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Gavadia R, Rasgania J, Sahu N, Nimesh S, Loveleen L, Mor S, Jakhar K. Synthesis of Indole-Linked Thiadiazoles and their Anticancer Action against Triple-Negative Breast Cancer. Chem Biodivers 2024; 21:e202302000. [PMID: 38427723 DOI: 10.1002/cbdv.202302000] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2023] [Revised: 02/23/2024] [Accepted: 03/01/2024] [Indexed: 03/03/2024]
Abstract
With a lack of targeted therapy and significantly high metastasis, heterogeneity, and relapse rates, Triple-Negative Breast Cancer (TNBC) offers substantial treatment challenges and demands more chemotherapeutic interventions. In the present study, indole-endowed thiadiazole derivatives have been synthesized and screened for antiproliferative potency against the triple-negative breast cancer MDA-MB-231 cell line. Compound 4 h, possessing chlorophenyl moiety, displays the best anticancer potency (IC50: 0.43 μM) in the cell viability assay. The title compounds demonstrate substantial docking competency against the EGFR receptor (PDB ID: 3POZ), validating their in-vitro ant proliferative action. With a high docking score (-9.9 to -8.7 kcal/mol), the indole hybrids display significant binding propensity comparable to the co-crystallized ligand TAK-285 and occupy a similar strategic position in the active domain of the designated receptor. The quantum and electronic properties of the integrated templates are evaluated through DFT, and optimal values of the deduced global reactivity indices, such as energy gap, electronegativity, ionization potential, chemical potential, electrophilicity, etc., suggest their apt biochemical reactivity. The indole hybrids show near-appropriate pharmacokinetic efficacy and bioavailability in the in-silico studies, indicating their candidacy for potential drug usage. Promising in-vitro anticancer action and binding interfaces project indole conjugates as potential leads in addressing the TNBC dilemma.
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Affiliation(s)
- Renu Gavadia
- Department of Chemistry, M. D. University, Rohtak, 124001, Haryana, India
| | - Jyoti Rasgania
- Department of Chemistry, M. D. University, Rohtak, 124001, Haryana, India
| | - Neetu Sahu
- Department of Chemistry, M. D. University, Rohtak, 124001, Haryana, India
| | - Surendra Nimesh
- Department of Biotechnology, School of Life Sciences, Central University of Rajasthan, Ajmer, 305817, India
| | - Lacy Loveleen
- Department of Biotechnology, School of Life Sciences, Central University of Rajasthan, Ajmer, 305817, India
| | - Satbir Mor
- Department of Chemistry, Guru Jambheshwar University of Science and Technology, Hisar, 125001, Haryana, India
| | - Komal Jakhar
- Department of Chemistry, M. D. University, Rohtak, 124001, Haryana, India
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Kinani AABY, Abdulkareem Mahmood E, Shoaei SM, Heravi MRP, Habibzadeh S, Ebadi AG, Amini I, Vessally E. The chemical reaction of thioindole and [20] fullerene and the use of DFT to estimate some quantum chemical descriptors. J Sulphur Chem 2022. [DOI: 10.1080/17415993.2022.2139146] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Ahmad AB Yosef Kinani
- Department of pharmaceutics College of pharmacy, Al Farahidi University, Baghdad, Iraq
| | - Evan Abdulkareem Mahmood
- Medical Laboratory Sciences Department, College of Health Sciences, University of Human Development, Sulaymaniyah, Iraq
| | | | | | | | - Abdol Ghaffar Ebadi
- Department of Agriculture, Jouybar Branch, Islamic Azad University, Jouybar, Iran
| | - Issa Amini
- Department of Chemistry, Payame Noor University, Tehran, Iran
| | - Esmail Vessally
- Department of Chemistry, Payame Noor University, Tehran, Iran
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Investigation of the adsorption of a DNA based purine derivative on N/B-doped coronene and coronene by means of DFT and NCI interaction analysis. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.120373] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Adsorption of Pyrimidin-2-amine (PA) on Graphene Quantum Dots (GQDs): Non-Covalent Interaction Study. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.120654] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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Ullah Z, Jee Kim H, Sheena Mary Y, Wook Kwon H. Insights into Caffeine Adsorption on the Surface of Corannulene: A Sensor Study. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.120592] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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Sumanene as a delivery carrier for methimazole drug: DFT, AIM, SERS and solvent effects. COMPUT THEOR CHEM 2022. [DOI: 10.1016/j.comptc.2022.113811] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Al-Otaibi JS, Mary YS, Mary YS. DFT analysis of valproic acid adsorption onto Al 12/B 12-N 12/P 12 nanocages with solvent effects. J Mol Model 2022; 28:98. [PMID: 35322870 DOI: 10.1007/s00894-022-05088-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2022] [Accepted: 03/11/2022] [Indexed: 01/30/2023]
Abstract
Using density functional theory, the adsorption of valproic acid onto the surface of fullerene-like nanocages was investigated. Valproic acid interacts with the nanocages through the carboxylic group with energies of - 144.14, - 109.71, - 105.22, and - 84.96 kcal/mol. The frontier molecular orbital (FMO) energy levels were considerably altered upon adsorption, resulting in a reduction in energy gap and increase in electrical conductivity. This suggests that nanocages could be used as sensors as well as options for drug administration in biological systems. Solvation effects in water are also reported.
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Affiliation(s)
- Jamelah S Al-Otaibi
- Department of Chemistry, College of Science, Princess Nourah Bint Abdulrahman University, P.O. Box 84428, Riyadh, 11671, Saudi Arabia.
| | - Y Sheena Mary
- Thushara, Neethinagar-64, Pattathanam, Kollam, Kerala, India
| | - Y Shyma Mary
- Thushara, Neethinagar-64, Pattathanam, Kollam, Kerala, India
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Majumdar D, Tüzün B, Pal TK, Das S, Bankura K. Architectural View of Flexible Aliphatic –OH Group Coordinated Hemi-Directed Pb(II)-Salen Coordination Polymer: Synthesis, Crystal Structure, Spectroscopic Insights, Supramolecular Topographies, and DFT Perspective. J Inorg Organomet Polym Mater 2022. [DOI: 10.1007/s10904-021-02194-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
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9
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Majumdar D, Pal TK, Sakib SA, Das S, Bankura K, Mishra D. Synthesis, spectroscopic characterization, and SC-XRD study of one privileged heteronuclear Ni(II)/Hg(II)-Salen complex: An exclusive DFT outlook. INORG CHEM COMMUN 2021. [DOI: 10.1016/j.inoche.2021.108609] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Alaşalvar C, Öztürk N, Gökce H, Güder A, Menteşe E, Bektaş H. Synthesis, structural, spectral, antioxidant, bioactivity and molecular docking investigations of a novel triazole derivative. J Biomol Struct Dyn 2021; 40:6642-6655. [PMID: 33594957 DOI: 10.1080/07391102.2021.1887764] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
The structural, spectroscopic and electronic properties of 4-(4-nitrophenyl)-5-(pyridin-3-yl)-2,4-dihydro-3H-1,2,4-triazole-3-thione have been analyzed by using single crystal X-ray diffraction (SCXRD), 1H and 13C NMR chemical shifts and FT-IR spectroscopic methods both theoretically and experimentally. The tautomeric (thiol and thione) energetic analysis results, structural optimization parameters (bond lengths and angles), vibrational wavenumbers, proton and carbon NMR chemical shifts, UV-Vis. parameters, the highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) analyses and Molecular Electrostatic Potential (MEP) surface have been calculated by using DFT/B3LYP quantum chemical method with 6-311++G(2d,2p) basis set to compare with the experimental results. The computed geometry parameters, vibrational wavenumbers, and NMR chemical shifts have been in good agreement with the experimental results. It should be noted that the radical scavenging activities of the title compound have been evaluated by using different test methods i.e. 2,2-Diphenyl-1-picrylhydrazyl (DPPH), N,N-dimethyl-p-phenylenediamine (DMPD) and 2,2'-azino-bis-(3-ethylbenzothiazoline-6-sulfonate) (ABTS). According to obtained results, the title compound displayed DPPH (SC50 19.42 ± 0.11 μg/mL), DMPD (SC50 21.13 ± 0.08 μg/mL) and ABTS (SC50 38.17 ± 0.25 μg/mL) scavenging activities. Also, these results have been compared with Butylated hydroxyanisole (BHA), Rutin (RUT) and Trolox (TRO) used as standard compounds. The physicochemical, pharmacokinetic, and toxicity features of the compound have been determined by using drug-likeness and in silico ADMET investigations. The interaction results with SARS-CoV-2 main protease (Mpro) of the title ligand compound have been analyzed via the help of molecular docking study.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Can Alaşalvar
- Technical Science Vocational High School, Giresun University, Giresun, Turkey
| | - Nuri Öztürk
- Dereli Vocational School, Giresun University, Giresun, Turkey
| | - Halil Gökce
- Vocational High School of Health Services, Giresun University, Giresun, Turkey
| | - Aytaç Güder
- Vocational High School of Health Services, Giresun University, Giresun, Turkey
| | - Emre Menteşe
- Faculty of Art and Science, Recep Tayyip Erdogan University, Rize, Turkey
| | - Hakan Bektaş
- Faculty of Art and Science, Giresun University, Giresun, Turkey
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