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For: Mizuuchi M, Weisberg RA, Mizuuchi K. DNA sequence of the control region of phage D108: the N-terminal amino acid sequences of repressor and transposase are similar both in phage D108 and in its relative, phage Mu. Nucleic Acids Res 1986;14:3813-25. [PMID: 3012481 PMCID: PMC339817 DOI: 10.1093/nar/14.9.3813] [Citation(s) in RCA: 29] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]  Open
Number Cited by Other Article(s)
1
Choi W, Saha RP, Jang S, Harshey RM. Controlling DNA degradation from a distance: a new role for the Mu transposition enhancer. Mol Microbiol 2014;94:595-608. [PMID: 25256747 DOI: 10.1111/mmi.12781] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/29/2014] [Indexed: 11/30/2022]
2
Saha RP, Lou Z, Meng L, Harshey RM. Transposable prophage Mu is organized as a stable chromosomal domain of E. coli. PLoS Genet 2013;9:e1003902. [PMID: 24244182 PMCID: PMC3820752 DOI: 10.1371/journal.pgen.1003902] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2013] [Accepted: 09/06/2013] [Indexed: 11/19/2022]  Open
3
McGillivary G, Tomaras AP, Rhodes ER, Actis LA. Cloning and sequencing of a genomic island found in the Brazilian purpuric fever clone of Haemophilus influenzae biogroup aegyptius. Infect Immun 2005;73:1927-38. [PMID: 15784532 PMCID: PMC1087403 DOI: 10.1128/iai.73.4.1927-1938.2005] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]  Open
4
Demongeot J, Thuderoz F, Baum TP, Berger F, Cohen O. Bio-array images processing and genetic networks modelling. C R Biol 2003;326:487-500. [PMID: 12886876 DOI: 10.1016/s1631-0691(03)00114-8] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
5
ffrench-Constant R, Waterfield N, Daborn P, Joyce S, Bennett H, Au C, Dowling A, Boundy S, Reynolds S, Clarke D. Photorhabdus: towards a functional genomic analysis of a symbiont and pathogen. FEMS Microbiol Rev 2003;26:433-56. [PMID: 12586390 DOI: 10.1111/j.1574-6976.2003.tb00625.x] [Citation(s) in RCA: 169] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]  Open
6
Mizuuchi M, Baker TA, Mizuuchi K. Assembly of phage Mu transpososomes: cooperative transitions assisted by protein and DNA scaffolds. Cell 1995;83:375-85. [PMID: 8521467 DOI: 10.1016/0092-8674(95)90115-9] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
7
Yang JY, Jayaram M, Harshey RM. Enhancer-independent variants of phage Mu transposase: enhancer-specific stimulation of catalytic activity by a partner transposase. Genes Dev 1995;9:2545-55. [PMID: 7590234 DOI: 10.1101/gad.9.20.2545] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
8
Clubb RT, Omichinski JG, Savilahti H, Mizuuchi K, Gronenborn AM, Clore GM. A novel class of winged helix-turn-helix protein: the DNA-binding domain of Mu transposase. Structure 1994;2:1041-8. [PMID: 7881904 DOI: 10.1016/s0969-2126(94)00107-3] [Citation(s) in RCA: 57] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
9
van Drunen CM, Mientjes E, van Zuylen O, van de Putte P, Goosen N. Transposase A binding sites in the attachment sites of bacteriophage Mu that are essential for the activity of the enhancer and A binding sites that promote transposition towards Fpro-lac. Nucleic Acids Res 1994;22:773-9. [PMID: 8139917 PMCID: PMC307881 DOI: 10.1093/nar/22.5.773] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]  Open
10
Kukolj G, DuBow M. Integration host factor activates the Ner-repressed early promoter of transposable Mu-like phage D108. J Biol Chem 1992. [DOI: 10.1016/s0021-9258(19)37118-2] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]  Open
11
Mizuuchi M, Baker TA, Mizuuchi K. Assembly of the active form of the transposase-Mu DNA complex: a critical control point in Mu transposition. Cell 1992;70:303-11. [PMID: 1322248 DOI: 10.1016/0092-8674(92)90104-k] [Citation(s) in RCA: 133] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
12
Kukolj G, DuBow MS. Characterization of the lysogenic repressor (c) from transposable Mu-like bacteriophage D108. Nucleic Acids Res 1991;19:5949-56. [PMID: 1658747 PMCID: PMC329052 DOI: 10.1093/nar/19.21.5949] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]  Open
13
Vogel JL, Li ZJ, Howe MM, Toussaint A, Higgins NP. Temperature-sensitive mutations in the bacteriophage Mu c repressor locate a 63-amino-acid DNA-binding domain. J Bacteriol 1991;173:6568-77. [PMID: 1833382 PMCID: PMC208994 DOI: 10.1128/jb.173.20.6568-6577.1991] [Citation(s) in RCA: 48] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]  Open
14
Pato ML, Banerjee M, Wagonner BT. Sequence of gene E15 of bacteriophage D108 and comparison with phage Mu. Nucleic Acids Res 1990;18:6458. [PMID: 2147059 PMCID: PMC332576 DOI: 10.1093/nar/18.21.6458] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]  Open
15
Burns CM, Chan HL, DuBow MS. In vitro maturation and encapsidation of the DNA of transposable Mu-like phage D108. Proc Natl Acad Sci U S A 1990;87:6092-6. [PMID: 2166943 PMCID: PMC54478 DOI: 10.1073/pnas.87.16.6092] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]  Open
16
Waggoner BT, Sultana K, Symonds N, Karlok MA, Pato ML. Identification of the bacteriophage Mu kil gene. Virology 1989;173:378-89. [PMID: 2531953 DOI: 10.1016/0042-6822(89)90550-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
17
Choi YL, Nishida T, Kawamukai M, Utsumi R, Sakai H, Komano T. Cloning and sequencing of an Escherichia coli gene, nlp, highly homologous to the ner genes of bacteriophages Mu and D108. J Bacteriol 1989;171:5222-5. [PMID: 2670911 PMCID: PMC210348 DOI: 10.1128/jb.171.9.5222-5225.1989] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]  Open
18
Desmet L, Faelen M, Gama MJ, Ferhat A, Toussaint A. Characterization of amber mutations in bacteriophage Mu transposase: a functional analysis of the protein. Mol Microbiol 1989;3:1145-58. [PMID: 2552260 DOI: 10.1111/j.1365-2958.1989.tb00265.x] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
19
Bétermier M, Alazard R, Lefrère V, Chandler M. Functional domains of bacteriophage Mu transposase: properties of C-terminal deletions. Mol Microbiol 1989;3:1159-71. [PMID: 2552261 DOI: 10.1111/j.1365-2958.1989.tb00266.x] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
20
Mizuuchi M, Mizuuchi K. Efficient Mu transposition requires interaction of transposase with a DNA sequence at the Mu operator: implications for regulation. Cell 1989;58:399-408. [PMID: 2546681 DOI: 10.1016/0092-8674(89)90854-4] [Citation(s) in RCA: 130] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
21
Levin DB, DuBow MS. Regulation of repressor and early gene expression in Mu-like transposable bacteriophage D108. MOLECULAR & GENERAL GENETICS : MGG 1989;217:392-400. [PMID: 2549379 DOI: 10.1007/bf02464909] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
22
Leung PC, Teplow DB, Harshey RM. Interaction of distinct domains in Mu transposase with Mu DNA ends and an internal transpositional enhancer. Nature 1989;338:656-8. [PMID: 2539564 DOI: 10.1038/338656a0] [Citation(s) in RCA: 113] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
23
Waggoner BT, Wade T, Pato ML. Identification of the bacteriophage D108 kil gene and of the second region of sequence nonhomology with bacteriophage Mu. Gene X 1988;62:111-9. [PMID: 2836266 DOI: 10.1016/0378-1119(88)90584-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]  Open
24
Levin DB, DuBow MS. Cloning and localization of the repressor gene (c) of the Mu-like transposable phage D108. FEBS Lett 1987;222:199-203. [PMID: 2820796 DOI: 10.1016/0014-5793(87)80219-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
25
Szatmari GB, Lapointe M, DuBow MS. The right end of transposable bacteriophage D108 contains a 520 base pair protein-encoding sequence not present in bacteriophage Mu. Nucleic Acids Res 1987;15:6691-704. [PMID: 2957646 PMCID: PMC306132 DOI: 10.1093/nar/15.16.6691] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]  Open
26
Tolias PP, Dubow MS. The amino terminus of the bacteriophage D108 transposase protein contains a two-component sequence-specific DNA-binding domain. Virology 1987;157:117-26. [PMID: 3029952 DOI: 10.1016/0042-6822(87)90320-5] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
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