Histology Image Viewer and Converter (HIVC): A High-Speed Freeware Software to View and Convert Whole Slide Histology Images

Iris: A Next Generation Digital Pathology Rendering Engine

Digital pathology is a tool of rapidly evolving importance within the discipline of pathology. Whole slide imaging promises numerous advantages; however, adoption is limited by challenges in ease of use and speed of high-quality image rendering relative to the simplicity and visual quality of glass slides. Herein, we introduce Iris, a new high-performance digital pathology rendering system. Specifically, we outline and detail the performance metrics of Iris Core, the core rendering engine technology. Iris Core comprises machine code modules written from the ground up in C++ and using Vulkan, a low-level and low-overhead cross-platform graphical processing unit application program interface, and our novel rapid tile buffering algorithms. We provide a detailed explanation of Iris Core's system architecture, including the stateless isolation of core processes, interprocess communication paradigms, and explicit synchronization paradigms that provide powerful control over the graphical processing unit. Iris Core achieves slide rendering at the sustained maximum frame rate on all tested platforms (120 FPS) and buffers an entire new slide field of view, without overlapping pixels, in 10 ms with enhanced detail in 30 ms. Further, it is able to buffer and compute high-fidelity reduction-enhancements for viewing low-power cytology with increased visual quality at a rate of 100-160 μs per slide tile, and with a cumulative median buffering rate of 1.36 GB of decompressed image data per second. This buffering rate allows for an entirely new field of view to be fully buffered and rendered in less than a single monitor refresh on a standard display, and high detail features within 2-3 monitor refresh frames. These metrics far exceed previously published specifications, beyond an order of magnitude in some contexts. The system shows no slowing with high use loads, but rather increases performance due to graphical processing unit cache control mechanisms and is "future-proof" due to near unlimited parallel scalability.

Mechanical, structural, and physiologic differences between above and below-knee human arteries

Peripheral Artery Disease (PAD) affects the lower extremities and frequently results in poor clinical outcomes, especially in the vessels below the knee. Understanding the biomechanical and structural characteristics of these arteries is important for improving treatment efficacy, but mechanical and structural data on tibial vessels remain limited. We compared the superficial femoral (SFA) and popliteal (PA) arteries that comprise the above-knee femoropopliteal (FPA) segment to the infrapopliteal (IPA) anterior tibial (AT), posterior tibial (PT), and fibular (FA) arteries from the same 15 human subjects (average age 52, range 42-67 years, 87 % male). Vessels were imaged using μCT, evaluated with biaxial mechanical testing and constitutive modeling, and assessed for elastin, collagen, smooth muscle cells (SMCs), and glycosaminoglycans (GAGs). IPAs were more often diseased or calcified compared to the FPAs. They were also twice smaller, 53 % thinner, and significantly stiffer than the FPA longitudinally, but not circumferentially. IPAs experienced 48 % higher physiologic longitudinal stresses (62 kPa) but 27 % lower circumferential stresses (24 kPa) and similar cardiac cycle stretch of <1.02 compared to the FPA. IPAs had lower longitudinal pre-stretch (1.12) than the FPAs (1.29), but there were no differences in the stored elastic energy during pulsation. The physiologic circumferential stiffness was similar in the above and below-knee arteries (718 kPa vs 754 kPa). Structurally, IPAs had less elastin, collagen, and GAGs than the FPA, but maintained similar SMC content. Our findings contribute to a better understanding of segment-specific human lower extremity artery biomechanics and may inform the development of better medical devices for PAD treatment. STATEMENT OF SIGNIFICANCE: Peripheral Artery Disease (PAD) in the lower extremity arteries exhibits distinct characteristics and results in different clinical outcomes when treating arteries above and below the knee. However, their mechanical, structural, and physiologic differences are poorly understood. Our study compared above- and below-knee arteries from the same middle-aged human subjects and demonstrated distinct differences in size, structure, and mechanical properties, leading to variations in their physiological behavior. These insights could pave the way for creating location-specific medical devices and treatments for PAD, offering a more effective approach to its management. Our findings provide new, important perspectives for clinicians, researchers, and medical device developers interested in treating PAD in both above- and below-knee locations.