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Barry KA, Manzali Y, Flouchi R, Balouki Y, Chelhi K, Elfar M. Exploring the use of association rules in random forest for predicting heart disease. Comput Methods Biomech Biomed Engin 2024; 27:338-346. [PMID: 36877167 DOI: 10.1080/10255842.2023.2185477] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2023] [Revised: 02/07/2023] [Accepted: 02/16/2023] [Indexed: 03/07/2023]
Abstract
Heart disease is one of the most dangerous diseases in the world. People with these diseases, most of them end up losing their lives. Therefore, machine learning algorithms have proven to be useful in this sense to help decision-making and prediction from the large amount of data generated by the healthcare sector. In this work, we have proposed a novel method that allows increasing the performance of the classical random forest technique so that this technique can be used for the prediction of heart disease with its better performance. We used in this study other classifiers such as classical random forest, support vector machine, decision tree, Naïve Bayes, and XGBoost. This work was done in the heart dataset Cleveland. According to the experimental results, the accuracy of the proposed model is better than that of other classifiers with 83.5%.This study contributed to the optimization of the random forest technique as well as gave solid knowledge of the formation of this technique.
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Affiliation(s)
| | | | - Rachid Flouchi
- Laboratory of Microbial Biotechnology and Bioactive Molecules, Science and Technologies Faculty, Sidi Mohamed Ben Abdellah University, Fez, Morocco
| | - Youssef Balouki
- Labo: Mathematics, Computer Science and Engineering Sciences(MISI), Settat, Morocco
| | - Khadija Chelhi
- The logistics center of excellence, Higher School of Textile and Clothing Industries(ESITH Casablanca), Casablanca, Morocco
| | - Mohamed Elfar
- LPAIS Laboratory, Faculty of Sciences, USMBA, Fez, Morocco
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Cai Y, Cai YQ, Tang LY, Wang YH, Gong M, Jing TC, Li HJ, Li-Ling J, Hu W, Yin Z, Gong DX, Zhang GW. Artificial intelligence in the risk prediction models of cardiovascular disease and development of an independent validation screening tool: a systematic review. BMC Med 2024; 22:56. [PMID: 38317226 PMCID: PMC10845808 DOI: 10.1186/s12916-024-03273-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/16/2023] [Accepted: 01/23/2024] [Indexed: 02/07/2024] Open
Abstract
BACKGROUND A comprehensive overview of artificial intelligence (AI) for cardiovascular disease (CVD) prediction and a screening tool of AI models (AI-Ms) for independent external validation are lacking. This systematic review aims to identify, describe, and appraise AI-Ms of CVD prediction in the general and special populations and develop a new independent validation score (IVS) for AI-Ms replicability evaluation. METHODS PubMed, Web of Science, Embase, and IEEE library were searched up to July 2021. Data extraction and analysis were performed for the populations, distribution, predictors, algorithms, etc. The risk of bias was evaluated with the prediction risk of bias assessment tool (PROBAST). Subsequently, we designed IVS for model replicability evaluation with five steps in five items, including transparency of algorithms, performance of models, feasibility of reproduction, risk of reproduction, and clinical implication, respectively. The review is registered in PROSPERO (No. CRD42021271789). RESULTS In 20,887 screened references, 79 articles (82.5% in 2017-2021) were included, which contained 114 datasets (67 in Europe and North America, but 0 in Africa). We identified 486 AI-Ms, of which the majority were in development (n = 380), but none of them had undergone independent external validation. A total of 66 idiographic algorithms were found; however, 36.4% were used only once and only 39.4% over three times. A large number of different predictors (range 5-52,000, median 21) and large-span sample size (range 80-3,660,000, median 4466) were observed. All models were at high risk of bias according to PROBAST, primarily due to the incorrect use of statistical methods. IVS analysis confirmed only 10 models as "recommended"; however, 281 and 187 were "not recommended" and "warning," respectively. CONCLUSION AI has led the digital revolution in the field of CVD prediction, but is still in the early stage of development as the defects of research design, report, and evaluation systems. The IVS we developed may contribute to independent external validation and the development of this field.
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Affiliation(s)
- Yue Cai
- China Medical University, Shenyang, 110122, China
| | - Yu-Qing Cai
- China Medical University, Shenyang, 110122, China
| | - Li-Ying Tang
- China Medical University, Shenyang, 110122, China
| | - Yi-Han Wang
- China Medical University, Shenyang, 110122, China
| | - Mengchun Gong
- Digital Health China Co. Ltd, Beijing, 100089, China
| | - Tian-Ci Jing
- Smart Hospital Management Department, the First Hospital of China Medical University, Shenyang, 110001, China
| | - Hui-Jun Li
- Shenyang Medical & Film Science and Technology Co. Ltd., Shenyang, 110001, China
- Enduring Medicine Smart Innovation Research Institute, Shenyang, 110001, China
| | - Jesse Li-Ling
- Institute of Genetic Medicine, School of Life Science, State Key Laboratory of Biotherapy, Sichuan University, Chengdu, 610065, China
| | - Wei Hu
- Bayi Orthopedic Hospital, Chengdu, 610017, China
| | - Zhihua Yin
- Department of Epidemiology, School of Public Health, China Medical University, Shenyang, 110122, China.
| | - Da-Xin Gong
- Smart Hospital Management Department, the First Hospital of China Medical University, Shenyang, 110001, China.
- The Internet Hospital Branch of the Chinese Research Hospital Association, Beijing, 100006, China.
| | - Guang-Wei Zhang
- Smart Hospital Management Department, the First Hospital of China Medical University, Shenyang, 110001, China.
- The Internet Hospital Branch of the Chinese Research Hospital Association, Beijing, 100006, China.
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Apostolopoulos ID, Papandrianos NI, Papathanasiou ND, Papageorgiou EI. Fuzzy Cognitive Map Applications in Medicine over the Last Two Decades: A Review Study. Bioengineering (Basel) 2024; 11:139. [PMID: 38391626 PMCID: PMC10886348 DOI: 10.3390/bioengineering11020139] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2023] [Revised: 01/18/2024] [Accepted: 01/27/2024] [Indexed: 02/24/2024] Open
Abstract
Fuzzy Cognitive Maps (FCMs) have become an invaluable tool for healthcare providers because they can capture intricate associations among variables and generate precise predictions. FCMs have demonstrated their utility in diverse medical applications, from disease diagnosis to treatment planning and prognosis prediction. Their ability to model complex relationships between symptoms, biomarkers, risk factors, and treatments has enabled healthcare providers to make informed decisions, leading to better patient outcomes. This review article provides a thorough synopsis of using FCMs within the medical domain. A systematic examination of pertinent literature spanning the last two decades forms the basis of this overview, specifically delineating the diverse applications of FCMs in medical realms, including decision-making, diagnosis, prognosis, treatment optimisation, risk assessment, and pharmacovigilance. The limitations inherent in FCMs are also scrutinised, and avenues for potential future research and application are explored.
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Affiliation(s)
| | - Nikolaos I Papandrianos
- Department of Energy Systems, University of Thessaly, Gaiopolis Campus, 41500 Larisa, Greece
| | | | - Elpiniki I Papageorgiou
- Department of Energy Systems, University of Thessaly, Gaiopolis Campus, 41500 Larisa, Greece
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Obot O, John A, Udo I, Attai K, Johnson E, Udoh S, Nwokoro C, Akwaowo C, Dan E, Umoh U, Uzoka FM. Modelling Differential Diagnosis of Febrile Diseases with Fuzzy Cognitive Map. Trop Med Infect Dis 2023; 8:352. [PMID: 37505648 PMCID: PMC10386044 DOI: 10.3390/tropicalmed8070352] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2023] [Revised: 05/26/2023] [Accepted: 06/28/2023] [Indexed: 07/29/2023] Open
Abstract
The report of the World Health Organization (WHO) about the poor accessibility of people living in low-to-middle-income countries to medical facilities and personnel has been a concern to both professionals and nonprofessionals in healthcare. This poor accessibility has led to high morbidity and mortality rates in tropical regions, especially when such a disease presents itself with confusable symptoms that are not easily differentiable by inexperienced doctors, such as those found in febrile diseases. This prompted the development of the fuzzy cognitive map (FCM) model to serve as a decision-support tool for medical health workers in the diagnosis of febrile diseases. With 2465 datasets gathered from four states in the febrile diseases-prone regions in Nigeria with the aid of 60 medical doctors, 10 of those doctors helped in weighting and fuzzifying the symptoms, which were used to generate the FCM model. Results obtained from computations to predict diagnosis results for the 2465 patients, and those diagnosed by the physicians on the field, showed an average of 87% accuracy for the 11 febrile diseases used in the study. The number of comorbidities of diseases with varying degrees of severity for most patients in the study also covary strongly with those found by the physicians in the field.
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Affiliation(s)
- Okure Obot
- Department of Computer Science, University of Uyo, Uyo 520103, Nigeria
| | - Anietie John
- Department of Mathematics and Computer Science, Ritman University, Ikot Ekpene 530101, Nigeria
| | - Iberedem Udo
- Department of Computer Science, University of Uyo, Uyo 520103, Nigeria
| | - Kingsley Attai
- Department of Mathematics and Computer Science, Ritman University, Ikot Ekpene 530101, Nigeria
| | - Ekemini Johnson
- Department of Mathematics and Computer Science, Ritman University, Ikot Ekpene 530101, Nigeria
| | - Samuel Udoh
- Department of Computer Science, University of Uyo, Uyo 520103, Nigeria
| | - Chukwudi Nwokoro
- Department of Computer Science, University of Uyo, Uyo 520103, Nigeria
| | - Christie Akwaowo
- Health Systems Research Hub, University of Uyo Teaching Hospital, Uyo 520103, Nigeria
| | - Emem Dan
- Health Systems Research Hub, University of Uyo Teaching Hospital, Uyo 520103, Nigeria
| | - Uduak Umoh
- Department of Computer Science, University of Uyo, Uyo 520103, Nigeria
| | - Faith-Michael Uzoka
- Department of Mathematics and Computing, Mount Royal University, Calgary, AB T3E 6K6, Canada
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Samaras AD, Moustakidis S, Apostolopoulos ID, Papandrianos N, Papageorgiou E. Classification models for assessing coronary artery disease instances using clinical and biometric data: an explainable man-in-the-loop approach. Sci Rep 2023; 13:6668. [PMID: 37095118 PMCID: PMC10125978 DOI: 10.1038/s41598-023-33500-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2022] [Accepted: 04/13/2023] [Indexed: 04/26/2023] Open
Abstract
The main goal driving this work is to develop computer-aided classification models relying on clinical data to identify coronary artery disease (CAD) instances with high accuracy while incorporating the expert's opinion as input, making it a "man-in-the-loop" approach. CAD is traditionally diagnosed in a definite manner by Invasive Coronary Angiography (ICA). A dataset was created using biometric and clinical data from 571 patients (21 total features, 43% ICA-confirmed CAD instances) along with the expert's diagnostic yield. Five machine learning classification algorithms were applied to the dataset. For the selection of the best feature set for each algorithm, three different parameter selection algorithms were used. Each ML model's performance was evaluated using common metrics, and the best resulting feature set for each is presented. A stratified ten-fold validation was used for the performance evaluation. This procedure was run both using the assessments of experts/doctors as input and without them. The significance of this paper lies in its innovative approach of incorporating the expert's opinion as input in the classification process, making it a "man-in-the-loop" approach. This approach not only increases the accuracy of the models but also provides an added layer of explainability and transparency, allowing for greater trust and confidence in the results. Maximum achievable accuracy, sensitivity, and specificity are 83.02%, 90.32%, and 85.49% when using the expert's diagnosis as input, compared to 78.29%, 76.61%, and 86.07% without the expert's diagnosis. The results of this study demonstrate the potential for this approach to improve the diagnosis of CAD and highlight the importance of considering the role of human expertise in the development of computer-aided classification models.
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Affiliation(s)
| | - Serafeim Moustakidis
- Department of Energy Systems, University of Thessaly, Larisa, Greece.
- AIDEAS OÜ, Tallinn, Estonia.
| | - Ioannis D Apostolopoulos
- Department of Energy Systems, University of Thessaly, Larisa, Greece
- Department of Medical Physics, School of Medicine, University of Patras, Patras, Greece
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Groumpos PP, Apostolopoulos ID. Modeling the spread of dangerous pandemics with the utilization of a hybrid-statistical–Advanced-Fuzzy-Cognitive-Map algorithm: the example of COVID-19. RESEARCH ON BIOMEDICAL ENGINEERING 2021. [PMCID: PMC8475432 DOI: 10.1007/s42600-021-00182-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Abstract
Purpose The novel Coronavirus SARS-coV-2 outbreak late in 2019 and early 2020, known today as the COVID-19 pandemic, has spread fast throughout the world. It has considerably affected the lives of all people around the globe while the number of deaths related to the pandemic keeps increasing worldwide. Being able to predict the spread of the pandemic has been very helpful to governments to decide on actions. Statistical prediction models are capable of modeling a single snapshot but have several well-known weaknesses, such as linear assumptions between pandemic variables, while they cannot confirm the actual causality between studied factors. In the present work, the authors propose a state space Advanced Fuzzy Cognitive Maps (AFCM) approach model to predict the spread of the pandemic, using dynamic cause and effect relationships between pre-defined factors. Methods State-Space Advanced Fuzzy Cognitive Maps are proposed for modeling the spread of the pandemic, utilizing several social, policy, and healthcare factors. Statistical data from Greece, South Korea, and Germany are gathered to evaluate the performance of the proposed model. Results The proposed methodology was able to predict the pandemic trend in the studied countries, in terms of the total number of confirmed patient cases, yielding a coefficient of determination of 0.99, 0.94, and 0.97 respectively. The Pearson’s correlation coefficient was found to be 0.99, 0.97, and 0.98 respectively. Conclusion The results demonstrate the effectiveness and the advantages of the proposed methodology when modeling uncertain and dynamic situations, like novel pandemics.
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Ensastiga SAL, Rodríguez-Reséndiz J, Estévez-Bén AA. Speed controller-based fuzzy logic for a biosignal-feedbacked cycloergometer. Comput Methods Biomech Biomed Engin 2021; 25:750-763. [PMID: 34514912 DOI: 10.1080/10255842.2021.1977799] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Abstract
Nowadays, fuzzy-logic systems are implemented to control machinery or processes that previously required human manipulation. The main objective of this research is to propose a controller based on fuzzy-logic that uses bio-signals for decision making. The study presents the implementation of a fuzzy-speed controller for a therapeutic machine called cycloergometer. It is used in patients who require rehabilitation therapy to improve their mobility in the lower body or to increase their relaxation or flexibility. Basic controllers have been developed where the speed is decided through a user interface, and the therapist must constantly increase or decrease the speed according to the condition of the patient. In this paper, the speed of the therapy equipment is adjusted using the heart rate of the patient. In this way, a bio-signal is used to determine whether a person is tired or relaxed. Therefore, a mechanism is obtained that is not subject to the visual criteria of the therapist. A detailed review of the literature illustrates that one of the main limitations of electroencephalography and electromyography recordings is the low signal-to-noise ratio and the fact that the signals captured at the electrodes are a mixture of sources that cannot be observed directly with noninvasive methods. Therefore, it was decided to work with electrocardiogram-based signals for better robustness of the proposed system. The controller output is a voltage signal in PWM, which is determined by the membership and error functions. The behavior of the implemented controller is validated by different experimental tests based on the increase and decrease of the simulated and real heart rate of a patient. Finally, the results obtained and the possible areas of opportunity for the proposed design are discussed.
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Affiliation(s)
| | | | - Adyr A Estévez-Bén
- Facultad de Ingeniería, Universidad Autónoma de Querétaro, Querétaro, Mexico.,Facultad de Química, Universidad Autónoma de Querétaro, Querétaro, Mexico
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Apostolopoulos ID, Groumpos PP, Apostolopoulos DJ. Advanced fuzzy cognitive maps: state-space and rule-based methodology for coronary artery disease detection. Biomed Phys Eng Express 2021; 7. [PMID: 33930876 DOI: 10.1088/2057-1976/abfd83] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2021] [Accepted: 04/30/2021] [Indexed: 11/11/2022]
Abstract
According to the World Health Organization, 50% of deaths in European Union are caused by Cardiovascular Diseases (CVD), while 80% of premature heart diseases and strokes can be prevented. In this study, a Computer-Aided Diagnostic model for a precise diagnosis of Coronary Artery Disease (CAD) is proposed. The methodology is based on State Space Advanced Fuzzy Cognitive Maps (AFCMs), an evolution of the traditional Fuzzy Cognitive Maps. Also, a rule-based mechanism is incorporated, to further increase the knowledge of the proposed system and the interpretability of the decision mechanism. The proposed method is evaluated utilizing a CAD dataset from the Department of Nuclear Medicine of the University Hospital of Patras, in Greece. Several experiments are conducted to define the optimal parameters of the proposed AFCM. Furthermore, the proposed AFCM is compared with the traditional FCM approach and the literature. The experiments highlight the effectiveness of the AFCM approach, obtaining 85.47% accuracy in CAD diagnosis, showing an improvement of +7% over the traditional approach. It is demonstrated that the AFCM approach in developing Fuzzy Cognitive Maps outperforms the conventional approach, while it constitutes a reliable method for the diagnosis of Coronary Artery Disease.
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Affiliation(s)
- Ioannis D Apostolopoulos
- University of Patras, Medical School, Department of Medical Physics, Rio, Achaia, PC 26504, Greece
| | - Peter P Groumpos
- University of Patras, Department Electrical and Computer Engineering, Rio, Achaia, PC 26504, Greece
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