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Kwan V, Consta S, Malek SMA. Variation of Surface Propensity of Halides with Droplet Size and Temperature: The Planar Interface Limit. J Phys Chem B 2024; 128:193-207. [PMID: 38127582 DOI: 10.1021/acs.jpcb.3c05701] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2023]
Abstract
The radial number density profiles of halide and alkali ions in aqueous clusters with equimolar radius ≲1.4 nm, which correspond to ≲255 H2O molecules, have been extensively studied by computations. However, the surface abundance of Cl-, Br-, and I- relative to the bulk interior in these smaller clusters may not be representative of the larger systems. Indeed, here we show that the larger the cluster is, the lower the relative surface abundance of chaotropic halides is. In droplets with an equimolar radius of ≈2.45 nm, which corresponds to ≈2000 H2O molecules, the polarizable halides show a clear number density maximum in the droplet's bulk-like interior. A similar pattern is observed in simulations of the aqueous planar interface with halide salts at room temperature. At elevated temperature the surface propensity of Cl- decreases gradually, while that of I- is partially preserved. The change in the chaotropic halide location at higher temperatures than the room temperature may considerably affect photochemical reactivity in atmospheric aerosols, vapor-liquid nucleation and growth mechanisms, and salt crystallization via solvent evaporation. We argue that the commonly used approach of nullifying parameters in a force field in order to find the factors that determine the ion location does not provide transferable insight into other force fields.
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Affiliation(s)
- Victor Kwan
- Department of Chemistry, The University of Western Ontario, London, ON, Canada N6A 5B7
| | - Styliani Consta
- Department of Chemistry, The University of Western Ontario, London, ON, Canada N6A 5B7
| | - Shahrazad M A Malek
- Department of Physics and Physical Oceanography, Memorial University of Newfoundland, St. John's, NL, Canada A1B 3X7
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2
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Kwan V, Ballaney P, Consta S. Limitations of Atomistic Molecular Dynamics to Reveal Ejection of Proteins from Charged Nanodroplets. J Phys Chem B 2023. [PMID: 37216215 DOI: 10.1021/acs.jpcb.3c01313] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Atomistic molecular dynamics (MD) is frequently used to unravel the mechanisms of macroion release from electrosprayed droplets. However, atomistic MD is currently feasible for only the smallest window of droplet sizes appearing at the end steps of a droplet's lifetime. The relevance of the observations made to the actual droplet evolution, which is much longer than the simulated sizes, has not been addressed yet in the literature. Here, we perform a systematic study of the desolvation mechanisms of poly(ethylene glycol) (PEG), protonated peptides of different compositions, and proteins, to (a) obtain insight into the charging mechanism of macromolecules in larger droplets than those that are currently amenable to atomistic MD and (b) examine whether currently used atomistic MD modeling can establish the extrusion mechanism of proteins from droplets. To mimic larger droplets that are not amenable to MD modeling, we scale down the systems, by simulating a large droplet size relative to the macromolecule. MD of PEG charging reveals that, above a critical droplet size, ions are available near the backbone of the macromolecule, but charging occurs only transiently by transfer of ions from the solvent to the macroion, while below the critical size, the capture of the ion from PEG has a lifetime sufficiently long for the extrusion of a charged PEG from the aqueous droplet. This is the first report of the role of droplet curvature in the relation between macroion conformation and charging. Simulations of protonated peptides with a high degree of hydrophobicity show that partial extrusion of a peptide from the droplet surface is rare relative to desolvation by drying-out. Different from what has been presented in the literature, we argue that atomistic MD simulations have not sufficiently established the extrusion mechanism of proteins from droplets and their charging mechanism. We also argue that release of highly charged proteins can occur at an earlier stage of a droplet's lifetime than predicted by atomistic MD. In this earlier stage, we emphasize the key role of jets emanating from a droplet at the point of charge-induced instability in the release of proteins.
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Affiliation(s)
- Victor Kwan
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
| | - Pranav Ballaney
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
| | - Styliani Consta
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
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3
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Consta S. Atomistic Modeling of Jet Formation in Charged Droplets. J Phys Chem B 2022; 126:8350-8357. [PMID: 36201739 DOI: 10.1021/acs.jpcb.2c05849] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The first atomistic simulations that reveal the mechanism of Rayleigh fission are presented. It is demonstrated that simple ion or macroion ejection takes place through droplet deformation from a spherical into a distinct "tear" shape that contains a conical protrusion. We assert that the latter state is a free-energy minimum along an order parameter that measures the degree of droplet asphericity. The charged droplet's long-time evolution proceeds by alternating between the two minima above and below the critical value that are reached through solvent evaporation and ion ejection, respectively. For the first time, this mechanism allows one to explain the nature of the progeny droplets and the percentage of charge lost during fission. The cone half angle is estimated and found to be in good agreement with the value predicted from the solution of the electrostatic equation for the dielectric liquid. It is found that the conical deformation is independent of the effect of electrohydrodynamic forces reported in experiments. Contrary to the experimental observations of two diametrically opposite jets for droplets suspended in the electric field, we find that a single jet is formed at the Rayleigh limit. The study provides insight into the mechanism of capture of a macroion in jets appearing in electrospray ionization mass spectrometry (ESI-MS) experiments and may explain the tolerance of the ESI-MS spectrum to salt contamination of the sample.
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Affiliation(s)
- Styliani Consta
- Department of Chemistry, The University of Western Ontario, London, Ontario, CanadaN6A 5B7.,Yusuf Hamied Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EWUnited Kingdom
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Kwan V, Consta S. Conical Shape Fluctuations Determine the Rate of Ion Evaporation and the Emitted Cluster Size Distribution from Multicharged Droplets. J Phys Chem A 2022; 126:3229-3238. [PMID: 35549274 DOI: 10.1021/acs.jpca.2c02056] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The ion evaporation mechanism (IEM) is perceived to be a major pathway for disintegration of multi-ion charged droplets found in atmospheric and sprayed aerosols. However, the precise mechanism of IEM and the effect of the nature of the ions in the emitted cluster size distribution have not yet been established despite its broad use in mass spectrometry and atmospheric chemistry over the past half century. Here, we present a systematic study of the emitted ion cluster distribution in relation to their spatial distribution in the parent droplet using atomistic modeling. It is found that in the parent droplet, multiple kosmotropic and weakly polarizable chaotropic ions (Cs+) are buried deeper within the droplet than polarizable chaotropic ions (Cl-, I-). This differentiation in the ion location is only captured by a polarizable model. It is demonstrated that the emitted cluster size distribution is determined by dynamic conical deformations and not by the equilibrium ion depth within the parent droplet as the IEM models assume. Critical factors that determine the cluster size distribution such as the charge sign asymmetry that have not been considered in models and in experiments are presented. We argue that the existing IEM analytical models do not establish a clear difference between IEM and Rayleigh fission. We propose a shift in the existing view for IEM from the equilibrium properties of the parent droplet to the chemistry in the conical shape fluctuations that serve as the centers for ion emission. Consequently, chemistry in the conical fluctuations may also be a key element to explain charge states of macromolecules in mass spectrometry and may have potential applications in catalysis due to the electric field in the conical region.
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Affiliation(s)
- Victor Kwan
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
| | - Styliani Consta
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
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Malek SMA, Kwan V, Saika-Voivod I, Consta S. Low Density Interior in Supercooled Aqueous Nanodroplets Expels Ions to the Subsurface. J Am Chem Soc 2021; 143:13113-13123. [PMID: 34375522 DOI: 10.1021/jacs.1c04142] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The interaction between water and ions within droplets plays a key role in the chemical reactivity of atmospheric and man-made aerosols. Here we report direct computational evidence that in supercooled aqueous nanodroplets a lower density core of tetrahedrally coordinated water expels the cosmotropic ions to the denser and more disordered subsurface. In contrast, at room temperature, depending on the nature of the ion, the radial distribution in the droplet core is nearly uniform or elevated toward the center. We analyze the spatial distribution of a single ion in terms of a reference electrostatic model. The energy of the system in the analytical model is expressed as the sum of the electrostatic and surface energy of a deformable droplet. The model predicts that the ion is subject to a harmonic potential centered at the droplet's center of mass. We name this effect "electrostatic confinement". The model's predictions are consistent with the simulation findings for a single ion at room temperature but not at supercooling. We anticipate this study to be the starting point for investigating the structure of supercooled (electro)sprayed droplets that are used to preserve the conformations of macromolecules originating from the bulk solution.
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Affiliation(s)
- Shahrazad M A Malek
- Department of Physics and Physical Oceanography, Memorial University of Newfoundland, St. John's A1B 3X7, Canada
| | - Victor Kwan
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
| | - Ivan Saika-Voivod
- Department of Physics and Physical Oceanography, Memorial University of Newfoundland, St. John's A1B 3X7, Canada.,Department of Applied Mathematics, Western University, London, Ontario N6A 3K7, Canada
| | - Styliani Consta
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
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6
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Kwan V, O’Dwyer R, Laur D, Tan J, Consta S. Relation between Ejection Mechanism and Ion Abundance in the Electric Double Layer of Droplets. J Phys Chem A 2021; 125:2954-2966. [DOI: 10.1021/acs.jpca.1c01522] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Victor Kwan
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
| | - Ryan O’Dwyer
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
| | - David Laur
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
| | - Jiahua Tan
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
- College of Chemistry, Nankai University, Tianjin 300071, P. R. China
| | - Styliani Consta
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
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Kwan V, Consta S. Molecular Characterization of the Surface Excess Charge Layer in Droplets. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2021; 32:33-45. [PMID: 32597645 DOI: 10.1021/jasms.0c00053] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
The surface excess charge layer (SECL) in droplets has often been associated with distinct chemistry. We examine the effect of the nature of ions in the composition and structure of SECL by using molecular dynamics. We find that in the presence of simple ions the thickness of SECL is invariant not only with respect to droplet size but also with respect to the nature of the ions. In the presence of simple ions, this layer has a thickness of ∼1.5-1.7 nm but in the presence of macroions it may extend to ∼2.0 nm. The proportion of ions contained in SECL depends on the nature of the ions and the droplet size. For the same droplet size, I- and model H3O+ ions show considerably higher concentration than Na+ and Cl- ions. We identify the maximum ion concentration region, which, in nanodrops, may partially overlap with SECL. As the relative shape fluctuations decrease when microdrop size is approached, the overlap between SECL and maximum ion concentration region increases. We suggest the extension of the bilayer droplet structure assumed in the equilibrium partitioning model of Enke to include the maximum ion concentration region that may not coincide with SECL in nanodrops. We compute the ion concentrations in SECL, which are those that should enter the kinetic equation in the ion-evaporation mechanism, instead of the overall drop ion concentration that has been used.
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Affiliation(s)
- Victor Kwan
- Department of Chemistry, The University of Western Ontario, London, Ontario, Canada N6A 5B7
| | - Styliani Consta
- Department of Chemistry, The University of Western Ontario, London, Ontario, Canada N6A 5B7
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8
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Trimpin S, Marshall DD, Karki S, Madarshahian S, Hoang K, Meher AK, Pophristic M, Richards AL, Lietz CB, Fischer JL, Elia EA, Wang B, Pagnotti VS, Lutomski CA, El-Baba TJ, Lu IC, Wager-Miller J, Mackie K, McEwen CN, Inutan ED. An overview of biological applications and fundamentals of new inlet and vacuum ionization technologies. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2021; 35 Suppl 1:e8829. [PMID: 32402102 DOI: 10.1002/rcm.8829] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2020] [Revised: 05/01/2020] [Accepted: 05/10/2020] [Indexed: 06/11/2023]
Abstract
RATIONALE The developments of new ionization technologies based on processes previously unknown to mass spectrometry (MS) have gained significant momentum. Herein we address the importance of understanding these unique ionization processes, demonstrate the new capabilities currently unmet by other methods, and outline their considerable analytical potential. METHODS The inlet and vacuum ionization methods of solvent-assisted ionization (SAI), matrix-assisted ionization (MAI), and laserspray ionization can be used with commercial and dedicated ion sources producing ions from atmospheric or vacuum conditions for analyses of a variety of materials including drugs, lipids, and proteins introduced from well plates, pipet tips and plate surfaces with and without a laser using solid or solvent matrices. Mass spectrometers from various vendors are employed. RESULTS Results are presented highlighting strengths relative to ionization methods of electrospray ionization (ESI) and matrix-assisted laser desorption/ionization. We demonstrate the utility of multi-ionization platforms encompassing MAI, SAI, and ESI and enabling detection of what otherwise is missed, especially when directly analyzing mixtures. Unmatched robustness is achieved with dedicated vacuum MAI sources with mechanical introduction of the sample to the sub-atmospheric pressure (vacuum MAI). Simplicity and use of a wide array of matrices are attained using a conduit (inlet ionization), preferably heated, with sample introduction from atmospheric pressure. Tissue, whole blood, urine (including mouse, chicken, and human origin), bacteria strains and chemical on-probe reactions are analyzed directly and, especially in the case of vacuum ionization, without concern of carryover or instrument contamination. CONCLUSIONS Examples are provided highlighting the exceptional analytical capabilities associated with the novel ionization processes in MS that reduce operational complexity while increasing speed and robustness, achieving mass spectra with low background for improved sensitivity, suggesting the potential of this simple ionization technology to drive MS into areas currently underserved, such as clinical and medical applications.
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Affiliation(s)
- Sarah Trimpin
- Department of Chemistry, Wayne State University, Detroit, MI, 48202, USA
- MS™, LLC, Newark, DE, 19711, USA
| | - Darrell D Marshall
- Department of Chemistry, Wayne State University, Detroit, MI, 48202, USA
- MS™, LLC, Newark, DE, 19711, USA
| | - Santosh Karki
- Department of Chemistry, Wayne State University, Detroit, MI, 48202, USA
- MS™, LLC, Newark, DE, 19711, USA
| | | | - Khoa Hoang
- MS™, LLC, Newark, DE, 19711, USA
- University of the Sciences, Philadelphia, PA, 19104, USA
| | - Anil K Meher
- Department of Chemistry, Wayne State University, Detroit, MI, 48202, USA
- MS™, LLC, Newark, DE, 19711, USA
| | - Milan Pophristic
- MS™, LLC, Newark, DE, 19711, USA
- University of the Sciences, Philadelphia, PA, 19104, USA
| | - Alicia L Richards
- Department of Chemistry, Wayne State University, Detroit, MI, 48202, USA
| | | | - Joshua L Fischer
- Department of Chemistry, Wayne State University, Detroit, MI, 48202, USA
| | - Efstathios A Elia
- Department of Chemistry, Wayne State University, Detroit, MI, 48202, USA
| | - Beixi Wang
- Department of Chemistry, Wayne State University, Detroit, MI, 48202, USA
| | | | - Corinne A Lutomski
- Department of Chemistry, Wayne State University, Detroit, MI, 48202, USA
| | - Tarick J El-Baba
- Department of Chemistry, Wayne State University, Detroit, MI, 48202, USA
| | - I-Chung Lu
- Department of Chemistry, Wayne State University, Detroit, MI, 48202, USA
| | - James Wager-Miller
- Gill Center for Biomolecular Science and Department of Psychological and Brain Sciences, Indiana University, Bloomington, IN, 47405, USA
| | - Ken Mackie
- Gill Center for Biomolecular Science and Department of Psychological and Brain Sciences, Indiana University, Bloomington, IN, 47405, USA
| | - Charles N McEwen
- MS™, LLC, Newark, DE, 19711, USA
- University of the Sciences, Philadelphia, PA, 19104, USA
| | - Ellen D Inutan
- Department of Chemistry, Wayne State University, Detroit, MI, 48202, USA
- MS™, LLC, Newark, DE, 19711, USA
- Mindanao State University Iligan Institute of Technology, Iligan City, 9200, Philippines
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9
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Bridging electrostatic properties between nanoscopic and microscopic highly charged droplets. Chem Phys Lett 2020. [DOI: 10.1016/j.cplett.2020.137238] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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10
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Zhang J, Bogdanov B, Parkins A, McCallum CM. Observation of Magic Number Clusters from Thermal Dissociation Molecular Dynamics Simulations of Lithium Formate Ionic Clusters. J Phys Chem A 2020; 124:3535-3541. [DOI: 10.1021/acs.jpca.0c01973] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
| | - Bogdan Bogdanov
- Shimadzu Scientific Instruments, Pleasanton, California 94566, United States
| | - Andrew Parkins
- Department of Chemistry, University of the Pacific, Stockton, California 95212, United States
| | - C. Michael McCallum
- Department of Chemistry, University of the Pacific, Stockton, California 95212, United States
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11
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Oh MI, Consta S. General solvation motifs of a charged linear macroion in an aqueous droplet. Mol Phys 2019. [DOI: 10.1080/00268976.2019.1596326] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Affiliation(s)
- Myong In Oh
- Department of Chemistry, The University of Western Ontario, London, Ontario, Canada
| | - Styliani Consta
- Department of Chemistry, The University of Western Ontario, London, Ontario, Canada
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12
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Kwan V, Malevanets A, Consta S. Where Do the Ions Reside in a Highly Charged Droplet? J Phys Chem A 2019; 123:9298-9310. [DOI: 10.1021/acs.jpca.9b03368] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Victor Kwan
- Department of Chemistry, The University of Western Ontario, London N6A 5B7, Ontario, Canada
| | - Anatoly Malevanets
- Department of Electrical and Computer Engineering, The University of Western Ontario, London N6A 5B9, Ontario, Canada
| | - Styliani Consta
- Department of Chemistry, The University of Western Ontario, London N6A 5B7, Ontario, Canada
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13
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Trimpin S. Novel ionization processes for use in mass spectrometry: 'Squeezing' nonvolatile analyte ions from crystals and droplets. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2019; 33 Suppl 3:96-120. [PMID: 30138957 DOI: 10.1002/rcm.8269] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2018] [Revised: 07/29/2018] [Accepted: 08/15/2018] [Indexed: 05/25/2023]
Abstract
Together with my group and collaborators, I have been fortunate to have had a key role in the discovery of new ionization processes that we developed into new flexible, sensitive, rapid, reliable, and robust ionization technologies and methods for use in mass spectrometry (MS). Our current research is focused on how best to understand, improve, and use these novel ionization processes which convert volatile and nonvolatile compounds from solids or liquids into gas-phase ions for analysis by MS using e.g. mass-selected fragmentation and ion mobility spectrometry to provide reproducible, accurate, and improved mass and drift time resolution. In my view, the apex was the discovery of vacuum matrix-assisted ionization (vMAI) in 2012 on an intermediate pressure matrix-assisted laser desorption/ionization (MALDI) source without the use of a laser, high voltages, or any other added energy. Only exposure of the matrix:analyte to the sub-atmospheric pressure of the mass spectrometer was necessary to initiate ionization. These findings were initially rejected by three different scientific journals, with comments related to 'how can this work?', 'where do the charges come from?', and 'it is not analytically useful'. Meanwhile, we and others have demonstrated analytical utility without a complete understanding of the mechanism. In reality, MALDI and electrospray ionization are widely used in science and their mechanisms are still controversially discussed despite use and optimization of now 30 years. This Perspective covers the applications and mechanistic aspects of the novel ionization processes for use in MS that guided us in instrument developments, and provides our perspective on how they relate to traditional ionization processes.
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Affiliation(s)
- Sarah Trimpin
- Department of Chemistry, Wayne State University, Detroit, MI, 48202, USA
- Cardiovascular Research Institute, Wayne State University School of Medicine, Detroit, MI, 48201, USA
- MSTM, LLC, Newark, DE, 19711, USA
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14
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Consta S, In Oh M, Kwan V, Malevanets A. Strengths and Weaknesses of Molecular Simulations of Electrosprayed Droplets. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2018; 29:2287-2296. [PMID: 30259408 DOI: 10.1007/s13361-018-2039-2] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2018] [Revised: 07/05/2018] [Accepted: 07/13/2018] [Indexed: 06/08/2023]
Abstract
The origin and the magnitude of the charge in a macroion are critical questions in mass spectrometry analysis coupled to electrospray and other ionization techniques that transfer analytes from the bulk solution into the gaseous phase via droplets. In many circumstances, it is the later stages of the existence of a macroion in the containing solvent drop before the detection that determines the final charge state. Experimental characterization of small (with linear dimensions of several nanometers) and short-lived droplets is quite challenging. Molecular simulations in principle may provide insight exactly in this challenging for experiments regime. We discuss the strengths and weaknesses of the molecular modeling of electrosprayed droplets using molecular dynamics. We illustrate the limitations of the molecular modeling in the analysis of large macroions and specifically proteins away from their native states. Graphical Abstract ᅟ.
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Affiliation(s)
- Styliani Consta
- Department of Chemistry, The University of Western Ontario, London, Ontario, N6A 5B7, Canada.
| | - Myong In Oh
- Department of Chemistry, The University of Western Ontario, London, Ontario, N6A 5B7, Canada
| | - Victor Kwan
- Department of Chemistry, The University of Western Ontario, London, Ontario, N6A 5B7, Canada
| | - Anatoly Malevanets
- Department of Chemistry, The University of Western Ontario, London, Ontario, N6A 5B7, Canada
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15
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Malevanets A, Oh MI, Sharawy M, Consta S. Landau–Ginzburg theory for ‘star’-shaped droplets. Mol Phys 2018. [DOI: 10.1080/00268976.2018.1513174] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- Anatoly Malevanets
- Department of Electrical and Computer Engineering, The University of Western Ontario, London, Ontario, Canada
| | - Myong In Oh
- Department of Chemistry, The University of Western Ontario, London, Ontario, Canada
| | - Mahmoud Sharawy
- Department of Chemistry, The University of Western Ontario, London, Ontario, Canada
| | - Styliani Consta
- Department of Chemistry, The University of Western Ontario, London, Ontario, Canada
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16
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Consta S, Oh MI, Sharawy M, Malevanets A. Macroion–Solvent Interactions in Charged Droplets. J Phys Chem A 2018; 122:5239-5250. [DOI: 10.1021/acs.jpca.8b01404] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Styliani Consta
- Department of Chemistry, The University of Western Ontario, London, Ontario, Canada N6A 5B7
| | - Myong In Oh
- Department of Chemistry, The University of Western Ontario, London, Ontario, Canada N6A 5B7
| | - Mahmoud Sharawy
- Department of Chemistry, The University of Western Ontario, London, Ontario, Canada N6A 5B7
| | - Anatoly Malevanets
- Department of Electrical and Computer Engineering, The University of University of Western Ontario, London, Ontario, Canada N6A 5B9
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17
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Consta S, Malevanets A, Oh MI, Sharawy M. Role of a reaction coordinate in free energy calculations. MOLECULAR SIMULATION 2018. [DOI: 10.1080/08927022.2018.1445245] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Affiliation(s)
- Styliani Consta
- Department of Chemistry, The University of Western Ontario , London, Canada
| | - Anatoly Malevanets
- Department of Electrical & Computer Engineering, The University of Western Ontario , London, Canada
| | - Myong In Oh
- Department of Chemistry, The University of Western Ontario , London, Canada
| | - Mahmoud Sharawy
- Department of Chemistry, The University of Western Ontario , London, Canada
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18
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Oh MI, Consta S. What factors determine the stability of a weak protein-protein interaction in a charged aqueous droplet? Phys Chem Chem Phys 2018; 19:31965-31981. [PMID: 29177351 DOI: 10.1039/c7cp05043g] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Maintaining the interface of a weak transient protein complex transferred from bulk solution to the gaseous state via evaporating droplets is a critical question in the detection of the complex association (dissociation) constant by using electrospray ionization mass spectrometry (ESI-MS). Here we explore the factors that may affect the stability of a protein-protein interaction (PPI) using atomistic molecular dynamics (MD) modelling of a complex of ubiquitin (Ub) and the ubiquitin-associated domain (UbA) (RCSB PDB code ) and a non-covalent complex of diubiquitin (RCSB PDB code ) in aqueous droplets. A general method is presented to determine the protonation states of the complexes we investigate in particular, and that of a protein in general, under various pH conditions that an evaporating droplet acquires due to its change in size. We find that the combination of high temperature and high charge states of the protein complexes may destabilize the interface by creating new interfaces instead of a direct rupture of the initial stable interface. We provide evidence that highly charged protein complexes are found in droplets that form conical extrusions of the solvent on the surface due to charge-induced instability. This distinct droplet morphology leads to a higher solvent evaporation rate that assists in transferring the complex in the gaseous state without dissociation. The conical solvent protrusions expose on the droplet surface certain amino acids that otherwise would be solvated in a droplet with the protein complex of low charge states. The new vapor-protein interface does not have a direct effect on the stability of the PPI. A common way in experiments to stabilize the protein complexes in droplets is to reduce the protonation state of the proteins. Here we find that weakly bound protein complexes even at high protonation states can be stabilized by the presence of a small number of counterions, without affecting the protonation state of the protein. Our findings may provide guiding principles in ESI-MS experiments to stabilize weak transient PPIs.
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Affiliation(s)
- Myong In Oh
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
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In Oh M, Paliy M, Consta S. “Star” morphologies of charged nanodrops comprised of conformational isomers. J Chem Phys 2018; 148:024307. [DOI: 10.1063/1.5011989] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023] Open
Affiliation(s)
- Myong In Oh
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
| | - Maxim Paliy
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
| | - Styliani Consta
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
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Oh MI, Malevanets A, Paliy M, Frenkel D, Consta S. When droplets become stars: charged dielectric droplets beyond the Rayleigh limit. SOFT MATTER 2017; 13:8781-8795. [PMID: 29139530 DOI: 10.1039/c7sm02017a] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
When a nano-drop comprising a single spherical central ion and dielectric solvent is charged above a well-defined threshold, it acquires a stable star morphology. In contrast, conducting droplets, will undergo fission. Here we report combined atomistic molecular dynamics and continuum modelling study of star formation of droplets that contain a highly charged ion. We assume that in the continuum model the dielectric response is linear. In this linear continuum model, which is an extension of Rayleigh model, the energy of the drop is comprised of terms analogous to those in Rayleigh model, which are surface energy and electrostatic energy of dielectric droplet charged by a central point charge. We present the stability analysis of the continuum model to determine the threshold of instability. Indeed we find that the model accounts well for the onset of the instabilities. Molecular dynamics show that the number of points of the star-shaped nano-drops depends only on the surface tension, dielectric constant and size of the droplet, and on the magnitude of the charge of the central ion, but not on its sign. Intuitively, it is expected that when a spherical dielectric drop becomes unstable it would transform into a non-spherical finite shape of the same volume as the initial spherical shape with the point charge located in the drop interior. To test whether the extended Rayleigh model can account for the observed droplet shapes, we performed numerical simulations of the linear continuum model. Contrary to the expectations, the simulations of the extended Rayleigh model does not reproduce the stable star shapes found in the atomistic simulations, not even when we account for the bending rigidity and spontaneous curvature of the surface. We argue that the assumption that the dielectric response is linear breaks down if the droplet surface approaches the central macro-ion, where the electric field strength is such that dielectric saturation sets in. We envisage that for certain solvents, these stars could be made permanent by cross-linking, opening the way to the production of a novel class of highly-non-convex colloids.
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Affiliation(s)
- Myong In Oh
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, UK.
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Oh MI, Consta S. Charging and Release Mechanisms of Flexible Macromolecules in Droplets. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2017; 28:2262-2279. [PMID: 28801879 DOI: 10.1007/s13361-017-1754-4] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2016] [Revised: 05/28/2017] [Accepted: 05/29/2017] [Indexed: 06/07/2023]
Abstract
We study systematically the charging and release mechanisms of a flexible macromolecule, modeled by poly(ethylene glycol) (PEG), in a droplet by using molecular dynamics simulations. We compare how PEG is solvated and charged by sodium Na+ ions in a droplet of water (H2O), acetonitrile (MeCN), and their mixtures. Initially, we examine the location and the conformation of the macromolecule in a droplet bearing no net charge. It is revealed that the presence of charge carriers do not affect the location of PEG in aqueous and MeCN droplets compared with that in the neutral droplets, but the location of the macromolecule and the droplet size do affect the PEG conformation. PEG is charged on the surface of a sodiated aqueous droplet that is found close to the Rayleigh limit. Its charging is coupled to the extrusion mechanism, where PEG segments leave the droplet once they coordinate a Na+ ion or in a correlated motion with Na+ ions. In contrast, as PEG resides in the interior of a MeCN droplet, it is sodiated inside the droplet. The compact macro-ion transitions through partially unwound states to an extended conformation, a process occurring during the final stage of desolvation and in the presence of only a handful of MeCN molecules. For charged H2O/MeCN droplets, the sodiation of PEG is determined by the H2O component, reflecting its slower evaporation and preference over MeCN for solvating Na+ ions. We use the simulation data to construct an analytical model that suggests that the droplet surface electric field may play a role in the macro-ion-droplet interactions that lead to the extrusion of the macro-ion. This study provides the first evidence of the effect of the surface electric field by using atomistic simulations. Graphical Abstract ᅟ.
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Affiliation(s)
- Myong In Oh
- Department of Chemistry, The University of Western Ontario, London, ON, N6A 5B7, Canada
| | - Styliani Consta
- Department of Chemistry, The University of Western Ontario, London, ON, N6A 5B7, Canada.
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Consta S, Sharawy M, Oh MI, Malevanets A. Advances in Modeling the Stability of Noncovalent Complexes in Charged Droplets with Applications in Electrospray Ionization-MS Experiments. Anal Chem 2017; 89:8192-8202. [DOI: 10.1021/acs.analchem.7b01941] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Styliani Consta
- Department
of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
- Department
of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, United Kingdom
| | - Mahmoud Sharawy
- Department
of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
| | - Myong In Oh
- Department
of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
| | - Anatoly Malevanets
- Department
of Electrical and Computer Engineering, The University of Western Ontario, London, Ontario N6A 5B9, Canada
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Oh MI, Consta S. Stability of a Transient Protein Complex in a Charged Aqueous Droplet with Variable pH. J Phys Chem Lett 2017; 8:80-85. [PMID: 27936321 DOI: 10.1021/acs.jpclett.6b02319] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Electrospray ionization mass spectrometry (ESI-MS) has the potential to become a high-throughput robust experimental method for the detection of protein-protein equilibrium constants. Poorly understood processes that affect the stability of weak noncovalent protein complexes in the intervening droplet environment are a significant factor that precludes the advancement of the method. We use molecular dynamics to study the stability of a ubiquitin and ubiquitin-associated domain complex (RCSB PDB code 2MRO ) in an aqueous droplet with changing size and charge concentration. We present evidence that a weak protein complex changes conformation and may dissociate in shrinking droplets. Then, the droplets containing these dissociated proteins divide. Our findings suggest that in some cases ESI-MS does not measure the correct association constants. The study intends to stimulate research for systematic development of experimental protocols that stabilize weakly bound protein interfaces in droplets.
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Affiliation(s)
- Myong In Oh
- Department of Chemistry, The University of Western Ontario , London, Ontario N6A 5B7, Canada
| | - Styliani Consta
- Department of Chemistry, The University of Western Ontario , London, Ontario N6A 5B7, Canada
- Department of Chemistry, University of Cambridge , Lensfield Road, Cambridge CB2 1EW, United Kingdom
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Affiliation(s)
- Patricia M Peacock
- First State IR, LLC , 118 Susan Drive, Hockessin, Delaware 19707, United States
| | - Wen-Jing Zhang
- Department of Chemistry, Wayne State University , 5101 Cass Avenue, Detroit, Michigan 48202, United States
| | - Sarah Trimpin
- Department of Chemistry, Wayne State University , 5101 Cass Avenue, Detroit, Michigan 48202, United States
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Sharawy M, Consta S. Characterization of "Star" Droplet Morphologies Induced by Charged Macromolecules. J Phys Chem A 2016; 120:8871-8880. [PMID: 27797502 DOI: 10.1021/acs.jpca.6b08486] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
"Star" morphologies of charged liquid droplets are distinct droplet conformations that, for a certain charge squared to volume ratio, have lower energy than their spherically shaped analogues. For these shapes to appear, the charge should be carried by a single ionic species. A typical example of a charge carrier that we employ in this study is a fully charged double-stranded oligodeoxynucleotide (dsDNA) in an aqueous and an acetonitrile droplet. We characterize the structure and dynamics of the star-shaped droplets. We find that by increasing the charge squared to volume ratio, the droplet evolves from spherical to "spiky" shapes, by first passing from droplet sizes that undergo enhanced shape fluctuations relative to those of the larger spherical droplets. These fluctuations mark the onset of the instability. We also find that in the spiky droplet, the orientation of the solvent molecules in the first shell about the dsDNA is very close to that in the bulk solution. However, this orientation is substantially different farther away from the dsDNA. With regards to dynamics, the motion of the spikes is reflected in the autocorrelation functions of rotationally invariant order parameters that show a damped oscillator form of decay, indicative of the elastic motion of the spikes. We compare the formation of spikes with that of the ferrofluids and the dielectric materials in an electric field, and we conclude that they represent a different entity that deserves its own characterization. The study provides insight into the manner in which the charge distribution may give rise to well-controlled droplet morphologies and calls for experiments in this direction.
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Affiliation(s)
- Mahmoud Sharawy
- Department of Chemistry, The University of Western Ontario , London, Ontario Canada N6A 5B7
| | - Styliani Consta
- Department of Chemistry, The University of Western Ontario , London, Ontario Canada N6A 5B7.,Department of Chemistry, University of Cambridge , Lensfield Road, Cambridge, CB2 1EW, United Kingdom
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Miller MA, Bonhommeau DA, Moerland CP, Gray SJ, Gaigeot MP. Dynamics and thermodynamics of decay in charged clusters. Mol Phys 2015. [DOI: 10.1080/00268976.2015.1037805] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
| | - David A. Bonhommeau
- GSMA CNRS UMR7331, UFR Sciences Exactes et Naturelles, Université de Reims Champagne-Ardenne , Reims, France
| | - Christian P. Moerland
- Department of Applied Physics, Technische Universiteit Eindhoven , Eindhoven, The Netherlands
| | - Sarah J. Gray
- Department of Chemistry, Durham University , Durham, UK
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Soltani S, Oh MI, Consta S. Effect of solvent on the charging mechanisms of poly(ethylene glycol) in droplets. J Chem Phys 2015; 142:114307. [DOI: 10.1063/1.4914923] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023] Open
Affiliation(s)
- Sepideh Soltani
- Department of Physics and Astronomy, The University of Western Ontario, London, Ontario N6A 3K7, Canada
| | - Myong In Oh
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
| | - Styliani Consta
- Department of Physics and Astronomy, The University of Western Ontario, London, Ontario N6A 3K7, Canada
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
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Sheriff FA, Consta S. Charge-induced instabilities of droplets containing macromolecular complexes. CAN J CHEM 2015. [DOI: 10.1139/cjc-2014-0299] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Solvated macromolecular complexes are ubiquitous in nature, notably in biological systems containing proteins and nucleic acids. Studies of the interactions within a macromolecular complex and between the complex and the solvent in droplet environments are critical for understanding the stability of macromolecular complexes in electrospray ionization (ESI) and nanofluidic experiments. In this study, two distinct cases of macromolecular complexes in aqueous nanodrops are examined by using molecular dynamics simulations: (i) a pair of sodiated poly(ethylene) glycol (PEG) macroions and (ii) a double-stranded DNA (dsDNA). PEG represents a case in which the surface energy of the aqueous droplet is larger than the solvent–macromolecule energy. Conversely, in a droplet solvating dsDNA, the solvent–macromolecule interaction energy overcomes the solvent interaction energy. We report that charge-induced instabilities previously identified for single macroions also appear in the case of complexes, but with a higher level of complexity. In the case of a pair of PEG macroions, we found that their conformations on the surface of a droplet “sense” each other. The charged PEGs are each released from a droplet at different times through contiguous extrusion or drying-out mechanisms. In the case of the DNA, the charge-induced instability manifests as a spine droplet morphology. Narrow regions of the spines promote break down of the hydrogen bonds that hold the dsDNA together. The dsDNA separates into two single strands as it is increasingly exposed to vacuum. These findings elucidate charge-induced instabilities of macromolecular complexes in droplets, which are critical intermediates in ESI and nanofluidic experiments.
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Affiliation(s)
- Falana Aziza Sheriff
- Department of Biochemistry, The University of Western Ontario, London, ON N6A 5C1, Canada
| | - Styliani Consta
- Department of Chemistry, The University of Western Ontario, London, Ontario, Canada N6A 5B7
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Sharawy M, Consta S. How do non-covalent complexes dissociate in droplets? A case study of the desolvation of dsDNA from a charged aqueous nanodrop. Phys Chem Chem Phys 2015; 17:25550-62. [DOI: 10.1039/c5cp04331j] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
We present the desolvation mechanism of a double-stranded oligodeoxynucleotide (dsDNA) from an aqueous nanodrop studied by using atomistic molecular dynamics methods.
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Affiliation(s)
- Mahmoud Sharawy
- Department of Chemistry
- The University of Western Ontario
- London
- Canada N6A 5B7
| | - Styliani Consta
- Department of Chemistry
- The University of Western Ontario
- London
- Canada N6A 5B7
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