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Krüger J, Richter P, Stoltze J, Strauch SM, Krüger M, Daiker V, Prasad B, Sonnewald S, Reid S, Lebert M. Changes of Gene Expression in Euglena gracilis Obtained During the 29 th DLR Parabolic Flight Campaign. Sci Rep 2019; 9:14260. [PMID: 31582787 PMCID: PMC6776534 DOI: 10.1038/s41598-019-50611-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2019] [Accepted: 09/02/2019] [Indexed: 01/14/2023] Open
Abstract
Parabolic flight maneuvers of Novespace's Airbus A310 ZERO-G produce subsequent phases of hypergravity (about 20 s), microgravity (about 22 s) and another 20 s hypergravity on experiments located in the experiment area of the aircraft. The 29th DLR parabolic flight campaign consisted of four consecutive flight days with thirty-one parabolas each day. Euglena gracilis cells were fixed with TRIzol during different acceleration conditions at the first and the last parabola of each flight. Samples were collected and analyzed with microarrays for one-color gene expression analysis. The data indicate significant changes in gene expression in E. gracilis within short time. Hierarchical clustering shows that changes induced by the different accelerations yield reproducible effects at independent flight days. Transcription differed between the first and last parabolas indicating adaptation effects in the course of the flight. Different gene groups were found to be affected in different phases of the parabolic flight, among others, genes involved in signal transduction, calcium signaling, transport mechanisms, metabolic pathways, and stress-response as well as membrane and cytoskeletal proteins. In addition, transcripts of other areas, e.g., DNA and protein modification, were altered. The study contributes to the understanding of short-term effects of microgravity and different accelerations on cells at a molecular level.
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Affiliation(s)
- Julia Krüger
- Cell Biology Division: Gravitational Biology Group, Department of Biology, Friedrich-Alexander University Erlangen-Nürnberg, Staudtstraße 5, 91058, Erlangen, Germany
| | - Peter Richter
- Cell Biology Division: Gravitational Biology Group, Department of Biology, Friedrich-Alexander University Erlangen-Nürnberg, Staudtstraße 5, 91058, Erlangen, Germany
| | - Julia Stoltze
- Cell Biology Division: Gravitational Biology Group, Department of Biology, Friedrich-Alexander University Erlangen-Nürnberg, Staudtstraße 5, 91058, Erlangen, Germany
| | - Sebastian M Strauch
- Cell Biology Division: Gravitational Biology Group, Department of Biology, Friedrich-Alexander University Erlangen-Nürnberg, Staudtstraße 5, 91058, Erlangen, Germany
- Postgraduate Program in Health and Environment, University of Joinville Region, Rua Paulo Malschitzki, 10 - Zona Industrial Norte, Joinville, SC, CEP 89219-710, Brazil
| | - Marcus Krüger
- Clinic for Plastic, Aesthetic and Hand Surgery, Otto von Guericke University Magdeburg, Leipziger Straße 44, 39120, Magdeburg, Germany
| | - Viktor Daiker
- Cell Biology Division: Gravitational Biology Group, Department of Biology, Friedrich-Alexander University Erlangen-Nürnberg, Staudtstraße 5, 91058, Erlangen, Germany
| | - Binod Prasad
- Cell Biology Division: Gravitational Biology Group, Department of Biology, Friedrich-Alexander University Erlangen-Nürnberg, Staudtstraße 5, 91058, Erlangen, Germany
| | - Sophia Sonnewald
- Biochemistry Division, Department of Biology, Friedrich-Alexander University Erlangen-Nürnberg, Staudtstraße 5, 91058, Erlangen, Germany
| | - Stephen Reid
- Biochemistry Division, Department of Biology, Friedrich-Alexander University Erlangen-Nürnberg, Staudtstraße 5, 91058, Erlangen, Germany
| | - Michael Lebert
- Cell Biology Division: Gravitational Biology Group, Department of Biology, Friedrich-Alexander University Erlangen-Nürnberg, Staudtstraße 5, 91058, Erlangen, Germany.
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Driessche TV. Circadian Rhythms in Three Unicellular Organisms. The Pecularities of the Organisms, the Evidence Brought on Rhythms and their Specific Practical Problems. Outline of Recent Hypotheses. BIOL RHYTHM RES 2008. [DOI: 10.1080/09291019409360309] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Hardeland R. Cosine or non‐sinusoidal fitting as a means of detection of rhythms and determination of period lengths in short biological time series. BIOL RHYTHM RES 2008. [DOI: 10.1080/09291019509360335] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- Rüdiger Hardeland
- a I. Zoologisches Institut , Universität Göttingen , Berliner Str. 28, Göttingen, D‐37073, Germany
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Abstract
The time structure of a biological system is at least as intricate as its spatial structure. Whereas we have detailed information about the latter, our understanding of the former is still rudimentary. As techniques for monitoring intracellular processes continuously in single cells become more refined, it becomes increasingly evident that periodic behaviour abounds in all time domains. Circadian timekeeping dominates in natural environments. Here the free-running period is about 24 h. Circadian rhythms in eukaryotes and prokaryotes allow predictive matching of intracellular states with environmental changes during the daily cycles. Unicellular organisms provide excellent systems for the study of these phenomena, which pervade all higher life forms. Intracellular timekeeping is essential. The presence of a temperature-compensated oscillator provides such a timer. The coupled outputs (epigenetic oscillations) of this ultradian clock constitute a special class of ultradian rhythm. These are undamped and endogenously driven by a device which shows biochemical properties characteristic of transcriptional and translational elements. Energy-yielding processes, protein turnover, motility and the timing of the cell-division cycle processes are all controlled by the ultradian clock. Different periods characterize different species, and this indicates a genetic determinant. Periods range from 30 min to 4 h. Mechanisms of clock control are being elucidated; it is becoming evident that many different control circuits can provide these functions.
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Affiliation(s)
- D Lloyd
- Microbiology Group (PABIO), University of Wales Cardiff, UK
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