Application of electro-active biofilms

A review of microbial fuel cell and its diversification in the development of green energy technology

The advancement of microbial fuel cell technology is rapidly growing, with extensive research and well-established methodologies for enhancing structural performance. This terminology attracts researchers to compare the MFC devices on a technological basis. The architectural and scientific successes of MFCs are only possible with the knowledge of engineering and technical fields. This involves the structure of MFCs, using substrates and architectural backbones regarding electrode advancement, separators and system parameter measures. Knowing about the MFCs facilitates the systematic knowledge of engineering and scientific principles. The current situation of rapid urbanization and industrial growth is demanding the augmented engineering goods and production which results in unsolicited burden on traditional wastewater treatment plants. Consequently, posing health hazards and disturbing aquatic veracity due to partial and untreated wastewater. Therefore, it's sensible to evaluate the performance of MFCs as an unconventional treatment method over conventional one to treat the wastewater. However, MFCs some benefits like power generation, stumpy carbon emission and wastewater treatment are the main reasons behind the implementation. Nonetheless, few challenges like low power generation, scaling up are still the major areas needs to be focused so as to make MFCs sustainable one. We have focused on few archetypes which majorities have been laboratory scale in operations. To ensure the efficiency MFCs are needed to integrate and compatible with conventional wastewater treatment schemes. This review intended to explore the diversification in architecture of MFCs, exploration of MFCs ingredients and to provide the foreseen platform for the researchers in one source, so as to establish the channel for scaling up the technology. Further, the present review show that the MFC with different polymer membranes and cathode and anode modification presents significant role for potential commercial applications after change the system form prototype to pilot scale.

Examining the resistance and resilience of anode-respiring Shewanella oneidensis biohybrid using microsensors

Immobilizing electro-active microbes within polymer matrices (thereby forming biohybrids) is a promising approach to accelerate microbial attachment to electrodes and increase the biofilm robustness. However, little is known on the fine scale chemical environment that develops within the electro-active biohybrids. Herein, we develop a biohybrid by immobilizing a culture of Shewanella oneidensis MR1 in agar matrix on the surface of a graphite electrode poised at +0.25 V. The resulting bioanode (3-6 mm thick) was grown under anoxic conditions and produced a steady current of 40 μA. Oxygen and pH distribution within the biohybrid were characterized in-situ using microsensors. As Shewanella is a facultative aerobe, it will halt the current production in the presence of oxygen. Thus, in addition, we investigated the alteration of the microenvironment during and after aeration of the medium to evaluate the oxygen tolerance of the system. During aeration, oxygen was effectively consumed in the top layers of the biofilm, leaving a 400-900 μm thick anoxic zone on the anode surface, that sustained >60% of the initial current. Current production recovered to pre-oxic condition within 5 h after the aeration was stopped, showing that immobilization can promote both high resistance and resilience of the system. Despite the absence of strong buffering conditions, pH profiles indicated a maximum drop of 0.2 units across the biohybrid. Characterizing the chemical microenvironment helps to elucidate the mechanistic functioning of artificial biofilms and hold a great potential for the designing of future, more effective biohybrid electrodes.

Unraveling the contemporary use of microbial fuel cell in pesticide degradation and simultaneous electricity generation: a review

Pesticide is an inevitable substance used worldwide to kill pests, but their indiscriminate use has posed serious complications to health and the environment. Various physical, chemical, and biological methods are employed for pesticide treatment, but this paper deals with microbial fuel cell (MFC) as a futuristic technology for pesticide degradation with electricity production. In MFC, organic compounds are utilized as the carbon source for electricity production and the generation of electrons which can be replaced with pollutants such as dyes, antibiotics, and pesticides as carbon sources. However, MFC is been widely studied for a decade for electricity production, but its implementation in pesticide degradation is less known. We fill this void by depicting a real picture of the global pesticide scenario with an eagle eye view of the bioremediation techniques implemented for pesticide treatment with phytoremediation and rhizoremediation as effective techniques for efficient pesticide removal. The enormous literature survey has revealed that not many researchers have ventured into this new arena of MFC employed for pesticide degradation. Based on the Scopus database, an increase in annual trend from 2014 to 2023 is observed for MFC-implemented pesticide remediation. However, a novel MFC to date for effective remediation of pesticides with simultaneous electricity generation is discussed for the first time. Furthermore, the limitation of MFC technology and the implementation of MFC and rhizoremediation as a clubbed system which is the least applied can be seen as promising and futuristic approaches to enhance pesticide degradation by bacteria and electricity as a by-product.

Starvation combined with constant anode potential triggers intracellular electron storage in electro-active biofilms

The accumulation of electrons in the form of Extracellular Polymeric Substances (EPS) and poly-hydroxyalkanoates (PHA) has been studied in anaerobic processes by adjusting the access of microorganisms to the electron donor and final electron acceptor. In Bio-electrochemical systems (BESs), intermittent anode potential regimes have also recently been used to study electron storage in anodic electro-active biofilms (EABfs), but the effect of electron donor feeding mode on electron storage has not been explored. Therefore, in this study, the accumulation of electrons in the form of EPS and PHA was studied as a function of the operating conditions. EABfs were grown under both constant and intermittent anode potential regimes and fed with acetate (electron donor) continuously or in batch. Confocal Laser Scanning Microscopy (CLSM) and Fourier-Transform Infrared Spectroscopy (FTIR) were used to assess electron storage. The range of Coulombic efficiencies, from 25 to 82%, and the biomass yields, between 10 and 20%, indicate that storage could have been an alternative electron consuming process. From image processing, a 0.92 pixel ratio of poly-hydroxybutyrate (PHB) and amount of cells was found in the batch fed EABf grown under a constant anode potential. This storage was linked to the presence of living Geobacter and shows that energy gain and carbon source starvation were the triggers for intracellular electron storage. The highest EPS content (extracellular storage) was observed in the continuously fed EABf under an intermittent anode potential, showing that constant access to electron donor and intermittent access to the electron acceptor leads to the formation of EPS from the excess energy gained. Tailoring operating conditions can thus steer the microbial community and result in a trained EABf to perform a desired biological conversion, which can be beneficial for a more efficient and optimized BES.

Innovative electrochemical biosensor with nitrifying biofilm and nitrite oxidation signal for comprehensive toxicity detection in Tuojiang River

Water toxicity detection, as a valuable supplement to conventional water quality measurement, is an important method for evaluating water environmental quality standards. However, the toxicity of composite pollutants is more complicated due to their mixture effects. This study developed a novel, rapid and interference-resistant detection method for water toxicity based on an electrochemical biosensor using peak current from nitrite oxidation as a signal. Toxicants could weaken the characteristic peak current of nitrite to indicate the magnitude of toxicity. The proof-of-concept study was first conducted using a synthetic water sample containing trichloroacetic acid (TCAA), and then the results were compared with those of the traditional toxicity colorimetric method (CCK-8 kit) and laser confocal microscopy (CLSM). The accuracy of the biosensor was further verified with water samples containing individual pollutants such as Cd²⁺ (50-150 μg/L), Cr⁶⁺ (20-80 μg/L) mixture, triclosan (TCS; 0.1-1.0 μg/L) and TCAA (10-80 μg/L), or a mixture of the above. The viability of the sensor was further validated with the actual water sample from the Tuojiang River. The results demonstrated that although the concentration of a single conventional pollutant in water did not exceed the discharge standard for surface water, the comprehensive toxicity of natural water should not be ignored. This method could be a beneficial supplement to conventional water quality detection to understand the characteristics of the water, and thus contribute to the next stage of water treatment.

Design, optimization and application of a highly sensitive microbial electrolytic cell-based BOD biosensor

Biochemical oxygen demand (BOD) is an important biochemical indicator for determining the degree of water pollution and guiding the design of wastewater treatment processes. BOD sensors based on microbial electrochemical technology can conduct real-time online monitoring of organic matter and have attracted extensive attention. However, research on microbial electrolytic cell (MEC)-type BOD sensors is at the stage of theoretical exploration. Here, we designed and optimized a highly sensitive MEC-type BOD sensor by screening inoculants, comparing electrode materials, and optimizing the reactor configuration. The results showed that effective means to optimize a BOD sensor for fast activation and sensitive testing included the inoculation of the MEC reactor effluent with large amounts of biomass and highly active bacteria, selection of carbon felt electrodes with excellent adsorption and permeability, miniaturization of the reactor, regulation of suitable electrode spacing, and design of the penetrating fluid structure. Then, the optimized sensing system was applied to determine the BOD concentration in model solutions of sodium acetate in a laboratory environment, where it accurately measured BOD concentrations in the range of 10-500 mg/L and maintained good parallelism during long-term operation. Next, the MEC-type BOD sensors were put into practice in the field as an alarm for accidents at an actual sewage plant. The whole BOD sensing system was quickly assembled on site and started up, and it gave an early warning shortly after the concentration of organic matter in the water suddenly increased, thus showing a high potential for engineering applications. This study broadened the domains of application of MEC-type BOD sensors in environmental monitoring, and promoted the development of technological innovation in water ecology and environmental monitoring.

Transcriptomic Analysis Reveals the Role of tmRNA on Biofilm Formation in Bacillus subtilis

Bacillus strains are widely distributed in terrestrial and marine environments, and some of them are used as biocontrol organisms for their biofilm-formation ability. In Bacillus subtilis, biofilm formation is fine-tuned by a complex network, a clear understanding of which still requires study. In bacteria, tmRNA, encoded by the ssrA gene, catalyzes trans-translation that can rescue ribosomes stalled on mRNA transcripts lacking a functional stop codon. tmRNA also affects physiological bioprocesses in some bacteria. In this study, we constructed a ssrA mutant in B. subtilis and found that the biofilm formation in the ssrA mutant was largely impaired. Moreover, we isolated a biofilm-formation suppressor of ssrA, in which the biofilm formation was restored to a level even stronger than that in the wild type. We further performed RNAseq assays with the wild type, ssrA mutant, and suppressor of ssrA for comparisons of their transcriptomes. By analyzing the transcriptomic data, we predicted the possible functions of some differentially expressed genes (DEGs) in the tmRNA regulation of biofilm formation in B. subtilis. Finally, we found that the overexpression of two DEGs, acoA and yhjR, could restore the biofilm formation in the ssrA mutant, indicating that AcoA and YhjR were immediate regulators involved in the tmRNA regulatory web controlling biofilm formation in B. subtilis. Our data can improve the knowledge about the molecular network involved in Bacillus biofilm formation and provide new targets for manipulation of Bacillus biofilms for future investigation.

Opportunities for visual techniques to determine characteristics and limitations of electro-active biofilms

Optimization of bio-electrochemical systems (BESs) relies on a better understanding of electro-active biofilms (EABfs). These microbial communities are studied with a range of techniques, including electrochemical, visual and chemical techniques. Even though each of these techniques provides very valuable and wide-ranging information about EABfs, such as performance, morphology and biofilm composition, they are often destructive. Therefore, the information obtained from EABfs development and characterization studies are limited to a single characterization of EABfs and often limited to one time point that determines the end of the experiment. Despite being scarcer and not as commonly reported as destructive techniques, non-destructive visual techniques can be used to supplement EABfs characterization by adding in-situ information of EABfs functioning and its development throughout time. This opens the door to EABfs monitoring studies that can complement the information obtained with destructive techniques. In this review, we provide an overview of visual techniques and discuss the opportunities for combination with the established electrochemical techniques to study EABfs. By providing an overview of suitable visual techniques and discussing practical examples of combination of visual with electrochemical methods, this review aims at serving as a source of inspiration for future studies in the field of BESs.

A high-sensitive and durable electrochemical sensor based on Geobacter-dominated biofilms for heavy metal toxicity detection

A highly sensitive electrochemical sensor for detecting low concentrations of heavy metals (Cd²⁺, Ni²⁺, Pb²⁺ and Cu²⁺) based on Geobacter-dominated biofilms was developed. The biosensor showed a high sensitivity for the determination of Cd²⁺ (109.7 μAμM^-1cm^-2) and the determination of Pb²⁺ (161.7 μAμM^-1cm^-2). The performance of three fitting models for biosensor response to heavy metal toxicity was investigated based on the relationship between total coulomb yield and heavy metal concentration. The full-area model (Equation a) provided the best fit, and the response times tended to be the fastest based on the peak current model (Equation c). Recovery methods were proposed to ensure the electrical activity of the biofilm for long-term monitoring. 16S rRNA gene sequence analysis showed that the most dominant genus in the anodic biofilm was Geobacter (44.1%-45.8%), indicating a stable community structure after continuous toxicity shock for 22 days. The confocal laser scanning microscope (CLSM) further proved the restorable and reusability of the biosensor. Thanks to the thin and electrically active Geobacter-dominated biofilms, it could be a good alternative biosensor for groundwater analysis etc. The results of this study contribute to the development of a highly sensitive and accurate biosensor with long-term usage towards on-site monitoring of heavy metals at low concentrations, improving the test performance of the biosensor for practical application.

Recent advancements in microbial fuel cells: A review on its electron transfer mechanisms, microbial community, types of substrates and design for bio-electrochemical treatment

The development in urbanization, growth in industrialization and deficiency in crude oil wealth has made to focus more for the renewable and also sustainable spotless energy resources. In the past two decades, the concepts of microbial fuel cell have caught more considerations among the scientific societies for the probability of converting, organic waste materials into bio-energy using microorganisms catalyzed anode, and enzymatic/microbial/abiotic/biotic cathode electro-chemical reactions. The added benefit with MFCs technology for waste water treatment is numerous bio-centered processes are available such as sulfate removal, denitrification, nitrification, removal of chemical oxygen demand and biological oxygen demand and heavy metals removal can be performed in the same MFC designed systems. The various factors intricate in MFC concepts in the direction of bioenergy production consists of maximum coulombic efficiency, power density and also the rate of removal of chemical oxygen demand which calculates the efficacy of the MFC unit. Even though the efficacy of MFCs in bioenergy production was initially quietly low, therefore to overcome these issues few modifications are incorporated in design and components of the MFC units, thereby functioning of the MFC unit have improvised the rate of bioenergy production to a substantial level by this means empowering application of MFC technology in numerous sectors including carbon capture, bio-hydrogen production, bioremediation, biosensors, desalination, and wastewater treatment. The present article reviews about the microbial community, types of substrates and information about the several designs of MFCs in an endeavor to get the better of practical difficulties of the MFC technology.

Microbial survival and growth on non-corrodible conductive materials

Biofilms growing aerobically on conductive substrates are often correlated with a positive, sustained shift in their redox potential. This phenomenon has a beneficial impact on microbial fuel cells by increasing their overall power output but can be detrimental when occurring on stainless steel by enhancing corrosion. The biological mechanism behind this potential shift is unresolved and a metabolic benefit to cells has not been demonstrated. Here, biofilms containing the electroautotroph 'Candidatus Tenderia electrophaga' catalysed a shift in the open circuit potential of graphite and indium tin oxide electrodes by >100 mV. Biofilms on open circuit electrodes had increased biomass and a significantly higher proportion of 'Ca. Tenderia electrophaga' compared to those on plain glass. Addition of metabolic inhibitors showed that living cells were required to maintain the more positive potential. We propose a model to describe these observations, in which 'Ca. Tenderia electrophaga' drives the shift in open circuit potential through electron uptake for oxygen reduction and CO₂ fixation. We further propose that the electrode is continuously recharged by oxidation of trace redox-active molecules in the medium at the more positive potential. A similar phenomenon is possible on natural conductive substrates in the environment.

Probing Antimicrobial Halloysite/Biopolymer Composites with Electron Microscopy: Advantages and Limitations

Halloysite is a tubular clay nanomaterial of the kaolin group with a characteristic feature of oppositely charged outer and inner surfaces, allowing its selective spatial modification. The natural origin and specific properties of halloysite make it a potent material for inclusion in biopolymer composites with polysaccharides, nucleic acids and proteins. The applications of halloysite/biopolymer composites range from drug delivery and tissue engineering to food packaging and the creation of stable enzyme-based catalysts. Another important application field for the halloysite complexes with biopolymers is surface coatings resistant to formation of microbial biofilms (elaborated communities of various microorganisms attached to biotic or abiotic surfaces and embedded in an extracellular polymeric matrix). Within biofilms, the microorganisms are protected from the action of antibiotics, engendering the problem of hard-to-treat recurrent infectious diseases. The clay/biopolymer composites can be characterized by a number of methods, including dynamic light scattering, thermo gravimetric analysis, Fourier-transform infrared spectroscopy as well as a range of microscopic techniques. However, most of the above methods provide general information about a bulk sample. In contrast, the combination of electron microscopy with energy-dispersive X-ray spectroscopy allows assessment of the appearance and composition of biopolymeric coatings on individual nanotubes or the distribution of the nanotubes in biopolymeric matrices. In this review, recent contributions of electron microscopy to the studies of halloysite/biopolymer composites are reviewed along with the challenges and perspectives in the field.

Dynamic and mechanical evolution of an oil-water interface during bacterial biofilm formation

We present an experimental study combining particle tracking, active microrheology, and differential dynamic microscopy (DDM) to investigate the dynamics and rheology of an oil-water interface during biofilm formation by the bacteria Pseudomonas Aeruginosa PA14. The interface transitions from an active fluid dominated by the swimming motion of adsorbed bacteria at early age to an active viscoelastic system at late ages when the biofilm is established. The microrheology measurements using microscale magnetic rods indicate that the biofilm behaves as a viscoelastic solid at late age. The bacteria motility at the interface during the biofilm formation, which is characterized in the DDM measurements, evolves from diffusive motion at early age to constrained, quasi-localized motion at later age. Similarly, the mobility of passively moving colloidal spheres at the interface decreases significantly with increasing interface age and shows a dependence on sphere size after biofilm formation that is orders-of-magnitude larger than that expected in a homogeneous system in equilibrium. We attribute this anomalous size dependence to either length-scale-dependent rheology of the biofilm or widely differing effects of the bacteria activity on the motion of spheres of different sizes.

Recent advances in soil microbial fuel cells for soil contaminants remediation

The cost-effective and eco-friendly approaches are needed for decontamination of polluted soils. The bio-electrochemical system, especially microbial fuel cells (MFCs) offer great promise as a technology for remediation of soil, sediment, sludge and wastewater. Recently, soil MFCs (SMFCs) have been attracting increasing amounts of interest in environmental remediation, since they are capable of providing a clean and inexhaustible source of electron donors or acceptors and can be easily controlled by adjusting the electrochemical parameters. In this review, we comprehensively covered the principle of SMFCs including the mechanisms of electron releasing and electron transportation, summarized the applications for soil contaminants remediation by SMFCs with highlights on organic contaminants degradation and heavy metal ions removal. In addition, the main factors that affected the performance of SMFCs were discussed in details which would be helpful for performance optimization of SMFCs as well as the efficiency improvement for soil remediation. Moreover, the key issues need to be addressed and future perspectives are presented.

Microbial Electrochemical Systems: Principles, Construction and Biosensing Applications

Microbial electrochemical systems are a fast emerging technology that use microorganisms to harvest the chemical energy from bioorganic materials to produce electrical power. Due to their flexibility and the wide variety of materials that can be used as a source, these devices show promise for applications in many fields including energy, environment and sensing. Microbial electrochemical systems rely on the integration of microbial cells, bioelectrochemistry, material science and electrochemical technologies to achieve effective conversion of the chemical energy stored in organic materials into electrical power. Therefore, the interaction between microorganisms and electrodes and their operation at physiological important potentials are critical for their development. This article provides an overview of the principles and applications of microbial electrochemical systems, their development status and potential for implementation in the biosensing field. It also provides a discussion of the recent developments in the selection of electrode materials to improve electron transfer using nanomaterials along with challenges for achieving practical implementation, and examples of applications in the biosensing field.

Sulphonated polyhedral oligomeric silsesquioxane/sulphonated poly ether ether ketone nanocomposite membranes for microbial fuel cell: Insights to the miniatures involved

In this study we demonstrate Sulphonated Polyhedral oligomeric silsesquioxane (S-POSS) incorporated Sulphonated Poly Ether Ether Ketone (SPEEK) as an effective cation exchange membrane (CEM) for improving performance and sustainability in a fabricated tubular Microbial Fuel Cell (MFC). The organic-inorganic caged frame of S-POSS enables several ion conducting channels thereby resulting in better proton conductivity and water uptake in addition to hydroxide ions native in POSS. Among the membranes, SPEEK+ 5 wt% S-POSS exhibits a highest maximum performance of 162 ± 1.4 mW m^-2 with the highest IEC of 1.8 ± 0.05 meq g^-1. Microbial community analysis reveals the predominance of several bacterial strains contributing to wide range of mechanisms. Three phyla including Betaproteobacteria, Gammaproteobacteria and Firmicutes showed maximum predominance. In addition to a novel nanocomposite membrane, the present research introduces perceptions of two metabolic mechanisms of the microbial community available which opens pathway for future insights on how other miniatures involve in electron transfer mechanisms.

Electron Storage in Electroactive Biofilms

Microbial electrochemical technologies (METs) are promising for sustainable applications. Recently, electron storage during intermittent operation of electroactive biofilms (EABs) has been shown to play an important role in power output and electron efficiencies. Insights into electron storage mechanisms, and the conditions under which these occur, are essential to improve microbial electrochemical conversions and to optimize biotechnological processes. Here, we discuss the two main mechanisms for electron storage in EABs: storage in the form of reduced redox active components in the electron transport chain and in the form of polymers. We review electron storage in EABs and in other microorganisms and will discuss how the mechanisms of electron storage can be influenced.

Microbial Electrochemical Technologies for Wastewater Treatment: Principles and Evolution from Microbial Fuel Cells to Bioelectrochemical-Based Constructed Wetlands

Microbial electrochemical technologies (MET) rely on the presence of the metabolic activity of electroactive bacteria for the use of solid-state electrodes for oxidizing different kinds of compound that can lead to the synthesis of chemicals, bioremediation of polluted matrices, the treatment of contaminants of interest, as well as the recovery of energy. Keeping these possibilities in mind, there has been growing interest in the use of electrochemical technologies for wastewater treatment, if possible with simultaneous power generation, since the beginning of the present century. In the last few years, there has been growing interest in exploring the possibility of merging MET with constructed wetlands offering a new option of an intensified wetland system that could maintain a high performance with a lower footprint. Based on that interest, this paper explains the general principles of MET, and the different known extracellular electron transfer mechanisms ruling the interaction between electroactive bacteria and potential solid-state electron acceptors. It also looks at the adoption of those principles for the development of MET set-ups for simultaneous wastewater treatment and power generation, and the challenges that the technology faces. Ultimately, the most recent developments in setups that merge MET with constructed wetlands are presented and discussed.

Recent progress of metal-graphene nanostructures in photocatalysis

Metal-graphene nanostructures (NSs) as photocatalysts, prepared using simple and scalable synthesis methods, are gaining heightened attention as novel materials for water treatment and environmental remediation applications. Graphene, the unique few layers sheet-like arrangement of sp2 hybridized carbon atoms, has an inimitable two-dimensional (2D) structure. The material is highly conductive, has high electron mobility and an extremely high surface area, and can be produced on a large scale at low cost. Accordingly, it has been considered as an essential base component for producing various metal-based NSs. In particular, metal-graphene NSs as photocatalysts have attracted considerable attention because of their special surface plasmon resonance (SPR) effect that can improve their performance for the removal of toxic dyes and other pollutants. This review summarizes the recent and advanced progress for the easy fabrication and design of graphene-based NSs as photocatalysts, as a novel tool, using a range of approaches, including green and biogenic approaches.

Current status of water environment and their microbial biosensor techniques - Part II: Recent trends in microbial biosensor development

In Part I of the present review series, I presented the current state of the water environment by focusing on Japanese cases and discussed the need to further develop microbial biosensor technologies for the actual water environment. I comprehensively present trends after approximately 2010 in microbial biosensor development for the water environment. In the first section, after briefly summarizing historical studies, recent studies on microbial biosensor principles are introduced. In the second section, recent application studies for the water environment are also introduced. Finally, I conclude the present review series by describing the need to further develop microbial biosensor technologies. Graphical abstract Current water pollution indirectly occurs by anthropogenic eutrophication (Part I). Recent trends in microbial biosensor development for water environment are described in part II of the present review series.

Architecture and physicochemical characterization of Bacillus biofilm as a potential enzyme immobilization factory

Biocatalysis for industrial application is based on the use of enzymes to perform complex transformations. However, these systems have some disadvantage related to the costs of the biocatalyst. In this work, an alternative strategy for producing green immobilized biocatalysts based on biofilm was developed.A study of the rheological behavior of the biofilm from Bacillus sp. Mcn4, as well as the determination of its composition, was carried out. The dynamic rheological measurements, viscosity (G") and elasticity (G') module, showed that the biofilm presents appreciable elastic components, which is a recognized property for enzymes immobilization. After the partial purification, the exopolysaccharidewas identified as a levan with a non-Newtonian behavior. Extracellular DNA with fragments between 10,000 and 1000bp was detected also in the biofilm, and amyloid protein in the extracellular matrix using a fluorescence technique was identified. Bacillus sp. Mcn4 biofilms were developed on different surfaces, being the most stable those developed on hydrophilic supports. The biofilm showed lipase activity suggesting the presence of constitutive lipases entrapped into the biofilm. Indeed, two enzymes with lipase activity were identified in native PAGE. These were used as biocatalysts, whose reuse showed a residual lipase activity after more than one cycle of catalysis. The components identified in the biofilm could be the main contributors of the rheological characteristic of this material, giving an exceptional environment to the lipase enzyme. Based on these findings, the current study proposes green and natural biopolymers matrix as support for the enzyme immobilization for industrial applications.

Electroactive Biofilms for Sensing: Reflections and Perspectives

Microbial electrochemistry has from the onset been recognized for its sensing potential due to the microbial ability to enhance signals through metabolic cascades, its relative selectivity toward substrates, and the higher stability conferred by the microbial ability to self-replicate. The greatest challenge has been to achieve stable and efficient transduction between a microorganism and an electrode surface. Over the past decades, a new kind of microbial architecture has been observed to spontaneously develop on polarized electrodes: the electroactive biofilm (EAB). The EAB conducts electrons over long distances and performs quasi-reversible electron transfer on conventional electrode surfaces. It also possesses self-regenerative properties. In only a few years, EABs have inspired considerable research interest for use as biosensors for environmental or bioprocess monitoring. Multiple challenges still need to be overcome before implementation at larger scale of this new kind of biosensors can be realized. This perspective first introduces the specific characteristics of the EAB with respect to other electrochemical biosensors. It summarizes the sensing applications currently proposed for EABs, stresses their limitations, and suggests strategies toward potential solutions. Conceptual prospects to engineer EABs for sensing purposes are also discussed.

Microbial fuel cells: From fundamentals to applications. A review

In the past 10-15 years, the microbial fuel cell (MFC) technology has captured the attention of the scientific community for the possibility of transforming organic waste directly into electricity through microbially catalyzed anodic, and microbial/enzymatic/abiotic cathodic electrochemical reactions. In this review, several aspects of the technology are considered. Firstly, a brief history of abiotic to biological fuel cells and subsequently, microbial fuel cells is presented. Secondly, the development of the concept of microbial fuel cell into a wider range of derivative technologies, called bioelectrochemical systems, is described introducing briefly microbial electrolysis cells, microbial desalination cells and microbial electrosynthesis cells. The focus is then shifted to electroactive biofilms and electron transfer mechanisms involved with solid electrodes. Carbonaceous and metallic anode materials are then introduced, followed by an explanation of the electro catalysis of the oxygen reduction reaction and its behavior in neutral media, from recent studies. Cathode catalysts based on carbonaceous, platinum-group metal and platinum-group-metal-free materials are presented, along with membrane materials with a view to future directions. Finally, microbial fuel cell practical implementation, through the utilization of energy output for practical applications, is described.

The Planktonic Relationship Between Fluid-Like Electrodes and Bacteria: Wiring in Motion

We have explored a new concept in bacteria-electrode interaction based on the use of fluid-like electrodes and planktonic living cells. We show for the first time that living in a biofilm is not a strict requirement for Geobacter sulfurreducens to exchange electrons with an electrode. The growth of planktonic electroactive G. sulfurreducens could be supported by a fluid-like anode as soluble electron acceptors and with electron transfer rates similar to those reported for electroactive biofilms. This growth was maintained by uncoupling the charge (catabolism) and discharge (extracellular respiration) processes of the cells. Our results reveal a novel method to culture electroactive bacteria in which every single cell in the medium could be instantaneously wired to a fluid-like electrode. Direct extracellular electron transfer is occurring but with a new paradigm behind the bacteria-electrode interaction.

Structure and Dynamics of a Model Polymer Mixture Mimicking a Levan-Based Bacterial Biofilm of Bacillus subtilis

In this paper, we report on the structure and dynamics of biologically important model polymer mixtures that mimic the extracellular polymeric matrix in native biofilm of Bacillus subtilis. This biofilm is rich in nonionic polysaccharide levan, but also contains other biopolymers such as DNA and proteins in small concentrations. Aiming to identify the contribution of each component to the formation of the biofilm, our investigations encompassed dynamic rheology, small-angle X-ray scattering, dynamic light scattering, microscopy, densitometry, and sound velocity measurements. As it turned out, this very powerful combination of techniques is able to provide solid results on the dynamical and structural aspects of the microbiologically and chemically complex biofilm formations. Macroscopic rheological measurements revealed that the addition of DNA to levan solution increased the viscosity, pseudoplasticity, and elasticity of the system. The addition of protein contributed similarly, but also increased the rigidity of the system. This confirms that the presence of minor biofilm components is essential for biofilm formation. DNA and proteins appear to confine levan molecules within their supramolecular structure and, in this way, restrict the role of levan to merely a filling agent. These findings were complemented by small-angle X-ray scattering data, which provided insight into the structure on a molecular scale. One of the essential goals of this work was to compare the structural properties of the native biofilm and synthetic biofilm mixture.

Office paper platform for bioelectrochromic detection of electrochemically active bacteria using tungsten trioxide nanoprobes

Electrochemically active bacteria (EAB) have the capability to transfer electrons to cell exterior, a feature that is currently explored for important applications in bioremediation and biotechnology fields. However, the number of isolated and characterized EAB species is still very limited regarding their abundance in nature. Colorimetric detection has emerged recently as an attractive mean for fast identification and characterization of analytes based on the use of electrochromic materials. In this work, WO3 nanoparticles were synthesized by microwave assisted hydrothermal synthesis and used to impregnate non-treated regular office paper substrates. This allowed the production of a paper-based colorimetric sensor able to detect EAB in a simple, rapid, reliable, inexpensive and eco-friendly method. The developed platform was then tested with Geobacter sulfurreducens, as a proof of concept. G. sulfurreducens cells were detected at latent phase with an RGB ratio of 1.10 ± 0.04, and a response time of two hours.

Tetrazolium reduction allows assessment of biofilm formation by Campylobacter jejuni in a food matrix model

AIMS

To develop a staining method for specific detection of metabolically active (viable) cells in biofilms of the foodborne pathogen Campylobacter jejuni.

METHODS AND RESULTS

Conversion of 2,3,5 triphenyltetrazolium chloride (TTC) to insoluble, red 1,3,5-triphenylformazan (TPF) was dependent on metabolic activity of Camp. jejuni. When used with chicken juice, TTC staining allowed quantification of Camp. jejuni biofilm levels, whereas the commonly used dye, crystal violet, gave high levels of nonspecific staining of food matrix components (chicken juice). The assay was optimized to allow for monitoring of biofilm levels and adapted to monitor levels of Camp. jejuni in broth media.

CONCLUSIONS

Staining with TTC allows for the quantification of metabolically active Camp. jejuni and thus allows for quantification of viable cells in biofilms and food matrices. The TTC staining method can be adapted to quantify bacterial cell concentration in a food matrix model, where the accepted method of A600 measurement is not suitable due to interference by components of the food matrix.

SIGNIFICANCE AND IMPACT OF THE STUDY

2,3,5 Triphenyltetrazolium chloride (TTC) staining is a low-cost technique suitable for use in biofilm analysis, allowing rapid and simple imaging of metabolically active cells and increasing the methods available for biofilm assessment and quantification.

Band gap narrowing of titanium dioxide (TiO2) nanocrystals by electrochemically active biofilms and their visible light activity

We report a simple biogenic-route to narrow the band gap of TiO2 nanocrystals for visible light application by offering a greener method. When an electrochemically active biofilm (EAB) was challenged with a solution of Degussa-TiO2 using sodium acetate as the electron donor, greyish blue-colored TiO2 nanocrystals were obtained. A band gap study showed that the band gap of the modified TiO2 nanocrystals was significantly reduced (E(g) = 2.85 eV) compared to the unmodified white Degussa TiO2 (E(g) = 3.10 eV).

Microbial fuel cells and microbial electrolysis cells for the production of bioelectricity and biomaterials

Today's global energy crisis requires a multifaceted solution. Bioenergy is an important part of the solution. The microbial fuel cell (MFC) technology stands out as an attractive potential technology in bioenergy. MFCs can convert energy stored in organic matter directly into bioelectricity. MFCs can also be operated in the electrolysis mode as microbial electrolysis cells to produce bioproducts such as hydrogen and ethanol. Various wastewaters containing low-grade organic carbons that are otherwise unutilized can be used as feed streams for MFCs. Despite major advances in the past decade, further improvements in MFC power output and cost reduction are needed for MFCs to be practical. This paper analysed MFC operating principles using bioenergetics and bioelectrochemistry. Several major issues were explored to improve the MFC performance. An emphasis was placed on the use of catalytic materials for MFC electrodes. Recent advances in the production of various biomaterials using MFCs were also investigated.

Sticking together: building a biofilm the Bacillus subtilis way

Biofilms are ubiquitous communities of tightly associated bacteria encased in an extracellular matrix. Bacillus subtilis has long served as a robust model organism to examine the molecular mechanisms of biofilm formation, and a number of studies have revealed that this process is regulated by several integrated pathways. In this Review, we focus on the molecular mechanisms that control B. subtilis biofilm assembly, and then briefly summarize the current state of knowledge regarding biofilm disassembly. We also discuss recent progress that has expanded our understanding of B. subtilis biofilm formation on plant roots, which are a natural habitat for this soil bacterium.

DIFFUSION IN BIOFILMS RESPIRING ON ELECTRODES

The goal of this study was to measure spatially and temporally resolved effective diffusion coefficients (D(e)) in biofilms respiring on electrodes. Two model electrochemically active biofilms, Geobacter sulfurreducens PCA and Shewanella oneidensis MR-1, were investigated. A novel nuclear magnetic resonance microimaging perfusion probe capable of simultaneous electrochemical and pulsed-field gradient nuclear magnetic resonance (PFG-NMR) techniques was used. PFG-NMR allowed noninvasive, nondestructive, high spatial resolution in situ D(e) measurements in living biofilms respiring on electrodes. The electrodes were polarized so that they would act as the sole terminal electron acceptor for microbial metabolism. We present our results as both two-dimensional D(e) heat maps and surface-averaged relative effective diffusion coefficient (D(rs)) depth profiles. We found that 1) D(rs) decreases with depth in G. sulfurreducens biofilms, following a sigmoid shape; 2) D(rs) at a given location decreases with G. sulfurreducens biofilm age; 3) average D(e) and D(rs) profiles in G. sulfurreducens biofilms are lower than those in S. oneidensis biofilms-the G. sulfurreducens biofilms studied here were on average 10 times denser than the S. oneidensis biofilms; and 4) halting the respiration of a G. sulfurreducens biofilm decreases the D(e) values. Density, reflected by D(e), plays a major role in the extracellular electron transfer strategies of electrochemically active biofilms.

Enrichment and analysis of anode-respiring bacteria from diverse anaerobic inocula

One of the limitations currently faced by microbial electrochemical cell (MXC) technologies lies in the shortage of different organisms capable of forming a biofilm and channeling electrons from substrates to the anode at high current densities. Using a poised anode (-0.30 V vs Ag/AgCl) and acetate as the electron donor in a MXC, we demonstrated the presence of highly efficient anode-respiring bacteria (ARB) able to produce high current densities (>1.5 A/m(2) anode) in seven out of thirteen environmental samples. These included marshes, lake sediments, saline microbial mats, and anaerobic soils obtained from geographically diverse locations. Our microbial ecology analysis, using pyrosequencing, shows that bacteria related to the genus Geobacter, a known and commonly found ARB, dominate only two of the biofilm communities producing high current; other biofilm communities contained different known and/or novel ARB. The presence of ARB in geographically diverse locations indicates that ARB thrive in a wide range of ecosystems. Studying ARB from different environmental conditions will allow us to better understand the ubiquity of anode respiration, compare the capabilities of different ARB consortia, and find ARB with useful metabolic capacities for future applications.

Tropical mangrove sediments as a natural inoculum for efficient electroactive biofilms

Chronoamperometry is known to be an efficient way to form electroactive biofilms (EAB) on conductive electrodes. For the first time, tropical mangrove sediments are analyzed as a potential inoculum to form MFC anodes with the use of acetate as substrate. The performance of the EAB-coated carbon cloth electrodes are evaluated according to the maximal current density, the coulombic efficiency and the cyclic voltammogramms. Working electrodes (WE) polarized at -0.2V/SCE gave better results compared to -0.4V/SCE and 0.0 V/SCE. The maximal current density attained was 12A/m(2) with a CE of 24%. Contributions of the EAB in the generation of current were discussed and mechanisms of electronic transfer by the bacteria were discussed. Epifluorescence and SEM images showed the evolution of the biofilms on the electrode surface and the heterogeneity of the structure.

Biofilms as living catalysts in continuous chemical syntheses

Biofilms are resilient to a wide variety of environmental stresses. This inherited robustness has been exploited mainly for bioremediation. With a better understanding of their physiology, the application of these living catalysts has been extended to the production of bulk and fine chemicals as well as towards biofuels, biohydrogen, and electricity production in microbial fuel cells. Numerous challenges call for novel solutions and concepts of analytics, biofilm reactor design, product recovery, and scale-up strategies. In this review, we highlight recent advancements in spatiotemporal biofilm characterization and new biofilm reactor developments for the production of value-added fine chemicals as well as current challenges and future scenarios.

Graphene/carbon cloth anode for high-performance mediatorless microbial fuel cells

Graphene was electrochemically deposited on carbon cloth to fabricate an anode for a Pseudomonas aeruginosa mediatorless microbial fuel cell (MFC). The graphene modification improved power density and energy conversion efficiency by 2.7 and 3 times, respectively. The improvement is attributed to the high biocompatibility of graphene which promotes bacteria growth on the electrode surface that results in the creation of more direct electron transfer activation centers and stimulates excretion of mediating molecules for higher electron transfer rate. A parallel bioelectrocatalytic mechanism consisting of simultaneous direct electron transfer and cell-excreted mediator-enabled electron transfer was established in the P. aeruginosa-catalyzed MFC. This study does not only offer fundamental insights into MFC reactions, but also suggests a low cost manufacturing process to fabricate high power MFCs for practical applications.