Theoretisch Chemie, Universität Leipzig, Linnéstr. 2, 04103, Leipzig, Germany. .,Institute of Resource Ecology, Research Site Leipzig, Helmholtz-Zentrum Dresden-Rossendorf, Permoserstr. 15, 04318, Leipzig, Germany.,Faculty of Chemistry and Food Chemistry, School of Science, TU Dresden, 01062, Dresden, Germany.
| | - Marcel Jorewitz
- Wilhelm-Ostwald-Institut für Physikalische und Theoretisch Chemie, Universität Leipzig, Linnéstr. 2, 04103, Leipzig, Germany.
| | - Thomas Heine
- Institute of Resource Ecology, Research Site Leipzig, Helmholtz-Zentrum Dresden-Rossendorf, Permoserstr. 15, 04318, Leipzig, Germany.,Faculty of Chemistry and Food Chemistry, School of Science, TU Dresden, 01062, Dresden, Germany.
| | - Knut R Asmis
- Wilhelm-Ostwald-Institut für Physikalische und Theoretisch Chemie, Universität Leipzig, Linnéstr. 2, 04103, Leipzig, Germany.
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19
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Molina FL, Jara-Toro RA, Noble JA, Dedonder-Lardeux C, Jouvet C, Pino GA. Photodetachment of Deprotonated R-Mandelic Acid: The Role of Proton Delocalization on the Radical Stability. Chemphyschem 2023; 24:e202200324. [PMID: 36000956 DOI: 10.1002/cphc.202200324] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2022] [Revised: 08/23/2022] [Indexed: 01/05/2023]
Abstract
The photodetachment and stability of R-Mandelate, the deprotonated form of the R-Mandelic acid, was investigated by observing the neutral species issued from either simple photodetachment or dissociative photodetachment in a cold anions set-up. R-Mandalate has the possibility to form an intramolecular ionic hydrogen-bond between adjacent hydroxyl and carboxylate groups. The potential energy surface along the proton transfer (PT) coordinate between both groups (O- …H+ …- OCO) features a single local minima, with the proton localized on the O- group (OH…- OCO). However, the structure with the proton localized on the - OCO group (O- …HOCO) is also observed because it falls within the extremity of the vibrational wavefunction of the OH…- OCO isomer along the PT coordinate. The stability of the corresponding radicals, produced upon photodetachment, is strongly dependent on the position of the proton in the anion: the radicals produced from the OH…- OCO isomer decarboxylate without barrier, while the radicals produced from the O- …HOCO isomer are stable.
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Affiliation(s)
- Franco L Molina
- INFIQC: Instituto de Investigaciones en Fisicoquímica de Córdoba (CONICET - UNC) -, Haya de la Torre s/n, Ciudad Universitaria, X5000HUA, Córdoba, Argentina.,Departamento de Fisicoquímica, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba -, Haya de la Torre y Medina Allende, Ciudad Universitaria, X5000HUA, Córdoba, Argentina.,Centro Láser de Ciencias Moleculares -, Universidad Nacional de Córdoba, Haya de la Torre s/n, Pabellón Argentina, Ciudad Universitaria, X5000HUA, Córdoba, Argentina
| | - Rafael A Jara-Toro
- INFIQC: Instituto de Investigaciones en Fisicoquímica de Córdoba (CONICET - UNC) -, Haya de la Torre s/n, Ciudad Universitaria, X5000HUA, Córdoba, Argentina.,Departamento de Fisicoquímica, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba -, Haya de la Torre y Medina Allende, Ciudad Universitaria, X5000HUA, Córdoba, Argentina.,Centro Láser de Ciencias Moleculares -, Universidad Nacional de Córdoba, Haya de la Torre s/n, Pabellón Argentina, Ciudad Universitaria, X5000HUA, Córdoba, Argentina
| | - Jennifer A Noble
- Physique des Interactions Ioniques et Moléculaires (PIIM), CNRS, Aix-Marseille Université, 13397, Marseille, France
| | - Claude Dedonder-Lardeux
- Physique des Interactions Ioniques et Moléculaires (PIIM), CNRS, Aix-Marseille Université, 13397, Marseille, France
| | - Christophe Jouvet
- Physique des Interactions Ioniques et Moléculaires (PIIM), CNRS, Aix-Marseille Université, 13397, Marseille, France
| | - Gustavo A Pino
- INFIQC: Instituto de Investigaciones en Fisicoquímica de Córdoba (CONICET - UNC) -, Haya de la Torre s/n, Ciudad Universitaria, X5000HUA, Córdoba, Argentina.,Departamento de Fisicoquímica, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba -, Haya de la Torre y Medina Allende, Ciudad Universitaria, X5000HUA, Córdoba, Argentina.,Centro Láser de Ciencias Moleculares -, Universidad Nacional de Córdoba, Haya de la Torre s/n, Pabellón Argentina, Ciudad Universitaria, X5000HUA, Córdoba, Argentina
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20
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Li H. The solvation of SOH group in hydrated HSO 4−(H 2O) n clusters. JOURNAL OF CHEMICAL RESEARCH 2023. [DOI: 10.1177/17475198231153994] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/11/2023]
Abstract
The S=O stretching and SOH bending peaks in the vibrational spectra of HSO4−(H2O) n, with n up to 6, are analyzed by both harmonic analysis and ab initio molecular dynamics simulation. The SOH bending mode is found to be much more sensitive to the extent of hydration and to the fluctuation of hydrogen bonds than the S=O stretching mode. The SOH donor hydrogen bond is gradually stabilized by n = 4, and further shortened up to n = 6, which is the key factor to understand the trend of evolution observed in the infrared multiple photon dissociation spectra.
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Affiliation(s)
- Huiyan Li
- Jiangsu Key Laboratory for Biofunctional Molecules, College of Life Science and Chemistry, Jiangsu Second Normal University, Nanjing, China
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21
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Chakraborty A, Brumme T, Schmahl S, Weiske H, Baldauf C, Asmis KR. Impact of anion polarizability on ion pairing in microhydrated salt clusters. Chem Sci 2022; 13:13187-13200. [PMID: 36425505 PMCID: PMC9668056 DOI: 10.1039/d2sc03431j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2022] [Accepted: 09/28/2022] [Indexed: 09/08/2024] Open
Abstract
Despite longstanding interest in the mechanism of salt dissolution in aqueous media, a molecular level understanding remains incomplete. Here, cryogenic ion trap vibrational action spectroscopy is combined with electronic structure calculations to track salt hydration in a gas phase model system one water molecule at a time. The infrared photodissociation spectra of microhydrated lithium dihalide anions [LiXX'(H2O) n ]- (XX' = I2, ClI and Cl2; n = 1-3) in the OH stretching region (3800-2800 cm-1) provide a detailed picture of how anion polarizability influences the competition among ion-ion, ion-water and water-water interactions. While exclusively contact ion pairs are observed for n = 1, the formation of solvent-shared ion pairs, identified by markedly red-shifted OH stretching bands (<3200 cm-1), originating from the bridging water molecules, is favored already for n = 2. For n = 3, Li+ reaches its maximum coordination number of four only in [LiI2(H2O)3]-, in accordance with the hard and soft Lewis acid and base principle. Water-water hydrogen bond formation leads to a different solvent-shared ion pair motif in [LiI2(H2O)3]- and network formation even restabilizes the contact ion pair motif in [LiCl2(H2O)3]-. Structural assignments are exclusively possible after the consideration of anharmonic effects. Molecular dynamics simulations confirm that the significance of large amplitude motion (of the water molecules) increases with increasing anion polarizability and that needs to be considered already at cryogenic temperatures.
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Affiliation(s)
- Arghya Chakraborty
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig Linnéstrasse 2 D-04103 Leipzig Germany
| | - Thomas Brumme
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig Linnéstrasse 2 D-04103 Leipzig Germany
- Theoretische Chemie, Technische Universität Dresden Dresden Germany
| | - Sonja Schmahl
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig Linnéstrasse 2 D-04103 Leipzig Germany
| | - Hendrik Weiske
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig Linnéstrasse 2 D-04103 Leipzig Germany
| | - Carsten Baldauf
- Fritz-Haber-Institut der Max-Planck-Gesellschaft Berlin Germany
| | - Knut R Asmis
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig Linnéstrasse 2 D-04103 Leipzig Germany
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22
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Debnath S, Jorewitz M, Asmis KR, Müller F, Stückrath JB, Bischoff FA, Sauer J. Infrared photodissociation spectroscopy of (Al 2O 3) 2-5FeO +: influence of Fe-substitution on small alumina clusters. Phys Chem Chem Phys 2022; 24:20913-20920. [PMID: 36017635 DOI: 10.1039/d2cp02938c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The infrared photodissociation spectra of He-tagged (Al2O3)nFeO+ (n = 2-5), are reported in the Al-O and Fe-O stretching and bending spectral region (430-1200 cm-1) and assigned based on calculated harmonic IR spectra from density functional theory (DFT). The substitution of Fe for an Al center occurs preferentially at 3-fold oxygen coordination sites located at the cluster rim and with the Fe atom in the +III oxidation state. The accompanying elongation of metal oxygen bonds leaves the Al-O network structure nearly unperturbed (isomorphous substitution). Contrary to the Al2FeO4+ (n = 1), valence isomerism is not observed, which is attributed to a smaller M:O ratio (M = Al, Fe) and consequently decreasing electron affinities with increasing cluster size.
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Affiliation(s)
- Sreekanta Debnath
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstrasse 2, 04103 Leipzig, Germany. .,Fritz-Haber-Institut der Max-Plank-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Marcel Jorewitz
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstrasse 2, 04103 Leipzig, Germany.
| | - Knut R Asmis
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstrasse 2, 04103 Leipzig, Germany.
| | - Fabian Müller
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstrasse 2, 04103 Leipzig, Germany. .,Fritz-Haber-Institut der Max-Plank-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany.,Institut für Chemie, Humboldt-Universität zu Berlin, Unter den Linden 6, 10099 Berlin, Germany.
| | - Julius B Stückrath
- Institut für Chemie, Humboldt-Universität zu Berlin, Unter den Linden 6, 10099 Berlin, Germany.
| | - Florian A Bischoff
- Institut für Chemie, Humboldt-Universität zu Berlin, Unter den Linden 6, 10099 Berlin, Germany.
| | - Joachim Sauer
- Institut für Chemie, Humboldt-Universität zu Berlin, Unter den Linden 6, 10099 Berlin, Germany.
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23
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Li Y, Müller F, Schöllkopf W, Asmis KR, Sauer J. Gas-Phase Mechanism of O .- /Ni 2+ -Mediated Methane Conversion to Formaldehyde. Angew Chem Int Ed Engl 2022; 61:e202202297. [PMID: 35460320 PMCID: PMC9400983 DOI: 10.1002/anie.202202297] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2022] [Indexed: 01/05/2023]
Abstract
The gas-phase reaction of NiAl2 O4 + with CH4 is studied by mass spectrometry in combination with vibrational action spectroscopy and density functional theory (DFT). Two product ions, NiAl2 O4 H+ and NiAl2 O3 H2 + , are identified in the mass spectra. The DFT calculations predict that the global minimum-energy isomer of NiAl2 O4 + contains Ni in the +II oxidation state and features a terminal Al-O.- oxygen radical site. They show that methane can react along two competing pathways leading to formation of either a methyl radical (CH3 ⋅) or formaldehyde (CH2 O). Both reactions are initiated by hydrogen atom transfer from methane to the terminal O.- site, followed by either CH3 ⋅ loss or CH3 ⋅ migration to an O2- site next to the Ni2+ center. The CH3 ⋅ attaches as CH3 + to O2- and its unpaired electron is transferred to the Ni-center reducing it to Ni+ . The proposed mechanism is experimentally confirmed by vibrational spectroscopy of the reactant and two different product ions.
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Affiliation(s)
- Ya‐Ke Li
- Wilhelm-Ostwald Institut für Physikalische und Theoretische ChemieUniversität LeipzigLinnéstr. 204103LeipzigGermany
- Fritz-Haber-Institut der Max-Planck-GesellschaftFaradayweg 4–614195BerlinGermany
- Present address: Green Catalysis Center and College of ChemistryZhengzhou UniversityZhengzhou450001China
| | - Fabian Müller
- Wilhelm-Ostwald Institut für Physikalische und Theoretische ChemieUniversität LeipzigLinnéstr. 204103LeipzigGermany
- Fritz-Haber-Institut der Max-Planck-GesellschaftFaradayweg 4–614195BerlinGermany
- Institut für ChemieHumboldt-Universität zu BerlinUnter den Linden 610099BerlinGermany
| | - Wieland Schöllkopf
- Fritz-Haber-Institut der Max-Planck-GesellschaftFaradayweg 4–614195BerlinGermany
| | - Knut R. Asmis
- Wilhelm-Ostwald Institut für Physikalische und Theoretische ChemieUniversität LeipzigLinnéstr. 204103LeipzigGermany
| | - Joachim Sauer
- Institut für ChemieHumboldt-Universität zu BerlinUnter den Linden 610099BerlinGermany
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24
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Sherman SL, Fischer KC, Garand E. Conformational Changes Induced by Methyl Side-Chains in Protonated Tripeptides Containing Glycine and Alanine Residues. J Phys Chem A 2022; 126:4036-4045. [PMID: 35700447 DOI: 10.1021/acs.jpca.2c02584] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Abstract
We present a systematic study of the conformational and isomeric populations in gas-phase protonated tripeptides containing glycine and alanine residues using infrared predissociation spectroscopy of cryogenically cooled ions. Specifically, the protonated forms of Gly-Gly-Gly, Ala-Gly-Gly, Gly-Ala-Gly, Gly-Gly-Ala, Ala-Ala-Gly, Ala-Gly-Ala, Gly-Ala-Ala, and Ala-Ala-Ala allow us to sample all permutations of the methyl side-chain position, providing a comprehensive view of the effects of this simple side-chain on the 3-D structure of the peptide. The individual structural populations for all but one of these peptide species are determined via conformer-specific IR-IR double-resonance spectroscopy and comparison with electronic structure predictions. The observed structures can be classified into three main families defined by the protonation site and the number of internal hydrogen bonds. The relative contribution of each structural family is highly dependent on the exact amino acid sequence of the tripeptide. These observed changes in structural population can be rationalized in terms of the electron-donating effect of the methyl side-chain modulating the local proton affinities of the amine and various carbonyl groups in the tripeptide.
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Affiliation(s)
- Summer L Sherman
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, Wisconsin 53706, United States
| | - Kaitlyn C Fischer
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, Wisconsin 53706, United States
| | - Etienne Garand
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, Wisconsin 53706, United States
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25
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Wang C, Fu L, Yang S, Zheng H, Wang T, Gao J, Su M, Yang J, Wu G, Zhang W, Zhang Z, Li G, Zhang DH, Jiang L, Yang X. Infrared Spectroscopy of Stepwise Hydration Motifs of Sulfur Dioxide. J Phys Chem Lett 2022; 13:5654-5659. [PMID: 35708351 DOI: 10.1021/acs.jpclett.2c01472] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Experimental characterization of microscopic events and behaviors of SO2-H2O interactions is crucial to understanding SO2 atmospheric chemistry but has been proven to be very challenging due to the difficulty in size selection. Here, size-dependent development of SO2 hydrate structure and cluster growth in the SO2(H2O)n (n = 1-16) complexes was probed by infrared spectroscopy based on threshold photoionization using a tunable vacuum ultraviolet free electron laser. Spectral changes with cluster size demonstrate that the sandwich structure initially formed at n = 1 develops into cycle structures with the sulfur and oxygen atoms in a two-dimensional plane (n = 2 and 3) and then into three-dimensional cage structures (n ≥ 4). SO2 is favorably bound to the surface of larger water clusters. These stepwise features of SO2 hydration on various sized water clusters contribute to understanding the reactive sites and electrophilicity of SO2 on cloud droplets, which may have important atmospheric implications for studying the SO2-containing aerosol systems.
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Affiliation(s)
- Chong Wang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
- University of Chinese Academy of Sciences, 19A Yuquan Road, Beijing 100049, China
| | - Liangfei Fu
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
- University of Chinese Academy of Sciences, 19A Yuquan Road, Beijing 100049, China
| | - Shuo Yang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Huijun Zheng
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
- University of Chinese Academy of Sciences, 19A Yuquan Road, Beijing 100049, China
| | - Tiantong Wang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
- University of Chinese Academy of Sciences, 19A Yuquan Road, Beijing 100049, China
| | - Jiao Gao
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Mingzhi Su
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
- University of Chinese Academy of Sciences, 19A Yuquan Road, Beijing 100049, China
| | - Jiayue Yang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Guorong Wu
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Weiqing Zhang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Zhaojun Zhang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Gang Li
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Dong H Zhang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
- Hefei National Laboratory, Hefei 230088, China
| | - Ling Jiang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
- Hefei National Laboratory, Hefei 230088, China
| | - Xueming Yang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
- Hefei National Laboratory, Hefei 230088, China
- Department of Chemistry, Southern University of Science and Technology, Shenzhen 518055, China
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26
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Li Y, Müller F, Schöllkopf W, Asmis KR, Sauer J. Gas‐Phase Mechanism of O
.−
/Ni
2+
‐Mediated Methane Conversion to Formaldehyde. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202202297] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Ya‐Ke Li
- Wilhelm-Ostwald Institut für Physikalische und Theoretische Chemie Universität Leipzig Linnéstr. 2 04103 Leipzig Germany
- Fritz-Haber-Institut der Max-Planck-Gesellschaft Faradayweg 4–6 14195 Berlin Germany
- Present address: Green Catalysis Center and College of Chemistry Zhengzhou University Zhengzhou 450001 China
| | - Fabian Müller
- Wilhelm-Ostwald Institut für Physikalische und Theoretische Chemie Universität Leipzig Linnéstr. 2 04103 Leipzig Germany
- Fritz-Haber-Institut der Max-Planck-Gesellschaft Faradayweg 4–6 14195 Berlin Germany
- Institut für Chemie Humboldt-Universität zu Berlin Unter den Linden 6 10099 Berlin Germany
| | - Wieland Schöllkopf
- Fritz-Haber-Institut der Max-Planck-Gesellschaft Faradayweg 4–6 14195 Berlin Germany
| | - Knut R. Asmis
- Wilhelm-Ostwald Institut für Physikalische und Theoretische Chemie Universität Leipzig Linnéstr. 2 04103 Leipzig Germany
| | - Joachim Sauer
- Institut für Chemie Humboldt-Universität zu Berlin Unter den Linden 6 10099 Berlin Germany
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27
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Zelenka J, Pereverzev A, Jahn U, Roithová J. Sulfonyl Nitrene and Amidyl Radical: Structure and Reactivity. Chemistry 2022; 28:e202104493. [PMID: 35266598 PMCID: PMC9323475 DOI: 10.1002/chem.202104493] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2021] [Indexed: 11/10/2022]
Abstract
Photocatalytic generation of nitrenes and radicals can be used to tune or even control their reactivity. Photocatalytic activation of sulfonyl azides leads to the elimination of N2 and the resulting reactive species initiate C−H activations and amide formation reactions. Here, we present reactive radicals that are generated from sulfonyl azides: sulfonyl nitrene radical anion, sulfonyl nitrene and sulfonyl amidyl radical, and test their gas phase reactivity in C−H activation reactions. The sulfonyl nitrene radical anion is the least reactive and its reactivity is governed by the proton coupled electron transfer mechanism. In contrast, sulfonyl nitrene and sulfonyl amidyl radicals react via hydrogen atom transfer pathways. These reactivities and detailed characterization of the radicals with vibrational spectroscopy and with DFT calculations provide information necessary for taking control over the reactivity of these intermediates.
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Affiliation(s)
- Jan Zelenka
- Department of Spectroscopy and Catalysis Institute for Molecules and Materials Radboud University Nijmegen, Heyendaalseweg 135 6525 AJ Nijmegen The Netherlands
| | - Aleksandr Pereverzev
- Department of Spectroscopy and Catalysis Institute for Molecules and Materials Radboud University Nijmegen, Heyendaalseweg 135 6525 AJ Nijmegen The Netherlands
| | - Ullrich Jahn
- Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences Flemingovo náměstí 2 16610 Prague 6 Czech Republic
| | - Jana Roithová
- Department of Spectroscopy and Catalysis Institute for Molecules and Materials Radboud University Nijmegen, Heyendaalseweg 135 6525 AJ Nijmegen The Netherlands
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28
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Pereverzev A, Roithová J. Experimental techniques and terminology in gas-phase ion spectroscopy. JOURNAL OF MASS SPECTROMETRY : JMS 2022; 57:e4826. [PMID: 35434805 PMCID: PMC9285946 DOI: 10.1002/jms.4826] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/26/2020] [Revised: 03/24/2022] [Accepted: 03/31/2022] [Indexed: 06/01/2023]
Abstract
This perspective gives an overview of the action spectroscopy methods for measurements of electronic, vibrational, and rotational spectra of mass-selected ions in the gas phase. We classify and give a short overview of the existing experimental approaches in this field. There is currently a plethora of names used for, essentially, the same techniques. Hence within this overview, we scrutinized the notations and suggested terms to be generally used. The selection was either driven by making the name unique and straightforward or the term being the most broadly used one. We believe that a simplification and a unification of the notation in ion spectroscopy can make this field better accessible for experts outside the mass spectrometry community where the applications of gas-phase action ion spectroscopy can make a large impact.
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Affiliation(s)
| | - Jana Roithová
- Institute for Molecules and MaterialsRadboud UniversityNijmegenThe Netherlands
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29
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Heller J, Cunningham EM, van der Linde C, Ončák M, Beyer MK. Infrared Multiple Photon Dissociation Spectroscopy Confirms Reversible Water Activation in Mn +(H 2O) n, n ≤ 8. J Phys Chem Lett 2022; 13:3269-3275. [PMID: 35389219 PMCID: PMC9014459 DOI: 10.1021/acs.jpclett.2c00394] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2022] [Accepted: 03/24/2022] [Indexed: 06/14/2023]
Abstract
Controlled activation of water molecules is the key to efficient water splitting. Hydrated singly charged manganese ions Mn+(H2O)n exhibit a size-dependent insertion reaction, which is probed by infrared multiple photon dissociation spectroscopy (IRMPD) and FT-ICR mass spectrometry. The noninserted isomer of Mn+(H2O)4 is formed directly in the laser vaporization ion source, while its inserted counterpart HMnOH+(H2O)3 is selectively prepared by gentle removal of water molecules from larger clusters. The IRMPD spectra in the O-H stretch region of both systems are markedly different, and correlate very well with quantum chemical calculations of the respective species at the CCSD(T)/aug-cc-pVDZ//BHandHLYP/aug-cc-pVDZ level of theory. The calculated potential energy surface for water loss from HMnOH+(H2O)3 shows that this cluster ion is metastable. During IRMPD, the system rearranges back to the noninserted Mn+(H2O)3 structure, indicating that the inserted structure requires stabilization by hydration. The studied system serves as an atomically defined single-atom redox-center for reversible metal insertion into the O-H bond, a key step in metal-centered water activation.
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30
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Mayer M, Vankova N, Stolz F, Abel B, Heine T, Asmis KR. Identification of a Two-Coordinate Iron(I)-Oxalate Complex. Angew Chem Int Ed Engl 2022; 61:e202117855. [PMID: 35088489 PMCID: PMC9303725 DOI: 10.1002/anie.202117855] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2021] [Indexed: 12/16/2022]
Abstract
Exotic oxidation states of the first-row transition metals have recently attracted much interest. In order to investigate the oxidation states of a series of iron-oxalate complexes, an aqueous solution of iron(III) nitrate and oxalic acid was studied by infrared free liquid matrix-assisted laser desorption/ionization as well as ionspray mass spectrometry. Here, we show that iron is not only detected in its common oxidation states +II and +III, but also in its unusual oxidation state +I, detectable in both positive-ion and in negative-ion modes, respectively. Vibrational spectra of the gas phase anionic iron oxalate complexes [FeIII (C2 O4 )2 ]- , [FeII (C2 O4 )CO2 ]- , and [FeI (C2 O4 )]- were measured by means of infrared photodissociation spectroscopy and their structures were assigned by comparison to anharmonic vibrational spectra based on second-order perturbation theory.
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Affiliation(s)
- Martin Mayer
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische ChemieUniversität LeipzigLinnéstr. 204103LeipzigGermany
| | - Nina Vankova
- Theoretische ChemieTechnische Universität DresdenBergstr. 66c01062DresdenGermany
| | - Ferdinand Stolz
- Leibniz Institute for Surface Engineering (IOM)Permoserstr. 1504318LeipzigGermany
| | - Bernd Abel
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische ChemieUniversität LeipzigLinnéstr. 204103LeipzigGermany
- Leibniz Institute for Surface Engineering (IOM)Permoserstr. 1504318LeipzigGermany
| | - Thomas Heine
- Theoretische ChemieTechnische Universität DresdenBergstr. 66c01062DresdenGermany
- Helmholtz-Zentrum Dresden-RossendorfForschungsstelle LeipzigPermoserstr. 1504318LeipzigGermany
- Department of ChemistryYonsei UniversitySeodaemun-gu, Seoul120-749Republic of Korea
| | - Knut R. Asmis
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische ChemieUniversität LeipzigLinnéstr. 204103LeipzigGermany
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31
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Hirata K, Haddad F, Dopfer O, Ishiuchi SI, Fujii M. Collision-assisted stripping for determination of microsolvation-dependent protonation sites in hydrated clusters by cryogenic ion trap infrared spectroscopy: the case of benzocaineH +(H 2O) n. Phys Chem Chem Phys 2022; 24:5774-5779. [PMID: 35199812 DOI: 10.1039/d1cp05762f] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
The protonation site of molecules can be varied by their surrounding environment. Gas-phase studies, including the popular techniques of infrared spectroscopy and ion mobility spectrometry, are a powerful tool for the determination of protonation sites in solvated clusters but often suffer from inherent limits for larger hydrated clusters. Here, we present collision-assisted stripping infrared (CAS-IR) spectroscopy as a new technique to overcome these problems and apply it in a proof-of-principle experiment to hydrated clusters of protonated benzocaine (H+BC), which shows protonation-site switching depending on the degree of hydration. The most stable protomer of H+BC in the gas phase (O-protonated) is interconverted into its most stable protomer in aqueous solution (N-protonated) upon hydration with three water molecules. CAS-IR spectroscopy enables us to unambiguously assign protonation sites and quantitatively determine the relative abundance of various protomers.
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Affiliation(s)
- Keisuke Hirata
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, 226-8503, Japan. .,Department of Chemistry, School of Science, Tokyo Institute of Technology, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, Japan.,Tokyo Tech World Research Hub Initiative (WRHI), Institute of Innovation Research, Tokyo Institute of Technology, Nagatsuta-cho, Midori-ku, 4259, Yokohama, 226-8503, Japan.
| | - Fuad Haddad
- Institut für Optik und Atomare Physik, Technische Universität Berlin, Hardenbergstrasse 36, Berlin 10623, Germany
| | - Otto Dopfer
- Tokyo Tech World Research Hub Initiative (WRHI), Institute of Innovation Research, Tokyo Institute of Technology, Nagatsuta-cho, Midori-ku, 4259, Yokohama, 226-8503, Japan. .,Institut für Optik und Atomare Physik, Technische Universität Berlin, Hardenbergstrasse 36, Berlin 10623, Germany
| | - Shun-Ichi Ishiuchi
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, 226-8503, Japan. .,Department of Chemistry, School of Science, Tokyo Institute of Technology, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, Japan.,Tokyo Tech World Research Hub Initiative (WRHI), Institute of Innovation Research, Tokyo Institute of Technology, Nagatsuta-cho, Midori-ku, 4259, Yokohama, 226-8503, Japan.
| | - Masaaki Fujii
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, 226-8503, Japan. .,Tokyo Tech World Research Hub Initiative (WRHI), Institute of Innovation Research, Tokyo Institute of Technology, Nagatsuta-cho, Midori-ku, 4259, Yokohama, 226-8503, Japan. .,School of Life Science and Technology, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, Kanagawa, 226-8503, Japan
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32
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Mayer M, Vankova N, Stolz F, Abel B, Heine T, Asmis KR. Identification of a Two‐Coordinate Iron(I)‐Oxalate Complex. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202117855] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Martin Mayer
- Universität Leipzig: Universitat Leipzig Wilhelm-Ostwald-Institut GERMANY
| | - Nina Vankova
- Technische Universität Dresden: Technische Universitat Dresden Theoretische Chemie GERMANY
| | - Ferdinand Stolz
- Leibniz Institute for Surface Modification: Leibniz-Institut fur Oberflachenmodifizierung eV Chemistry GERMANY
| | - Bernd Abel
- Leibniz Institute for Surface Modification: Leibniz-Institut fur Oberflachenmodifizierung eV Chemistry GERMANY
| | - Thomas Heine
- TU Dresden: Technische Universitat Dresden Theoretische Chemie GERMANY
| | - Knut R Asmis
- Universitat Leipzig Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie Linnéstr. 2 04103 Leipzig GERMANY
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33
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Ma X, Rohdenburg M, Knorke H, Kawa S, Liu JKY, Aprà E, Asmis KR, Azov VA, Laskin J, Jenne C, Kenttamaa HI, Warneke J. Binding of Saturated and Unsaturated C6-Hydrocarbons to the Electrophilic Anion [B12Br11]−: A Systematic Mechanistic Study. Phys Chem Chem Phys 2022; 24:21759-21772. [DOI: 10.1039/d2cp01042a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The highly reactive gaseous ion [B12Br11]– is a metal-free closed-shell anion which spontaneously forms covalent bonds with hydrocarbon molecules, including alkanes. Herein, we systematically investigate the reaction mechanism for binding...
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34
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Dahlmann F, Lochmann C, Marimuthu AN, Lara-Moreno M, Stoecklin T, Halvick P, Raoult M, Dulieu O, Wild R, Schlemmer S, Brünken S, Wester R. Strong ortho/para effects in the vibrational spectrum of Cl -(H 2). J Chem Phys 2021; 155:241101. [PMID: 34972371 DOI: 10.1063/5.0073749] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023] Open
Abstract
The predissociation spectrum of the Cl-35(H2) complex is measured between 450 and 800 cm-1 in a multipole radiofrequency ion trap at different temperatures using the FELIX infrared free electron laser. Above a certain temperature, the removal of the Cl-(p-H2) para nuclear spin isomer by ligand exchange to the Cl-(o-H2) ortho isomer is suppressed effectively, thereby making it possible to detect the spectrum of this more weakly bound complex. At trap temperatures of 30.5 and 41.5 K, we detect two vibrational bands of Cl-(p-H2) at 510(1) and 606(1) cm-1. Using accurate quantum calculations, these bands are assigned to transitions to the inter-monomer vibrational modes (v1,v2 l2 ) = (0, 20) and (1, 20), respectively.
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Affiliation(s)
- Franziska Dahlmann
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstraße 25, 6020 Innsbruck, Austria
| | - Christine Lochmann
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstraße 25, 6020 Innsbruck, Austria
| | - Aravindh N Marimuthu
- FELIX Laboratory, Institute for Molecules and Materials, Radboud University, Toernooiveld 7, 6525 ED Nijmegen, The Netherlands
| | | | | | - Philippe Halvick
- Université de Bordeaux, ISM, CNSR UMR 5255, 33405 Talence, France
| | - Maurice Raoult
- Université Paris-Saclay, CNRS, Laboratoire Aimé Cotton, 91405 Orsay, France
| | - Olivier Dulieu
- Université Paris-Saclay, CNRS, Laboratoire Aimé Cotton, 91405 Orsay, France
| | - Robert Wild
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstraße 25, 6020 Innsbruck, Austria
| | - Stephan Schlemmer
- I. Physikalisches Institut, Universität zu Köln, Zülpicher Str. 77, 50937 Köln, Germany
| | - Sandra Brünken
- FELIX Laboratory, Institute for Molecules and Materials, Radboud University, Toernooiveld 7, 6525 ED Nijmegen, The Netherlands
| | - Roland Wester
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstraße 25, 6020 Innsbruck, Austria
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35
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Davies JA, Yang S, Ellis AM. Infrared spectra of carbocations and CH 4+ in helium. Phys Chem Chem Phys 2021; 23:27449-27459. [PMID: 34870649 DOI: 10.1039/d1cp03138d] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Infrared (IR) spectra of several hydrocarbon cations are reported, namely CH3+, CH4+, CH5+, CH5+(CH4) and C2H5+. The spectra were generated from weakly-bound helium-cation complexes formed by electron ionization of helium nanodroplets doped with a neutral hydrocarbon precursor. Spectroscopic transitions were registered by photoexcitation of the complexes coupled with mass spectrometric detection of the bare ions. For CH3+, we provide evidence showing that the helium-bound complexes contain 10-20 helium atoms (on average) and have a rotational temperature of ∼5 K. We show that this technique is well-suited to the study of highly symmetric or fluxional ionic species, as these intrinsic properties are preserved in the helium environment. This is in contrast to conventional tagging methods that use a single atom or molecule, which can change the point group or rigidity of the core ion and therefore the spectral profile. We demonstrate this for the highly fluxional molecular ion CH5+, whose spectrum in the current study matches that of the gas phase ion, whereas the fluxionality is lost when a methane tag is added. Finally, we present the first IR spectrum of methane cation, CH4+. The spectrum of this fundamental organic ion shows CH stretching bands consistent with a non-tetrahedral structure, a consequence of Jahn-Teller distortion.
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Affiliation(s)
- Julia A Davies
- Department of Chemistry, University of Leicester, University Road, Leicester, LE1 7RH, UK.
| | - Shengfu Yang
- Department of Chemistry, University of Leicester, University Road, Leicester, LE1 7RH, UK.
| | - Andrew M Ellis
- Department of Chemistry, University of Leicester, University Road, Leicester, LE1 7RH, UK.
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36
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Asvany O, Schlemmer S. Rotational action spectroscopy of trapped molecular ions. Phys Chem Chem Phys 2021; 23:26602-26622. [PMID: 34817492 DOI: 10.1039/d1cp03975j] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Rotational action spectroscopy is an experimental method in which rotational spectra of molecules, typically in the microwave to sub-mm-wave domain of the electromagnetic spectrum (∼1-1000 GHz), are recorded by action spectroscopy. Action spectroscopy means that the spectrum is recorded not by detecting the absorption of light by the molecules, but by the action of the light on the molecules, e.g., photon-induced dissociation of a chemical bond, a photon-triggered reaction, or photodetachment of an electron. Typically, such experiments are performed on molecular ions, which can be well controlled and mass-selected by guiding and storage techniques. Though coming with many advantages, the application of action schemes to rotational spectroscopy was hampered for a long time by the small energy content of a corresponding photon. Therefore, the first rotational action spectroscopic methods emerged only about one decade ago. Today, there exists a toolbox full of different rotational action spectroscopic schemes which are summarized in this review.
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Affiliation(s)
- Oskar Asvany
- I. Physikalisches Institut, Universität zu Köln, Zülpicher Str. 77, 50937 Köln, Germany.
| | - Stephan Schlemmer
- I. Physikalisches Institut, Universität zu Köln, Zülpicher Str. 77, 50937 Köln, Germany.
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37
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Chen L, Dean JLS, Fournier JA. Time-Domain Vibrational Action Spectroscopy of Cryogenically Cooled, Messenger-Tagged Ions Using Ultrafast IR Pulses. J Phys Chem A 2021; 125:10235-10244. [PMID: 34788043 DOI: 10.1021/acs.jpca.1c01996] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Herein, we present the initial steps toward developing a framework that will enable the characterization of photoinitiated dynamics within large molecular ions in the gas phase with temporal and energy resolution. We combine the established techniques of tag-loss action spectroscopy on cryogenically trapped molecular ions with ultrafast vibrational spectroscopy by measuring the linear action spectrum of N2-tagged protonated diglycine (GlyGlyH+·N2) with an ultrafast infrared (IR) pulse pair. The presented time-domain data demonstrate that the excited-state vibrational populations in the tagged parent ions are modulated by the ultrafast IR pulse pair and encoded through the messenger tag-loss action response. The Fourier transform of the time-domain action interferograms yields the linear frequency-domain vibrational spectrum of the ion ensemble, and we show that this spectrum matches the linear spectrum collected in a traditional manner using a frequency-resolved IR laser. Time- and frequency-domain interpretations of the data are considered and discussed. Finally, we demonstrate the acquisition of nonlinear signals through cross-polarization pump-probe experiments. These results validate the prerequisite first steps of combining tag-loss action spectroscopy with two-dimensional IR spectroscopy for probing dynamics in gas-phase molecular ions.
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Affiliation(s)
- Liangyi Chen
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130 United States
| | - Jessika L S Dean
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130 United States
| | - Joseph A Fournier
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130 United States
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38
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McNary CP, Demireva M, Martens J, Berden G, Oomens J, Hamlow LA, Rodgers MT, Armentrout PB. Infrared multiple photon dissociation action spectroscopy of protonated unsymmetrical dimethylhydrazine and proton-bound dimers of hydrazine and unsymmetrical dimethylhydrazine. Phys Chem Chem Phys 2021; 23:25877-25885. [PMID: 34766618 DOI: 10.1039/d1cp03781a] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Abstract
The gas-phase structures of protonated unsymmetrical 1,1-dimethylhydrazine (UDMH) and the proton-bound dimers of UDMH and hydrazine are examined by infrared multiple photon dissociation (IRMPD) action spectroscopy utilizing light generated by a free electron laser and an optical parametric oscillator laser system. To identify the structures present in the experimental studies, the measured IRMPD spectra are compared to spectra calculated at the B3LYP-GD3BJ/6-311+G(d,p) level of theory. These comparisons show that protonated UDMH binds the proton at the methylated nitrogen atom (α) with two low-lying α conformers probably being populated. For (UDMH)2H+, the proton is shared between the methylated nitrogen atoms with several low-lying α conformers likely to be populated. Higher-lying conformers of (UDMH)2H+ in which the proton is shared between α and β (unmethylated) nitrogen atoms cannot be ruled out on the basis of the IRPMD spectrum. For (N2H4)2H+, there are four low-lying conformers that all reproduce the IRMPD spectrum reasonably well. As hydrazine and UDMH see usage as fuels for rocket engines, such spectra are potentially useful as a means of remotely monitoring rocket launches, especially in cases of unsuccessful launches where environmental hazards need to be assessed.
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Affiliation(s)
| | - Maria Demireva
- Department of Chemistry, University of Utah, Salt Lake City, UT 84112, USA.
| | - Jonathan Martens
- Radboud University, Institute for Molecules and Materials, FELIX Laboratory, Toernooiveld 7, 6525ED Nijmegen, The Netherlands
| | - Giel Berden
- Radboud University, Institute for Molecules and Materials, FELIX Laboratory, Toernooiveld 7, 6525ED Nijmegen, The Netherlands
| | - Jos Oomens
- Radboud University, Institute for Molecules and Materials, FELIX Laboratory, Toernooiveld 7, 6525ED Nijmegen, The Netherlands.,Van't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098XH Amsterdam, The Netherlands
| | - L A Hamlow
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, USA
| | - M T Rodgers
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, USA
| | - P B Armentrout
- Department of Chemistry, University of Utah, Salt Lake City, UT 84112, USA.
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39
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Müller F, Sauer J, Song X, Asmis KR. The Chemical Nature of Ti 4O 10-: Vibrational Predissociation Spectroscopy Combined with Global Structure Optimization. J Phys Chem A 2021; 125:9571-9577. [PMID: 34709822 DOI: 10.1021/acs.jpca.1c05552] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The gas-phase infrared spectrum of Ti4O10- is studied in the spectral range from 400 cm-1 to 1250 cm-1 using cryogenic ion trap vibrational spectroscopy, in combination with density functional theory (DFT). The infrared photodissociation (IRPD) spectrum of D2-tagged Ti4O10- provides evidence for a structure of lower symmetry that contains a superoxo group (1121 cm-1) and two terminal Ti=O moieties. DFT combined with a genetic algorithm for global structure optimization predicts two isomers which feature a superoxo group: the Cs symmetric global minimum-energy structure and a similar isomer (C1) that is slightly higher in energy. Coupled cluster calculations confirm the relative stability. Comparison of the harmonic DFT spectra (different functionals) with the IRPD spectrum suggests that both of these isomers contribute. Earlier assignments to the adamantane-like C3v isomer with three terminal Ti-O• - groups in a quartet state are not confirmed. They were based on the infrared multiple photon photodissociation (IRMPD) spectrum of bare Ti4O10- and local DFT structure optimizations.
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Affiliation(s)
- Fabian Müller
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstr. 2, 04103 Leipzig, Germany.,Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Joachim Sauer
- Institut für Chemie, Humboldt-Universität zu Berlin, Unter den Linden 6, 10099 Berlin, Germany
| | - Xiaowei Song
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Knut R Asmis
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstr. 2, 04103 Leipzig, Germany
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40
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Gaigeot MP. Some opinions on MD-based vibrational spectroscopy of gas phase molecules and their assembly: An overview of what has been achieved and where to go. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2021; 260:119864. [PMID: 34052762 DOI: 10.1016/j.saa.2021.119864] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2021] [Revised: 04/13/2021] [Accepted: 04/18/2021] [Indexed: 06/12/2023]
Abstract
We hereby review molecular dynamics simulations for anharmonic gas phase spectroscopy and provide some of our opinions of where the field is heading. With these new directions, the theoretical IR/Raman spectroscopy of large (bio)-molecular systems will be more easily achievable over longer time-scale MD trajectories for an increase in accuracy of the MD-IR and MD-Raman calculated spectra. With the new directions presented here, the high throughput 'decoding' of experimental IR/Raman spectra into 3D-structures should thus be possible, hence advancing e.g. the field of MS-IR for structural characterization by spectroscopy. We also review the assignment of vibrational spectra in terms of anharmonic molecular modes from the MD trajectories, and especially introduce our recent developments based on Graph Theory algorithms. Graph Theory algorithmic is also introduced in this review for the identification of the molecular 3D-structures sampled over MD trajectories.
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Affiliation(s)
- Marie-Pierre Gaigeot
- Université Paris-Saclay, Univ Evry, CNRS, LAMBE UMR8587, 91025 Evry-Courcouronnes, France.
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41
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Li YK, Babin MC, Debnath S, Iwasa T, Kumar S, Taketsugu T, Asmis KR, Lyalin A, Neumark DM. Structural Characterization of Nickel-Doped Aluminum Oxide Cations by Cryogenic Ion Trap Vibrational Spectroscopy. J Phys Chem A 2021; 125:9527-9535. [PMID: 34693712 DOI: 10.1021/acs.jpca.1c07156] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Isolated nickel-doped aluminum oxide cations (NiOm)(Al2O3)n(AlO)+ with m = 1-2 and n = 1-3 are investigated by infrared photodissociation (IRPD) spectroscopy in combination with density functional theory and the single-component artificial force-induced reaction method. IRPD spectra of the corresponding He-tagged cations are reported in the 400-1200 cm-1 spectral range and assigned based on a comparison to calculated harmonic IR spectra of low-energy isomers. Simulated spectra of the lowest energy structures generally match the experimental spectra, but multiple isomers may contribute to the spectra of the m = 2 series. The identified structures of the oxides (m = 1) correspond to inserting a Ni-O moiety into an Al-O bond of the corresponding (Al2O3)1-3(AlO)+ cluster, yielding either a doubly or triply coordinated Ni2+ center. The m = 2 clusters prefer similar structures in which the additional O atom either is incorporated into a peroxide unit, leaving the oxidation state of the Ni2+ atom unchanged, or forms a biradical comprising a terminal oxygen radical anion Al-O•- and a Ni3+ species. These clusters represent model systems for under-coordinated Ni sites in alumina-supported Ni catalysts and should prove helpful in disentangling the mechanism of selective oxidative dehydrogenation of alkanes by Ni-doped catalysts.
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Affiliation(s)
- Ya-Ke Li
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstrasse 2, 04103 Leipzig, Germany.,Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Mark C Babin
- Department of Chemistry, University of California, Berkeley, California 94720, United States
| | - Sreekanta Debnath
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstrasse 2, 04103 Leipzig, Germany.,Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Takeshi Iwasa
- Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan
| | - Sonu Kumar
- Institute for Chemical Reaction Design and Discovery (WPI-ICReDD), Hokkaido University, Sapporo 001-0021, Japan
| | - Tetsuya Taketsugu
- Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan.,Institute for Chemical Reaction Design and Discovery (WPI-ICReDD), Hokkaido University, Sapporo 001-0021, Japan
| | - Knut R Asmis
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstrasse 2, 04103 Leipzig, Germany
| | - Andrey Lyalin
- Institute for Chemical Reaction Design and Discovery (WPI-ICReDD), Hokkaido University, Sapporo 001-0021, Japan.,Center for Green Research on Energy and Environmental Materials, National Institute for Material Science (NIMS), Tsukuba 305-0044, Japan
| | - Daniel M Neumark
- Department of Chemistry, University of California, Berkeley, California 94720, United States.,Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
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42
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Niedner‐Schatteburg G, Kappes MM. Advancing Inorganic Coordination Chemistry by Spectroscopy of Isolated Molecules: Methods and Applications. Chemistry 2021; 27:15027-15042. [PMID: 34636096 PMCID: PMC8596414 DOI: 10.1002/chem.202102815] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2021] [Indexed: 12/14/2022]
Abstract
A unique feature of the work carried out in the Collaborative Research Center 3MET continues to be its emphasis on innovative, advanced experimental methods which hyphenate mass-selection with further analytical tools such as laser spectroscopy for the study of isolated molecular ions. This allows to probe the intrinsic properties of the species of interest free of perturbing solvent or matrix effects. This review explains these methods and uses examples from past and ongoing 3MET studies of specific classes of multicenter metal complexes to illustrate how coordination chemistry can be advanced by applying them. As a corollary, we will show how the challenges involved in providing well-defined, for example monoisomeric, samples of the molecular ions have helped to further improve the methods themselves thus also making them applicable to many other areas of chemistry.
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Affiliation(s)
| | - Manfred M. Kappes
- Institute of Physical Chemistry and Institute of NanotechnologyKarlsruhe Institute of Technology (KIT)76128KarlsruheGermany
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43
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Thomas DA, Taccone M, Ober K, Mucha E, Meijer G, von Helden G. Helium Nanodroplet Infrared Action Spectroscopy of the Proton-Bound Dimer of Hydrogen Sulfate and Formate: Examining Nuclear Quantum Effects. J Phys Chem A 2021; 125:9279-9287. [PMID: 34652165 PMCID: PMC8558860 DOI: 10.1021/acs.jpca.1c05705] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
The proton-bound dimer of hydrogen sulfate and formate is an archetypal structure for ionic hydrogen-bonding complexes that contribute to biogenic aerosol nucleation. Of central importance for the structure and properties of this complex is the location of the bridging proton connecting the two conjugate base moieties. The potential energy surface for bridging proton translocation features two local minima, with the proton localized at either the formate or hydrogen sulfate moiety. However, electronic structure methods reveal a shallow potential energy surface governing proton translocation, with a barrier on the order of the zero-point energy. This shallow potential complicates structural assignment and necessitates a consideration of nuclear quantum effects. In this work, we probe the structure of this complex and its isotopologues, utilizing infrared (IR) action spectroscopy of ions captured in helium nanodroplets. The IR spectra indicate a structure in which a proton is shared between the hydrogen sulfate and formate moieties, HSO4-···H+···-OOCH. However, because of the nuclear quantum effects and vibrational anharmonicities associated with the shallow potential for proton translocation, the extent of proton displacement from the formate moiety remains unclear, requiring further experiments or more advanced theoretical treatments for additional insight.
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Affiliation(s)
- Daniel A Thomas
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Martín Taccone
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Katja Ober
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Eike Mucha
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Gerard Meijer
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Gert von Helden
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
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44
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Chen L, Fournier JA. Probing Hydrogen-Bonding Interactions within Phenol-Benzimidazole Proton-Coupled Electron Transfer Model Complexes with Cryogenic Ion Vibrational Spectroscopy. J Phys Chem A 2021; 125:9288-9297. [PMID: 34652915 DOI: 10.1021/acs.jpca.1c05879] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Hydrogen-bonding interactions within a series of phenol-benzimidazole model proton-coupled electron transfer (PCET) dyad complexes are characterized using cryogenic ion vibrational spectroscopy. A highly red-shifted and surprisingly broad (>1000 cm-1) transition is observed in one of the models and assigned to the phenolic OH stretch strongly H-bonded to the N(3) benzimidazole atom. The breadth is attributed to a combination of anharmonic Fermi-resonance coupling between the OH stretch and background doorway states involving OH bending modes and strong coupling of the OH stretch frequency to structural deformations along the proton-transfer coordinate accessible at the vibrational zero-point level. The other models show unexpected protonation of the benzimidazole group upon electrospray ionization instead of at more basic remote amine/amide groups. This leads to the formation of HO-+HN(3) H-bond motifs that are much weaker than the OH-N(3) H-bond arrangement. H-bonding between the N(1)H+ benzimidazole group and the carbonyl on the tyrosine backbone is the stronger and preferred interaction in these complexes. The results show that conjugation effects, secondary H-bond interactions, and H-bond soft modes strongly influence the OH-N(3) interaction and highlight the importance of the direct monitoring of proton stretch transitions in characterizing the proton-transfer reaction coordinate in PCET systems.
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Affiliation(s)
- Liangyi Chen
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, United States
| | - Joseph A Fournier
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, United States
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45
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Paciotti R, Corinti D, Maitre P, Coletti C, Re N, Chiavarino B, Crestoni ME, Fornarini S. From Preassociation to Chelation: A Survey of Cisplatin Interaction with Methionine at Molecular Level by IR Ion Spectroscopy and Computations. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2021; 32:2206-2217. [PMID: 34236851 PMCID: PMC8397306 DOI: 10.1021/jasms.1c00152] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/03/2021] [Revised: 06/23/2021] [Accepted: 06/23/2021] [Indexed: 06/13/2023]
Abstract
Methionine (Met) plays an important role in the metabolism of cisplatin anticancer drug. Yet, methionine platination in aqueous solution presents a highly complex pattern of interconnected paths and intermediates. This study reports on the reaction of methionine with the active aqua form of cisplatin, cis-[PtCl(NH3)2(H2O)]+, isolating the encounter complex of the reactant pair, {cis-[PtCl(NH3)2(H2O)]+·Met}, by electrospray ionization. In the unsolvated state, charged intermediates are characterized for their structure and photofragmentation behavior by IR ion spectroscopy combined with quantum-chemical calculations, obtaining an outline of the cisplatin-methionine reaction at a molecular level. To summarize the major findings: (i) the {cis-[PtCl(NH3)2(H2O)]+·Met} encounter complex, lying on the reaction coordinate of the Eigen-Wilkins preassociation mechanism for ligand substitution, is delivered in the gas phase and characterized by IR ion spectroscopy; (ii) upon vibrational excitation, ligand exchange occurs within {cis-[PtCl(NH3)2(H2O)]+·Met}, releasing water and cis-[PtCl(NH3)2(Met)]+, along the calculated energy profile; (iii) activated cis-[PtCl(NH3)2(Met)]+ ions undergo NH3 departure, forming a chelate complex, [PtCl(NH3)(Met)]+, whose structure is congruent with overwhelming S-Met ligation as the primary coordination step. The latter process involving ammonia loss marks a difference with the prevailing chloride replacement in protic solvent, pointing to the effect of a low-polarity environment.
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Affiliation(s)
- Roberto Paciotti
- Dipartimento
di Farmacia, Università G. D’Annunzio
Chieti-Pescara, Via dei
Vestini 31, Chieti I-66100, Italy
| | - Davide Corinti
- Dipartimento
di Chimica e Tecnologie del Farmaco, Università
di Roma “La Sapienza”, I-00185 Roma, Italy
| | - Philippe Maitre
- Institut
de Chimie Physique, Université Paris-Saclay,
CNRS, F-91405 Orsay, France
| | - Cecilia Coletti
- Dipartimento
di Farmacia, Università G. D’Annunzio
Chieti-Pescara, Via dei
Vestini 31, Chieti I-66100, Italy
| | - Nazzareno Re
- Dipartimento
di Farmacia, Università G. D’Annunzio
Chieti-Pescara, Via dei
Vestini 31, Chieti I-66100, Italy
| | - Barbara Chiavarino
- Dipartimento
di Chimica e Tecnologie del Farmaco, Università
di Roma “La Sapienza”, I-00185 Roma, Italy
| | - Maria Elisa Crestoni
- Dipartimento
di Chimica e Tecnologie del Farmaco, Università
di Roma “La Sapienza”, I-00185 Roma, Italy
| | - Simonetta Fornarini
- Dipartimento
di Chimica e Tecnologie del Farmaco, Università
di Roma “La Sapienza”, I-00185 Roma, Italy
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46
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Heller J, Tang WK, Cunningham EM, Demissie EG, van der Linde C, Lam WK, Ončák M, Siu C, Beyer MK. Auf zur Wasserstoffentwicklung: Das Infrarot-Spektrum von hydratisiertem Aluminiumhydrid-Hydroxid HAlOH +(H 2O) n-1, n=9-14. ANGEWANDTE CHEMIE (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2021; 133:16994-16999. [PMID: 38505657 PMCID: PMC10947318 DOI: 10.1002/ange.202105166] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/15/2021] [Indexed: 03/21/2024]
Abstract
AbstractHydratisierte Al+‐Ionen eliminieren H2 in einem Bereich von 11 bis 24 Wassermolekülen. Wir untersuchten die Struktur von HAlOH+(H2O)n−1, n=9–14, durch IR‐Mehrfachphotonendissoziationsspektroskopie bei 1400–2250 cm−1. Aufgrund quantenchemischer Rechnungen ordnen wir die Merkmale bei 1940 und 1850 cm−1 der Al‐H‐Streckschwingung in fünf‐ bzw. sechsfach koordinierten AlIII‐Komplexen zu. Es werden Wasserstoffbrücken in Richtung des Hydrids beobachtet, beginnend bei n=12. Die Frequenz der Al‐H‐Streckschwingung ist sehr empfindlich gegenüber der Struktur des Netzwerks aus Wasserstoffbrücken, und die große Anzahl von Isomeren führt zu einer deutlichen Verbreiterung und Rotverschiebung der Absorptionen der wasserstoffbrückengebundenen Al‐H‐Streckschwingung. Das Hydrid kann sogar als doppelter Wasserstoffbrücken‐Akzeptor wirken und die Al‐H‐Streckschwingung zu Frequenzen verschieben, die unter denen der Wasser‐Biegemoden liegen. Das Einsetzen der Wasserstoffbrückenbindung und das Verschwinden der freien Al‐H‐Streckschwingung fallen mit dem Einsetzen der Wasserstoffentwicklung zusammen.
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Affiliation(s)
- Jakob Heller
- Institut für Ionenphysik und Angewandte PhysikUniversität InnsbruckTechnikerstraße 256020InnsbruckÖsterreich
| | - Wai Kit Tang
- Department of ChemistryCity University of Hong Kong83 Tat Chee AvenueKowloon TongHong Kong SARP. R. China
| | - Ethan M. Cunningham
- Institut für Ionenphysik und Angewandte PhysikUniversität InnsbruckTechnikerstraße 256020InnsbruckÖsterreich
| | - Ephrem G. Demissie
- Department of ChemistryCity University of Hong Kong83 Tat Chee AvenueKowloon TongHong Kong SARP. R. China
| | - Christian van der Linde
- Institut für Ionenphysik und Angewandte PhysikUniversität InnsbruckTechnikerstraße 256020InnsbruckÖsterreich
| | - Wing Ka Lam
- Department of ChemistryCity University of Hong Kong83 Tat Chee AvenueKowloon TongHong Kong SARP. R. China
| | - Milan Ončák
- Institut für Ionenphysik und Angewandte PhysikUniversität InnsbruckTechnikerstraße 256020InnsbruckÖsterreich
| | - Chi‐Kit Siu
- Department of ChemistryCity University of Hong Kong83 Tat Chee AvenueKowloon TongHong Kong SARP. R. China
| | - Martin K. Beyer
- Institut für Ionenphysik und Angewandte PhysikUniversität InnsbruckTechnikerstraße 256020InnsbruckÖsterreich
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47
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Heller J, Tang WK, Cunningham EM, Demissie EG, van der Linde C, Lam WK, Ončák M, Siu C, Beyer MK. Getting Ready for the Hydrogen Evolution Reaction: The Infrared Spectrum of Hydrated Aluminum Hydride-Hydroxide HAlOH + (H 2 O) n-1 , n=9-14. Angew Chem Int Ed Engl 2021; 60:16858-16863. [PMID: 34008243 PMCID: PMC8361745 DOI: 10.1002/anie.202105166] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2021] [Indexed: 12/20/2022]
Abstract
Hydrated singly charged aluminum ions eliminate molecular hydrogen in a size regime from 11 to 24 water molecules. Here we probe the structure of HAlOH+ (H2 O)n-1 , n=9-14, by infrared multiple photon spectroscopy in the region of 1400-2250 cm-1 . Based on quantum chemical calculations, we assign the features at 1940 cm-1 and 1850 cm-1 to the Al-H stretch in five- and six-coordinate aluminum(III) complexes, respectively. Hydrogen bonding towards the hydride is observed, starting at n=12. The frequency of the Al-H stretch is very sensitive to the structure of the hydrogen bonding network, and the large number of isomers leads to significant broadening and red-shifting of the absorption of the hydrogen-bonded Al-H stretch. The hydride can even act as a double hydrogen bond acceptor, shifting the Al-H stretch to frequencies below those of the water bending mode. The onset of hydrogen bonding and disappearance of the free Al-H stretch coincides with the onset of hydrogen evolution.
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Affiliation(s)
- Jakob Heller
- Institut für Ionenphysik und Angewandte PhysikUniversität InnsbruckTechnikerstrasse 256020InnsbruckAustria
| | - Wai Kit Tang
- Department of ChemistryCity University of Hong Kong83 Tat Chee AvenueKowloon TongHong Kong SARP.R. China
| | - Ethan M. Cunningham
- Institut für Ionenphysik und Angewandte PhysikUniversität InnsbruckTechnikerstrasse 256020InnsbruckAustria
| | - Ephrem G. Demissie
- Department of ChemistryCity University of Hong Kong83 Tat Chee AvenueKowloon TongHong Kong SARP.R. China
| | - Christian van der Linde
- Institut für Ionenphysik und Angewandte PhysikUniversität InnsbruckTechnikerstrasse 256020InnsbruckAustria
| | - Wing Ka Lam
- Department of ChemistryCity University of Hong Kong83 Tat Chee AvenueKowloon TongHong Kong SARP.R. China
| | - Milan Ončák
- Institut für Ionenphysik und Angewandte PhysikUniversität InnsbruckTechnikerstrasse 256020InnsbruckAustria
| | - Chi‐Kit Siu
- Department of ChemistryCity University of Hong Kong83 Tat Chee AvenueKowloon TongHong Kong SARP.R. China
| | - Martin K. Beyer
- Institut für Ionenphysik und Angewandte PhysikUniversität InnsbruckTechnikerstrasse 256020InnsbruckAustria
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48
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Mayer M, Rohdenburg M, Kawa S, Horn F, Knorke H, Jenne C, Tonner R, Asmis KR, Warneke J. Relevance of π-Backbonding for the Reactivity of Electrophilic Anions [B 12 X 11 ] - (X=F, Cl, Br, I, CN). Chemistry 2021; 27:10274-10281. [PMID: 34014012 PMCID: PMC8362024 DOI: 10.1002/chem.202100949] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2021] [Indexed: 11/08/2022]
Abstract
Electrophilic anions of type [B12 X11 ]- posses a vacant positive boron binding site within the anion. In a comparatitve experimental and theoretical study, the reactivity of [B12 X11 ]- with X=F, Cl, Br, I, CN is characterized towards different nucleophiles: (i) noble gases (NGs) as σ-donors and (ii) CO/N2 as σ-donor-π-acceptors. Temperature-dependent formation of [B12 X11 NG]- indicates the enthalpy order (X=CN)>(X=Cl)≈(X=Br)>(X=I)≈(X=F) almost independent of the NG in good agreement with calculated trends. The observed order is explained by an interplay of the electron deficiency of the vacant boron site in [B12 X11 ]- and steric effects. The binding of CO and N2 to [B12 X11 ]- is significantly stronger. The B3LYP 0 K attachment enthapies follow the order (X=F)>(X=CN)>(X=Cl)>(X=Br)>(X=I), in contrast to the NG series. The bonding motifs of [B12 X11 CO]- and [B12 X11 N2 ]- were characterized using cryogenic ion trap vibrational spectroscopy by focusing on the CO and N2 stretching frequencies ν C O and ν N 2 , respectively. Observed shifts of ν C O and ν N 2 are explained by an interplay between electrostatic effects (blue shift), due to the positive partial charge, and by π-backdonation (red shift). Energy decomposition analysis and analysis of natural orbitals for chemical valence support all conclusions based on the experimental results. This establishes a rational understanding of [B12 X11 ]- reactivety dependent on the substituent X and provides first systematic data on π-backdonation from delocalized σ-electron systems of closo-borate anions.
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Affiliation(s)
- Martin Mayer
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstraße 2, 04103, Leipzig, Germany
| | - Markus Rohdenburg
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstraße 2, 04103, Leipzig, Germany.,Institut für Angewandte und Physikalische Chemie, Universität Bremen, Leobener Str. 5, 28359, Bremen, Germany
| | - Sebastian Kawa
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstraße 2, 04103, Leipzig, Germany
| | - Francine Horn
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstraße 2, 04103, Leipzig, Germany
| | - Harald Knorke
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstraße 2, 04103, Leipzig, Germany
| | - Carsten Jenne
- Anorganische Chemie Fakultät für Mathematik und Naturwissenschaften, Bergische Universität Wuppertal, Gaußstr. 20, 42119, Wuppertal, Germany
| | - Ralf Tonner
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstraße 2, 04103, Leipzig, Germany
| | - Knut R Asmis
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstraße 2, 04103, Leipzig, Germany
| | - Jonas Warneke
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstraße 2, 04103, Leipzig, Germany.,Leibniz Institute of Surface Engineering (IOM), Sensoric Surfaces and Functional Interfaces, Permoserstraße 15, 04318, Leipzig, Germany
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49
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Chakraborty A, Schmahl S, Asmis KR. Isomer-Specific Vibrational Spectroscopy of Microhydrated Lithium Dichloride Anions: Spectral Fingerprint of Solvent-Shared Ion Pairs. Chemphyschem 2021; 22:1036-1041. [PMID: 33783947 PMCID: PMC8252531 DOI: 10.1002/cphc.202100170] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2021] [Revised: 03/28/2021] [Indexed: 12/21/2022]
Abstract
The vibrational spectroscopy of lithium dichloride anions microhydrated with one to three water molecules, [LiCl2 (H2 O)1-3 ]- , is studied in the OH stretching region (3800-2800 cm-1 ) using isomer-specific IR/IR double-resonance population labelling experiments. The spectroscopic fingerprints of individual isomers can only be unambiguously assigned after anharmonic effects are considered, but then yield molecular level insight into the onset of salt dissolution in these gas phase model systems. Based on the extent of the observed frequency shifts ΔνOH of the hydrogen-bonded OH stretching oscillators solvent-shared ion pair motifs (<3200 cm-1 ) can be distinguished from intact-core structures (>3200 cm-1 ). The characteristic fingerprint of a water molecule trapped directly in-between two ions of opposite charge provides an alternative route to evaluate the extent of ion pairing in aqueous electrolyte solutions.
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Affiliation(s)
- Arghya Chakraborty
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstrasse 2, D-04103, Leipzig, Germany
| | - Sonja Schmahl
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstrasse 2, D-04103, Leipzig, Germany
| | - Knut R Asmis
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie, Universität Leipzig, Linnéstrasse 2, D-04103, Leipzig, Germany
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50
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Mason JL, Folluo CN, Jarrold CC. More than little fragments of matter: Electronic and molecular structures of clusters. J Chem Phys 2021; 154:200901. [DOI: 10.1063/5.0054222] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Jarrett L. Mason
- Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, USA
| | - Carley N. Folluo
- Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, USA
| | - Caroline Chick Jarrold
- Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, USA
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