Mitochondrial genomes of the South American electric knifefishes (Order Gymnotiformes)

Patterns of diversification and phylogenetic structure in the dorsolateral head musculature of Neotropical electric eels (Ostariophysi: Gymnotiformes), with a myological synonymy

Abstract The present study offers a broad comparative analysis of the dorsolateral head musculature in the Gymnotiformes, with detailed descriptions and illustrations of the dorsolateral head muscles of 83 species representing combined all valid genera. Results permit a detailed assessment of primary homologies and taxonomically-relevant variation across the order. This provides the basis for a myological synonymy, which organizes 33 previously proposed names for 15 recognized muscles. Morphological variation derived from dorsolateral head musculature was coded into 56 characters. When analyzed in isolation, that set of characters results in Gymnotidae as the sister group of remaining gymnotiforms, and all other currently recognized families as monophyletic groups. In a second analysis, myological characters were concatenated with other previously proposed characters into a phenotypic matrix. Results of that analysis reveal new myological synapomorphies for nearly all taxonomic categories within Gymnotiformes. A Partitioned Bremer Support (PBS) was used to asses the significance of comparative myology in elucidating phylogenetic relationships. PBS values show strongly non-uniform distributions on the tree, with positive scores skewed towards more inclusive taxa, and negative PBS values concentrated on less inclusive clades. Our results provide background for future studies on biomechanical constraints evolved in the early stages of gymnotiform evolution.

Convergent patterns of evolution of mitochondrial oxidative phosphorylation (OXPHOS) genes in electric fishes

The ability to generate and detect electric fields has evolved in several groups of fishes as a means of communication, navigation and, occasionally, predation. The energetic burden required can account for up to 20% of electric fishes' daily energy expenditure. Despite this, molecular adaptations that enable electric fishes to meet the metabolic demands of bioelectrogenesis remain unknown. Here, we investigate the molecular evolution of the mitochondrial oxidative phosphorylation (OXPHOS) complexes in the two most diverse clades of weakly electric fishes-South American Gymnotiformes and African Mormyroidea, using codon-based likelihood approaches. Our analyses reveal that although mitochondrial OXPHOS genes are generally subject to strong purifying selection, this constraint is significantly reduced in electric compared to non-electric fishes, particularly for complexes IV and V. Moreover, analyses of concatenated mitochondrial genes show strong evidence for positive selection in complex I genes on the two branches associated with the independent evolutionary origins of electrogenesis. These results suggest that adaptive evolution of proton translocation in the OXPHOS cellular machinery may be associated with the evolution of bioelectrogenesis. Overall, we find striking evidence for remarkably similar effects of electrogenesis on the molecular evolution of mitochondrial OXPHOS genes in two independently derived clades of electrogenic fishes. This article is part of the theme issue 'Linking the mitochondrial genotype to phenotype: a complex endeavour'.

Tempo and mode of allopatric divergence in the weakly electric fish Sternopygus dariensis in the Isthmus of Panama

Spatial isolation is one of the main drivers of allopatric speciation, but the extent to which spatially-segregated populations accumulate genetic differences relevant to speciation is not always clear. We used data from ultraconserved elements (UCEs) and whole mitochondrial genomes (i.e., mitogenomes) to explore genetic variation among allopatric populations of the weakly electric fish Sternopygus dariensis across the Isthmus of Panama. We found strong genetic divergence between eastern and western populations of S. dariensis. Over 77% of the UCE loci examined were differentially fixed between populations, and these loci appear to be distributed across the species' genome. Population divergence occurred within the last 1.1 million years, perhaps due to global glaciation oscillations during the Pleistocene. Our results are consistent with a pattern of genetic differentiation under strict geographic isolation, and suggest the presence of incipient allopatric species within S. dariensis. Genetic divergence in S. dariensis likely occurred in situ, long after the closure of the Isthmus of Panama. Our study highlights the contribution of spatial isolation and vicariance to promoting rapid diversification in Neotropical freshwater fishes. The study of spatially-segregated populations within the Isthmus of Panama could reveal how genetic differences accumulate as allopatric speciation proceeds.

A taxonomic revision of the Neotropical electric fish genus Brachyhypopomus (Ostariophysi: Gymnotiformes: Hypopomidae), with descriptions of 15 new species

ABSTRACT The bluntnose knifefish genus BrachyhypopomusMago-Leccia, 1994, is diagnosed from other Rhamphichthyoidea (Rhamphichthyidae + Hypopomidae) by the presence of a disk-like ossification in the anterior portion of the palatoquadrate, and by the following external characters: short snout, 18.7-32.6% of head length (vs. 33.3-68.6% in Hypopomus, Gymnorhamphichthys, Iracema, and Rhamphichthys), absence of a paired accessory electric organ in the mental or humeral region (vs. presence in Hypopygus and Steatogenys), presence of 3-4 pectoral proximal radials (vs. 5 in Akawaio), presence of the antorbital + infraorbital, and the preopercular cephalic lateral line canal bones (vs. absence in Racenisia). Brachyhypopomus cannot be diagnosed unambiguously from Microsternarchus or from Procerusternarchus on the basis of external characters alone. Brachyhypopomus comprises 28 species. Here we describe 15 new species, and provide redescriptions of all 13 previously described species, based on meristic, morphometric, and other morphological characters. We include notes on ecology and natural history for each species, and provide regional dichotomous keys and distribution maps, based on the examination of 12,279 specimens from 2,787 museum lots. A lectotype is designated for Brachyhypopomus pinnicaudatus (Hopkins, Comfort, Bastian & Bass, 1990). Brachyhypopomus species are abundant in shallow lentic and slow-flowing freshwater habitats from southern Costa Rica and northern Venezuela to Uruguay and northern Argentina. Species diversity is highest in Greater Amazonia, where 20 species occur: B. alberti, new species, B. arrayae, new species, and B. cunia, new species, in the upper rio Madeira drainage; B. batesi, new species, in the central Amazon and rio Negro; B. beebei, B. brevirostris, B. regani, new species, B. sullivani, new species, and B. walteri, widespread through the Amazon and Orinoco basins and the Guianas; B. belindae, new species, in the central Amazon basin; B. benjamini, new species, and B. verdii, new species, in the upper Amazon basin; B. bennetti, in the upper, central, and lower Amazon, lower Tocantins, and upper Madeira basins; B. bullocki in the Orinoco, Negro and Essequibo drainages; B. diazi in the Orinoco Llanos; B. flavipomus, new species, and B. hamiltoni, new species, in the central and upper Amazon basin; B. hendersoni, new species, in the central Amazon, lower Negro and Essequibo basins; B. pinnicaudatus in the central and lower Amazon, lower, upper Madeira, lower Tocantins and Mearim basins, and coastal French Guiana; and B. provenzanoi, new species, in the upper Orinoco and upper Negro basins. Five species are known from the Paraná-Paraguay-Uruguay basin and adjacent southern Atlantic drainages: B. bombilla in the lower Paraná, upper, central, and lower Paraguay, Uruguay and Patos-Mirim drainages; B. brevirostris in the upper Paraguay basin; B. draco in the lower Paraná, lower Paraguay, Uruguay, Patos-Mirim, and Tramandaí basins; B. gauderio in the lower Paraná, upper, central, and lower Paraguay, Uruguay, Patos-Mirim and Tramandaí basins; and B. walteri in the lower Paraná and upper Paraguay basins. Two species occur in small Atlantic drainages of southern Brazil: B. janeiroensis in the São João, Paraíba and small intervening drainages; and B. jureiae in the Ribeira de Iguape and Una do Prelado. One species occurs in the middle and upper São Francisco basin: B. menezesi, new species. Three species occur in trans-Andean drainages: B. diazi in Caribbean drainages of northern Venezuela; B. occidentalis in Atlantic and Pacific drainages of southern Costa Rica and Panama to Darién, and the Maracaibo, Magdalena, Sinú and Atrato drainages; and B. palenque, new species, in Pacific drainages of Ecuador.