Detection of motion artifact patterns in photoplethysmographic signals based on time and period domain analysis

Quantifying the accuracy of inter-beat intervals acquired from consumer-grade photoplethysmography wristbands using an electrocardiogram-aided information-based similarity approach

Objective. Although inter-beat intervals (IBI) and the derived heart rate variability (HRV) can be acquired through consumer-grade photoplethysmography (PPG) wristbands and have been applied in a variety of physiological and psychophysiological conditions, their accuracy is still unsatisfactory.Approach.In this study, 30 healthy participants concurrently wore two wristbands (E4 and Honor 5) and a gold-standard electrocardiogram (ECG) device under four conditions: resting, deep breathing with a frequency of 0.17 Hz and 0.1 Hz, and mental stress tasks. To quantitatively validate the accuracy of IBI acquired from PPG wristbands, this study proposed to apply an information-based similarity (IBS) approach to quantify the pattern similarity of the underlying dynamical temporal structures embedded in IBI time series simultaneously recorded using PPG wristbands and the ECG system. The occurrence frequency of basic patterns and their rankings were analyzed to calculate the IBS distance from gold-standard IBI, and to further calculate the signal-to-noise ratio (SNR) of the wristband IBI time series.Main results.The accuracies of both HRV and mental state classification were not satisfactory due to the low SNR in the wristband IBI. However, by rejecting data segments of SNR < 25, the Pearson correlation coefficients between the wristbands' HRV and the gold-standard HRV were increased from 0.542 ± 0.235 to 0.922 ± 0.120 for E4 and from 0.596 ± 0.227 to 0.859 ± 0.145 for Honor 5. The average accuracy of four-class mental state classification increased from 77.3% to 81.9% for E4 and from 79.3% to 83.3% for Honor 5.Significance.Consumer-grade PPG wristbands are acceptable for HR and HRV monitoring when removing low SNR segments. The proposed method can be applied for quantifying the accuracies of IBI and HRV indices acquired via any non-ECG system.

Artifacts classification and apnea events detection in neck photoplethysmography signals

The novel pulse oximetry measurement site of the neck is a promising location for multi-modal physiological monitoring. Specifically, in the context of respiratory monitoring, in which it is important to have direct information about airflow. The neck makes this possible, in contrast to common photoplethysmography (PPG) sensing sites. However, this PPG signal is susceptible to artifacts that critically impair the signal quality. To fully exploit neck PPG for reliable physiological parameters extraction and apneas monitoring, this paper aims to develop two classification algorithms for artifacts and apnea detection. Features from the time, correlogram, and frequency domains were extracted. Two SVM classifiers with RBF kernels were trained for different window (W) lengths and thresholds (Thd) of corruption. For artifacts classification, the maximum performance was attained for the parameters combination of [W = 6s-Thd= 20%], with an average accuracy= 85.84%(ACC), sensitivity= 85.43%(SE) and specificity= 86.26%(SP). For apnea detection, the model [W = 10s-Thd= 50%] maximized all the performance metrics significantly (ACC= 88.25%, SE= 89.03%, SP= 87.42%). The findings of this proof of concept are significant for denoising novel neck PPG signals, and demonstrate, for the first time, that it is possible to promptly detect apnea events from neck PPG signals in an instantaneous manner. This could make a big impact in crucial real-time applications, like devices to prevent sudden-unexpected-death-in-epilepsy (SUDEP).

Signal Quality Assessment of Photoplethysmogram Signals using Quantum Pattern Recognition Technique and lightweight CNN Module

Photoplethysmography (PPG) signal comprises physiological information related to cardiorespiratory health. High-quality PPG signals are necessary to extract cardiores-piratory information accurately. Motion artifacts can easily corrupt PPG signals due to human locomotion, leading to noise enriched, poor quality signals. Several rule-based and Machine-Learning (ML) - based approaches for PPG signal quality estimation are available, but those algorithms' efficacy is questionable. So, the authors propose a lightweight CNN architecture for signal quality assessment by employing a novel Quantum Pattern Recognition (QPR) technique. The proposed algorithm is validated on manually annotated data obtained from the University of Queensland database. A total of 28366, 5s signal segments are preprocessed and transformed into image files of 20 x 500 pixels for input to the 2D CNN architecture. The developed model classifies the PPG signal as 'good' and 'bad' with an accuracy of 98.3% with 99.3% sensitivity, 94.5% specificity and 98.9% F1-score. The experimental analysis concludes that slim module based architecture and novel Spatio-temporal pattern recognition technique improve the system's performance. The proposed approach is suitable for a resource-constrained wearable implementation.

Wearable Photoplethysmography for Cardiovascular Monitoring

Smart wearables provide an opportunity to monitor health in daily life and are emerging as potential tools for detecting cardiovascular disease (CVD). Wearables such as fitness bands and smartwatches routinely monitor the photoplethysmogram signal, an optical measure of the arterial pulse wave that is strongly influenced by the heart and blood vessels. In this survey, we summarize the fundamentals of wearable photoplethysmography and its analysis, identify its potential clinical applications, and outline pressing directions for future research in order to realize its full potential for tackling CVD.

Signal Quality Assessment of PPG Signals using STFT Time-Frequency Spectra and Deep Learning Approaches

Photoplethysmography (PPG) is an important signal which contains much physiological information like heart rate and cardiovascular health etc. However, PPG signals are easily corrupted by motion artifacts and body movements during their recordings, which may lead to poor quality. In order to accurately extract cardiovascular information, it is necessary to ensure high PPG quality in these applications. Although there are several existed methods to get the PPG signal quality, those algorithms are complex and the accuracies are not very high. Thus, this work proposes a deep learning network for the signal quality assessment using the STFT time-frequency spectra. A total of 5804 10s signals are preprocessed and transformed into 2D STFT spectra with 250 × 334 pixels. The STFT figures are as the input of the CNN networks, and the model gives the result as good or bad quality. The model accuracy is 98.3% with 98.9% sensitivity, 96.7% specificity, and 98.8% F1-score. And the heart rate error is much reduced after classification with the reference of ECG signals. Thus, the proposed deep learning approaches can be useful in the classification of good and bad PPG signals. As far as we know, this is the first article using deep learning methods combined with STFT time-frequency spectra to get the signal quality assessment of PPG signals.

Comparison of Pulse Wave Signal Monitoring Techniques with Different Fiber-Optic Interferometric Sensing Elements

Pulse wave (PW) measurement is a highly prominent technique, used in biomedical diagnostics. Development of novel PW sensors with increased accuracy and reduced susceptibility to motion artifacts will pave the way to more advanced healthcare technologies. This paper reports on a comparison of performance of fiber optic pulse wave sensors, based on Fabry–Perot interferometer, fiber Bragg grating, optical coherence tomography (OCT) and singlemode-multimode-singlemode intermodal interferometer. Their performance was tested in terms of signal to noise ratio, repeatability of demodulated signals and suitability of demodulated signals for extraction of information about direct and reflected waves. It was revealed that the OCT approach of PW monitoring provided the best demodulated signal quality and was most robust against motion artifacts. Advantages and drawbacks of all compared PW measurement approaches in terms of practical questions, such as multiplexing capabilities and abilities to be interrogated by portable hardware are discussed.

Robust PPG motion artifact detection using a 1-D convolution neural network

BACKGROUND AND OBJECTIVES

Continuous monitoring of physiological parameters such as photoplethysmography (PPG) has attracted increased interest due to advances in wearable sensors. However, PPG recordings are susceptible to various artifacts, and thus reducing the reliability of PPG-driven parameters, such as oxygen saturation, heart rate, blood pressure and respiration. This paper proposes a one-dimensional convolution neural network (1-D-CNN) to classify five-second PPG segments into clean or artifact-affected segments, avoiding data-dependent pulse segmentation techniques and heavy manual feature engineering.

METHODS

Continuous raw PPG waveforms were blindly allocated into segments with an equal length (5s) without leveraging any pulse location information and were normalized with Z-score normalization methods. A 1-D-CNN was designed to automatically learn the intrinsic features of the PPG waveform, and perform the required classification. Several training hyperparameters (initial learning rate and gradient threshold) were varied to investigate the effect of these parameters on the performance of the network. Subsequently, this proposed network was trained and validated with 30 subjects, and then tested with eight subjects, with our local dataset. Moreover, two independent datasets downloaded from the PhysioNet MIMIC II database were used to evaluate the robustness of the proposed network.

RESULTS

A 13 layer 1-D-CNN model was designed. Within our local study dataset evaluation, the proposed network achieved a testing accuracy of 94.9%. The classification accuracy of two independent datasets also achieved satisfactory accuracy of 93.8% and 86.7% respectively. Our model achieved a comparable performance with most reported works, with the potential to show good generalization as the proposed network was evaluated with multiple cohorts (overall accuracy of 94.5%).

CONCLUSION

This paper demonstrated the feasibility and effectiveness of applying blind signal processing and deep learning techniques to PPG motion artifact detection, whereby manual feature thresholding was avoided and yet a high generalization ability was achieved.

A Supervised Approach to Robust Photoplethysmography Quality Assessment

Early detection of Atrial Fibrillation (AFib) is crucial to prevent stroke recurrence. New tools for monitoring cardiac rhythm are important for risk stratification and stroke prevention. As many of new approaches to long-term AFib detection are now based on photoplethysmogram (PPG) recordings from wearable devices, ensuring high PPG signal-to-noise ratios is a fundamental requirement for a robust detection of AFib episodes. Traditionally, signal quality assessment is often based on the evaluation of similarity between pulses to derive signal quality indices. There are limitations to using this approach for accurate assessment of PPG quality in the presence of arrhythmia, as in the case of AFib, mainly due to substantial changes in pulse morphology. In this paper, we first tested the performance of algorithms selected from a body of studies on PPG quality assessment using a dataset of PPG recordings from patients with AFib. We then propose machine learning approaches for PPG quality assessment in 30-s segments of PPG recording from 13 stroke patients admitted to the University of California San Francisco (UCSF) neuro intensive care unit and another dataset of 3764 patients from one of the five UCSF general intensive care units. We used data acquired from two systems, fingertip PPG (fPPG) from a bedside monitor system, and radial PPG (rPPG) measured using a wearable commercial wristband. We compared various supervised machine learning techniques including k-nearest neighbors, decisions trees, and a two-class support vector machine (SVM). SVM provided the best performance. fPPG signals were used to build the model and achieved 0.9477 accuracy when tested on the data from the fPPG exclusive to the test set, and 0.9589 accuracy when tested on the rPPG data.

Noninvasive Blood Pressure Classification Based on Photoplethysmography Using K-Nearest Neighbors Algorithm: A Feasibility Study

Blood pressure (BP) is an important parameter for the early detection of heart disease because it is associated with symptoms of hypertension or hypotension. A single photoplethysmography (PPG) method for the classification of BP can automatically analyze BP symptoms. Users can immediately know the condition of their BP to ensure early detection. In recent years, deep learning methods have presented outstanding performance in classification applications. However, there are two main problems in deep learning classification methods: classification accuracy and time consumption during training. We attempt to address these limitations and propose a method for the classification of BP using the K-nearest neighbors (KNN) algorithm based on PPG. We collected data for 121 subjects from the PPG–BP figshare database. We divided the subjects into three classification levels, namely normotension, prehypertension, and hypertension, according to the BP levels of the Joint National Committee report. The F1 scores of these three classification trials were 100%, 100%, and 90.80%, respectively. Hence, it is validated that the proposed method can achieve improved classification accuracy without additional manual pre-processing of PPG. Our proposed method achieves higher accuracy than convolutional neural networks (deep learning), bagged tree, logistic regression, and AdaBoost tree.

How to Measure Sedentary Behavior at Work?

Background: Prolonged sedentary behavior (SB) is associated with increased risk for chronic conditions. A growing number of the workforce is employed in office setting with high occupational exposure to SB. There is a new focus in assessing, understanding and reducing SB in the workplace. There are many subjective (questionnaires) and objective methods (monitoring with wearable devices) available to determine SB. Therefore, we aimed to provide a global understanding on methods currently used for SB assessment at work.

Methods: We carried out a systematic review on methods to measure SB at work. Pubmed, Cochrane, Embase, and Web of Science were searched for peer-reviewed English-language articles published between 1st January 2000 and 17th March 2019.

Results: We included 154 articles: 89 were cross-sectional and 65 were longitudinal studies, for a total of 474,091 participants. SB was assessed by self-reported questionnaires in 91 studies, by wearables devices in also 91 studies, and simultaneously by a questionnaire and wearables devices in 30 studies. Among the 91 studies using wearable devices, 73 studies used only one device, 15 studies used several devices, and three studies used complex physiological systems. Studies exploring SB on a large sample used significantly more only questionnaires and/or one wearable device.

Conclusions: Available questionnaires are the most accessible method for studies on large population with a limited budget. For smaller groups, SB at work can be objectively measured with wearable devices (accelerometers, heart-rate monitors, pressure meters, goniometers, electromyography meters, gas-meters) and the results can be associated and compared with a subjective measure (questionnaire). The number of devices worn can increase the accuracy but make the analysis more complex and time consuming.

Current progress of photoplethysmography and SPO2 for health monitoring

A photoplethysmograph (PPG) is a simple medical device for monitoring blood flow and transportation of substances in the blood. It consists of a light source and a photodetector for measuring transmitted and reflected light signals. Clinically, PPGs are used to monitor the pulse rate, oxygen saturation, blood pressure, and blood vessel stiffness. Wearable unobtrusive PPG monitors are commercially available. Here, we review the principle issues and clinical applications of PPG for monitoring oxygen saturation.

Design and Implementation of Respiration Rate Measurement System Using an Information Filter on an Embedded Device

In this work, an algorithm was developed to measure respiration rate for an embedded device that can be used by a field robot for relief operations. With this algorithm, the rate measurement was calculated based on direct influences of respiratory-induced intensity variation (RIIV) on blood flow in cardiovascular pathways. For this, a photoplethysmogram (PPG) sensor was used to determine changes in heartbeat frequencies. The PPG sensor readings were filtered using an Information Filter and a fast Fourier transform (FFT) to determine the state of RIIV. With a relatively light initialization, the information filter can estimate unknown variables based on a series of measurements containing noise and other inaccuracies. Therefore, this filter is suitable for application in an embedded device. For faster calculation time in the implementation, the FFT analysis was calculated only for a major peak in frequency domain. Test and measurement of respiration rate was conducted based on the device algorithm and spirometer. Heartbeat measurements were also evaluated by comparing the heartbeat data of the PPG sensor and pulse-oximeter. Based on the test, the implemented algorithm can measure the respiration rate with approximately 80% accuracy compared with the spirometer.

Characterization Study of Neck Photoplethysmography

This paper presents a comparison between finger and neck photoplethysmography (PPG) in order to assess the potential and limitations of this, non-conventionally used, body site for application in pulse oximetry. PPG signals were recorded at both sites from healthy subjects to inspect the differences in average waveforms, as well as in oxygen saturation (SpO₂) and heart rate (HR) estimation. The results show significant differences in the average PPG pulse waveforms for different contour features such as diastolic or dicrotic notch amplitude, among others. The results show that the HR estimated from signals obtained with the neck sensor are strongly correlated to the output of the reference finger (R=0.862, MAE=1.27 BPM), whereas SpO₂ measurements are not that accurately predicted (R=0.129, MAE=11.7%). Spectrograms under different breathing conditions revealed that the respiratory frequency is more predominant in neck PPG than in finger, which has a great potential for respiratory rate (RR) extraction. These are very promising results for the suitability of the neck as an alternative location for monitoring of respiratory diseases, and specifically for sleep apnea.

Adaptive template matching of photoplethysmogram pulses to detect motion artefact

OBJECTIVE

The photoplethysmography (PPG) signal, commonly used in the healthcare settings, is easily affected by movement artefact leading to errors in the extracted heart rate and SpO₂ estimates. This study aims to develop an online artefact detection system based on adaptive (dynamic) template matching, suitable for continuous PPG monitoring during daily living activities or in the intensive care units (ICUs).

APPROACH

Several master templates are initially generated by applying principal component analysis to data obtained from the PhysioNet MIMIC II database. The master template is then updated with each incoming clean PPG pulse. The correlation coefficient is used to classify the PPG pulse into either good or bad quality categories. The performance of our algorithm was evaluated using data obtained from two different sources: (i) our own data collected from 19 healthy subjects using the wearable Sotera Visi Mobile system (Sotera Wireless Inc.) as they performed various movement types; and (ii) ICU data provided by the PhysioNet MIMIC II database. The developed algorithm was evaluated against a manually annotated 'gold standard' (GS).

MAIN RESULTS

Our algorithm achieved an overall accuracy of 91.5%  ±  2.9%, with a sensitivity of 94.1%  ±  2.7% and a specificity of 89.7%  ±  5.1%, when tested on our own data. When applying the algorithm to data from the PhysioNet MIMIC II database, it achieved an accuracy of 98.0%, with a sensitivity and specificity of 99.0% and 96.1%, respectively.

SIGNIFICANCE

The proposed method is simple and robust against individual variations in the PPG characteristics, thus making it suitable for a diverse range of datasets. Integration of the proposed artefact detection technique into remote monitoring devices could enhance reliability of the PPG-derived physiological parameters.

Quantifying Movement in Preterm Infants Using Photoplethysmography

Long-term recordings of movement in preterm infants might reveal important clinical information. However, measurement of movement is limited because of time-consuming and subjective analysis of video or reluctance to attach additional sensors to the infant. We evaluated whether photoplethysmogram (PPG), routinely used for oximetry in preterm infants in the neonatal intensive care unit (NICU), can provide reliable long-term measurements of movement. In 18 infants [mean post-conceptional age (PCA) 31.10 weeks, range 29-34.29 weeks], we designed and tested a wavelet-based algorithm that detects movement signals from the PPG. The algorithm's performance was optimized relative to subjective assessments of movement using video and accelerometers attached to two limbs and force sensors embedded within the mattress (five infants, three raters). We then applied the optimized algorithm to infants receiving routine care in the NICU without additional sensors. The algorithm revealed a decline in brief movements (< 5 s) with increasing PCA (13 infants, r = - 0.87, p < 0.001, PCA range 27.3-33.9 weeks). Our findings suggest that quantitative relationships between motor activity and clinical outcomes in preterm infants can be studied using routine photoplethysmography.

SeismoWatch: Wearable Cuffless Blood Pressure Monitoring Using Pulse Transit Time

The current norm for measuring blood pressure (BP) at home is using an automated BP cuff based on oscillometry. Despite providing a viable and familiar method of tracking BP at home, oscillometric devices can be both cumbersome and inaccurate with the inconvenience of the hardware typically limiting measurements to once or twice per day. To address these limitations, a wrist-watch BP monitor was developed to measure BP through a simple maneuver: holding the watch against the sternum to detect micro-vibrations of the chest wall associated with the heartbeat. As a pulse wave propagates from the heart to the wrist, an accelerometer and optical sensor on the watch measure the travel time - pulse transit time (PTT) - to estimate BP. In this paper, we conducted a study to test the accuracy and repeatability of our device. After calibration, the diastolic pressure estimations reached a root-mean-square error of 2.9 mmHg. The watch-based system significantly outperformed (p<0.05) conventional pulse arrival time (PAT) based wearable blood pressure estimations - the most commonly used method for wearable BP sensing in the existing literature and commercial devices. Our device can be a convenient means for wearable BP monitoring outside of clinical settings in both health-conscious and hypertensive populations.1.

An unsupervised learning for robust cardiac feature derivation from PPG signals

We propose here derivation algorithms for physiological parameters like beat start point, systolic peak, pulse duration, peak-to-peak distance related to heart rate, dicrotic minima, diastolic peak from Photoplethysmogram (PPG) signals robustly. Our methods are based on unsupervised learning mainly following morphology as well as discrete nature of the signal. Statistical learning has been used as a special aid to infer most probable feature values mainly to cope up with presence of noise, which is assumed to be insignificant compared to signal values at each investigation window. Performance of the proposed method is found to be better than other standard methods, yielding precision and sensitivity more than 97% obtained from three real life data sets.

SVM-Based Spectral Analysis for Heart Rate from Multi-Channel WPPG Sensor Signals

Although wrist-type photoplethysmographic (hereafter referred to as WPPG) sensor signals can measure heart rate quite conveniently, the subjects’ hand movements can cause strong motion artifacts, and then the motion artifacts will heavily contaminate WPPG signals. Hence, it is challenging for us to accurately estimate heart rate from WPPG signals during intense physical activities. The WWPG method has attracted more attention thanks to the popularity of wrist-worn wearable devices. In this paper, a mixed approach called Mix-SVM is proposed, it can use multi-channel WPPG sensor signals and simultaneous acceleration signals to measurement heart rate. Firstly, we combine the principle component analysis and adaptive filter to remove a part of the motion artifacts. Due to the strong relativity between motion artifacts and acceleration signals, the further denoising problem is regarded as a sparse signals reconstruction problem. Then, we use a spectrum subtraction method to eliminate motion artifacts effectively. Finally, the spectral peak corresponding to heart rate is sought by an SVM-based spectral analysis method. Through the public PPG database in the 2015 IEEE Signal Processing Cup, we acquire the experimental results, i.e., the average absolute error was 1.01 beat per minute, and the Pearson correlation was 0.9972. These results also confirm that the proposed Mix-SVM approach has potential for multi-channel WPPG-based heart rate estimation in the presence of intense physical exercise.

Assessment of cardiovascular function from multi-Gaussian fitting of a finger photoplethysmogram

Monitoring of cardiovascular function on a beat-to-beat basis is fundamental for protecting patients in different settings including emergency medicine and interventional cardiology, but still faces technical challenges and several limitations. In the present study, we propose a new method for the extraction of cardiovascular performance surrogates from analysis of the photoplethysmographic (PPG) signal alone.We propose using a multi-Gaussian (MG) model consisting of five Gaussian functions to decompose the PPG pulses into its main physiological components. From the analysis of these components, we aim to extract estimators of the left ventricular ejection time, blood pressure and vascular tone changes. Using a multi-derivative analysis of the components related with the systolic ejection, we investigate which are the characteristic points that best define the left ventricular ejection time (LVET). Six LVET estimates were compared with the echocardiographic LVET in a database comprising 68 healthy and cardiovascular diseased volunteers. The best LVET estimate achieved a low absolute error (15.41   ±   13.66 ms), and a high correlation (ρ = 0.78) with the echocardiographic reference.To assess the potential use of the temporal and morphological characteristics of the proposed MG model components as surrogates for blood pressure and vascular tone, six parameters have been investigated: the stiffness index (SI), the T1_d and T1_2 (defined as the time span between the MG model forward and reflected waves), the reflection index (RI), the R1_d and the R1_2 (defined as their amplitude ratio). Their association to reference values of blood pressure and total peripheral resistance was investigated in 43 volunteers exhibiting hemodynamic instability. A good correlation was found between the majority of the extracted and reference parameters, with an exception to R1_2 (amplitude ratio between the main forward wave and the first reflection wave), which correlated low with all the reference parameters. The highest correlation ([Formula: see text] = 0.45) was found between T1_2 and the total peripheral resistance index (TPRI); while in the patients that experienced syncope, the highest agreement ([Formula: see text] = 0.57) was found between SI and systolic blood pressure (SBP) and mean blood pressure (MBP).In conclusion, the presented method for the extraction of surrogates of cardiovascular performance might improve patient monitoring and warrants further investigation.

Real-Time Prediction of Neurally Mediated Syncope

Neurally mediated syncope (NMS) patients suffer from sudden loss of consciousness, which is associated with a high rate of falls and hospitalization. NMS negatively impacts a subject's quality of life and is a growing cost issue in our aging society, as its incidence increases with age. In this paper, we present a solution for prediction of NMS, which is based on the analysis of the electrocardiogram (ECG) and photoplethysmogram (PPG) alone. Several parameters extracted from ECG and PPG, associated with reflectory mechanisms underlying NMS in previous publications, were combined in a single algorithm to detect impending syncope. The proposed algorithm was evaluated in a population of 43 subjects. The feature selection, distance metric selection, and optimal threshold were performed in a subset of 30 patients, while the remaining data from 13 patients were used to test the final solution. Additionally, a leave-one-out cross-validation scheme was also used to evaluate the performance of the proposed algorithm yielding the following results: sensitivity (SE)--95.2%; specificity (SP)--95.4%; positive predictive value (PPV)--90.9%; false-positive rate per hour (FPRh)-0.14 h(-1), and prediction time (aPTime)--116.4 s.