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Messina E, Pezzella M, Vecchio A. Nonlocal finite difference discretization of a class of renewal equation models for epidemics. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2023; 20:11656-11675. [PMID: 37501414 DOI: 10.3934/mbe.2023518] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/29/2023]
Abstract
In this paper we consider a non-standard discretization to a Volterra integro-differential system which includes a number of age-of-infection models in the literature. The aim is to provide a general framework to analyze the proposed scheme for the numerical solution of a class of problems whose continuous dynamic is well known in the literature and allow a deeper analysis in cases where the theory lacks.
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Affiliation(s)
- Eleonora Messina
- Department of Mathematics and Applications, University of Naples Federico II, Via Cintia, I-80126 Naples, Italy
- Member of the Italian INdAM Research group GNCS
| | - Mario Pezzella
- Department of Mathematics and Applications, University of Naples Federico II, Via Cintia, I-80126 Naples, Italy
- Member of the Italian INdAM Research group GNCS
| | - Antonia Vecchio
- Member of the Italian INdAM Research group GNCS
- C.N.R. National Research Council of Italy, Institute for Computational Application "Mauro Picone", Via P. Castellino, 111 - 80131 Naples, Italy
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David JF, Iyaniwura SA. Effect of Human Mobility on the Spatial Spread of Airborne Diseases: An Epidemic Model with Indirect Transmission. Bull Math Biol 2022; 84:63. [PMID: 35507091 PMCID: PMC9066407 DOI: 10.1007/s11538-022-01020-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2021] [Accepted: 04/03/2022] [Indexed: 11/12/2022]
Abstract
We extended a class of coupled PDE-ODE models for studying the spatial spread of airborne diseases by incorporating human mobility. Human populations are modeled with patches, and a Lagrangian perspective is used to keep track of individuals' places of residence. The movement of pathogens in the air is modeled with linear diffusion and coupled to the SIR dynamics of each human population through an integral of the density of pathogens around the population patches. In the limit of fast diffusion pathogens, the method of matched asymptotic analysis is used to reduce the coupled PDE-ODE model to a nonlinear system of ODEs for the average density of pathogens in the air. The reduced system of ODEs is used to derive the basic reproduction number and the final size relation for the model. Numerical simulations of the full PDE-ODE model and the reduced system of ODEs are used to assess the impact of human mobility, together with the diffusion of pathogens on the dynamics of the disease. Results from the two models are consistent and show that human mobility significantly affects disease dynamics. In addition, we show that an increase in the diffusion rate of pathogen leads to a lower epidemic.
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Affiliation(s)
- Jummy F David
- Department of Mathematics and Statistics, York University, Toronto, ON, Canada.
- Laboratory for Industrial and Applied Mathematics, York University, Toronto, ON, Canada.
- Fields-CQAM Laboratory of Mathematics for Public Health (MfPH), York University, Toronto, ON, Canada.
| | - Sarafa A Iyaniwura
- Department of Mathematics and Institute of Applied Mathematics, University of British Columbia, Vancouver, BC, Canada.
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Abstract
In this paper, we study a dynamically consistent numerical method for the approximation of a nonlinear integro-differential equation modeling an epidemic with age of infection. The discrete scheme is based on direct quadrature methods with Gregory convolution weights and preserves, with no restrictive conditions on the step-length of integration h, some of the essential properties of the continuous system. In particular, the numerical solution is positive and bounded and, in cases of interest in applications, it is monotone. We prove an order of convergence theorem and show by numerical experiments that the discrete final size tends to its continuous equivalent as h tends to zero.
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Cui J, Wu Y, Guo S. Effect of Non-homogeneous Mixing and Asymptomatic Individuals on Final Epidemic Size and Basic Reproduction Number in a Meta-Population Model. Bull Math Biol 2022; 84:38. [PMID: 35132526 PMCID: PMC8821870 DOI: 10.1007/s11538-022-00996-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2021] [Accepted: 01/18/2022] [Indexed: 11/29/2022]
Abstract
To uncover the effective interventions during the pandemic period, a novel mathematical model, which incorporates separate compartments for incubation and asymptomatic individuals, has been developed in this paper. On the basis of a general mixing, final size relation and next-generation matrix are derived for a meta-population model by introducing the matrix blocking. The final size (\documentclass[12pt]{minimal}
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\begin{document}$${\mathcal {F}}$$\end{document}F) and the basic reproduction number (\documentclass[12pt]{minimal}
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\begin{document}$${\mathcal {R}}_{0}$$\end{document}R0) are no longer a simple monotonous relationship. The analytical results of heterogeneity illustrate that activity is more sensitive than the others. And the proportion of asymptomatic individuals is a key factor for final epidemic size compared to the regulatory factor. Furthermore, the impact of preferential contact level on \documentclass[12pt]{minimal}
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\begin{document}$${\mathcal {F}}$$\end{document}F and \documentclass[12pt]{minimal}
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\begin{document}$${\mathcal {R}}_{0}$$\end{document}R0 is comparatively complex. The isolation can effectively reduce the final size, which further verifies its effectiveness. When vaccination is considered, the mixing methods maybe influence the doses of vaccination used and its effective. Moreover, using the present predictive model, we can provide the valuable reference about identifying the ideal strategies to curb the pandemic disease.
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Affiliation(s)
- Jingan Cui
- School of Science, Beijing University of Civil Engineering and Architecture, Beijing, 102616, People's Republic of China.
| | - Yucui Wu
- School of Science, Beijing University of Civil Engineering and Architecture, Beijing, 102616, People's Republic of China
| | - Songbai Guo
- School of Science, Beijing University of Civil Engineering and Architecture, Beijing, 102616, People's Republic of China
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Cryptocurrency as Epidemiologically Safe Means of Transactions: Diminishing Risk of SARS-CoV-2 Spread. MATHEMATICS 2021. [DOI: 10.3390/math9243263] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
In comparison with other respiratory viruses, the current COVID-19 pandemic’s rapid seizing the world can be attributed to indirect (contact) way of transmission of SARS-CoV-2 virus in addition to the regular airborne way. A significant part of indirect transmission is made through cash bank notes. SARS-CoV-2 remains on cash paper money for period around four times larger than influenza A virus and is absorbed by cash notes two and a half times more effectively than influenza A (our model). During the pandemic, cryptocurrencies have gained attractiveness as an “epidemiologically safe” means of transactions. On the basis of the authors’ gallop polls performed online with social networks users in 44 countries in 2020–2021 (the total number of clear responses after the set repair 32,115), around 14.7% of surveyed participants engaged in cryptocurrency-based transactions during the pandemic. This may be one of the reasons of significant rise of cryptocurrencies rates since mid-March 2020 till the end of 2021. The paper discusses the reasons for cryptocurrency attractiveness during the COVID-19 pandemic. Among them, there are fear of SARS-CoV-2 spread via cash contacts and the ability of the general population to mine cryptocurrencies. The article also provides a breakdown of the polled audience profile to determine the nationalities that have maximal level of trust to saving and transacting money as cryptocurrencies.
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Iyaniwura SA, Rabiu M, David JF, Kong JD. Assessing the impact of adherence to Non-pharmaceutical interventions and indirect transmission on the dynamics of COVID-19: a mathematical modelling study. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2021; 18:8905-8932. [PMID: 34814328 DOI: 10.3934/mbe.2021439] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
Adherence to public health policies such as the non-pharmaceutical interventions implemented against COVID-19 plays a major role in reducing infections and controlling the spread of the diseases. In addition, understanding the transmission dynamics of the disease is also important in order to make and implement efficient public health policies. In this paper, we developed an SEIR-type compartmental model to assess the impact of adherence to COVID-19 non-pharmaceutical interventions and indirect transmission on the dynamics of the disease. Our model considers both direct and indirect transmission routes and stratifies the population into two groups: those that adhere to COVID-19 non-pharmaceutical interventions (NPIs) and those that do not adhere to the NPIs. We compute the control reproduction number and the final epidemic size relation for our model and study the effect of different parameters of the model on these quantities. Our results show that there is a significant benefit in adhering to the COVID-19 NPIs.
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Affiliation(s)
- Sarafa A Iyaniwura
- Department of Mathematics and Institute of Applied Mathematics, University of British Columbia, Vancouver, BC, Canada
| | - Musa Rabiu
- School of Mathematics, Statistics & Computer Science, University of KwaZulu-Natal, Durban, South Africa
| | - Jummy F David
- Department of Mathematics and Statistics, York University, Toronto, Ontario, Canada
- Canadian Centre for Diseases Modeling (CCDM), York University, Toronto, Ontario, Canada
| | - Jude D Kong
- Department of Mathematics and Statistics, York University, Toronto, Ontario, Canada
- Africa-Canada Artificial Intelligence and Data Innovation Consortium (ACADIC), York University, Toronto, Ontario, Canada
- Laboratory for Applied and Industrial Mathematics (LIAM), York University, Toronto, Ontario, Canada
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Gandzha IS, Kliushnichenko OV, Lukyanets SP. Modeling and controlling the spread of epidemic with various social and economic scenarios. CHAOS, SOLITONS, AND FRACTALS 2021; 148:111046. [PMID: 34103789 PMCID: PMC8174143 DOI: 10.1016/j.chaos.2021.111046] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/17/2021] [Accepted: 05/06/2021] [Indexed: 06/12/2023]
Abstract
We propose a dynamical model for describing the spread of epidemics. This model is an extension of the SIQR (susceptible-infected-quarantined-recovered) and SIRP (susceptible-infected-recovered-pathogen) models used earlier to describe various scenarios of epidemic spreading. As compared to the basic SIR model, our model takes into account two possible routes of contagion transmission: direct from the infected compartment to the susceptible compartment and indirect via some intermediate medium or fomites. Transmission rates are estimated in terms of average distances between the individuals in selected social environments and characteristic time spans for which the individuals stay in each of these environments. We also introduce a collective economic resource associated with the average amount of money or income per individual to describe the socioeconomic interplay between the spreading process and the resource available to infected individuals. The epidemic-resource coupling is supposed to be of activation type, with the recovery rate governed by the Arrhenius-like law. Our model brings an advantage of building various control strategies to mitigate the effect of epidemic and can be applied, in particular, to modeling the spread of COVID-19.
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Affiliation(s)
- I S Gandzha
- Institute of Physics, National Academy of Sciences of Ukraine, Prosp. Nauky 46, Kyiv 03028, Ukraine
| | - O V Kliushnichenko
- Institute of Physics, National Academy of Sciences of Ukraine, Prosp. Nauky 46, Kyiv 03028, Ukraine
| | - S P Lukyanets
- Institute of Physics, National Academy of Sciences of Ukraine, Prosp. Nauky 46, Kyiv 03028, Ukraine
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David JF, Iyaniwura SA, Ward MJ, Brauer F. A novel approach to modelling the spatial spread of airborne diseases: an epidemic model with indirect transmission. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2020; 17:3294-3328. [PMID: 32987531 DOI: 10.3934/mbe.2020188] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
We formulated and analyzed a class of coupled partial and ordinary differential equation (PDE-ODE) model to study the spread of airborne diseases. Our model describes human populations with patches and the movement of pathogens in the air with linear diffusion. The diffusing pathogens are coupled to the SIR dynamics of each population patch using an integro-differential equation. Susceptible individuals become infected at some rate whenever they are in contact with pathogens (indirect transmission), and the spread of infection in each patch depends on the density of pathogens around the patch. In the limit where the pathogens are diffusing fast, a matched asymptotic analysis is used to reduce the coupled PDE-ODE model into a nonlinear system of ODEs, which is then used to compute the basic reproduction number and final size relation for different scenarios. Numerical simulations of the reduced system of ODEs and the full PDE-ODE model are consistent, and they predict a decrease in the spread of infection as the diffusion rate of pathogens increases. Furthermore, we studied the effect of patch location on the spread of infections for the case of two population patches. Our model predicts higher infections when the patches are closer to each other.
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Affiliation(s)
- Jummy F David
- Department of Mathematics, University of British Columbia, Vancouver, B.C., Canada
- Interdisciplinary Studies, University of British Columbia, Vancouver, B.C., Canada
| | - Sarafa A Iyaniwura
- Department of Mathematics, University of British Columbia, Vancouver, B.C., Canada
| | - Michael J Ward
- Department of Mathematics, University of British Columbia, Vancouver, B.C., Canada
| | - Fred Brauer
- Department of Mathematics, University of British Columbia, Vancouver, B.C., Canada
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Zhang F, Li J, Li J. Epidemic characteristics of two classic SIS models with disease-induced death. J Theor Biol 2017; 424:73-83. [PMID: 28479003 DOI: 10.1016/j.jtbi.2017.04.029] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2017] [Revised: 04/27/2017] [Accepted: 04/28/2017] [Indexed: 11/28/2022]
Abstract
The epidemic characteristics of two classic SIS epidemic models, including the epidemic size, peak and turning point, are investigated. The two SIS models are with bilinear and standard incidences, respectively. For the SIS models, the susceptible individuals generally can be divided into two classes. One consists of the individuals who had not been infected by the infection, the other are individuals who have been infected and recovered from the infection. Based on this fact, the classic SIS epidemic models need to be reformulated in order to analyze the turning points of the epidemic for various cumulative cases in detail. The obtained results illustrate how to determine the epidemic characteristics of the two models, and demonstrate their dependence on the initial conditions and the relative parameters of the models.
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Affiliation(s)
- Fengqin Zhang
- Department of Mathematics, Yuncheng University, Shanxi Yuncheng 044000, PR China.
| | - Jianquan Li
- Science College, Air Force Engineering University, Xi'an, 710051, PR China.
| | - Jia Li
- Department of Mathematical Sciences, University of Alabama in Huntsville, Huntsville, AL, USA.
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