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Prajapati M, Aryal M, Li Y, Zhang Z, Acharya MP, Clive S, Frossard JP. Molecular characterization of porcine reproductive and respiratory syndrome virus identified in 2021 from Nepal. Front Vet Sci 2024; 11:1267571. [PMID: 38628941 PMCID: PMC11018977 DOI: 10.3389/fvets.2024.1267571] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2023] [Accepted: 02/21/2024] [Indexed: 04/19/2024] Open
Abstract
Porcine reproductive and respiratory syndrome (PRRS), an important viral disease of swine caused by PRRS virus (PRRSV) was first confirmed in Nepal in 2013. Since then, the virus has spread throughout the country and has now become endemic affecting the pig production nationally. However, molecular characterization of circulating strains has not been done in Nepal yet. In the present study, serum samples were collected from outbreak areas of different districts of Nepal and samples positive for PRRSV by ELISA were sent to Animal and Plant Health Agency (APHA), United Kingdom for sequence analysis. Out of 35 samples that were sent to APHA, only one sample was found positive by PCR and subjected to sequence analysis based on ORF5, ORF7 and Nsp2. The results from the phylogenetic analysis demonstrated that the PRRSV strain belongs to PRRSV-2 and lineage 8 strain. The sequences from the Nepalese PRRSV strain revealed a high degree of similarity with the strains isolated from India, China and Vietnam, with the closest genetic relatedness to the Indian isolates from 2020 and 2018. This is the first study on molecular characterization of PRRS virus circulating in Nepal. Further studies on strains circulating in Nepal are very essential to understand the virus diversity, its spread and evolution.
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Affiliation(s)
- Meera Prajapati
- National Animal Health Research Centre, Nepal Agricultural Research Council, Lalitpur, Nepal
| | - Manita Aryal
- Central Department of Microbiology, Tribhuvan University, Kathmandu, Nepal
| | - Yanmin Li
- College of Animal Husbandry and Veterinary Medicine, Southwest Minzu University, Chengdu, China
| | - Zhidong Zhang
- College of Animal Husbandry and Veterinary Medicine, Southwest Minzu University, Chengdu, China
| | - Madhav Prasad Acharya
- National Animal Health Research Centre, Nepal Agricultural Research Council, Lalitpur, Nepal
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Hiremath J, Hemadri D, Nayakvadi S, Kumar C, Gowda CSS, Sharma D, Ramamoorthy R, Mamatha SS, Patil S, Ranjini RA, Jayamohanan TV, Swapna SA, Gulati BR. Epidemiological investigation of ASF outbreaks in Kerala (India): detection, source tracing and economic implications. Vet Res Commun 2024; 48:827-837. [PMID: 37955753 DOI: 10.1007/s11259-023-10254-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2023] [Accepted: 11/02/2023] [Indexed: 11/14/2023]
Abstract
This study investigates suspected African swine fever (ASF) outbreaks in two villages of Kannur district in Kerala, India, with the aim of identifying the causative agent and its genotype, the source of infection, and estimating the economic losses due to the outbreaks. Clinically, the disease was acute with high mortality, while gross pathology was characterized by widespread haemorrhages in various organs, especially the spleen, which was dark, enlarged and had friable cut surfaces with diffuse haemorrhages. Notably, histopathological examination revealed multifocal, diffuse haemorrhages in the splenic parenchyma and lymphoid depletion accompanied by lymphoid cell necrosis. The clinico-pathological observations were suggestive of ASF, which was confirmed by PCR. The source of outbreak was identified as swill and it was a likely point source infection as revealed by epidemic curve analysis. The phylogenetic analysis of p72 gene identified the ASFV in the current outbreak as genotype-II and IGR II variant consistent with ASFVs detected in India thus far. However, the sequence analysis of the Central Variable Region (CVR) of the B602L gene showed that the ASFVs circulating in Kerala (South India) formed a separate clade along with those found in Mizoram (North East India), while ASFVs circulating in Arunachal Pradesh and Assam states of India grouped in to different clade. This study represents the first investigation of ASF outbreak in South India, establishing the genetic relatedness of the ASFV circulating in this region with that in other parts of the country. The study also underscores the utility of the CVR of the B602L gene in genetically characterizing highly similar Genotype II ASFVs to understand the spread of ASF within the country.
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Affiliation(s)
- Jagadish Hiremath
- ICAR-National Institute of Veterinary Epidemiology and Disease Informatics (NIVEDI), Yelahanka, Bengaluru, Karnataka, India
| | - Divakar Hemadri
- ICAR-National Institute of Veterinary Epidemiology and Disease Informatics (NIVEDI), Yelahanka, Bengaluru, Karnataka, India
| | - Shivasharanappa Nayakvadi
- ICAR-National Institute of Veterinary Epidemiology and Disease Informatics (NIVEDI), Yelahanka, Bengaluru, Karnataka, India
| | - Chethan Kumar
- ICAR-National Institute of Veterinary Epidemiology and Disease Informatics (NIVEDI), Yelahanka, Bengaluru, Karnataka, India
| | | | - Damini Sharma
- ICAR-National Institute of Veterinary Epidemiology and Disease Informatics (NIVEDI), Yelahanka, Bengaluru, Karnataka, India
| | - Rajendran Ramamoorthy
- ICAR-National Institute of Veterinary Epidemiology and Disease Informatics (NIVEDI), Yelahanka, Bengaluru, Karnataka, India
| | - Suresh Shankanahalli Mamatha
- ICAR-National Institute of Veterinary Epidemiology and Disease Informatics (NIVEDI), Yelahanka, Bengaluru, Karnataka, India
| | - Sharanagouda Patil
- ICAR-National Institute of Veterinary Epidemiology and Disease Informatics (NIVEDI), Yelahanka, Bengaluru, Karnataka, India
| | | | | | - Susan Abraham Swapna
- Department of Animal Husbandry, State Institute for Animal Diseases, Palode, Kerala, India
| | - Baldev Raj Gulati
- ICAR-National Institute of Veterinary Epidemiology and Disease Informatics (NIVEDI), Yelahanka, Bengaluru, Karnataka, India.
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Rajkhowa S, Sonowal J, Pegu SR, Sanger GS, Deb R, Das PJ, Doley J, Paul S, Gupta VK. Natural co-infection of pigs with African swine fever virus and porcine reproductive and respiratory syndrome virus in India. Braz J Microbiol 2024; 55:1017-1022. [PMID: 38041718 PMCID: PMC10920511 DOI: 10.1007/s42770-023-01203-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2023] [Accepted: 11/28/2023] [Indexed: 12/03/2023] Open
Abstract
Porcine reproductive and respiratory syndrome (PRRS) and African swine fever (ASF) are economically important diseases of pigs throughout the world. During an outbreak, all age groups of animals except piglets < 1 month of age were affected with symptoms of high fever, cutaneous hemorrhages, vomition with blood, diarrhea, poor appetite, ataxia, and death. The outbreak was confirmed by the detection of the N gene of the porcine reproductive and respiratory syndrome virus (PRRSV) and the VP72 gene of the African swine fever virus (ASFV) by PCR in representative blood samples from affected pigs followed by Sanger sequencing. Mixed infection was also confirmed by simultaneous detection of both the viruses using multiplex PCR. Phylogenetic analysis of both the viruses revealed that the outbreak was related to ASFV and PRRSV strains from China which were also closely related to the PRRSV and ASFV strains from the recent outbreak from India. The study confirmed the involvement of genotype II of ASFV and genotype 2 of PRRSV in the present outbreak. Interestingly, PRRSV associated with the present outbreak was characterized as a highly pathogenic PRRSV. Therefore, the present study indicates the possibility of future waves or further outbreaks of these diseases (PRRS and ASF) in this region. This is the first report of ASFV and PRRSV co-infection in pigs from India.
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Affiliation(s)
- Swaraj Rajkhowa
- ICAR-National Research Centre on Pig, Rani, Guwahati, Assam, 781131, India.
| | - Joyshikh Sonowal
- ICAR-National Research Centre on Pig, Rani, Guwahati, Assam, 781131, India
| | - Seema Rani Pegu
- ICAR-National Research Centre on Pig, Rani, Guwahati, Assam, 781131, India
| | | | - Rajib Deb
- ICAR-National Research Centre on Pig, Rani, Guwahati, Assam, 781131, India
| | - Pranab Jyoti Das
- ICAR-National Research Centre on Pig, Rani, Guwahati, Assam, 781131, India
| | - Juwar Doley
- ICAR-National Research Centre on Pig, Rani, Guwahati, Assam, 781131, India
| | - Souvik Paul
- ICAR-National Research Centre on Pig, Rani, Guwahati, Assam, 781131, India
| | - Vivek Kumar Gupta
- ICAR-National Research Centre on Pig, Rani, Guwahati, Assam, 781131, India
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Singh N, Batra K, Chaudhary D, Punia M, Kumar A, Maan NS, Maan S. Prevalence of porcine viral respiratory diseases in India. Anim Biotechnol 2023; 34:1642-1654. [PMID: 35112631 DOI: 10.1080/10495398.2022.2032117] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
The pig industry is growing rapidly in India and contributes a major share of growth in the livestock sector. Over the last few years, there is a gradual increase in the adoption of pigs for production by economically weaker sections of the country. However, this production is affected by many respiratory diseases which are responsible for significant economic loss. The occurrence and impact of these diseases are still under-documented. The four important pathogens including porcine circovirus type 2 (PCV2), porcine reproductive and respiratory syndrome virus (PRRSV), swine influenza A viruses (SIV) and classical swine fever virus (CSFV) are documented here. These diseases are highly devastating in nature and frequent outbreaks have been reported from different parts of the country. The rapid and specific diagnosis, effective prevention and control measures are required for the eradication of these diseases which is urgently required for the growth of the pig industry. This review highlights the prevalence, epidemiology, diagnostics and information gaps on important respiratory viral pathogens of pigs reported from different parts of India. This review also emphasizes the importance of these viral diseases and the urgent need to develop vaccines and effective measures for the eradication of these diseases.
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Affiliation(s)
- Neha Singh
- College of Veterinary Sciences, Lala Lajpat Rai University of Veterinary and Animal Science (LUVAS), Hisar, India
| | - Kanisht Batra
- College of Veterinary Sciences, Lala Lajpat Rai University of Veterinary and Animal Science (LUVAS), Hisar, India
| | - Deepika Chaudhary
- College of Veterinary Sciences, Lala Lajpat Rai University of Veterinary and Animal Science (LUVAS), Hisar, India
| | - Monika Punia
- Department of Biotechnology, Ch. Devi Lal University, Sirsa, India
| | - Aman Kumar
- College of Veterinary Sciences, Lala Lajpat Rai University of Veterinary and Animal Science (LUVAS), Hisar, India
| | - Narender Singh Maan
- College of Veterinary Sciences, Lala Lajpat Rai University of Veterinary and Animal Science (LUVAS), Hisar, India
| | - Sushila Maan
- College of Veterinary Sciences, Lala Lajpat Rai University of Veterinary and Animal Science (LUVAS), Hisar, India
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Chae H, Roh HS, Jo YM, Kim WG, Chae JB, Shin SU, Kang JW. Development of a one-step reverse transcription-quantitative polymerase chain reaction assay for the detection of porcine reproductive and respiratory syndrome virus. PLoS One 2023; 18:e0293042. [PMID: 37844073 PMCID: PMC10578580 DOI: 10.1371/journal.pone.0293042] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Accepted: 10/03/2023] [Indexed: 10/18/2023] Open
Abstract
Porcine reproductive and respiratory syndrome (PRRS) caused by PRRS virus (PRRSV) is an important disease that severely affects the swine industry and, therefore, warrants rapid and accurate diagnosis for its control. Despite the progress in developing diagnostic tools, including polymerase chain reaction (PCR)-based methods such as reverse transcription quantitative PCR (RT-qPCR) to diagnose PRRSV infection, its diagnosis at the genetic level is challenging because of its high genetic variability. Nevertheless, RT-qPCR is the easiest and fastest method for diagnosing PRRSV. Therefore, this study aimed to develop an RT-qPCR assay for rapid and accurate diagnosis of PRRSV by encompassing all publicly available PRRSV sequences. The developed assay using highly specific primers and probes could detect up to 10 copies of PRRSV-1 and -2 subtypes. Furthermore, a comparison of the performance of the developed assay with those of two commercial kits widely used in South Korea demonstrated the higher efficiency of the developed assay in detecting PRRSV infections in field samples. For PRRSV-1 detection, the developed assay showed a diagnostic agreement of 97.7% with the results of ORF5 sequencing, while for commercial kits, it showed 95.3% and 72.1% agreement. For PRRSV-2, the developed assay showed a diagnostic agreement of 97.7%, whereas the commercial kits showed 93% and 90.7% agreement. In conclusion, we developed an assay with higher accuracy than those of the tested commercial kits, which will contribute markedly to global PRRSV control.
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Affiliation(s)
- Hansong Chae
- R&D Center of Animal Technology, Animal Industry Data Korea, Gangnam-gu, Seoul, South Korea
| | - Hyun Soo Roh
- R&D Center of Animal Technology, Animal Industry Data Korea, Gangnam-gu, Seoul, South Korea
| | - Young Mi Jo
- R&D Center of Animal Technology, Animal Industry Data Korea, Gangnam-gu, Seoul, South Korea
| | - Won Gyeong Kim
- R&D Center of Animal Technology, Animal Industry Data Korea, Gangnam-gu, Seoul, South Korea
| | - Jeong Byoung Chae
- R&D Center of Animal Technology, Animal Industry Data Korea, Gangnam-gu, Seoul, South Korea
| | - Seung-Uk Shin
- R&D Center of Animal Technology, Animal Industry Data Korea, Gangnam-gu, Seoul, South Korea
| | - Jung Won Kang
- R&D Center of Animal Technology, Animal Industry Data Korea, Gangnam-gu, Seoul, South Korea
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Kombiah S, Senthilkumar D, Kumar M, Sivasankar P, Singh VP, Rajukumar K. Growth kinetics of an Indian isolate of highly pathogenic porcine reproductive and respiratory syndrome virus in MARC-145 cells. Virusdisease 2022; 33:208-214. [DOI: 10.1007/s13337-022-00773-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2022] [Accepted: 06/13/2022] [Indexed: 11/28/2022] Open
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Point of care diagnostics and non-invasive sampling strategy: a review on major advances in veterinary diagnostics. ACTA VET BRNO 2022. [DOI: 10.2754/avb202291010017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The use of point of care diagnostics (POCD) in animal diseases has steadily increased over the years since its introduction. Its potential application to diagnose infectious diseases in remote and resource limited settings have made it an ideal diagnostic in animal disease diagnosis and surveillance. The rapid increase in incidence of emerging infectious diseases requires urgent attention where POCD could be indispensable tools for immediate detection and early warning of a potential pathogen. The advantages of being rapid, easily affordable and the ability to diagnose an infectious disease on spot has driven an intense effort to refine and build on the existing technologies to generate advanced POCD with incremental improvements in analytical performance to diagnose a broad spectrum of animal diseases. The rural communities in developing countries are invariably affected by the burden of infectious animal diseases due to limited access to diagnostics and animal health personnel. Besides, the alarming trend of emerging and transboundary diseases with pathogen spill-overs at livestock-wildlife interfaces has been identified as a threat to the domestic population and wildlife conservation. Under such circumstances, POCD coupled with non-invasive sampling techniques could be successfully deployed at field level without the use of sophisticated laboratory infrastructures. This review illustrates the current and prospective POCD for existing and emerging animal diseases, the status of non-invasive sampling strategies for animal diseases, and the tremendous potential of POCD to uplift the status of global animal health care.
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Bhattacharjee U, Sen A, Sharma I. A retrospective study reveals the Porcine circovirus-2f genotype predominant in the indigenous pig population of North-eastern India. INFECTION GENETICS AND EVOLUTION 2021; 96:105100. [PMID: 34619393 DOI: 10.1016/j.meegid.2021.105100] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2021] [Revised: 09/26/2021] [Accepted: 09/29/2021] [Indexed: 10/20/2022]
Abstract
Porcine circovirus-2 (PCV2) is a widespread virus and presents sub-clinically in most of the swineherd. Globally, eight genotypes of PCV2 have been identified that is PCV2a to 2h. To determine the region-wide genotype distribution of PCV2 infection, with additional reference to indigenous breeds, a total of 1314 pig's clinical samples from the eight states of North-eastern India between 2011 and 2014; were analyzed. The overall prevalence rate of PCV2 in this region was 28.2% (370/1314) by PCR. The state-wise PCR based PCV2 prevalence rate was: Tripura (20.8%), Nagaland (25.0%), Meghalaya (25.8%), Assam (32.1%), Sikkim (32.6%), Manipur (33.3%), Mizoram (36.7%) and Arunachal Pradesh (42.3%). Subsequently, a total of 29 complete genomes of PCV2 were amplified and sequenced from these PCV2 positive samples. The phylogenetic tree represents that the 29 PCV2 isolates of this study were divided into four distinct genetic groups; PCV2a, PCV2b, PCV2d, and PCV2f. Among these, 14 PCV2 strains were classified as PCV2f, 13 classified as PCV2d, and one isolate of each classified as PCV2a and PCV2b. All the 14 PCV2f strains appeared from indigenous pigs of this region. Based on the date of collection, the present study further describes that the PCV2f genotypes circulate in the indigenous pigs' population back in 2011. The amino acid residues and the atomic coordinate structure (3D model) of PCV2f capsid protein represents similarity to PCV2d capsid protein support the efficacy of the existing PCV2 vaccine against the PCV2f. The observation of this study helps to understand the genotype distribution of PCV2 and stands as a reference for future molecular epidemiological studies in North-eastern India.
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Affiliation(s)
- Uttaran Bhattacharjee
- Department of Microbiology, Assam University, Silchar, Assam, India; Division of Animal Health, Indian Council of Agricultural Research-Research Complex for North-Eastern Hill Region (ICAR-RC for NEH Region), Umiam, Barapani, Meghalaya, India
| | - Arnab Sen
- Division of Animal Health, Indian Council of Agricultural Research-Research Complex for North-Eastern Hill Region (ICAR-RC for NEH Region), Umiam, Barapani, Meghalaya, India
| | - Indu Sharma
- Department of Microbiology, Assam University, Silchar, Assam, India.
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Akter F, Roychoudhury P, Dutta TK, Subudhi PK, Kumar S, Gali JM, Behera P, Singh YD. Isolation and molecular characterization of GP5 glycoprotein gene of Betaarterivirus suid 2 from Mizoram, India. Virusdisease 2021; 32:748-756. [PMID: 34458505 PMCID: PMC8378527 DOI: 10.1007/s13337-021-00735-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2021] [Accepted: 08/04/2021] [Indexed: 11/25/2022] Open
Abstract
Porcine reproductive and respiratory syndrome (PRRS) is a serious swine disease causing great economic impact worldwide. The emergence of highly pathogenic strains in Asian countries is associated with large scale mortality in all age groups of pigs besides the classical presentation of severe respiratory distress, pneumonia, and a series of reproductive disorders in sows, like late-term abortion, premature farrowing, and an increased number of stillborn piglets. The present study was designed with the aim of isolation and characterization of the Betaarterivirus suid 2 from outbreaks in Mizoram in primary porcine alveolar macrophage and subsequently characterized the GP5 gene sequence of the isolate in terms of phylogenetic analysis and deduce amino acid sequence comparison. Virus propagation was performed in the porcine alveolar macrophage (PAM) primary cell culture and confirmed by immunoperoxidase test, FAT, and nested RT-PCR. The full-length GP5 gene (603nt) was amplified from the isolate and subsequently cloned and sequenced (MN928985). Phylogenetic analysis and sequence comparison of the present isolate was found to have similarity 98.7-98.8% with Myanmar HP-PRRS strains, 98-98.5% with Vietnam strains, 98.2-98.3% with China strains, indicating a close lineage with highly pathogenic PRRS strains. In deduced amino acid sequence analysis, one mutation was found in the primary neutralizing epitope (PNE) at position 39L → I39 and one more mutation was also found in the decoy epitope (DCE) at position 30 N → D30. The amino acid at this position is an N-linked glycosylation site, and mutation of the N-linked glycosylation is an immune escaped strategy adopted by this virus causing a persistent infection in the natural host.
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Affiliation(s)
- Fatema Akter
- Department of Veterinary Microbiology, College of Veterinary Sciences and Animal Husbandry, CAU, Aizawl, Mizoram India
| | - Parimal Roychoudhury
- Department of Veterinary Microbiology, College of Veterinary Sciences and Animal Husbandry, CAU, Aizawl, Mizoram India
| | - Tapan Kumar Dutta
- Department of Veterinary Microbiology, College of Veterinary Sciences and Animal Husbandry, CAU, Aizawl, Mizoram India
| | - Prasant Kumar Subudhi
- Department of Veterinary Microbiology, College of Veterinary Sciences and Animal Husbandry, CAU, Aizawl, Mizoram India
| | - Sanjeev Kumar
- Department of Veterinary Microbiology, College of Veterinary Sciences and Animal Husbandry, CAU, Aizawl, Mizoram India
| | - Jagan Mohanarao Gali
- Department of Veterinary Physiology and Biochemistry, College of Veterinary Sciences and Animal Husbandry, CAU, Aizawl, Mizoram India
| | - Parthasarathi Behera
- Department of Veterinary Physiology and Biochemistry, College of Veterinary Sciences and Animal Husbandry, CAU, Aizawl, Mizoram India
| | - Yengkhom Damodar Singh
- Department of Veterinary Pathology, College of Veterinary Sciences and Animal Husbandry, CAU, Aizawl, Mizoram India
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Rajkhowa TK, Thanga L, Hauhnar L, Zodinpui D, Subbiah M. Molecular detection and characterization of highly pathogenic porcine reproductive and respiratory syndrome virus from a natural outbreak in wild pigs, Mizoram, India. Transbound Emerg Dis 2021; 69:e288-e298. [PMID: 34406700 DOI: 10.1111/tbed.14296] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2021] [Revised: 03/28/2021] [Accepted: 08/17/2021] [Indexed: 11/29/2022]
Abstract
This study reports for the first time a natural outbreak of highly pathogenic porcine reproductive and respiratory syndrome (HP-PRRS) caused by HP-PRRS virus (HP-PRRSV) in wild pigs characterized by sudden onset of depression, anorexia, respiratory distress, and high fever. The disease has caused severe haemorrhagic pneumonia, haemorrhagic lymphadenitis, enlarged spleen with areas of infarction, and petechial haemorrhages on the myocardium and on the surface of kidneys. HP-PRRSV was detected in representative tissue samples by reverse transcription-PCR, and the field strain was isolated in the MA104 cell line. The phylogenetic analyses based on the whole genome sequences and nucleotide sequences of open reading frame 5 (ORF5) gene showed close grouping with the subtype IV of lineage 8/8.7 of PRRSV II, which represents the HP-PRRSV strains that predominate in the pig population of China since 2010. The amino acid sequence analysis of the ORF5 gene revealed the replacement of leucine (L) at position 39 to isoleucine (I) in the primary neutralizing epitope. Among the four potential N glycosylation sites, the N34 was mutated and found to be restricted to only three N glycosylation sites. The present findings have indicated that HP-PRRSV can cause fatal outbreaks and may emerge as a major threat to the wild pig population.
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Affiliation(s)
- Tridib Kumar Rajkhowa
- Department of Veterinary Pathology, College of Veterinary Sciences & Animal Husbandry, Central Agricultural University, Aizawl, Mizoram, India
| | - Lalnun Thanga
- Department of Veterinary Pathology, College of Veterinary Sciences & Animal Husbandry, Central Agricultural University, Aizawl, Mizoram, India
| | - Lalthapui Hauhnar
- Department of Veterinary Pathology, College of Veterinary Sciences & Animal Husbandry, Central Agricultural University, Aizawl, Mizoram, India
| | - Doris Zodinpui
- Department of Veterinary Pathology, College of Veterinary Sciences & Animal Husbandry, Central Agricultural University, Aizawl, Mizoram, India
| | - Madhuri Subbiah
- National Institute of Animal Biotechnology, Hyderabad, Telangana, India
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KAWLNI LALLIANPUII, DUTTA TK, ROYCHUDHURY P, SEN ARNAB, BARMAN NN, SUBUDHI PK, RALTE ESTHERLALZOLIANI. Molecular detection and seroprevalence of classical swine fever virus from 2016 to 2018 in pigs of Mizoram, India. THE INDIAN JOURNAL OF ANIMAL SCIENCES 2021. [DOI: 10.56093/ijans.v90i12.113157] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
Classical swine fever (CSF) is a fatal endemic disease of pig population of North eastern India in particular and India in general. Present study revealed molecular detection of CSFV and seroprevalence of the disease in pig population of Mizoram, India during 2016–2018. Serum samples from apparently healthy, unvaccinated pigs were collected in collaboration with the State Animal Husbandry and Veterinary Department, Mizoram and a total of 594 serum samples from 7 districts were subjected to detection of CSFV specific antibodies by indirect ELISA. A total of 206 (34.68%) serum samples were positive for CSFV antibodies by ELISA. District wise, Saiha district showed highest seroprevalence of the disease followed by Kolasib and Serchhip. Apart from this, during the same time period, CSFV suspected samples received in the Department of Veterinary Microbiology consisting of 269 serum samples, 10 whole blood and 83 tissue samples obtained from 8 districts of Mizoram were subjected to detection of NS5b and E2 mRNA transcripts by nRT-PCR of which a total of 42 (11.60%) samples including serum (5.58%), tissues (27.71%) and whole blood (40%) were positive for the NS5b and E2 mRNA transcripts, specific for CSFV. District wise analysis revealed that Aizawl has the highest percentage of positive samples of CSFV followed by Saiha and Lawngtlai district.
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Investigation of congenital tremor associated with Classical swine fever virus genotype 2.2 in an organized pig farm in north-eastern India. Virusdisease 2021; 32:173-182. [PMID: 33748346 PMCID: PMC7965332 DOI: 10.1007/s13337-021-00678-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Accepted: 03/02/2021] [Indexed: 12/04/2022] Open
Abstract
The present study describes an outbreak of Classical swine fever (CSF) in an organized pig farm followed by an episode of CSF virus (CSFV) associated congenital tremors in piglets. The outbreak was recorded in a newly procured herd of Hampshire pigs housed adjacent to the existing pigs of the farm. The recorded CSF outbreak caused a mortality of 100% in the newly procured and 54.28% in the existing herd. As the disease subsides, the clinically recovered boars were served naturally with Tamworth gilts. Though, the sows farrowed on usual gestation period, litters born to each sow showed congenital tremors and eventually died within 24 h of birth. Necropsy analysis of affected piglets was indicative of CSFV infection and was further confirmed using RT-PCR signifying a transplacental infection. The CSFV strains from the initial outbreak and post outbreak episode of congenital tremors were successfully isolated in PK-15 cells and detected in indirect FAT and RT-PCR. Phylogenetic analysis based on E2 gene and 5′NTR of CSFV grouped the isolates within the genotype 2.2 and revealed close resemblance with previously reported Indian isolates of CSFV genotype 2.2 origin. To the best of our knowledge, this is the first report of CSFV induced congenital form reported from India under natural conditions.
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Assessment of Risk Factors of African Swine Fever in India: Perspectives on Future Outbreaks and Control Strategies. Pathogens 2020; 9:pathogens9121044. [PMID: 33322760 PMCID: PMC7763524 DOI: 10.3390/pathogens9121044] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2020] [Revised: 11/27/2020] [Accepted: 12/03/2020] [Indexed: 01/02/2023] Open
Abstract
African swine fever (ASF) is one of the most important transboundary diseases of pigs. ASF has been identified in India for the first time in domestic pigs from outbreaks reported in two of the northeastern states, Arunachal Pradesh and Assam in 2020. A total of 11 ASF outbreaks in different regions killed over 3700 pigs and devastated the economy of small-scale livestock owners of both the states. Considering the first outbreak of ASF in India, a generic risk assessment framework was determined to identify potential risk factors that might favor future emergence of the disease. Based on the Indian scenario, we considered population density of host, farming practice, availability of biological vectors and wildlife reservoirs, epidemiological cycles, and international trade to analyze the possibility of future outbreaks of ASF and chances of establishment of endemism. On critical analysis of the identified risk factors associated with ASFV transmission, we observed that the risk factors are well preserved in the Indian geography and might participate in future outbreaks, further disseminating the disease to nearby countries. Since no vaccine is currently available against ASF, the domestic and the wild pigs (wild boars and the endangered pygmy hogs native to India) of this region are under constant threat of infection. For the near future, this region will have to continue to rely on the implementation of preventive measures to avoid the devastating losses that outbreaks can cause. The various adaptive control strategies to minimize the risks associated with the transmission of ASF, keeping our views to Indian settings, have been described. The risk-analysis framework presented in the study will give a further understanding of the dynamics of disease transmission and will help to design control strategies and corresponding measures to minimize the catastrophic consequences of ASF disease.
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Kashyap SP, Hiremath J, Vinutha S, Patil SS, Suresh KP, Roy P, Hemadri D. Development of recombinant nucleocapsid protein-based indirect enzyme-linked immunosorbent assay for sero-survey of porcine reproductive and respiratory syndrome. Vet World 2020; 13:2587-2595. [PMID: 33487975 PMCID: PMC7811545 DOI: 10.14202/vetworld.2020.2587-2595] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2020] [Accepted: 10/21/2020] [Indexed: 12/17/2022] Open
Abstract
Background and Aim: Porcine reproductive and respiratory syndrome (PRRS) is a disease endemic in many countries and is of economic importance. India was free from PRRS until the first outbreak was reported from a North-East Indian state in 2013. Since then, disease outbreaks have been reported from North-East India and the pilot study conducted earlier showed that it is gradually spreading to the rest of India. Considering there are no locally developed population screening tests available for PRRS and imported diagnostic/screening tests are expensive, the present study was aimed at developing recombinant nucleocapsid (rN) protein-based indirect enzyme-linked immunosorbent assay (iELISA). Materials and Methods: The rN protein of PRRS virus (PRRSV) was produced following standard cloning, expression, and purification procedures. Using this antigen, iELISA was optimized for the detection of serum antibodies to PRRSV. The sensitivity and specificity of the test were assessed by comparing it with a commercial PRRSV antibody detection kit. Result: A total of 745 serum samples from ten different states of India were screened using the developed iELISA. The iELISA had a relative specificity of 76.18% and sensitivity of 82.61% compared to the commercial ELISA (Priocheck PRRSV ELISA kit, Thermo Fisher Scientific, USA). Conclusion: The iELISA, which deployed rN protein from Indian PRRSV, was found to be suitable in the serological survey and may be a useful tool in future disease surveillance programs.
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Affiliation(s)
- S Phani Kashyap
- ICAR-National Institute of Veterinary Epidemiology and Disease Informatics, P.B. No. 6450, Yelahanka, Bengaluru, Karnataka, India.,Department of Microbiology and Biotechnology, Jain University, Bengaluru, Karnataka, India
| | - Jagadish Hiremath
- ICAR-National Institute of Veterinary Epidemiology and Disease Informatics, P.B. No. 6450, Yelahanka, Bengaluru, Karnataka, India
| | - S Vinutha
- ICAR-National Institute of Veterinary Epidemiology and Disease Informatics, P.B. No. 6450, Yelahanka, Bengaluru, Karnataka, India.,Department of Microbiology and Biotechnology, Jain University, Bengaluru, Karnataka, India
| | - Sharanagouda S Patil
- ICAR-National Institute of Veterinary Epidemiology and Disease Informatics, P.B. No. 6450, Yelahanka, Bengaluru, Karnataka, India
| | - Kuralayanapalya P Suresh
- ICAR-National Institute of Veterinary Epidemiology and Disease Informatics, P.B. No. 6450, Yelahanka, Bengaluru, Karnataka, India
| | - Parimal Roy
- ICAR-National Institute of Veterinary Epidemiology and Disease Informatics, P.B. No. 6450, Yelahanka, Bengaluru, Karnataka, India
| | - Divakar Hemadri
- ICAR-National Institute of Veterinary Epidemiology and Disease Informatics, P.B. No. 6450, Yelahanka, Bengaluru, Karnataka, India
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CHANDRANAIK BM, SHETTY VASANTHKUMAR, GIRIDHAR P, REDDY POORVI, MEGHANA P, VENKATESHA MD, BYREGOWDA SM. Molecular epidemiology of Porcine Reproductive and Respiratory Syndrome Virus causing outbreaks in Karnataka. THE INDIAN JOURNAL OF ANIMAL SCIENCES 2019. [DOI: 10.56093/ijans.v89i10.94998] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
We describe the molecular epidemiology of Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) involved in outbreaks and massive spread of Porcine Reproductive and Respiratory Syndrome (PRRS) in Karnataka state of India during the year 2017. The study involved investigation of outbreaks in three districts.viz, Udupi, Dakshina kannada and Bengaluru in Karnataka. The disease was characterised by large scale piglet mortality with severe respiratory distress and abortions in pregnant sows. The study recorded death of 394 piglets, 131 adults and abortions in 82 pregnant sows. The organ samples collected from dead pigs were found negative for Classical swine fever virus by 5’UTR gene based Reverse transcription polymerase chain reaction (RT-PCR). RT-PCR targeting full length ORF5 gene of PRRSV on spleen and lung samples of dead pigs yielded specific amplicon of 803 bp indicating the presence of PRRSV. The phylogenetic analysis of the nucleotide sequences derived from ORF5 gene of PRRSV involved in the current outbreaks revealed 99.99% sequence homology with the highly pathogenic PRRSV of genotype 2 (North American type) from China and India (Mizoram state). Since pig husbandry plays a significant role in socio-economic upliftment of the poor and marginalised farmers in the country, it’s time to put in place effective prevention and control measures for PRRS, before it cripples pig industry in India and its surrounding world. Present study is the first epidemiological report of PRRS outbreaks in South India.
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16
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RAJKHOWA TK, VANLALRUATI C, SINGH YD, RAVINDRAN R, ARYA RS. Genetic variation of highly pathogenic Indian porcine reproductive and respiratory syndrome viruses after introduction in 2013. THE INDIAN JOURNAL OF ANIMAL SCIENCES 2018. [DOI: 10.56093/ijans.v88i10.84071] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
To study its possible link to pathogenicity, the genomic variation in full ORF5 and ORF7 genes, and their encoded proteins in 26 field HP-PRRSV isolates from three major HP-PRRS outbreaks occurred in India, since 2013 was analysed. Sequence analysis and phylogenetic tree revealed involvement of genetically different strain in each outbreak of India rather persistence of a single strain. Analysis and comparison of N protein amino acid sequences of HP-PRRSV with VR2332 revealed consistent mutation at position 15D to N or K and 46 K to R in all the HP-PRRSV. GP5 protein showed consistent mutations at 29 positions from that of VR2332. The potential Nglycosylation sites in GP5 was found variable from 4–5 with one additional N-glycan moiety around the neutralizing epitope B. However, the ‘decoy’ epitope A was found highly conserved in all the HP-PRRSV.
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Senthilkumar D, Rajukumar K, Sen A, Kumar M, Shrivastava D, Kalaiyarasu S, Gautam S, Singh F, Kulkarni DD, Singh VP. Pathogenic characterization of porcine reproductive and respiratory syndrome virus of Indian origin in experimentally infected piglets. Transbound Emerg Dis 2018; 65:1522-1536. [PMID: 29790662 DOI: 10.1111/tbed.12893] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2018] [Revised: 03/28/2018] [Accepted: 04/09/2018] [Indexed: 12/15/2022]
Abstract
Porcine reproductive and respiratory syndrome (PRRS) is an economically important transboundary viral disease of pigs confronting the swine industry worldwide. This study was aimed to assess the pathogenic potential of PRRS virus belonging to genotype 2 that emerged in India in 2013. Nine 6-week-old piglets were inoculated intranasally with 2 × 105.75 TCID50 /ml of PRRSV (Ind-297221/2013). Three piglets were kept as uninfected controls. Blood and nasal swabs were collected daily up to 7 days post-infection (dpi) and on alternate days subsequently. Piglets were necropsied for tissue sample collection either on death or after euthanasia on 7, 14 or 21 dpi (one uninfected control and three PRRSV-infected piglets per interval). The virus caused high fever, typical blue ear, weight loss, respiratory distress, diarrhoea and leucopenia between 2 and 8 dpi. Two infected piglets died (on 3 and 17 dpi) during the course of study. The presence of virus in serum and nasal secretion was observed up to 19 and 17 dpi, respectively, with the maximum load between 4 and 7 dpi. Seroconversion started 6 dpi and the mean PRRSV antibody titre reached up to 640 by 21 dpi. Virus load was highest in tonsils at all the intervals, whereas in spleen and lymph nodes load was higher in later intervals. Major microscopic lesions in PRRSV-infected piglets included moderate to severe interstitial pneumonia, lymphoid depletion in tonsils and lymph nodes (cystic), thymic atrophy, reactive hyperplasia followed by lymphoid depletion in spleen. PRRSV antigen was consistently demonstrated by immunoperoxidase test in the lungs, spleen, tonsils and lymph nodes. Antigen distribution was more widespread on 7 and 14 dpi than on 21 dpi. The findings establish that the Indian PRRSV is highly pathogenic to piglets.
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Affiliation(s)
- D Senthilkumar
- ICAR-National Institute of High Security Animal Diseases, Bhopal, Madhya Pradesh, India
| | - K Rajukumar
- ICAR-National Institute of High Security Animal Diseases, Bhopal, Madhya Pradesh, India
| | - A Sen
- ICAR Research Complex for North East Hill Region, Barapani, Meghalaya, India
| | - M Kumar
- ICAR-National Institute of High Security Animal Diseases, Bhopal, Madhya Pradesh, India
| | - D Shrivastava
- ICAR-National Institute of High Security Animal Diseases, Bhopal, Madhya Pradesh, India
| | - S Kalaiyarasu
- ICAR-National Institute of High Security Animal Diseases, Bhopal, Madhya Pradesh, India
| | - S Gautam
- ICAR-Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India
| | - F Singh
- ICAR-National Institute of High Security Animal Diseases, Bhopal, Madhya Pradesh, India
| | - D D Kulkarni
- ICAR-National Institute of High Security Animal Diseases, Bhopal, Madhya Pradesh, India
| | - V P Singh
- ICAR-National Institute of High Security Animal Diseases, Bhopal, Madhya Pradesh, India
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18
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Mukherjee P, Karam A, Singh U, Chakraborty AK, Huidrom S, Sen A, Sharma I. Seroprevalence of selected viral pathogens in pigs reared in organized farms of Meghalaya from 2014 to 16. Vet World 2018; 11:42-47. [PMID: 29479156 PMCID: PMC5813510 DOI: 10.14202/vetworld.2018.42-47] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2017] [Accepted: 12/15/2017] [Indexed: 01/22/2023] Open
Abstract
Aim: A pilot study was carried out to find out the seroprevalence of Porcine circovirus 2 (PCV2), classical swine fever virus (CSFV), and Porcine respiratory and reproductive syndrome virus (PRRS) in pig population of Meghalaya. Materials and Methods: Serum samples were collected from piglets of 40–45 days age group, growers, and sows reared under organized and unorganized management in 11 districts of Meghalaya situated in the Khasi, Jaintia, and Garo hills divisions in the time period of 2014-2016 from apparently healthy and suspected pigs. Seroprevalence of PCV2, CSFV, and PRRS specific antibodies was detected by enzyme-linked immunosorbent assay (ELISA). Results: A total of 1899 serum samples were collected and screened using antibody ELISA kits specific for PCV2, CSFV, and PRRS. The highest antibody prevalence during the selected time periods was detected for PCV2 (80.8% in 2014, 79.1% in 2015, and 96.2% in 2016) followed by CSFV (76.4% in 2014, 66.09% in 2015, and 25.5% in 2016) and PRRS (2.8% in 2014, 2.7% in 2015, and 3.62% in 2016). The result indicates high seroprevalence for PCV2, which can be considered as an inducement factor due to the immunosuppressive nature of the virus, for animals being susceptible to other pathogens in farms where airborne transmission of PCV2 and postweaning multisystemic wasting syndrome among animals reared in close pens can be a major possibility. Conclusions: The data from this study indicates ubiquitous prevalence of PCV2 antibodies in the farm animals along with the endemic presence of swine fever and emergence of PRRS in an organized farm. There are few reports regarding PCV2 infections/outbreaks in pigs associated with reproductive failure from northern and southern part of India, but till date, there are no reports regarding concomitant infection of CSFV and PCV2 from India. Considerable high seropositivity of PCV2 indicates the need for high impact hygiene practice in farms, routine seromonitoring and implementation the vaccination program. To the author’s best knowledge, this is the first documented report on the seroprevalence of PCV2, CSFV, and PRRS from pig population of Meghalaya.
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Affiliation(s)
- Priyanka Mukherjee
- Division of Animal Health, Indian Council of Agricultural Research (ICAR) Research Complex for North Eastern Hill Region, Umiam - 793 103, Meghalaya, India.,Department of Microbiology, Assam University, Silchar - 788 011, Assam, India
| | - Amarjit Karam
- Division of Animal Health, Indian Council of Agricultural Research (ICAR) Research Complex for North Eastern Hill Region, Umiam - 793 103, Meghalaya, India
| | - Uttam Singh
- Division of Animal Health, Indian Council of Agricultural Research (ICAR) Research Complex for North Eastern Hill Region, Umiam - 793 103, Meghalaya, India
| | - Amit Kumar Chakraborty
- Division of Animal Health, Indian Council of Agricultural Research (ICAR) Research Complex for North Eastern Hill Region, Umiam - 793 103, Meghalaya, India.,Department of Microbiology, Assam University, Silchar - 788 011, Assam, India
| | - Surmani Huidrom
- Division of Animal Health, Indian Council of Agricultural Research (ICAR) Research Complex for North Eastern Hill Region, Umiam - 793 103, Meghalaya, India
| | - Arnab Sen
- Division of Animal Health, Indian Council of Agricultural Research (ICAR) Research Complex for North Eastern Hill Region, Umiam - 793 103, Meghalaya, India
| | - Indu Sharma
- Department of Microbiology, Assam University, Silchar - 788 011, Assam, India
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19
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Antiviral Strategies against PRRSV Infection. Trends Microbiol 2017; 25:968-979. [DOI: 10.1016/j.tim.2017.06.001] [Citation(s) in RCA: 97] [Impact Index Per Article: 13.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2017] [Revised: 05/25/2017] [Accepted: 06/01/2017] [Indexed: 01/03/2023]
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20
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Nan Y, Wu C, Gu G, Sun W, Zhang YJ, Zhou EM. Improved Vaccine against PRRSV: Current Progress and Future Perspective. Front Microbiol 2017; 8:1635. [PMID: 28894443 PMCID: PMC5581347 DOI: 10.3389/fmicb.2017.01635] [Citation(s) in RCA: 148] [Impact Index Per Article: 21.1] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2017] [Accepted: 08/11/2017] [Indexed: 12/20/2022] Open
Abstract
Porcine reproductive and respiratory syndrome virus (PRRSV), one of the most economically significant pathogens worldwide, has caused numerous outbreaks during the past 30 years. PRRSV infection causes reproductive failure in sows and respiratory disease in growing and finishing pigs, leading to huge economic losses for the swine industry. This impact has become even more significant with the recent emergence of highly pathogenic PRRSV strains from China, further exacerbating global food security. Since new PRRSV variants are constantly emerging from outbreaks, current strategies for controlling PRRSV have been largely inadequate, even though our understanding of PRRSV virology, evolution and host immune response has been rapidly expanding. Meanwhile, practical experience has revealed numerous safety and efficacy concerns for currently licensed vaccines, such as shedding of modified live virus (MLV), reversion to virulence, recombination between field strains and MLV and failure to elicit protective immunity against heterogeneous virus. Therefore, an effective vaccine against PRRSV infection is urgently needed. Here, we systematically review recent advances in PRRSV vaccine development. Antigenic variations resulting from PRRSV evolution, identification of neutralizing epitopes for heterogeneous isolates, broad neutralizing antibodies against PRRSV, chimeric virus generated by reverse genetics, and novel PRRSV strains with interferon-inducing phenotype will be discussed in detail. Moreover, techniques that could potentially transform current MLV vaccines into a superior vaccine will receive special emphasis, as will new insights for future PRRSV vaccine development. Ultimately, improved PRRSV vaccines may overcome the disadvantages of current vaccines and minimize the PRRS impact to the swine industry.
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Affiliation(s)
- Yuchen Nan
- Department of Preventive Veterinary Medicine, College of Veterinary Medicine, Northwest A&F UniversityYangling, China
| | - Chunyan Wu
- Department of Preventive Veterinary Medicine, College of Veterinary Medicine, Northwest A&F UniversityYangling, China
| | - Guoqian Gu
- Department of Preventive Veterinary Medicine, College of Veterinary Medicine, Northwest A&F UniversityYangling, China
| | - Weiyao Sun
- Department of Preventive Veterinary Medicine, College of Veterinary Medicine, Northwest A&F UniversityYangling, China
| | - Yan-Jin Zhang
- Molecular Virology Laboratory, Virginia-Maryland College of Veterinary Medicine and Maryland Pathogen Research Institute, University of Maryland, College ParkMD, United States
| | - En-Min Zhou
- Department of Preventive Veterinary Medicine, College of Veterinary Medicine, Northwest A&F UniversityYangling, China
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Tian K. NADC30-Like Porcine Reproductive and Respiratory Syndrome in China. Open Virol J 2017; 11:59-65. [PMID: 28839505 PMCID: PMC5543618 DOI: 10.2174/1874357901711010059] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2016] [Revised: 11/01/2016] [Accepted: 02/06/2017] [Indexed: 12/30/2022] Open
Abstract
NADC30-like porcine reproductive and respiratory syndrome virus (PRRSV) has widely spread in China and become locally dominant virus strain in some provinces. Although they are not pathogenic as highly pathogenic PRRSV (HP-RRRSV) that outbreaks since 2006, NADC30-like PRRSVs distinguished themselves by high incidence of recombination with other virus strains which lead to change of virulence. The outbreaks of NADC30-like PRRSV in the vaccinated pig herds suggested that current commercial PRRSV vaccines cannot provide complete protection to the infection. In this review, we have described in detail the current situation of NADC30 PRRSV including epidemiology, genomic characterization, pathogenicity, and efficacy of current commercial vaccines in China.
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Affiliation(s)
- Kegong Tian
- College of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou, China.,OIE Porcine Reproductive and Respiratory Syndrome Laboratory, Beijing, China
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22
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Rajkhowa TK, Jagan Mohanarao G, Gogoi A, Hauhnar L. Indian porcine reproductive and respiratory syndrome virus bears discontinuous deletion of 30 amino acids in nonstructural protein 2. Virusdisease 2016; 27:287-293. [PMID: 28466041 DOI: 10.1007/s13337-016-0341-9] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2016] [Accepted: 08/13/2016] [Indexed: 10/21/2022] Open
Abstract
Since its first outbreak in 2013, porcine reproductive and respiratory syndrome (PRRS) has established as an enzootic disease in pig population of Mizoram state, India. Our previous studies based on phylogenetic analysis of ORF5 and ORF7 gene sequences revealed close relationship of Indian PRRSV with the highly pathogenic variant of PRRSV (HP-PRRSV) of Chinese origin. Despite the control measures, second major outbreak of the disease was recorded in Aizawl district of Mizoram in 2015. The objective of the present study was to examine the origin of PRRSV isolates of 2015 outbreak, identification of deleted region in Nsp2 gene and determination of any genetic variation between 2013 and 2015 isolates of PRRSV. The outbreak was confirmed by the detection of PRRSV-specific antibodies in 57 out of 92 serum samples (61.96 %) and also by RT-PCR in 42 out of 42 necropsy samples (100 %). Nucleotide sequence analysis of Nsp2 coding region of Indian isolates and comparison with reference sequences revealed 90 nucleotides discontinuous deletion further establishes the closeness of Indian PRRSV to Chinese HP-PRRSV. Further, sequence and phylogenetic analysis of ORF5, ORF7 and Nsp2 genes of Indian PRRSV from both 2013 and 2015 revealed that the outbreaks were caused by two different strains of HP-PRRSV closely associated with the Chinese 10 HEB-3 isolate and 07QN isolates of Vietnam origin respectively. The present study confirms that the Indian PRRSV is a highly pathogenic variant of PRRSV and this study serves as the basis for developing practical and effective control measures against this disease.
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Affiliation(s)
- T K Rajkhowa
- Department of Veterinary Pathology, College of Veterinary Sciences and A.H., Central Agricultural University, Selesih, Aizawl, Mizoram India
| | - G Jagan Mohanarao
- Department of Veterinary Physiology and Biochemistry, College of Veterinary Sciences and A.H., Central Agricultural University, Selesih, Aizawl, Mizoram India
| | - A Gogoi
- Department of Veterinary Pathology, College of Veterinary Sciences and A.H., Central Agricultural University, Selesih, Aizawl, Mizoram India
| | - L Hauhnar
- Department of Veterinary Pathology, College of Veterinary Sciences and A.H., Central Agricultural University, Selesih, Aizawl, Mizoram India
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Sharma BK, Manandhar S, Devleesschauwer B. Serological evidence of type 2 (North American genotype) porcine reproductive and respiratory syndrome virus in Nepal. Trop Anim Health Prod 2015; 48:663-6. [PMID: 26712360 DOI: 10.1007/s11250-015-0986-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2015] [Accepted: 12/15/2015] [Indexed: 11/25/2022]
Abstract
Porcine reproductive and respiratory syndrome virus (PRRSV) has spread throughout Asia, causing significant losses to commercial farmers and smallholders. However, little is known about PRRS in Nepal, a South Asian country with a gradually increasing pig industry. In 2011, a pilot project was initiated to identify the status of PRRSV in pigs of the Kathmandu Valley of Nepal. Out of 98 serum samples, 31 (32 %; 95 % CI 23-42 %) were found positive by ELISA. All positive samples belonged to the type 2 (North American) genotype. Molecular evaluation by real-time PCR however did not yield positive results. At the herd level, seropositivity was associated with a history of abortion and premature birth. Veterinarians, farmers and government should be aware of this threat to the Nepalese pig industry and initiate an appropriate response.
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Affiliation(s)
- Barun Kumar Sharma
- Institute of Veterinary, Animal and Biomedical Sciences, Massey University, Palmerston North, New Zealand
- Department of Livestock Services, Ministry of Agricultural Development, Kathmandu, Nepal
| | - Salina Manandhar
- Department of Livestock Services, Ministry of Agricultural Development, Kathmandu, Nepal
| | - Brecht Devleesschauwer
- Emerging Pathogens Institute and Department of Animal Sciences, University of Florida, PO Box 110910, Gainesville, FL, 32611, USA.
- Department of Virology, Parasitology and Immunology, Faculty of Veterinary Medicine, Ghent University, Ghent, Belgium.
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