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Fair JM, Al-Hmoud N, Alrwashdeh M, Bartlow AW, Balkhamishvili S, Daraselia I, Elshoff A, Fakhouri L, Javakhishvili Z, Khoury F, Muzyka D, Ninua L, Tsao J, Urushadze L, Owen J. Transboundary determinants of avian zoonotic infectious diseases: challenges for strengthening research capacity and connecting surveillance networks. Front Microbiol 2024; 15:1341842. [PMID: 38435695 PMCID: PMC10907996 DOI: 10.3389/fmicb.2024.1341842] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2023] [Accepted: 01/19/2024] [Indexed: 03/05/2024] Open
Abstract
As the climate changes, global systems have become increasingly unstable and unpredictable. This is particularly true for many disease systems, including subtypes of highly pathogenic avian influenzas (HPAIs) that are circulating the world. Ecological patterns once thought stable are changing, bringing new populations and organisms into contact with one another. Wild birds continue to be hosts and reservoirs for numerous zoonotic pathogens, and strains of HPAI and other pathogens have been introduced into new regions via migrating birds and transboundary trade of wild birds. With these expanding environmental changes, it is even more crucial that regions or counties that previously did not have surveillance programs develop the appropriate skills to sample wild birds and add to the understanding of pathogens in migratory and breeding birds through research. For example, little is known about wild bird infectious diseases and migration along the Mediterranean and Black Sea Flyway (MBSF), which connects Europe, Asia, and Africa. Focusing on avian influenza and the microbiome in migratory wild birds along the MBSF, this project seeks to understand the determinants of transboundary disease propagation and coinfection in regions that are connected by this flyway. Through the creation of a threat reduction network for avian diseases (Avian Zoonotic Disease Network, AZDN) in three countries along the MBSF (Georgia, Ukraine, and Jordan), this project is strengthening capacities for disease diagnostics; microbiomes; ecoimmunology; field biosafety; proper wildlife capture and handling; experimental design; statistical analysis; and vector sampling and biology. Here, we cover what is required to build a wild bird infectious disease research and surveillance program, which includes learning skills in proper bird capture and handling; biosafety and biosecurity; permits; next generation sequencing; leading-edge bioinformatics and statistical analyses; and vector and environmental sampling. Creating connected networks for avian influenzas and other pathogen surveillance will increase coordination and strengthen biosurveillance globally in wild birds.
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Affiliation(s)
- Jeanne M. Fair
- Genomics and Bioanalytics, Los Alamos National Laboratory, Los Alamos, NM, United States
| | - Nisreen Al-Hmoud
- Bio-Safety and Bio-Security Center, Royal Scientific Society, Amman, Jordan
| | - Mu’men Alrwashdeh
- Bio-Safety and Bio-Security Center, Royal Scientific Society, Amman, Jordan
| | - Andrew W. Bartlow
- Genomics and Bioanalytics, Los Alamos National Laboratory, Los Alamos, NM, United States
| | | | - Ivane Daraselia
- Center of Wildlife Disease Ecology, Ilia State University, Tbilisi, Georgia
| | | | | | - Zura Javakhishvili
- Center of Wildlife Disease Ecology, Ilia State University, Tbilisi, Georgia
| | - Fares Khoury
- Department of Biology and Biotechnology, American University of Madaba, Madaba, Jordan
| | - Denys Muzyka
- National Scientific Center, Institute of Experimental and Clinical Veterinary Medicine, Kharkiv, Ukraine
| | | | - Jean Tsao
- Department of Fisheries and Wildlife, Michigan State University, East Lansing, MI, United States
| | - Lela Urushadze
- National Center for Disease Control and Public Health (NCDC) of Georgia, Tbilisi, Georgia
| | - Jennifer Owen
- Department of Fisheries and Wildlife, Michigan State University, East Lansing, MI, United States
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2
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Foss L, Feiszli T, Kramer VL, Reisen WK, Padgett K. Epidemic versus endemic West Nile virus dead bird surveillance in California: Changes in sensitivity and focus. PLoS One 2023; 18:e0284039. [PMID: 37023091 PMCID: PMC10079120 DOI: 10.1371/journal.pone.0284039] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2022] [Accepted: 03/21/2023] [Indexed: 04/07/2023] Open
Abstract
Since 2003, the California West Nile virus (WNV) dead bird surveillance program (DBSP) has monitored publicly reported dead birds for WNV surveillance and response. In the current paper, we compared DBSP data from early epidemic years (2004-2006) with recent endemic years (2018-2020), with a focus on specimen collection criteria, county report incidence, bird species selection, WNV prevalence in dead birds, and utility of the DBSP as an early environmental indicator of WNV. Although fewer agencies collected dead birds in recent years, most vector control agencies with consistent WNV activity continued to use dead birds as a surveillance tool, with streamlined operations enhancing efficiency. The number of dead bird reports was approximately ten times greater during 2004-2006 compared to 2018-2020, with reports from the Central Valley and portions of Southern California decreasing substantially in recent years; reports from the San Francisco Bay Area decreased less dramatically. Seven of ten counties with high numbers of dead bird reports were also high human WNV case burden areas. Dead corvid, sparrow, and quail reports decreased the most compared to other bird species reports. West Nile virus positive dead birds were the most frequent first indicators of WNV activity by county in 2004-2006, followed by positive mosquitoes; in contrast, during 2018-2020 mosquitoes were the most frequent first indicators followed by dead birds, and initial environmental WNV detections occurred later in the season during 2018-2020. Evidence for WNV impacts on avian populations and susceptibility are discussed. Although patterns of dead bird reports and WNV prevalence in tested dead birds have changed, dead birds have endured as a useful element within our multi-faceted WNV surveillance program.
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Affiliation(s)
- Leslie Foss
- Vector-Borne Disease Section, California Department of Public Health, Richmond, California, United States of America
| | - Tina Feiszli
- Vector-Borne Disease Section, California Department of Public Health, Richmond, California, United States of America
| | - Vicki L. Kramer
- Vector-Borne Disease Section, California Department of Public Health, Sacramento, California, United States of America
| | - William K. Reisen
- Department of Pathology, Microbiology and Immunology, School of Veterinary Medicine, University of California, Davis, CA, United States of America
| | - Kerry Padgett
- Vector-Borne Disease Section, California Department of Public Health, Richmond, California, United States of America
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3
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Tsoi MF, Fulton RM. West Nile Virus–Induced Drop in Egg Production in Commercial Pekin Duck Breeders. Avian Dis 2023; 67:114-118. [PMID: 37140120 DOI: 10.1637/aviandiseases-d-22-00044] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2022] [Accepted: 06/05/2022] [Indexed: 01/24/2023]
Abstract
A sudden drop in egg production in commercial poultry flocks can be economically devastating, and rapid identification of the cause often requires a combined effort between the producer, veterinarian, and pathologist. In September 2019, a 35-wk-old commercial Pekin breeder duck flock in Indiana suffered a drop in egg production from 1700 to 1000 eggs daily (41.2% drop). Again, in September 2021, three Pekin breeder duck flocks aged 32, 58, and 62 wk from the same company suffered a similar drop in egg production, with a mild increase in weekly mortality of 1.0% to 2.5%. In 2019 and in 2021, birds from affected flocks were submitted to the Veterinary Diagnostic Laboratory at Michigan State University for postmortem examination. Common gross examination findings included flaccid, shrunken, or atrophied ova (all hens), pododermatitis, airsacculitis, hepatomegaly, splenomegaly, ascites, and pallor of the left ventricle. Histopathologic examination of cerebrum, cerebellum, and brainstem revealed mild lymphocytic perivascular cuffing, vasculitis, and gliosis, suggesting viral encephalitis. In the heart, there was mild multifocal cardiomyocyte necrosis, mineralization, and infiltration by lymphocytes and macrophages. PCR for Newcastle disease virus, avian influenza virus, eastern equine encephalitis virus, and West Nile virus (WNV) was performed. Brain and heart samples were positive for WNV by PCR, and WNV antigen was detected in the cerebellum by immunohistochemistry. This is the first report to associate WNV infection with a drop in egg production in waterfowl, which are known to be important reservoir species for WNV and, as such, are generally asymptomatic.
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Affiliation(s)
- Mayra F. Tsoi
- Department of Pathobiology and Diagnostic Investigation, Michigan State University, Lansing, MI 48910
| | - Richard M. Fulton
- Department of Pathobiology and Diagnostic Investigation, Michigan State University, Lansing, MI 48910
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4
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Albrecht L, Kaufeld KA. Investigating the impact of environmental factors on West Nile virus human case prediction in Ontario, Canada. Front Public Health 2023; 11:1100543. [PMID: 36875397 PMCID: PMC9981635 DOI: 10.3389/fpubh.2023.1100543] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2022] [Accepted: 01/31/2023] [Indexed: 02/19/2023] Open
Abstract
West Nile virus is the most common mosquito borne disease in North America and the leading cause of viral encephalitis. West Nile virus is primarily transmitted between birds and mosquitoes while humans are incidental, dead-end hosts. Climate change may increase the risk of human infections as climatic variables have been shown to affect the mosquito life cycle, biting rate, incubation period of the disease in mosquitoes, and bird migration patterns. We develop a zero-inflated Poisson model to investigate how human West Nile virus case counts vary with respect to mosquito abundance and infection rates, bird abundance, and other environmental covariates. We use a Bayesian paradigm to fit our model to data from 2010-2019 in Ontario, Canada. Our results show mosquito infection rate, temperature, precipitation, and crow abundance are positively correlated with human cases while NDVI and robin abundance are negatively correlated with human cases. We find the inclusion of spatial random effects allows for more accurate predictions, particularly in years where cases are higher. Our model is able to accurately predict the magnitude and timing of yearly West Nile virus outbreaks and could be a valuable tool for public health officials to implement prevention strategies to mitigate these outbreaks.
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Affiliation(s)
- Laura Albrecht
- Statistical Sciences Group, Los Alamos National Laboratory, Los Alamos, NM, United States.,Department of Applied Mathematics and Statistics, Colorado School of Mines, Golden, CO, United States
| | - Kimberly A Kaufeld
- Statistical Sciences Group, Los Alamos National Laboratory, Los Alamos, NM, United States
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5
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Hays SC, Cheek RG, Mouton JC, Sillett TS, Ghalambor CK. Lack of avian predators is associated with behavioural plasticity in nest construction and height in an island songbird. Anim Behav 2022. [DOI: 10.1016/j.anbehav.2022.08.017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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6
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Beissinger SR, Peterson SM, Hall LA, Van Schmidt N, Tecklin J, Risk BB, Richmond OM, Kovach TJ, Kilpatrick AM. Stability of patch-turnover relationships under equilibrium and nonequilibrium metapopulation dynamics driven by biogeography. Ecol Lett 2022; 25:2372-2383. [PMID: 36209497 PMCID: PMC9828715 DOI: 10.1111/ele.14111] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2022] [Revised: 06/27/2022] [Accepted: 07/31/2022] [Indexed: 01/12/2023]
Abstract
Two controversial tenets of metapopulation biology are whether patch quality and the surrounding matrix are more important to turnover (colonisation and extinction) than biogeography (patch area and isolation) and whether factors governing turnover during equilibrium also dominate nonequilibrium dynamics. We tested both tenets using 18 years of surveys for two secretive wetland birds, black and Virginia rails, during (1) a period of equilibrium with stable occupancy and (2) after drought and arrival of West Nile Virus (WNV), which resulted in WNV infections in rails, increased extinction and decreased colonisation probabilities modified by WNV, nonequilibrium dynamics for both species and occupancy decline for black rails. Area (primarily) and isolation (secondarily) drove turnover during both stable and unstable metapopulation dynamics, greatly exceeding the effects of patch quality and matrix conditions. Moreover, slopes between turnover and patch characteristics changed little between equilibrium and nonequilibrium, confirming the overriding influences of biogeographic factors on turnover.
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Affiliation(s)
- Steven R. Beissinger
- Department of Environmental Science, Policy & ManagementUniversity of CaliforniaBerkeleyCaliforniaUSA,Museum of Vertebrate ZoologyUniversity of CaliforniaBerkeleyCaliforniaUSA
| | - Sean M. Peterson
- Department of Environmental Science, Policy & ManagementUniversity of CaliforniaBerkeleyCaliforniaUSA,Department of Environmental BiologyState University of New York College of Environmental Science and ForestryNew YorkUSA
| | - Laurie A. Hall
- Department of Environmental Science, Policy & ManagementUniversity of CaliforniaBerkeleyCaliforniaUSA,Museum of Vertebrate ZoologyUniversity of CaliforniaBerkeleyCaliforniaUSA,U.S. Geological Survey, Western Ecological Research Center, San Francisco Bay Estuary Field StationCaliforniaUSA
| | - Nathan Van Schmidt
- Department of Environmental Science, Policy & ManagementUniversity of CaliforniaBerkeleyCaliforniaUSA,US Geological Survey, Fort Collins Science CenterFort CollinsColoradoUSA
| | - Jerry Tecklin
- Sierra Foothills Research and Extension CenterBrowns ValleyCaliforniaUSA,21170 Shields Camp RoadNevada CityCaliforniaUSA
| | - Benjamin B. Risk
- Department of Environmental Science, Policy & ManagementUniversity of CaliforniaBerkeleyCaliforniaUSA,Department of Biostatistics and BioinformaticsEmory UniversityAtlantaGeorgiaUSA
| | - Orien M. Richmond
- Department of Environmental Science, Policy & ManagementUniversity of CaliforniaBerkeleyCaliforniaUSA,Rocky Mountain Arsenal National Wildlife RefugeCommerce CityColoradoUSA
| | - Tony J. Kovach
- Department of Ecology and Evolutionary BiologyUniversity of CaliforniaSanta CruzCaliforniaUSA,California Department of Public Health/Vector Borne Disease SectionCaliforniaUSA
| | - A. Marm Kilpatrick
- Department of Ecology and Evolutionary BiologyUniversity of CaliforniaSanta CruzCaliforniaUSA
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7
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West Nile Virus Infections in an Urban Colony of American White Ibises (Eudocimus albus) in South Florida, USA. J Wildl Dis 2021; 58:205-210. [PMID: 34797914 DOI: 10.7589/jwd-d-21-00030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2021] [Accepted: 07/12/2021] [Indexed: 11/20/2022]
Abstract
West Nile virus (WNV) is pathogenic in a wide range of avian hosts and is endemic in much of North America. This virus is responsible for population declines of some Passeriformes. We describe a WNV-associated mortality event in American White Ibis (Eudocimus albus) nestlings. This is a species, inherent to the Everglades ecosystem, which has recently begun nesting in urban areas. An urban colony in south Florida was monitored from March-July in 2020 as part of an ongoing study. Nestling carcasses were collected opportunistically and sent to the Southeastern Cooperative Wildlife Disease Study, University of Georgia within 24 h for diagnosis. Three ibis nestling deaths were confirmed to be caused by WNV infection based on histopathology, immunohistochemistry, and reverse transcription PCR. Serial plasma samples collected weekly from 36 healthy chicks of the same urban rookery were tested for WNV-neutralizing antibodies via plaque reduction neutralization test; four chicks were seropositive. Antibody titers in three seropositive chicks from which serial samples were collected waned over time, suggesting maternal antibody transfer. Ibis mortalities were consistent with a spike of WNV activity in this region of Florida. West Nile virus infection may be an important seasonal cause of mortality for wading bird nestlings.
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Blahove MR, Carter JR. Flavivirus Persistence in Wildlife Populations. Viruses 2021; 13:v13102099. [PMID: 34696529 PMCID: PMC8541186 DOI: 10.3390/v13102099] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2021] [Revised: 10/01/2021] [Accepted: 10/08/2021] [Indexed: 12/14/2022] Open
Abstract
A substantial number of humans are at risk for infection by vector-borne flaviviruses, resulting in considerable morbidity and mortality worldwide. These viruses also infect wildlife at a considerable rate, persistently cycling between ticks/mosquitoes and small mammals and reptiles and non-human primates and humans. Substantially increasing evidence of viral persistence in wildlife continues to be reported. In addition to in humans, viral persistence has been shown to establish in mammalian, reptile, arachnid, and mosquito systems, as well as insect cell lines. Although a considerable amount of research has centered on the potential roles of defective virus particles, autophagy and/or apoptosis-induced evasion of the immune response, and the precise mechanism of these features in flavivirus persistence have yet to be elucidated. In this review, we present findings that aid in understanding how vector-borne flavivirus persistence is established in wildlife. Research studies to be discussed include determining the critical roles universal flavivirus non-structural proteins played in flaviviral persistence, the advancement of animal models of viral persistence, and studying host factors that allow vector-borne flavivirus replication without destructive effects on infected cells. These findings underscore the viral–host relationships in wildlife animals and could be used to elucidate the underlying mechanisms responsible for the establishment of viral persistence in these animals.
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9
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Keyel AC, Gorris ME, Rochlin I, Uelmen JA, Chaves LF, Hamer GL, Moise IK, Shocket M, Kilpatrick AM, DeFelice NB, Davis JK, Little E, Irwin P, Tyre AJ, Helm Smith K, Fredregill CL, Elison Timm O, Holcomb KM, Wimberly MC, Ward MJ, Barker CM, Rhodes CG, Smith RL. A proposed framework for the development and qualitative evaluation of West Nile virus models and their application to local public health decision-making. PLoS Negl Trop Dis 2021; 15:e0009653. [PMID: 34499656 PMCID: PMC8428767 DOI: 10.1371/journal.pntd.0009653] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023] Open
Abstract
West Nile virus (WNV) is a globally distributed mosquito-borne virus of great public health concern. The number of WNV human cases and mosquito infection patterns vary in space and time. Many statistical models have been developed to understand and predict WNV geographic and temporal dynamics. However, these modeling efforts have been disjointed with little model comparison and inconsistent validation. In this paper, we describe a framework to unify and standardize WNV modeling efforts nationwide. WNV risk, detection, or warning models for this review were solicited from active research groups working in different regions of the United States. A total of 13 models were selected and described. The spatial and temporal scales of each model were compared to guide the timing and the locations for mosquito and virus surveillance, to support mosquito vector control decisions, and to assist in conducting public health outreach campaigns at multiple scales of decision-making. Our overarching goal is to bridge the existing gap between model development, which is usually conducted as an academic exercise, and practical model applications, which occur at state, tribal, local, or territorial public health and mosquito control agency levels. The proposed model assessment and comparison framework helps clarify the value of individual models for decision-making and identifies the appropriate temporal and spatial scope of each model. This qualitative evaluation clearly identifies gaps in linking models to applied decisions and sets the stage for a quantitative comparison of models. Specifically, whereas many coarse-grained models (county resolution or greater) have been developed, the greatest need is for fine-grained, short-term planning models (m-km, days-weeks) that remain scarce. We further recommend quantifying the value of information for each decision to identify decisions that would benefit most from model input.
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Affiliation(s)
- Alexander C. Keyel
- Division of Infectious Diseases, Wadsworth Center, New York State Department of Health, Albany, New York, United States of America
- Department of Atmospheric and Environmental Sciences, University at Albany, Albany, New York, United States of America
| | - Morgan E. Gorris
- Information Systems and Modeling & Center for Nonlinear Studies, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America
| | - Ilia Rochlin
- Center for Vector Biology, Rutgers University, New Brunswick, New Jersey, United States of America
| | - Johnny A. Uelmen
- Department of Pathobiology, College of Veterinary Medicine, University of Illinois at Urbana-Champaign, Urbana, Illinois, United States of America
| | - Luis F. Chaves
- Instituto Costarricense de Investigación y Enseñanza en Nutrición y Salud (INCIENSA), Tres Rios, Cartago, Costa Rica
| | - Gabriel L. Hamer
- Department of Entomology, Texas A&M University, College Station, Texas, United States of America
| | - Imelda K. Moise
- Department of Geography & Regional Studies, University of Miami, Coral Gables, Florida, United States of America
| | - Marta Shocket
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, California, United States of America
| | - A. Marm Kilpatrick
- Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, California, United States of America
| | - Nicholas B. DeFelice
- Department of Environmental Medicine and Public Health, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America
- Institute for Exposomic Research, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America
- Department of Environmental Health Sciences, Mailman School of Public Health, Columbia University, New York, New York, United States of America
| | - Justin K. Davis
- Department of Geography and Environmental Sustainability, University of Oklahoma, Norman, Oklahoma, United States of America
| | - Eliza Little
- Connecticut Agricultural Experimental Station, New Haven, Connecticut, United States of America
| | - Patrick Irwin
- Northwest Mosquito Abatement District, Wheeling, Illinois, United States of America
- Department of Entomology, University of Wisconsin-Madison, Madison, Wisconsin, United States of America
| | - Andrew J. Tyre
- School of Natural Resources, University of Nebraska-Lincoln, Lincoln, Nebraska, United States of America
| | - Kelly Helm Smith
- National Drought Mitigation Center, University of Nebraska-Lincoln, Lincoln, Nebraska, United States of America
| | - Chris L. Fredregill
- Mosquito and Vector Control Division, Harris County Public Health, Houston, Texas, United States of America
| | - Oliver Elison Timm
- Department of Atmospheric and Environmental Sciences, University at Albany, Albany, New York, United States of America
| | - Karen M. Holcomb
- Department of Pathology, Microbiology, and Immunology, University of California Davis, California, United States of America
| | - Michael C. Wimberly
- Department of Geography and Environmental Sustainability, University of Oklahoma, Norman, Oklahoma, United States of America
| | - Matthew J. Ward
- Environmental Analytics Group, Universities Space Research Association, NASA Ames Research Center, Moffett Field, California, United States of America
- Department of Tropical Medicine, Tulane University School of Public Health & Tropical Medicine, New Orleans, Louisiana, United States of America
| | - Christopher M. Barker
- Department of Pathology, Microbiology, and Immunology, University of California Davis, California, United States of America
| | - Charlotte G. Rhodes
- Department of Entomology, Texas A&M University, College Station, Texas, United States of America
| | - Rebecca L. Smith
- Department of Pathobiology, College of Veterinary Medicine, University of Illinois at Urbana-Champaign, Urbana, Illinois, United States of America
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ASSESSING THE HUMORAL RESPONSE TO AND SAFETY OF A COMMERCIALLY AVAILABLE EQUINE WEST NILE VIRUS VACCINE IN A ZOO-BASED CONSERVATION BREEDING POPULATION OF ENDANGERED GREATER SAGE-GROUSE ( CENTROCERCUS UROPHASIANUS). J Zoo Wildl Med 2021; 52:732-736. [PMID: 34130419 DOI: 10.1638/2020-0076] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 02/17/2021] [Indexed: 11/21/2022] Open
Abstract
Greater sage-grouse (Centrocercus urophasianus) are an endangered species in Canada and have been extirpated from five states in the United States. Infectious diseases can pose a challenge to conservation efforts, and the greater sage-grouse is susceptible to West Nile virus (WNV). This study measured the humoral response to a commercially available WNV vaccine in a zoo-based conservation breeding population of greater sage-grouse. Since the initiation of the conservation program in 2014, all sage-grouse at the Calgary Zoo's Wildlife Conservation Centre have been vaccinated against WNV. Juveniles received a series of three vaccines every 2-3 wk starting around 2 wk of age; adults had received the same vaccination series at hatch and had since been boostered annually. Antibody titers were measured on 60 serum samples from 36 juveniles and 18 adults collected in 2018 using either serum neutralization or plaque-reduction neutralization methods. No detectable antibody response was noted in juveniles after their second (n = 17) or third booster vaccinations (n = 23). Only 35% of 20 adult samples collected had positive titers even after multiple years of vaccination. Only two cases of adverse vaccine reaction have been noted in this species with over 800 doses being administered between 2014 and 2020. Despite a lack of antibody response in juveniles and most adults, there have been no WNV-associated deaths in this population even with confirmed cases of WNV in free-ranging greater sage-grouse and other species in the area during this time frame, suggesting that cell-mediated immunity may be of greater importance for protection against WNV infections in this species. The initial vaccination series was changed in 2019 to a series of only two doses of vaccine, and no clinical cases or mortality from WNV occurred in 2019 or 2020 with the new protocol.
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11
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Wheeler SS, Taff CC, Reisen WK, Townsend AK. Mosquito blood-feeding patterns and nesting behavior of American crows, an amplifying host of West Nile virus. Parasit Vectors 2021; 14:331. [PMID: 34158103 PMCID: PMC8220764 DOI: 10.1186/s13071-021-04827-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2021] [Accepted: 06/07/2021] [Indexed: 12/02/2022] Open
Abstract
Background Although American crows are a key indicator species for West Nile virus (WNV) and mount among the highest viremias reported for any host, the importance of crows in the WNV transmission cycle has been called into question because of their consistent underrepresentation in studies of Culex blood meal sources. Here, we test the hypothesis that this apparent underrepresentation could be due, in part, to underrepresentation of crow nesting habitat from mosquito sampling designs. Specifically, we examine how the likelihood of a crow blood meal changes with distance to and timing of active crow nests in a Davis, California, population. Methods Sixty artificial mosquito resting sites were deployed from May to September 2014 in varying proximity to known crow nesting sites, and Culex blood meal hosts were identified by DNA barcoding. Genotypes from crow blood meals and local crows (72 nestlings from 30 broods and 389 local breeders and helpers) were used to match mosquito blood meals to specific local crows. Results Among the 297 identified Culex blood meals, 20 (6.7%) were attributable to crows. The mean percentage of blood meals of crow origin was 19% in the nesting period (1 May–18 June 2014), but 0% in the weeks after fledging (19 June–1 September 2014), and the likelihood of a crow blood meal increased with proximity to an active nest: the odds that crows hosted a Culex blood meal were 38.07 times greater within 10 m of an active nest than > 10 m from an active nest. Nine of ten crow blood meals that could be matched to a genotype of a specific crow belonged to either nestlings in these nests or their mothers. Six of the seven genotypes that could not be attributed to sampled birds belonged to females, a sex bias likely due to mosquitoes targeting incubating or brooding females. Conclusion Data herein indicate that breeding crows serve as hosts for Culex in the initial stages of the WNV spring enzootic cycle. Given their high viremia, infected crows could thereby contribute to the re-initiation and early amplification of the virus, increasing its availability as mosquitoes shift to other moderately competent later-breeding avian hosts.![]() Supplementary Information The online version contains supplementary material available at 10.1186/s13071-021-04827-x.
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Affiliation(s)
- Sarah S Wheeler
- Sacramento-Yolo Mosquito and Vector Control District, 8631 Bond Road, Elk Grove, CA, 95624, USA.
| | - Conor C Taff
- Cornell Lab of Ornithology and Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY, 14850, USA
| | - William K Reisen
- Department of Pathology, Microbiology and Immunology, School of Veterinary Medicine, University of California, Davis, CA, 95616, USA
| | - Andrea K Townsend
- Department of Biology, Hamilton College, 198 College Hill Rd, Clinton, NY, 13323, USA
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12
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Kernbach ME, Martin LB, Unnasch TR, Hall RJ, Jiang RHY, Francis CD. Light pollution affects West Nile virus exposure risk across Florida. Proc Biol Sci 2021; 288:20210253. [PMID: 33757351 PMCID: PMC8059973 DOI: 10.1098/rspb.2021.0253] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2021] [Accepted: 03/02/2021] [Indexed: 12/19/2022] Open
Abstract
Emerging infectious diseases (EIDs) present global health threats, and their emergences are often linked to anthropogenic change. Artificial light at night (ALAN) is one form of anthropogenic change that spans beyond urban boundaries and may be relevant to EIDs through its influence on the behaviour and physiology of hosts and/or vectors. Although West Nile virus (WNV) emergence has been described as peri-urban, we hypothesized that exposure risk could also be influenced by ALAN in particular, which is testable by comparing the effects of ALAN on prevalence while controlling for other aspects of urbanization. By modelling WNV exposure among sentinel chickens in Florida, we found strong support for a nonlinear relationship between ALAN and WNV exposure risk in chickens with peak WNV risk occurring at low ALAN levels. Although our goal was not to discern how ALAN affected WNV relative to other factors, effects of ALAN on WNV exposure were stronger than other known drivers of risk (i.e. impervious surface, human population density). Ambient temperature in the month prior to sampling, but no other considered variables, strongly influenced WNV risk. These results indicate that ALAN may contribute to spatio-temporal changes in WNV risk, justifying future investigations of ALAN on other vector-borne parasites.
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Affiliation(s)
- Meredith E. Kernbach
- Center for Global Health and Infectious Disease Research, College of Public Health, University of South Florida, 3720 Spectrum Blvd., Tampa, FL 33612, USA
| | - Lynn B. Martin
- Center for Global Health and Infectious Disease Research, College of Public Health, University of South Florida, 3720 Spectrum Blvd., Tampa, FL 33612, USA
| | - Thomas R. Unnasch
- Center for Global Health and Infectious Disease Research, College of Public Health, University of South Florida, 3720 Spectrum Blvd., Tampa, FL 33612, USA
| | - Richard J. Hall
- Odum School of Ecology and Department of Infectious Diseases, College of Veterinary Medicine, University of Georgia, 501 D.W. Brooks Dr., Athens, GA 30602, USA
| | - Rays H. Y. Jiang
- Center for Global Health and Infectious Disease Research, College of Public Health, University of South Florida, 3720 Spectrum Blvd., Tampa, FL 33612, USA
| | - Clinton D. Francis
- Department of Biological Sciences, California Polytechnic State University, 1 Grand Ave., San Luis Obispo, CA 93407, USA
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13
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Dellicour S, Lequime S, Vrancken B, Gill MS, Bastide P, Gangavarapu K, Matteson NL, Tan Y, du Plessis L, Fisher AA, Nelson MI, Gilbert M, Suchard MA, Andersen KG, Grubaugh ND, Pybus OG, Lemey P. Epidemiological hypothesis testing using a phylogeographic and phylodynamic framework. Nat Commun 2020; 11:5620. [PMID: 33159066 PMCID: PMC7648063 DOI: 10.1038/s41467-020-19122-z] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2020] [Accepted: 09/30/2020] [Indexed: 01/05/2023] Open
Abstract
Computational analyses of pathogen genomes are increasingly used to unravel the dispersal history and transmission dynamics of epidemics. Here, we show how to go beyond historical reconstructions and use spatially-explicit phylogeographic and phylodynamic approaches to formally test epidemiological hypotheses. We illustrate our approach by focusing on the West Nile virus (WNV) spread in North America that has substantially impacted public, veterinary, and wildlife health. We apply an analytical workflow to a comprehensive WNV genome collection to test the impact of environmental factors on the dispersal of viral lineages and on viral population genetic diversity through time. We find that WNV lineages tend to disperse faster in areas with higher temperatures and we identify temporal variation in temperature as a main predictor of viral genetic diversity through time. By contrasting inference with simulation, we find no evidence for viral lineages to preferentially circulate within the same migratory bird flyway, suggesting a substantial role for non-migratory birds or mosquito dispersal along the longitudinal gradient.
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Affiliation(s)
- Simon Dellicour
- Spatial Epidemiology Lab (SpELL), Université Libre de Bruxelles, CP160/12, 50 Avenue FD Roosevelt, 1050, Bruxelles, Belgium.
- Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Herestraat 49, 3000, Leuven, Belgium.
| | - Sebastian Lequime
- Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Herestraat 49, 3000, Leuven, Belgium
| | - Bram Vrancken
- Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Herestraat 49, 3000, Leuven, Belgium
| | - Mandev S Gill
- Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Herestraat 49, 3000, Leuven, Belgium
| | - Paul Bastide
- Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Herestraat 49, 3000, Leuven, Belgium
| | - Karthik Gangavarapu
- Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA, 92037, USA
| | - Nathaniel L Matteson
- Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA, 92037, USA
| | - Yi Tan
- Department of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA
- Infectious Diseases Group, J. Craig Venter Institute, Rockville, MD, USA
| | | | - Alexander A Fisher
- Department of Biomathematics, David Geffen School of Medicine, University of California, Los Angeles, CA, USA
| | - Martha I Nelson
- Fogarty International Center, National Institutes of Health, Bethesda, MD, 20894, USA
| | - Marius Gilbert
- Spatial Epidemiology Lab (SpELL), Université Libre de Bruxelles, CP160/12, 50 Avenue FD Roosevelt, 1050, Bruxelles, Belgium
| | - Marc A Suchard
- Department of Biomathematics, David Geffen School of Medicine, University of California, Los Angeles, CA, USA
- Department of Biostatistics, Fielding School of Public Health, University of California, Los Angeles, CA, USA
- Department of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, CA, USA
| | - Kristian G Andersen
- Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA, 92037, USA
- Scripps Research Translational Institute, La Jolla, CA, 92037, USA
| | - Nathan D Grubaugh
- Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA
| | | | - Philippe Lemey
- Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Herestraat 49, 3000, Leuven, Belgium
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14
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Brannelly LA, McCallum HI, Grogan LF, Briggs CJ, Ribas MP, Hollanders M, Sasso T, Familiar López M, Newell DA, Kilpatrick AM. Mechanisms underlying host persistence following amphibian disease emergence determine appropriate management strategies. Ecol Lett 2020; 24:130-148. [PMID: 33067922 DOI: 10.1111/ele.13621] [Citation(s) in RCA: 31] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2020] [Revised: 06/18/2020] [Accepted: 09/08/2020] [Indexed: 12/19/2022]
Abstract
Emerging infectious diseases have caused many species declines, changes in communities and even extinctions. There are also many species that persist following devastating declines due to disease. The broad mechanisms that enable host persistence following declines include evolution of resistance or tolerance, changes in immunity and behaviour, compensatory recruitment, pathogen attenuation, environmental refugia, density-dependent transmission and changes in community composition. Here we examine the case of chytridiomycosis, the most important wildlife disease of the past century. We review the full breadth of mechanisms allowing host persistence, and synthesise research on host, pathogen, environmental and community factors driving persistence following chytridiomycosis-related declines and overview the current evidence and the information required to support each mechanism. We found that for most species the mechanisms facilitating persistence have not been identified. We illustrate how the mechanisms that drive long-term host population dynamics determine the most effective conservation management strategies. Therefore, understanding mechanisms of host persistence is important because many species continue to be threatened by disease, some of which will require intervention. The conceptual framework we describe is broadly applicable to other novel disease systems.
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Affiliation(s)
- Laura A Brannelly
- Veterinary BioSciences, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Werribee, Vic, 3030, Australia
| | - Hamish I McCallum
- Environmental Futures Research Institute and School of Environment and Science, Griffith University, Nathan, Qld., 4111, Australia
| | - Laura F Grogan
- Environmental Futures Research Institute and School of Environment and Science, Griffith University, Nathan, Qld., 4111, Australia.,Forest Research Centre, School of Environment, Science and Engineering, Southern Cross University, Lismore, NSW, 2480, Australia
| | - Cheryl J Briggs
- Ecology, Evolution and Marine Biology, University of California Santa Barbara, Santa Barbara, CA, 93106, USA
| | - Maria P Ribas
- Forest Research Centre, School of Environment, Science and Engineering, Southern Cross University, Lismore, NSW, 2480, Australia.,Wildlife Conservation Medicine Research Group, Departament de Medicina i Cirurgia Animals, Universitat Autònoma de Barcelona, Bellaterra, 08193, Spain
| | - Matthijs Hollanders
- Forest Research Centre, School of Environment, Science and Engineering, Southern Cross University, Lismore, NSW, 2480, Australia
| | - Thais Sasso
- Environmental Futures Research Institute and School of Environment and Science, Griffith University, Nathan, Qld., 4111, Australia
| | - Mariel Familiar López
- School of Environment and Sciences, Griffith University, Gold Coast, Qld., 4215, Australia
| | - David A Newell
- Forest Research Centre, School of Environment, Science and Engineering, Southern Cross University, Lismore, NSW, 2480, Australia
| | - Auston M Kilpatrick
- Department of Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA, 95064, USA
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15
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Bakker VJ, Sillett TS, Boyce WM, Doak DF, Vickers TW, Reisen WK, Cohen BS, Hallworth MT, Morrison SA. Translocation with targeted vaccination is the most effective strategy to protect an island endemic bird threatened by West Nile virus. DIVERS DISTRIB 2020. [DOI: 10.1111/ddi.13109] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023] Open
Affiliation(s)
| | - T. Scott Sillett
- Migratory Bird Center Smithsonian Conservation Biology InstituteNational Zoological Park Washington District of Columbia USA
| | | | - Daniel F. Doak
- Environmental Studies Program University of Colorado Boulder Colorado USA
| | | | | | | | - Michael T. Hallworth
- Migratory Bird Center Smithsonian Conservation Biology InstituteNational Zoological Park Washington District of Columbia USA
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16
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Flavivirus Envelope Protein Glycosylation: Impacts on Viral Infection and Pathogenesis. J Virol 2020; 94:JVI.00104-20. [PMID: 32161171 DOI: 10.1128/jvi.00104-20] [Citation(s) in RCA: 49] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2020] [Accepted: 03/10/2020] [Indexed: 02/06/2023] Open
Abstract
Flaviviruses encode one, two, or no N-linked glycosylation sites on their envelope proteins. Glycosylation can impact virus interactions with cell surface attachment factors and also may impact virion stability and virus replication. Envelope protein glycosylation has been identified as a virulence determinant for multiple flaviviruses, but the mechanisms by which glycosylation mediates pathogenesis remain unclear. In this Gem, we summarize current knowledge on flavivirus envelope protein glycosylation and its impact on viral infection and pathogenesis.
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17
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Comparative Pathology of West Nile Virus in Humans and Non-Human Animals. Pathogens 2020; 9:pathogens9010048. [PMID: 31935992 PMCID: PMC7168622 DOI: 10.3390/pathogens9010048] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2019] [Revised: 01/03/2020] [Accepted: 01/03/2020] [Indexed: 12/11/2022] Open
Abstract
West Nile virus (WNV) continues to be a major cause of human arboviral neuroinvasive disease. Susceptible non-human vertebrates are particularly diverse, ranging from commonly affected birds and horses to less commonly affected species such as alligators. This review summarizes the pathology caused by West Nile virus during natural infections of humans and non-human animals. While the most well-known findings in human infection involve the central nervous system, WNV can also cause significant lesions in the heart, kidneys and eyes. Time has also revealed chronic neurologic sequelae related to prior human WNV infection. Similarly, neurologic disease is a prominent manifestation of WNV infection in most non-human non-host animals. However, in some avian species, which serve as the vertebrate host for WNV maintenance in nature, severe systemic disease can occur, with neurologic, cardiac, intestinal and renal injury leading to death. The pathology seen in experimental animal models of West Nile virus infection and knowledge gains on viral pathogenesis derived from these animal models are also briefly discussed. A gap in the current literature exists regarding the relationship between the neurotropic nature of WNV in vertebrates, virus propagation and transmission in nature. This and other knowledge gaps, and future directions for research into WNV pathology, are addressed.
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