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Chen M, Wang Z, Hao Z, Li H, Feng Q, Yang X, Han X, Zhao X. Screening and Validation of Appropriate Reference Genes for Real-Time Quantitative PCR under PEG, NaCl and ZnSO 4 Treatments in Broussonetia papyrifera. Int J Mol Sci 2023; 24:15087. [PMID: 37894768 PMCID: PMC10606616 DOI: 10.3390/ijms242015087] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2023] [Revised: 10/04/2023] [Accepted: 10/07/2023] [Indexed: 10/29/2023] Open
Abstract
Real-time quantitative PCR (RT-qPCR) has a high sensitivity and strong specificity, and is widely used in the analysis of gene expression. Selecting appropriate internal reference genes is the key to accurately analyzing the expression changes of target genes by RT-qPCR. To find out the most suitable internal reference genes for studying the gene expression in Broussonetia papyrifera under abiotic stresses (including drought, salt, and ZnSO4 treatments), seven different tissues of B. papyrifera, as well as the roots, stems, and leaves of B. papyrifera under the abiotic stresses were used as test materials, and 15 candidate internal reference genes were screened based on the transcriptome data via RT-qPCR. Then, the expression stability of the candidate genes was comprehensively evaluated through the software geNorm (v3.5), NormFinder (v0.953), BestKeeper (v1.0), and RefFinder. The best internal reference genes and their combinations were screened out according to the analysis results. rRNA and Actin were the best reference genes under drought stress. Under salt stress, DOUB, HSP, NADH, and rRNA were the most stable reference genes. Under heavy metal stress, HSP and NADH were the most suitable reference genes. EIF3 and Actin were the most suitable internal reference genes in the different tissues of B. papyrifera. In addition, HSP, rRNA, NADH, and UBC were the most suitable internal reference genes for the abiotic stresses and the different tissues of B. papyrifera. The expression patterns of DREB and POD were analyzed by using the selected stable and unstable reference genes. This further verified the reliability of the screened internal reference genes. This study lays the foundation for the functional analysis and regulatory mechanism research of genes in B. papyrifera.
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Affiliation(s)
- Mengdi Chen
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang 471023, China; (M.C.)
| | - Zhengbo Wang
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang 471023, China; (M.C.)
| | - Ziyuan Hao
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang 471023, China; (M.C.)
| | - Hongying Li
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang 471023, China; (M.C.)
| | - Qi Feng
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang 471023, China; (M.C.)
| | - Xue Yang
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang 471023, China; (M.C.)
| | - Xiaojiao Han
- Key Laboratory of Tree Breeding of Zhejiang Province, Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou 311400, China
| | - Xiping Zhao
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang 471023, China; (M.C.)
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Liang J, Wang Z, Ren Y, Jiang Z, Chen H, Hu W, Tang M. The alleviation mechanisms of cadmium toxicity in Broussonetia papyrifera by arbuscular mycorrhizal symbiosis varied with different levels of cadmium stress. JOURNAL OF HAZARDOUS MATERIALS 2023; 459:132076. [PMID: 37478589 DOI: 10.1016/j.jhazmat.2023.132076] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2023] [Revised: 07/10/2023] [Accepted: 07/14/2023] [Indexed: 07/23/2023]
Abstract
The alleviation of cadmium (Cd) toxicity in Broussonetia papyrifera by arbuscular mycorrhizal (AM) fungi are still not completely elucidated. This study investigated the effects of Rhizophagus irregularis on physiological and biochemical characteristics, and molecular regulation in B. papyrifera under different levels of Cd (0, 30, 90 and 270 mg kg-1 Cd) stress. Results showed that (1) AM symbiosis improved the growth and photosynthesis, enhanced ROS levels as stress signaling and maintained ROS balance under low and medium Cd stress. (2) AM symbiosis regulated AsA-GSH cycle to mitigate ROS overproduction under high Cd stress. (3) AM fungus can chelate more Cd under high Cd stress, increasing soil pH and GRSP content. (4) AM plants can fix or chelate more Cd by P in leaves and reserve more P in stems under high Cd stress. (5) AM symbioses increased root net Cd2+ influx and uptake under medium Cd stress but inhibited under high Cd stress, with upregulation of genes related heavy metals (HMs) transport under medium Cd stress and inhibited the transcription of genes related HMs transport under high Cd stress. Therefore, the alleviation mechanisms of Cd toxicity in B. papyrifera by R. irregularis symbiosis depends on the levels of Cd stress.
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Affiliation(s)
- Jingwei Liang
- State Key Laboratory of Conservation and Utilization of Subtropical Agro-Bioresources, Guangdong Laboratory for Lingnan Modern Agriculture, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China
| | - Zhihao Wang
- State Key Laboratory of Conservation and Utilization of Subtropical Agro-Bioresources, Guangdong Laboratory for Lingnan Modern Agriculture, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China
| | - Ying Ren
- State Key Laboratory of Conservation and Utilization of Subtropical Agro-Bioresources, Guangdong Laboratory for Lingnan Modern Agriculture, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China
| | - Zhijian Jiang
- Key Laboratory of Tropical Marine Bio-resources and Ecology, Chinese Academy of Sciences, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou 510301, China
| | - Hui Chen
- State Key Laboratory of Conservation and Utilization of Subtropical Agro-Bioresources, Guangdong Laboratory for Lingnan Modern Agriculture, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China
| | - Wentao Hu
- State Key Laboratory of Conservation and Utilization of Subtropical Agro-Bioresources, Guangdong Laboratory for Lingnan Modern Agriculture, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China.
| | - Ming Tang
- State Key Laboratory of Conservation and Utilization of Subtropical Agro-Bioresources, Guangdong Laboratory for Lingnan Modern Agriculture, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China.
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Manwani S, Devi P, Singh T, Yadav CS, Awasthi KK, Bhoot N, Awasthi G. Heavy metals in vegetables: a review of status, human health concerns, and management options. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:71940-71956. [PMID: 35921005 DOI: 10.1007/s11356-022-22210-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2022] [Accepted: 07/21/2022] [Indexed: 06/14/2023]
Abstract
For sustainable global growth, food security is a prime concern issue, both quantitatively and qualitatively. Adverse effects on crop quality from contaminants like heavy metals have affected food security and human health. Vegetables comprise the essential and nutritious part of the human diet as they contain a lot of health-promoting minerals and vitamins. However, the inadvertent excess accumulation of heavy metals (As, Cd, Hg, and Pb) in vegetables and their subsequent intake by humans may affect their physiology and metabolomics and has been associated with diseases like cancer, mental retardation, and immunosuppression. Many known sources of hazardous metals are volcano eruptions, soil erosion, use of chemical fertilizers in agriculture, the use of pesticides and herbicides, and irrigation with wastewater, industrial effluents, etc. that contaminate the vegetables through the soil, air and water. In this review, the problem of heavy metal contamination in vegetables is discussed along with the prospective management strategies like soil amendments, application of bioadsorbents, membrane filtration, bioremediation, and nanoremediation.
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Affiliation(s)
- Seema Manwani
- Department of Life Sciences, Vivekananda Global University, Jaipur, Rajasthan, 303012, India
| | - Pooja Devi
- Department of Life Sciences, Vivekananda Global University, Jaipur, Rajasthan, 303012, India
| | - Tanvi Singh
- Department of Zoology, Delhi University, Delhi, 110007, India
| | - Chandra Shekhar Yadav
- Department of Life Sciences, Vivekananda Global University, Jaipur, Rajasthan, 303012, India
- School of Forensic Science, National Forensic Science University, Gandhinagar, 382007, India
| | - Kumud Kant Awasthi
- Department of Life Sciences, Vivekananda Global University, Jaipur, Rajasthan, 303012, India
| | - Narain Bhoot
- Central Laboratory, Rajasthan State Pollution Control Board, Jaipur, Rajasthan, 302004, India
| | - Garima Awasthi
- Department of Life Sciences, Vivekananda Global University, Jaipur, Rajasthan, 303012, India.
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Zeng P, Zhou H, Deng P, Gu J, Liao B. Effects of topdressing silicon fertilizer at key stages on uptake and accumulation of arsenic in rice. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:31309-31319. [PMID: 36445527 DOI: 10.1007/s11356-022-24365-y] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2022] [Accepted: 11/17/2022] [Indexed: 06/16/2023]
Abstract
The booting stage and filling stage have been considered as the key stages for arsenic (As) uptake in rice. In this study, a field study was conducted to investigate the influence of the topdressing different amounts of silicon (Si) fertilizer at the key stages on rice As uptake and accumulation. The results showed that topdressing of a low amount of Si fertilizer at the booting stage and filling stage could increase rice yield, promote the formation of iron plaque and the retention of As on iron plaque, and reduce inorganic As content in brown rice. Compared with the control, the rice grain yield was increased by 22.60% with the topdressing of 20 kg·hm-2 Si fertilizer at the grain filling stage. As compared with the control, the Fe and As content in iron plaque under the topdressing of 20 kg·hm-2 Si fertilizer at the booting stage and filling stage was significantly (p < 0.05) increased by 84.34% and 87.78% (Fe content) and 70.96% and 63.80% (As content), respectively. Meanwhile, contents of As in rice roots, stems, and husks at the topdressing of 20 kg·hm-2 Si fertilizer at the booting stage were significantly (p < 0.05) reduced by 45.10%, 33.34%, and 31.23%, respectively, relative to the control. The lowest inorganic As content (0.21 mg·kg-1) in brown rice was obtained at the topdressing of 20 kg·hm-2 Si fertilizer at the booting stage, which was close to the National Food Limit Standard of 0.20 mg·kg-1 (GB 2762-2017). Therefore, topdressing of 20 kg·hm-2 Si fertilizer at the booting stage might be considered as an effective method to reduce inorganic As content in brown rice.
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Affiliation(s)
- Peng Zeng
- College of Environmental Science and Engineering, Central South University of Forestry and Technology, Changsha, 410004, China
- Hunan Engineering Laboratory for Control of Rice Quality and Safety, Central South University of Forestry and Technology, Changsha, 410004, China
| | - Hang Zhou
- College of Environmental Science and Engineering, Central South University of Forestry and Technology, Changsha, 410004, China.
- Hunan Engineering Laboratory for Control of Rice Quality and Safety, Central South University of Forestry and Technology, Changsha, 410004, China.
| | - Penghui Deng
- College of Environmental Science and Engineering, Central South University of Forestry and Technology, Changsha, 410004, China
| | - Jiaofeng Gu
- College of Environmental Science and Engineering, Central South University of Forestry and Technology, Changsha, 410004, China
- Hunan Engineering Laboratory for Control of Rice Quality and Safety, Central South University of Forestry and Technology, Changsha, 410004, China
| | - Bohan Liao
- College of Environmental Science and Engineering, Central South University of Forestry and Technology, Changsha, 410004, China
- Hunan Engineering Laboratory for Control of Rice Quality and Safety, Central South University of Forestry and Technology, Changsha, 410004, China
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Zeng P, Liu J, Zhou H, Wei B, Gu J, Liao Y, Liao B, Luo X. Co-application of combined amendment (limestone and sepiolite) and Si fertilizer reduces rice Cd uptake and transport through Cd immobilization and Si-Cd antagonism. CHEMOSPHERE 2023; 316:137859. [PMID: 36649896 DOI: 10.1016/j.chemosphere.2023.137859] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2022] [Revised: 01/02/2023] [Accepted: 01/11/2023] [Indexed: 06/17/2023]
Abstract
Limestone and sepiolite combined amendment (LS) and silicon (Si) fertilizers are commonly applied for the remediation of Cd-polluted paddy soil. However, it is difficult to further decrease cadmium (Cd) accumulation in rice grains by the individual application of LS or Si fertilizer to heavily Cd-polluted paddy fields. Two seasons of continuous field experiments were conducted in heavily Cd-polluted soil to study how the co-application of LS and Si fertilizer (namely soil-applied Si and foliar-sprayed Si) influences Cd and Si bioavailability in soil and Cd uptake and transport in rice. The results indicated that LS co-applied with soil-applied Si fertilizer treatments can enhance pH, cation exchange capacity (CEC), and available Si content in soil by 0.56-1.26 units, 19.3%-57.2%, and 14.7%-58.9% (p < 0.05), respectively, and reduce the toxicity characteristic leaching procedure (TCLP) extractable Cd content in soil by 26.5%-49.8% (p < 0.05) relative to the control. Furthermore, the co-application of LS and soil and foliar-sprayed Si fertilizer treatments reduced the Cd content in brown rice by 18.8%-70.6% (p < 0.05) compared with the control. Particularly, the brown rice Cd content under the co-application treatment (4500 kg/ha of soil applied LS, 90 kg/ha of Si fertilizer, and 0.4 g/L of foliar-sprayed Si fertilizer) was below 0.20 mg/kg in both seasons. Meanwhile, the Si content in rice was considerably enhanced by LS co-applied with Si fertilizer and negatively (p < 0.05) correlated with the rice Cd content. Therefore, the reduction of Cd bioavailability in soil and the antagonistic effect between Cd and Si in rice might be the key factors regulating Cd accumulation in rice via the co-application of LS and Si fertilizer.
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Affiliation(s)
- Peng Zeng
- College of Environmental Science and Engineering, Central South University of Forestry and Technology, Changsha, 410004, China; Hunan Engineering Laboratory for Control of Rice Quality and Safety, Changsha, 410004, China.
| | - Jiawei Liu
- College of Environmental Science and Engineering, Central South University of Forestry and Technology, Changsha, 410004, China
| | - Hang Zhou
- College of Environmental Science and Engineering, Central South University of Forestry and Technology, Changsha, 410004, China; Hunan Engineering Laboratory for Control of Rice Quality and Safety, Changsha, 410004, China.
| | - Binyun Wei
- College of Environmental Science and Engineering, Central South University of Forestry and Technology, Changsha, 410004, China
| | - Jiaofeng Gu
- College of Environmental Science and Engineering, Central South University of Forestry and Technology, Changsha, 410004, China; Hunan Engineering Laboratory for Control of Rice Quality and Safety, Changsha, 410004, China
| | - Ye Liao
- College of Environmental Science and Engineering, Central South University of Forestry and Technology, Changsha, 410004, China; Hunan Engineering Laboratory for Control of Rice Quality and Safety, Changsha, 410004, China
| | - Bohan Liao
- College of Environmental Science and Engineering, Central South University of Forestry and Technology, Changsha, 410004, China; Hunan Engineering Laboratory for Control of Rice Quality and Safety, Changsha, 410004, China.
| | - Xufeng Luo
- College of Environmental Science and Engineering, Central South University of Forestry and Technology, Changsha, 410004, China
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Chen Y, Wang L, Liu X, Wang F, An Y, Zhao W, Tian J, Kong D, Zhang W, Xu Y, Ba Y, Zhou H. The Genus Broussonetia: An Updated Review of Phytochemistry, Pharmacology and Applications. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27165344. [PMID: 36014582 PMCID: PMC9414938 DOI: 10.3390/molecules27165344] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/08/2022] [Revised: 08/15/2022] [Accepted: 08/18/2022] [Indexed: 02/05/2023]
Abstract
The Broussonetia genus (Moraceae), recognized for its value in many Chinese traditional herbs, mainly includes Broussonetia papyrifera (L.) L’Hér. ex Vent. (BP), Broussonetia kazinoki Siebold (BK), and Broussonetia luzonica (Blanco) Bureau (BL). Hitherto, researchers have found 338 compounds isolated from BP, BK, and BL, which included flavonoids, polyphenols, phenylpropanoids, alkaloids, terpenoids, steroids, and others. Moreover, its active compounds and extracts have exhibited a variety of pharmacological effects such as antitumor, antioxidant, anti-inflammatory, antidiabetic, anti-obesity, antibacterial, and antiviral properties, and its use against skin wrinkles. In this review, the phytochemistry and pharmacology of Broussonetia are updated systematically, after its applications are first summarized. In addition, this review also discusses the limitations of investigations and the potential direction of Broussonetia. This review can help to further understand the phytochemistry, pharmacology, and other applications of Broussonetia, which paves the way for future research.
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Geographical Variation in the Growth and Nutritional Traits of Leaf Powder from Broussonetia papyrifera (L.) L’Hér. ex Vent. from Different Provenances. FORESTS 2022. [DOI: 10.3390/f13060868] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
Broussonetia papyrifera (L.) L’Hér. ex Vent, a perennial deciduous tree, is used in feed, medicine, papermaking, environmental protection, and ecological restoration. This paper ttook 33 provenances from the natural distribution as the research objects, observes their growth and nutritional traits, and analyzes the laws of geographical variation. The repeatability was 0.80–0.88 and 0.48–0.91, respectively. The correlation was significant (the correlation coefficient was 0.764). The variation is greatly affected by the latitudinal direction. Through clustering, the 33 provenances were clustered into 4 groups and most provenances with relatively close geographical origins were clustered together, showing differences between different geographical regions. Using leaf biomass (0.4662 g) and crude protein content (14.39%) as the selection index, the Sichuan Mianyang (SCMY), Chongqing Kaizhou (CQKZ), Shanghai (SH), and Fujian Nanping (FJNP) provenances were selected as fast-growing, high-yield, and high-quality paper mulberry provenances. This study provides the basis for the selection of excellent paper mulberry trees.
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