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Complete Annotated Genome Sequence of the Salmonella enterica Serovar Typhimurium LT7 Strain STK003, Historically Used in Gene Transfer Studies. Microbiol Resour Announc 2021; 10:10/10/e01217-20. [PMID: 33707333 PMCID: PMC7953296 DOI: 10.1128/mra.01217-20] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
The genome of Salmonella enterica serovar Typhimurium LT7 comprises a chromosome and two plasmids. One plasmid is very close to pSLT of Salmonella Typhimurium LT2; the second harbors a shufflon region. Prophage content is distinct: LT7 lacks Fels-1, while Gifsy-1 and Fels-2 show island-like divergence and likely programmed inversion, respectively. The genome of Salmonella enterica serovar Typhimurium LT7 comprises a chromosome and two plasmids. One plasmid is very close to pSLT of Salmonella Typhimurium LT2; the second harbors a shufflon region. Prophage content is distinct: LT7 lacks Fels-1, while Gifsy-1 and Fels-2 show island-like divergence and likely programmed inversion, respectively.
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Abstract
Experimental dissection of bacterial genomes requires a well-developed set of genetic tools, but many bacteria lack the essential tools required for genetic analysis. Recombination of a region of chromosomal DNA from poorly characterized donor bacteria with the chromosome of a suitable surrogate host creates a genetically malleable hybrid, providing a short-cut for the detailed genetic analysis of the substituted genes. However, recombination between closely related but nonidentical DNA sequences ("homeologous recombination") is strongly inhibited, posing a powerful barrier to gene exchange between bacteria and a major impediment to the construction of genetic hybrids. By taking advantage of mutS and recD mutant recipients, it is possible to effectively overcome the recombination barrier, allowing construction of genetic hybrids in a related surrogate host. Once stably recombined into the recipient chromosome, the donor DNA can be studied with all the genetic tools available in the surrogate host. In addition to facilitating standard genetic analysis, use of a surrogate host can provide novel approaches to study the physiological roles of unique genes from poorly characterized bacteria.
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Affiliation(s)
- S Maloy
- Department of Microbiology, University of Illinois, B103 Chemical and Life Sciences Laboratory, 601 South Goodwin Avenue, Urbana, Illinois 61801, USA.
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KRISHNAPILLAI V, BARON LS. ALTERATIONS IN THE MOUSE VIRULENCE OF SALMONELLA TYPHIMURIUM BY GENETIC RECOMBINATION. J Bacteriol 1996; 87:598-605. [PMID: 14127576 PMCID: PMC277060 DOI: 10.1128/jb.87.3.598-605.1964] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Krishnapillai, V. (Walter Reed Army Institute of Research, Washington, D.C.), and L. S. Baron. Alterations in the mouse virulence of Salmonella typhimurium by genetic recombination. J. Bacteriol. 87:598-605. 1964.-The genetic basis of mouse virulence was investigated with an avirulent strain of Salmonella abony as chromosomal donor and a virulent strain of S. typhimurium as recipient in recombination experiments. In these genetic crosses, the transfer of partial avirulence was found to segregate among the hybrids that were examined. At least two determinants controlling avirulence were depicted to account for the partial avirulence of the hybrids. One of these determinants is indicated as being in the region of the locus for streptomycin sensitivity or resistance, and the other was adjacent to the locus for inositol utilization. Moreover, both determinants were essential for the phenotypic expression of complete avirulence in a hybrid. This was established by the results of experiments in which an initial, partially avirulent hybrid was backcrossed with the S. abony donor so that it further received the additional determinant.
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JOHNSON EM, FALKOW S, BARON LS. RECIPIENT ABILITY OF SALMONELLA TYPHOSA IN GENETIC CROSSES WITH ESCHERICHIA COLI. J Bacteriol 1996; 87:54-60. [PMID: 14102874 PMCID: PMC276961 DOI: 10.1128/jb.87.1.54-60.1964] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Johnson, E. M. (Walter Reed Army Institute of Research, Washington, D.C.), Stanley Falkow, and L. S. Baron. Recipient ability of Salmonella typhosa in genetic crosses with Escherichia coli. J. Bacteriol. 87:54-60. 1964.-Salmonella typhosa strain 643WS(r) was mated with Escherichia coli Hfr strains W1895 and Hayes, with single marker selection for the E. coli genes lac(+) (lactose utilization) and ara(+) (arabinose utilization). Four classes of Salmonella hybrids were obtained, each class possessing one marker derived from one E. coli parent. In a series of eight genetic crosses, in which each hybrid class was remated with each of the Hfr strains, recipient ability of the hybrids was increased only when their substituted E. coli genetic section matched the lead region of the Hfr chromosome. Data obtained from replica plating indicated that the S. typhosa 643WS(r) population is probably homogeneous with respect to its initial ability to mate with E. coli. Transfer of the F-lac element was found to occur only slightly less efficiently from an E. coli F' donor to S. typhosa than it did to an E. coli F(-) strain. This indicated that E. coli is able to conjugate almost as effectively with S. typhosa as it does intraspecifically. However, failure to detect beta-galactosidase production by merozygotes derived from an E. coli Hfr W1895 x S. typhosa mating indicated that transfer of chromosomal lac(+) may be impaired.
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Snellings NJ, Johnson EM, Kopecko DJ, Collins HH, Baron LS. Genetic regulation of variable Vi antigen expression in a strain of Citrobacter freundii. J Bacteriol 1981; 145:1010-7. [PMID: 6161917 PMCID: PMC217211 DOI: 10.1128/jb.145.2.1010-1017.1981] [Citation(s) in RCA: 29] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023] Open
Abstract
Certain strains of the genus Citrobacter exhibit a variable expression of the Vi surface antigen that appears to involve a special mechanism for regulation of gene expression. Two nonlinked chromosomal loci, viaA and viaB, are known to determine nonvariable Vi antigen expression in strains of Salmonella. To confirm the presence of analogous loci in Citrobacter and to ascertain whether either of them is involved in variable Vi antigen expression in this organism, donor strains were constructed from Citrobacter freundii WR7004 and used to transfer their Vi antigen-determining genes to ViaA- and ViaB- Salmonella typhi recipient strains. Vi antigen expression in C. freundii was found to be controlled by loci analogous to the Salmonella via genes. S. typhi recipients of the C. freundii viaA+ genes were restored to the full, continuous expression of the Vi antigen normally seen in S. typhi. Thus, the C. freundii viaA genes appeared to play no role in the variable expression of the Vi antigen. In contrast, S. typhi recipients of the C. freundii viaB+ genes exhibited the rapid, reversible alternation between full Vi antigen expression and markedly reduced Vi antigen expression that was seen to occur in the C. freundii parent. The C. freundii viaB locus was thus identified as the one whose genes are regulated so as to produce variable Vi antigen expression. Genes determining another C. freundii surface antigen, the synthesis of which is not affected by the mechanism regulating Vi expression, were coinherited with the C. freundii viaB+ genes. An invertible, insertion sequence element located within the C. freundii viaB locus is proposed to account for the regulation of variable Vi antigen expression.
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Snellings NJ, Johnson EM, Baron LS. Genetic basis of Vi antigen expression in Salmonella paratyphi C. J Bacteriol 1977; 131:57-62. [PMID: 68953 PMCID: PMC235390 DOI: 10.1128/jb.131.1.57-62.1977] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022] Open
Abstract
Analysis of hybrids formed in a cross between a Salmonella paratyphi C Hfr and an S. typhimurium recipient indicated that the structural genetic determinants of the S. paratyphi C Vi antigen are located closely adjacent to the mel determinant, between this marker and purA. A similar location was indicated for the structural genetic determinants of the S. typhi Vi antigen (the viaB locus) by the results of a mating in which a hybrid S. typhimurium Hfr bearing the S. typhi viaB determinants was used to transfer these genes to an S. typhimurium recipient. Mating experiments with a Vi-antigen-expressing S. typhi Hfr and an S. typhimurium hybrid recipient expressing the Vi antigen of S. paratyphi C yielded no recombinants in which loss of Vi antigen expression occurred, indicating that the chromosomal locus occupied by the genetic determinants of the S. paratyphi C Vi antigen is the same one at which, in S. typhi, the viaB genes reside. Introduction of a mutant S. typhi viaA gene into an S. typhimurium hybrid expressing the Vi antigen, as the consequence of prior receipt of the S. paratyphi C viaB determinants, resulted in that hybrid's loss of Vi antigen expression, demonstrating that the viaA determinant plays a role in Vi antigen expression in S. paratyphi C, as well as in S. typhi. Although the percentages of coinheritance of the viaB and mel determinants in the mating experiments suggested that their linkage is sufficiently close to allow cotransduction by P22, attempts to accomplish this with lysates prepared on S. typhimurium hybrids expressing either S. typhi or S. paratyphi C viaB determinants were not successful.
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Orskov I, Nyman K. Genetic mapping of the antigenic determinants of two polysaccharide K antigens, K10 and K54, in Escherichia coli. J Bacteriol 1974; 120:43-51. [PMID: 4138850 PMCID: PMC245728 DOI: 10.1128/jb.120.1.43-51.1974] [Citation(s) in RCA: 30] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023] Open
Abstract
The genes controlling synthesis of the Escherichia coli acidic polysaccharide capsular antigens K10 and K54 were transferred by conjugation to E. coli strains of other serotypes. The genes concerned with these K antigen determinants showed genetic linkage with the serA locus. We propose to name the K antigen-controlling gene kpsA. The genetic determinants of the two K antigens could also be transferred to enteropathogenic serotypes, even though such strains have never been found in nature with special acidic polysaccharide K antigens. A noncapsulated derivative, K(-), of the K10 strain can transfer the genetic determinant of the K antigen, demonstrating the probable existence of another chromosomal locus involved in the production of such acidic polysaccharide K antigens.
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Johnson EM, Snellings NJ, Life CA, Baron LS. Intraperitoneal mouse virulence of Salmonella typhimurium hybrids expressing somatic antigen 9. Infect Immun 1974; 10:669-71. [PMID: 4609907 PMCID: PMC423002 DOI: 10.1128/iai.10.3.669-671.1974] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023] Open
Abstract
Salmonella typhimurium hybrids expressing somatic antigen 9 after mating with either S. typhosa or S. enteritidis Hfr donors did not differ from their S. typhimurium parent with respect to the number of organisms required to produce death in mice inoculated intraperitoneally.
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Abstract
At least one factor that causes low fertility of Salmonella typhimurium LT2 strains in crosses with Escherichia coli K-12 Hfr's can be inhibited by growing the female strains in supplemented minimal salts medium rather than in nutrient broth and by incubating the female strains at 50 C immediately before mating with the Hfr. These pretreatments can enhance the recovery of prototrophic recombinants for markers injected early by the Hfr by a factor of as much as 10(4). The heat treatment is effective only on the female in intergeneric crosses and gradually loses (within 50 min) its effectiveness after return of heat-treated cells to 37 C. It is concluded that the restriction system of the female is heat-sensitive. Since markers injected late by the male enter females in which the heat-impaired restriction system has recovered, few recombinants for late markers are found. The presence of the leading end of an E. coli Hfr in an S. typhimurium-E. coli hybrid enhances by up to sevenfold the frequency of lac(+) recombinants in subsequent crosses with an E. coli Hfr if the E. coli segment is integrated into the chromosome of the hybrid; the effect is less marked if the E. coli segment is not integrated.
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Benzinger R, Kleber I. Transfection of Escherichia coli and Salmonella typhimurium spheroplasts: host-controlled restriction of infective bacteriophage P22 deoxyribonucleic acid. J Virol 1971; 8:197-202. [PMID: 5000542 PMCID: PMC356231 DOI: 10.1128/jvi.8.2.197-202.1971] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023] Open
Abstract
Under proper conditions, one infective center was obtained for 3 x 10(8) molecules of P22 phage deoxyribonucleic acid (DNA) when lysozyme-ethylenediaminetetraacetic acid spheroplasts of Escherichia coli were transfected in the presence of 25 mug of protamine sulfate per ml. A 3- to 50-fold B-specific and K-specific E. coli restriction of the incoming P22 DNA was observed. When P22 DNA-infected E. coli spheroplasts were plated with infertile r(LT) (+)m(LT) (+)Salmonella typhimurium indicator, an additional 70-fold restriction was observed. In the presence of protamine sulfate, penicillin spheroplasts of S. typhimurium SB1330 could be transfected b P22 DNA with efficiencies sometimes approaching those obtained with the E. coli spheroplasts; thus, facilitation of transfection by protamine sulfate is not limited to E. coli or to lysozyme-ethylenediaminetetraacetic acid spheroplasts. The application of these results to studies of transfection among other genuses and to studies of in vitro host-controlled restriction and modification for the two loci in S. typhimurium and the one locus in E. coli is discussed.
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Hedges RW. Transduction mechanisms of bacteriophage epsilon 15. I. General properties of the system. Genet Res (Camb) 1971; 18:9-19. [PMID: 5211366 DOI: 10.1017/s0016672300012362] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023] Open
Abstract
SUMMARYBacteriophageεγis capable of transduction both by replacement of a genetic segment of the recipient by the homologous genetic material from the donor strain and by the formation of defective transducing particles capable of lysogenizing the recipient strain ofS. anatum.The isolation of strains carrying such prophages, which have incorporated the lactose or arabinose operons, is reported. Lysogenic strains, carrying both normal and defective transducing prophage, form high-frequency transducing lysates. Other strains, carrying only defective prophage, show evidence that the association of prophage genes and transduced materials is stable since the loss of one frequently entails loss of the other.
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Johnson EM, Easterling SB, Baron LS. Inefficiency of genetic recombination in hybrids between Escherichia coli and Salmonella typhosa. J Bacteriol 1971; 106:243-9. [PMID: 4928011 PMCID: PMC248668 DOI: 10.1128/jb.106.1.243-249.1971] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023] Open
Abstract
An Escherichia coli Hfr strain in which three negative chromosomal alleles (leu(-), arg(-), and mtl(-)) were closely linked to three positive alleles (ara(+), rha(+), and xyl(+), respectively) was employed in matings with a Salmonella typhosa recipient. The detected expression of the negative E. coli alleles in S. typhosa hybrids selected for receipt of an associated positive E. coli marker was used to determine the occurrence of haploid S. typhosa recombinants, as distinguished from stable partial diploid hybrids. At the same time, the inheritance patterns and segregation behavior of the positive alleles provided indicators of the occurrence of partial diploid hybrids. Examination of both positive and negative markers inherited by ara(+), rha(+), and xyl(-) selected S. typhosa hybrid classes indicated that relatively short E. coli chromosomal segments (generally about 4 min or less in length) were involved in recombination (haploidy), whereas rather extensive E. coli genetic segments were conserved in the diploid state. S. typhosa hybrids selected for receipt of the ara(+) marker showed a 52% incidence of leu(-) haploidy, which is probably close to being an accurate measure of recombination at the site of the ara(+) allele. S. typhosa hybrids selected for receipt of the rha(+) or xyl(+) markers showed only a 20% incidence of arg(-) or mtl(-) haploidy, respectively, but both of these hybrid classes exhibited a higher incidence of conservation of extensive E. coli diploid segments than did the ara(+) selected class. Remating of haploid S. typhosa hybrids with recombinant xyl(+)mtl(-) or rha(+)arg(-) regions resulted in higher frequencies of hybrid recovery than were observed in the initial matings. However, there was a higher incidence of partial diploidy and a lower incidence of haploidy among the hybrids obtained from these rematings.
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Dekio S, Takata R, Osawa S. Geneti studies of the ribosomal proteins in Escherichi coli. VI. Determination of chromosomal loci for several ribosomal protein components using a hyrid strain between Escherchia coli and Salmonell typhimurium. MOLECULAR & GENERAL GENETICS : MGG 1970; 109:131-41. [PMID: 4923590 DOI: 10.1007/bf00269649] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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Stouthamer AH, Pietersma K. Deletion-mapping of resistance against chlorate in Klebsiella aerogenes. MOLECULAR & GENERAL GENETICS : MGG 1970; 106:174-9. [PMID: 5415254 DOI: 10.1007/bf00323836] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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Stouthamer AH. A genetical and biochemical study of chlorate-resistant mutants of Salmonella typhimurium. Antonie Van Leeuwenhoek 1969; 35:505-21. [PMID: 4318449 DOI: 10.1007/bf02219168] [Citation(s) in RCA: 47] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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Schlesinger MJ, Olsen R. Expression and localization of Escherichia coli alkaline phosphatase synthesized in Salmonella typhimurium cytoplasm. J Bacteriol 1968; 96:1601-5. [PMID: 4882017 PMCID: PMC315216 DOI: 10.1128/jb.96.5.1601-1605.1968] [Citation(s) in RCA: 36] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023] Open
Abstract
The Escherichia coli structural gene for alkaline phosphatase was inserted into Salmonella typhimurium by episomal transfer in order to determine whether this enzyme would continue to be localized to the periplasmic space of the bacterium even though it was formed in a cell that does not synthesize alkaline phosphatase. The S. typhimurium heterogenote synthesized alkaline phosphatase under conditions identical to that observed with E. coli. This enzyme appeared to be identical to that synthesized by E. coli, and was quantitatively released from the bacterial cell by spheroplast formation with lysozyme. These results showed that localization is not a property unique to the E. coli cell and suggested that, in E. coli, enzyme location is related to the structure of the protein. Formation of alkaline phosphatase in the S. typhimurium heterogenote was repressed in cells growing in a medium with excess inorganic phosphate, even though only one of the three regulatory genes for this enzyme is on the episome. Thus, S. typhimurium can supply the products of the other two regulatory genes essential for repression even though this bacterium seems to lack the structural gene for alkaline phosphatase.
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Okada M, Watanabe T. Isolation of Salmonella typhimurium mutants with increased recipient ability by the use of R factor. Nature 1968; 217:854-6. [PMID: 4867976 DOI: 10.1038/217854b0] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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Colson C, Colson AM. Host specificity and fertility in Salmonella typhimurium LT7. Biochem Biophys Res Commun 1967; 29:692-5. [PMID: 4865114 DOI: 10.1016/0006-291x(67)90272-0] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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Kondo E, Mitsuhashi S. Drug resistance of enteric bacteria. VI. Introduction of bacteriophage P1CM into Salmonella typhi and formation of PldCM and F-CM elements. J Bacteriol 1966; 91:1787-94. [PMID: 5327907 PMCID: PMC316124 DOI: 10.1128/jb.91.5.1787-1794.1966] [Citation(s) in RCA: 30] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023] Open
Abstract
Kondo, Eiko (Gunma University, Maebashi, Japan), and Susumu Mitsuhashi. Drug resistance of enteric bacteria. VI. Introduction of bacteriophage P1CM into Salmonella typhi and formation of P1dCM and F-CM elements. J. Bacteriol. 91:1787-1794. 1966.-Bacteriophage P1CM was introduced into Salmonella typhi by means of both phage infection and conjugation with Escherichia coli F(+) lysogenic for the phage. Upon incubation with a P1CM phage lysate, S. typhi and S. abony yield CM(r) cells which are lysogenic for P1CM, but S. typhimurium LT2 does not. The P1CM phage is adsorbed slightly to S. typhi, but no infectious centers are formed when the phage is plated on this strain. Tests on P1CM-adsorbing capacity of the S. typhi P1CM(+) strain and on plaque formation and transduction ability of the recovered phage from this strain indicated that the cell and the phage population did not have any special advantage over the original cell and phage population. Conjugation of S. typhi with E. coli F(+) carrying P1CM(+) gave three types of S. typhi CM(r) clones: those which carry the whole P1CM phage, those with the P1dCM element, and those with nontransferable CM(r). The second type has the F factor and is sensitive to f phages in spite of its typical behavior, serologically and biochemically, as S. typhi. It can donate the P1dCM and F(+) characters to E. coli F(-) or F(-)/P1 strains. As a consequence of conjugation with the E. coli F(+) strain, the CM(r) character of the third type of S. typhi, the nontransferable CM(r) element, acquired conjugational transferability, owing to the formation of the element, F-CM. This element can be transferred to an E. coli F(-) strain at a very high frequency (ca. 10(0)). Both the F and CM(r) determinants are jointly transduced with P1 phage and are jointly eliminated by acridine dye treatment.
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Eisenstark A. Mutagen-induced hybridization of Salmonella typhimurium LT2 X Escherichia coli K12 Hfr. Proc Natl Acad Sci U S A 1965; 54:117-20. [PMID: 5323014 PMCID: PMC285806 DOI: 10.1073/pnas.54.1.117] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023] Open
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Conjugation in Bacteria. Heredity (Edinb) 1964. [DOI: 10.1016/b978-0-12-395592-0.50010-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] Open
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