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Otero DM, Perret B, Teixeira L, Gautério GV, Treichel H, Kalil SJ. Cryptococcus laurentii: a wild yeast for xylanase production from agricultural by-products. Int Microbiol 2024:10.1007/s10123-024-00555-1. [PMID: 38970730 DOI: 10.1007/s10123-024-00555-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2024] [Revised: 06/26/2024] [Accepted: 07/02/2024] [Indexed: 07/08/2024]
Abstract
The development of technologies that allow the production of enzymes at a competitive cost is of great importance for several biotechnological applications, and the use of agro-industrial by-products is an excellent alternative to minimize costs and reduce environmental impacts. This study aimed to produce endo-xylanases using agro-industrial substrates rich in hemicellulose as sources of xylan in culture media. For this purpose, the yeast Cryptococcus laurentti and five lignocellulosic materials (defatted rice bran, rice husk, corn cob, oat husks, and soybean tegument), with and without pretreatment, were used as a source of xylan for enzyme production. To insert the by-products in the culture medium, they were dried and treated (if applicable) with 4% (w.v-1) NaOH and then added in a concentration of 2% (w.v-1). The cultures were agitated for 96 h, and the aliquots were removed to determine the enzymatic activities. Among the by-products studied, the maximum activity (8.7 U. mL-1 at pH 7.3) was obtained where rice bran was used. In contrast, corn cob was the by-product that resulted in lower enzyme production (1.6 U.mL-1). Thus, the defatted rice bran deserves special attention in front of the other by-products used since it provides the necessary substrate for producing endo-xylanases by yeast.
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Affiliation(s)
- Deborah Murowaniecki Otero
- Graduate Program in Food, Nutrition, and Health, Nutrition School, Federal University of Bahia, 32 Araújo Pinho, Salvador, Brazil
- Graduate Program in Food Science, Faculty of Pharmacy, Federal University of Bahia, Avenue Barão de Jeremoabo, Salvador, Brazil
| | - Bruno Perret
- School of Chemistry and Food, Federal University of Rio Grande, Avenue Italia Km 8, Rio Grande, Brazil
| | - Liliane Teixeira
- School of Chemistry and Food, Federal University of Rio Grande, Avenue Italia Km 8, Rio Grande, Brazil
| | - Gabrielle Vitória Gautério
- School of Chemistry, Department of Biochemical Engineering, Federal University of Rio de Janeiro, Avenue Athos da Silveira Ramos, Rio de Janeiro, 149, 2194, Brazil
| | - Helen Treichel
- Laboratory of Microbiology and Bioprocesses, Environmental Science and Technology, Federal University of Fronteira Sul, Erechim, Brazil.
| | - Susana Juliano Kalil
- School of Chemistry and Food, Federal University of Rio Grande, Avenue Italia Km 8, Rio Grande, Brazil
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Putra IGEP, Ulfah M, Nurhayati N, Helianti I. Coproduction of alkaline protease and xylanase from genetically modified Indonesian local Bacillus halodurans CM1 using corncob as an inducing substrate. Saudi J Biol Sci 2024; 31:103947. [PMID: 38371876 PMCID: PMC10873748 DOI: 10.1016/j.sjbs.2024.103947] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2023] [Revised: 01/29/2024] [Accepted: 02/02/2024] [Indexed: 02/20/2024] Open
Abstract
The production of corn generates a substantial amount of agro-industrial waste, with corncob accounting for a significant portion of this waste. In this study, we focused on utilizing corncob as a carbon source and inducer to simultaneously produce two valuable industrial enzymes, protease, and xylanase, using a recombinant strain of B. halodurans CM1. Interestingly, xylan-rich corncob not only enhanced the xylanase activity but also induced protease activity of the modified B. halodurans CM1 strain. The effect of corncob concentration on the coproduction of protease and xylanase was investigated. Corncob with 6 % concentration induced protease activity of 1020.7 U/mL and xylanase activity of 502.8 U/mL in a 7 L bioreactor under the condition of 1 vvm aeration, 250 rpm agitation, 37 °C temperature, initial pH 9.0, and 40 h incubation period. The protease produced was an alkalothermophilic enzyme whose highest activity was at pH 12 and 50 °C, and it belonged to a serine protease family. This alkalothermophilic protease's activity to some degree was reduced by Co2+, Mg2+, Fe2+, Zn2+, and K+, but enhanced by Ca2+ and Ni2+ (at 5 mM). The protease was stable even under the presence of a 15 % concentration of acetone, DMSO, ethanol, and isopropyl alcohol. The protease activity at 30 °C was not considerably changed by the presence of detergent, indicating excellent potential as a washing detergent additive. According to these findings, corncob has the potential to be a substrate for the coproduction of protease and xylanase, which have a wide range of industrial uses.
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Affiliation(s)
- I Gede Eka Perdana Putra
- Research Center for Applied Microbiology, National Research and Innovation Agency, Republic of Indonesia (BRIN). Jalan Raya Jakarta-Bogor Km. 46, Cibinong, Bogor, Jawa Barat 16911, Indonesia
| | - Maria Ulfah
- Research Center for Genetic Engineering, National Research and Innovation Agency, Republic of Indonesia (BRIN). Jalan Raya Jakarta-Bogor Km. 46, Cibinong, Bogor, Jawa Barat 16911, Indonesia
| | - Niknik Nurhayati
- Research Center for Genetic Engineering, National Research and Innovation Agency, Republic of Indonesia (BRIN). Jalan Raya Jakarta-Bogor Km. 46, Cibinong, Bogor, Jawa Barat 16911, Indonesia
| | - Is Helianti
- Research Center for Genetic Engineering, National Research and Innovation Agency, Republic of Indonesia (BRIN). Jalan Raya Jakarta-Bogor Km. 46, Cibinong, Bogor, Jawa Barat 16911, Indonesia
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Sodhi AS, Sharma N, Bhatia S, Verma A, Soni S, Batra N. Insights on sustainable approaches for production and applications of value added products. CHEMOSPHERE 2022; 286:131623. [PMID: 34346348 DOI: 10.1016/j.chemosphere.2021.131623] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2021] [Revised: 07/18/2021] [Accepted: 07/19/2021] [Indexed: 06/13/2023]
Abstract
The increasing demand for the development of sustainable strategies to utilize and process agro-industrial residues paves new paths for exploring innovative approaches in this area. Biotechnology based microbial transformations provide efficient, low cost and sustainable approaches for the production of value added products. The use of organic rich residues opens new avenues for the production of enzymes, pigments, biofuels, bioactive compounds, biopolymers etc. with vast industrial and therapeutic applications. Innovative technologies like strain improvement, enzyme immobilization, genome editing, morphological engineering, ultrasound/supercritical fluid/pulse electric field extraction, etc. can be employed. These will be helpful in achieving significant improvement in qualitative and quantitative parameters of the finished products. The global trend for the valorisation of biowaste has boosted the commercialization of these products which has transformed the markets by providing new investment opportunities. The upstream processing of raw materials using microbes poses a limitation in terms of product development and recovery which can be overcome by modifying the bioreactor design, physiological parameters or employing alternate technologies which will be discussed in this review. The other problems related to the processes include product stability, industrial applicability and cost competitiveness which needs to be addressed. This review comprehensively discusses the recent progress, avenues and challenges in the approaches aimed at valorisation of agro-industrial wastes along with possible opportunities in the bioeconomy.
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Affiliation(s)
- Abhinashi Singh Sodhi
- Department of Biotechnology, Goswami Ganesh Dutta Sanatan Dharma College, Sector-32-C, Chandigarh, 160030, India
| | - Neetu Sharma
- Department of Biotechnology, Goswami Ganesh Dutta Sanatan Dharma College, Sector-32-C, Chandigarh, 160030, India
| | - Sonu Bhatia
- Department of Biotechnology, Goswami Ganesh Dutta Sanatan Dharma College, Sector-32-C, Chandigarh, 160030, India
| | - Anoop Verma
- School of Energy and Environment, Thapar Institute of Engineering and Technology, Patiala, Punjab, India
| | - Sajeev Soni
- Department of Chemistry, Goswami Ganesh Dutta Sanatan Dharma College, Sector-32-C, Chandigarh, 160030, India
| | - Navneet Batra
- Department of Biotechnology, Goswami Ganesh Dutta Sanatan Dharma College, Sector-32-C, Chandigarh, 160030, India.
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Mohapatra BR. Solid-state fermentation conditions optimization, homology modelling and molecular docking of β-mannanase of a novel Streptomyces species LB66 isolated from Sargassum seaweed waste. BIOCATAL BIOTRANSFOR 2021. [DOI: 10.1080/10242422.2021.2010719] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- Bidyut R. Mohapatra
- Department of Biological and Chemical Sciences, The University of the West Indies, Cave Hill Campus, Bridgetown, Barbados
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Abdel-Mageed HM, Barakat AZ, Bassuiny RI, Elsayed AM, Salah HA, Abdel-Aty AM, Mohamed SA. Biotechnology approach using watermelon rind for optimization of α-amylase enzyme production from Trichoderma virens using response surface methodology under solid-state fermentation. Folia Microbiol (Praha) 2021; 67:253-264. [PMID: 34743285 DOI: 10.1007/s12223-021-00929-2] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2021] [Accepted: 10/28/2021] [Indexed: 11/27/2022]
Abstract
Production of amylases by fungi under solid-state fermentation is considered the best methodology for commercial scaling that addresses the ever-escalating needs of the worldwide enzyme market. Here response surface methodology (RSM) was used for the optimization of process variables for α-amylase enzyme production from Trichoderma virens using watermelon rinds (WMR) under solid-state fermentation (SSF). The statistical model included four variables, each detected at two levels, followed by model development with partial purification and characterization of α-amylase. The partially purified α-amylase was characterized with regard to optimum pH, temperature, kinetic constant, and substrate specificity. The results indicated that both pH and moisture content had a significant effect (P < 0.05) on α-amylase production (880 U/g) under optimized process conditions at a 3-day incubation time, moisture content of 50%, 30 °C, and pH 6.98. Statistical optimization using RSM showed R2 values of 0.9934, demonstrating the validity of the model. Five α-amylases were separated by using DEAE-Sepharose and characterized with a wide range of optimized pH values (pH 4.5-9.0), temperature optima (40-60 °C), low Km values (2.27-3.3 mg/mL), and high substrate specificity toward large substrates. In conclusion, this study presents an efficient and green approach for utilization of agro-waste for production of the valuable α-amylase enzyme using RSM under SSF. RSM was particularly beneficial for the optimization and analysis of the effective process parameters.
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Affiliation(s)
- Heidi M Abdel-Mageed
- Molecular Biology Department, Genetic Engineering and Biotechnology Division, National Research Centre, El Behoth St, Dokki, Cairo, Egypt.
| | - Amal Z Barakat
- Molecular Biology Department, Genetic Engineering and Biotechnology Division, National Research Centre, El Behoth St, Dokki, Cairo, Egypt
| | - Roqaya I Bassuiny
- Molecular Biology Department, Genetic Engineering and Biotechnology Division, National Research Centre, El Behoth St, Dokki, Cairo, Egypt
| | - Alshaimaa M Elsayed
- Molecular Biology Department, Genetic Engineering and Biotechnology Division, National Research Centre, El Behoth St, Dokki, Cairo, Egypt
| | - Hala A Salah
- Molecular Biology Department, Genetic Engineering and Biotechnology Division, National Research Centre, El Behoth St, Dokki, Cairo, Egypt
| | - Azza M Abdel-Aty
- Molecular Biology Department, Genetic Engineering and Biotechnology Division, National Research Centre, El Behoth St, Dokki, Cairo, Egypt
| | - Saleh A Mohamed
- Molecular Biology Department, Genetic Engineering and Biotechnology Division, National Research Centre, El Behoth St, Dokki, Cairo, Egypt
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Mohapatra BR. Characterization of β-mannanase extracted from a novel Streptomyces species Alg-S25 immobilized on chitosan nanoparticles. BIOTECHNOL BIOTEC EQ 2020. [DOI: 10.1080/13102818.2020.1858158] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
Affiliation(s)
- Bidyut Ranjan Mohapatra
- Department of Biological and Chemical Sciences, The University of the West Indies, Bridgetown, Barbados
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Amobonye A, Bhagwat P, Singh S, Pillai S. Enhanced xylanase and endoglucanase production from Beauveria bassiana SAN01, an entomopathogenic fungal endophyte. Fungal Biol 2020; 125:39-48. [PMID: 33317775 DOI: 10.1016/j.funbio.2020.10.003] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2020] [Revised: 10/04/2020] [Accepted: 10/06/2020] [Indexed: 01/07/2023]
Abstract
This study was undertaken to explore alternative applications of the widely known entomopathogenic/endophytic fungus, Beauveria bassiana, besides its sole use as a biocontrol agent. B. bassiana SAN01, was investigated for the production of two glycoside hydrolases, xylanase and endoglucanase under submerged conditions. Among the different biomass tested, wheat bran provided the best results for both xylanase and endoglucanase, and their production levels were further enhanced using response surface methodology. Under optimised conditions, heightened yields of 1061 U/ml and 23.03 U/ml were observed for xylanase and endoglucanase, respectively, which were 3.44 and 1.35 folds higher than their initial yields. These are the highest ever production levels reported for xylanase and endoglucanase from any B. bassiana strain or any known entomopathogenic fungi. Furthermore, the efficacy of xylanase/endoglucanase cocktail in the saccharification of sugarcane bagasse was evaluated. The highest amount of reducing sugar released from the pretreated biomass by the action of the crude Beauveria enzyme cocktail was recorded at 30°C after 8 h incubation. The significant activities of the hydrolytic enzymes recorded with B. bassiana in this study thus present promising avenues for the use of the entomopathogen as a new source of industrial enzymes and by extension, other biotechnological applications.
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Affiliation(s)
- Ayodeji Amobonye
- Department of Biotechnology and Food Technology, Faculty of Applied Sciences, Durban University of Technology, P O Box 1334, Durban, 4000, South Africa
| | - Prashant Bhagwat
- Department of Biotechnology and Food Technology, Faculty of Applied Sciences, Durban University of Technology, P O Box 1334, Durban, 4000, South Africa
| | - Suren Singh
- Department of Biotechnology and Food Technology, Faculty of Applied Sciences, Durban University of Technology, P O Box 1334, Durban, 4000, South Africa
| | - Santhosh Pillai
- Department of Biotechnology and Food Technology, Faculty of Applied Sciences, Durban University of Technology, P O Box 1334, Durban, 4000, South Africa.
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Borges JP, Quilles Junior JC, Ohe THK, Ferrarezi AL, Nunes CDCC, Boscolo M, Gomes E, Bocchini DA, da Silva R. Free and Substrate-Immobilised Lipases from Fusarium verticillioides P24 as a Biocatalyst for Hydrolysis and Transesterification Reactions. Appl Biochem Biotechnol 2020; 193:33-51. [PMID: 32808248 DOI: 10.1007/s12010-020-03411-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2020] [Accepted: 08/12/2020] [Indexed: 11/26/2022]
Abstract
Fungal enzymes are widely used in technological processes and have some interesting features to be applied in a variety of biosynthetic courses. Here, free and substrate-immobilised lipases from Fusarium verticillioides P24 were obtained by solid-state fermentation using wheat bran as substrate and fungal carrier. Based on their hydrolytic and transesterification activities, the lipases were characterised as pH-dependent in both reactions, with higher substrate conversion in an alkaline environment. Thermally, the lipases performed well from 30 to 45 °C, being more stable in mild conditions. Organic solvents significantly influenced the lipase selectivity using different vegetable oils as fatty acid source. Omega(ω)-3 production in n-hexane achieved 45% using canola oil, against ≈ 18% in cyclohexane. However, ω-6 production was preferably produced for both solvents using linseed oil with significant alterations in the yield (≈ 79% and 49% for n-hexane and cyclohexane, respectively). Moreover, the greatest enzyme selectivity for ω-6 led us to suppose a lipase preference for the Sn1 position of the triacylglycerol. Lastly, a transesterification reaction was performed, achieving 90% of ester conversion in 72 h. This study reports the characterisation and use of free and substrate-immobilised lipases from Fusarium verticillioides P24 as an economic and efficient method for the first time.
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Affiliation(s)
- Janaina Pires Borges
- Departament of Biochemistry and Chemical Technology, IQ/UNESP, Rua Prof. Francisco Degni, 55, CEP, Araraquara, SP, 14800-060, Brazil
| | - José Carlos Quilles Junior
- Department of Chemistry and Environmental Sciences, IBILCE/UNESP, Rua Cristóvão Colombo, 2265, CEP, São José do Rio Preto, SP, 15054-000, Brazil
| | - Thiago Hideyuki Kobe Ohe
- Department of Chemistry and Environmental Sciences, IBILCE/UNESP, Rua Cristóvão Colombo, 2265, CEP, São José do Rio Preto, SP, 15054-000, Brazil
| | - Ana Lucia Ferrarezi
- Department of Biology, IBILCE/UNESP, Rua Cristóvão Colombo, 2265, CEP, São José do Rio Preto, SP, 15054-000, Brazil
| | | | - Mauricio Boscolo
- Department of Chemistry and Environmental Sciences, IBILCE/UNESP, Rua Cristóvão Colombo, 2265, CEP, São José do Rio Preto, SP, 15054-000, Brazil
| | - Eleni Gomes
- Department of Biology, IBILCE/UNESP, Rua Cristóvão Colombo, 2265, CEP, São José do Rio Preto, SP, 15054-000, Brazil
| | - Daniela Alonso Bocchini
- Departament of Biochemistry and Chemical Technology, IQ/UNESP, Rua Prof. Francisco Degni, 55, CEP, Araraquara, SP, 14800-060, Brazil
| | - Roberto da Silva
- Department of Chemistry and Environmental Sciences, IBILCE/UNESP, Rua Cristóvão Colombo, 2265, CEP, São José do Rio Preto, SP, 15054-000, Brazil.
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