Reduced Dosage of Methyl Bromide for Controlling Verticillium Wilt of Potato in Experimental and Commercial Plots

The possibility of using Serratia isolates for the production of biopreparations in the protection of plants against diseases and pests

The agriculture is extremely important for the life of human beings. Therefore, it is needed to control the enemies that destroy vast areas of crops causing great economic losses. Chemical pesticides were the option for many decades, but the damage that they cause to environment and human health led to the idea of changing the use of these for more sustainable options such as biopesticides as a biological control. Among microbial pesticides, Serratia species have been found as suitable options to apply against several pests or pathogens. Serratia species produce a wide range of secondary metabolites with several biological activities such as antifungal, antibacterial, and pesticides which can be used in sustainable agriculture. It has been reported that several Serratia species are able to suppress some crop diseases caused by Fusarium oxysporum, Rhizoctonia solani, Phytophthora parasitica, Sclerotinia sclerotiorum, Verticillium dahlia, and Phytophthora capsici among others. Therefore, they have been used as biocontrol agents in agriculture. In this review, we summarized the genus Serratia describing its history and development and the metabolites it secretes, which are responsible for their antibacterial and antifungal activity. We have analyzed the insecticide capacity of several Serratia species as well antifungal properties of Serratia species against most important crops' pathogens. In conclusion, the use of Serratia as a biological control agent against plant pathogens can be a good option for a sustainable agriculture. More work is needed to assess the safety of the isolated new strains and their effectiveness against pathogens in in vivo conditions.

A Microbiological Approach to Alleviate Soil Replant Syndrome in Peaches

Replant syndrome (RS) is a global problem characterized by reduced growth, production life, and yields of tree fruit/nut orchards. RS etiology is unclear, but repeated monoculture plantings are thought to develop a pathogenic soil microbiome. This study aimed to evaluate a biological approach that could reduce RS in peach (Prunus persica) orchards by developing a healthy soil bacteriome. Soil disinfection via autoclave followed by cover cropping and cover crop incorporation was found to distinctly alter the peach soil bacteriome but did not affect the RS etiology of RS-susceptible 'Lovell' peach seedlings. In contrast, non-autoclaved soil followed by cover cropping and incorporation altered the soil bacteriome to a lesser degree than autoclaving but induced significant peach growth. Non-autoclaved and autoclaved soil bacteriomes were compared to highlight bacterial taxa promoted by soil disinfection prior to growing peaches. Differential abundance shows a loss of potentially beneficial bacteria due to soil disinfection. The treatment with the highest peach biomass was non-autoclaved soil with a cover crop history of alfalfa, corn, and tomato. Beneficial bacterial species that were cultivated exclusively in the peach rhizosphere of non-autoclaved soils with a cover crop history were Paenibacillus castaneae and Bellilinea caldifistulae. In summary, the non-autoclaved soils show continuous enhancement of beneficial bacteria at each cropping phase, culminating in an enriched rhizosphere which may help alleviate RS in peaches.

Sclerospora graminicola Suppresses Plant Defense Responses by Disrupting Chlorophyll Biosynthesis and Photosynthesis in Foxtail Millet

Downy mildew of foxtail millet is an important oomycete disease caused by Sclerospora graminicola, affecting the yield and quality of the crop. Foxtail millet infected with S. graminicola exhibit symptoms of leaf yellowing and leaf cracking. To uncover the pathogenic mechanism of this disease, we explored the effects on chlorophyll synthesis and photosynthesis of foxtail millet leaves infected by S. graminicola. An elite foxtail millet variety, JG21, susceptible to S. graminicola, was used as for this study. S. graminicola inhibited chlorophyll synthesis and caused loose mesophyll cell arrangement. In addition, some cells were severely vacuolated in S. graminicola-infected foxtail millet leaves at the early stages of infection. S. graminicola could invade the mesophyll cells through haustoria which destroyed the chloroplast structure at the middle stages of infection causing significant accumulation of osmiophilic particles (OPs) and disintegrated chloroplast grana lamellae. Furthermore, foxtail millet leaves split longitudinally at the later stages of infection. Chlorophyll and carotenoid contents in infected leaves decreased significantly compared with those in the control. Net photosynthetic rate (Pn) of leaves and stomatal conductance showed a downward trend, and intercellular carbon dioxide concentrations increased significantly following the infection with S. graminicola. A total of 1,618 differentially expressed genes (DEGs) were detected between the control group and the treatment groups using RNA sequencing (RNA-Seq) among S1-S5 stages. DEGs associated with "photosynthesis" and "light reaction" were enriched. Gene expression patterns showed that 91.3% of 23 genes related to chlorophyll synthesis and photosynthesis, were significantly down-regulated than the control during S1-S5 stages. Based on the gene expression dataset, weighed gene co-expression network analysis (WGCNA) with 19 gene co-expression modules related to photosynthesis revealed six hub genes related to chlorophyll synthesis, which were suppressed during infection. The results suggest that infection of S. graminicola led to weak chlorophyll synthesis and rapid chloroplasts disappearance in foxtail millet. The defense responses and resistance of foxtail millet to S. graminicola were inhibited because chloroplast structure and function were destroyed in leaves, and the sexual reproduction in S. graminicola could be completed rapidly.

Cinnamic Acid Toxicity on the Structural Resistance and Photosynthetic Physiology of Faba Bean Promoted the Occurrence of Fusarium Wilt of Faba Bean, Which Was Alleviated Through Wheat and Faba Bean Intercropping

BACKGROUND

The pattern of intercropping wheat and faba bean is an effective means to alleviate continuous cropping obstacles.

AIM

To study the mechanism by which cinnamic acid promotes faba bean wilt and the mechanism by which intercropping alleviates this effect.

METHODS

Hydroponics was used to study the effects of inoculation with or without Fusarium oxysporum f. sp. fabae (FOF) and the effect of addition of different concentrations of cinnamic acid on seedling growth, Fusarium wilt, stem cell wall degrading enzyme activity, lignin content, tissue structure of the stem and leaf photosynthesis in monocropping and intercropping systems following the inoculation of faba bean with FOF.

RESULTS

Treatment with FOF significantly reduced the biomass and leaf photosynthesis of faba bean compared with the control. Microscopic observation showed that the xylem vessels of the stem were slightly thickened. Compared with FOF alone, the combination of FOF and cinnamic acid stress significantly increased the activity of cell wall degrading enzymes (CWDEs) produced by FOF in the stem and content of lignin in the stem. Microstructural observation showed that cell wall thickening of the xylem conduit, stratification, formation of a cavity and even caused the dispersion of tissue cell structure in the stem tissue of faba bean. Furthermore, the biomass and leaf photosynthesis of faba bean decreased significantly, and the occurrence of faba bean wilt increased. Compared with the faba bean monocropping treatment, the wheat and faba bean intercropping treatment significantly reduced the activity of CWDEs of FOF produced in faba bean stems and increased the lignin content. In addition, observation of the microstructure indicated that the tissue structural cell wall thickened after the stem had decreased, and the amount of colloidal substances and their containment decreased, causing a further decrease in tissue deformation, smaller intercellular spaces, less divided layer cell damage, an increase in the aboveground biomass and leaf photosynthesis of faba bean and a decrease in the occurrence of faba bean wilt.

CONCLUSION

Cinnamic acid decreased the resistance of tissue structure and promoted the occurrence of wilt. Wheat and faba bean intercropping improved the resistance of tissue structure, which reduced the occurrence of wilt.

Soil temperature determines the reaction of olive cultivars to Verticillium dahliae pathotypes

BACKGROUND

Development of Verticillium wilt in olive, caused by the soil-borne fungus Verticillium dahliae, can be influenced by biotic and environmental factors. In this study we modeled i) the combined effects of biotic factors (i.e., pathotype virulence and cultivar susceptibility) and abiotic factors (i.e., soil temperature) on disease development and ii) the relationship between disease severity and several remote sensing parameters and plant stress indicators.

METHODOLOGY

Plants of Arbequina and Picual olive cultivars inoculated with isolates of defoliating and non-defoliating V. dahliae pathotypes were grown in soil tanks with a range of soil temperatures from 16 to 32°C. Disease progression was correlated with plant stress parameters (i.e., leaf temperature, steady-state chlorophyll fluorescence, photochemical reflectance index, chlorophyll content, and ethylene production) and plant growth-related parameters (i.e., canopy length and dry weight).

FINDINGS

Disease development in plants infected with the defoliating pathotype was faster and more severe in Picual. Models estimated that infection with the defoliating pathotype was promoted by soil temperatures in a range of 16 to 24°C in cv. Picual and of 20 to 24°C in cv. Arbequina. In the non-defoliating pathotype, soil temperatures ranging from 16 to 20°C were estimated to be most favorable for infection. The relationship between stress-related parameters and disease severity determined by multinomial logistic regression and classification trees was able to detect the effects of V. dahliae infection and colonization on water flow that eventually cause water stress.

CONCLUSIONS

Chlorophyll content, steady-state chlorophyll fluorescence, and leaf temperature were the best indicators for Verticillium wilt detection at early stages of disease development, while ethylene production and photochemical reflectance index were indicators for disease detection at advanced stages. These results provide a better understanding of the differential geographic distribution of V. dahliae pathotypes and to assess the potential effect of climate change on Verticillium wilt development.

Defining the core Arabidopsis thaliana root microbiome

Land plants associate with a root microbiota distinct from the complex microbial community present in surrounding soil. The microbiota colonizing the rhizosphere (immediately surrounding the root) and the endophytic compartment (within the root) contribute to plant growth, productivity, carbon sequestration and phytoremediation. Colonization of the root occurs despite a sophisticated plant immune system, suggesting finely tuned discrimination of mutualists and commensals from pathogens. Genetic principles governing the derivation of host-specific endophyte communities from soil communities are poorly understood. Here we report the pyrosequencing of the bacterial 16S ribosomal RNA gene of more than 600 Arabidopsis thaliana plants to test the hypotheses that the root rhizosphere and endophytic compartment microbiota of plants grown under controlled conditions in natural soils are sufficiently dependent on the host to remain consistent across different soil types and developmental stages, and sufficiently dependent on host genotype to vary between inbred Arabidopsis accessions. We describe different bacterial communities in two geochemically distinct bulk soils and in rhizosphere and endophytic compartments prepared from roots grown in these soils. The communities in each compartment are strongly influenced by soil type. Endophytic compartments from both soils feature overlapping, low-complexity communities that are markedly enriched in Actinobacteria and specific families from other phyla, notably Proteobacteria. Some bacteria vary quantitatively between plants of different developmental stage and genotype. Our rigorous definition of an endophytic compartment microbiome should facilitate controlled dissection of plant-microbe interactions derived from complex soil communities.

Roles of Infected Seed Tubers and Soilborne Inoculum on Verticillium Wilt of 'Russet Burbank' Potato

Verticillium dahliae, causal agent of Verticillium wilt of potato, persists in soil as microsclerotia and can be found in infected tubers used for seed. The effects of naturally infected tubers and soilborne inoculum on Verticillium wilt symptoms were compared in the greenhouse. Infected and noninfected tubers were grown in infested and noninfested potting soil. Chlorosis and necrosis were measured and converted to area under senescence progress curves (AUSPC). Aboveground stems and progeny tubers were assayed for V. dahliae. Plants from infested soils exhibited significantly greater AUSPC than plants from noninfested soil. Plants grown from infected and noninfected tubers had similar AUSPC and interactions between infected tubers and infested soil were not observed. The pathogen was isolated from the vascular system of 94% of plants grown in infested soils and 8% of plants grown from infected tubers in noninfested soil. Plants grown in infested soil contained microsclerotia on 46% of stems while plants grown from infected tubers in noninfested soils exhibited microsclerotia on <1% of stems. Infected progeny tubers were only recovered from plants grown in infested soil. Seed tuber infection did not contribute to premature senescence or potential inoculum production, indicating that management efforts should focus on reducing soilborne inoculum.

Accelerated degradation of metam-sodium in soil and consequences for root-disease management

We studied the development of accelerated degradation (AD) of methyl isothiocyanate (MITC) following repeated applications of its parent compound, metam-sodium (MS). Laboratory studies and four sets of field experiments were conducted during 2002-04 in three commercial fields in Israel. Repeated applications of MS to the three soils in the laboratory under controlled conditions demonstrated AD of MITC in some soils. In a peanut field, MS significantly reduced the incidence of Pythium pod rot and improved pod quality after a single application but its effectiveness was greatly reduced after two applications. In a second experiment, MS was significantly effective after a single application in controlling Verticillium wilt in potato but its efficacy diminished after three consecutive applications. In an additional experiment, fumigation with MS following single or double applications was more effective in reducing Verticillium wilt severity of potato compared with triple applications. Soils which did not develop AD of MITC were also recorded. Preplant MS fumigation of melon fields was effective at reducing sudden wilt following a single and two consecutive applications. Our study shows that development of AD of MITC might occur following repeated applications of MS in commercial fields. The data on MITC dissipation in soil following repeated MS applications under controlled conditions indicate the chemical's potential loss of activity under regular agricultural practices and the need for a management strategy to prevent such a development.

Dose Response of Weed Seeds, Plant-Parasitic Nematodes, and Pathogens to Twelve Rates of Metam Sodium in a California Soil

Metam sodium (sodium N-methyl dithiocarbamate, metam-Na) is widely used in agricultural and floricultural production for controlling soilborne plant pathogens, parasitic nematodes, and weeds. It undergoes rapid decomposition to the biocide methyl isothiocyanate (MITC) in moist soils. In this study, the efficacy of 12 concentrations of metam-Na (10 to 2,650 μmol kg^-1 soil) to control seeds or tubers of five major weed species, three soilborne pathogens, and one parasitic nematode was evaluated in a sandy loam soil under controlled conditions. Soils were exposed to the fumigant in microcosms for 24 h at 10 and 20°C. Generation and dissipation curves of MITC in soil under controlled conditions showed that MITC concentrations in soils were highest 2 h after metam-Na application and decreased steadily over the 24-h incubation period. After 24 h, remaining MITC concentrations in soil microcosms at 10 and 20°C were 53 and 38% of the original amount applied, respectively, indicating a 20% reduction in MITC dissipation at the lower soil temperature. Logistic dose-response models were used to estimate the effective concentration necessary to reduce soil pest viability by 50 (LC₅₀) or 90 (LC₉₀) percent under both temperatures. Seed of Portulaca oleracea, with LC₉₀ values of ≤1,242 μmol kg^-1 soil, was the most sensitive to soil fumigation with metam-Na, followed by Polygonum arenastrum with LC₉₀ values of ≤1,922 μmol kg^-1 soil. At 10°C fumigation temperature, metam-Na at the highest dose tested in this study, 2,650 μmol kg^-1 soil, was not sufficient to achieve adequate control of Stellaria media and Malva parviflora seed and Cyperus esculentus tubers. Weed control efficacy (average reduction in LC₉₀ values) of metam-Na was between 25 and 60% higher if soils were fumigated at 20°C compared with 10°C, with the exception of M. parviflora. Phytophthora cactorum and Pythium ultimum were more sensitive to soil fumigation with metam-Na (LC₉₀ ≤ 165 μmol kg^-1 soil) than Verticillium dahliae (LC₉₀ ≤ 737 μmol kg^-1 soil). The nematode Tylenchulus semipenetrans was highly sensitive to soil fumigation with metam-Na (LC₉₀ ≤ 98 μmol kg^-1 soil), and the efficacy of control increased by 30% if soil was fumigated at 20°C compared with 10°C. In this sandy loam soil, metam-Na at a concentration of 850 μmol kg^-1 reduced the viability of Portulaca oleracea and Polygonum arenastrum seeds, C. esculentus tubers, and all soilborne pathogens and parasitic nematodes tested by 90% at 20°C after 24 h exposure. These results indicate that metam-Na can provide effective pest and disease control at maximum label rate for the commercial formulation, but there was a reduction in efficacy at low temperature.

Improving potato storage and processing characteristics through all-native DNA transformation

The dominant potato (Solanum tuberosum) variety for French fry production in the United States is the 131-year-old Russet Burbank. Market penetration of the higher yielding and more uniform Ranger Russet variety is limited to about one-fifth of that of the Russet Burbank because of two storage deficits: black spot bruise sensitivity and high levels of cold-induced sweetening. Here, these trait weaknesses are turned into strengths by simultaneously lowering the expression of Ranger Russet's tuber-expressed polyphenol oxidase (Ppo), starch-associated R1, and phosphorylase-L (PhL) genes. This genetic modification was accomplished without inserting any foreign DNA into the plant genome. French fries from the intragenic potatoes also contained reduced amounts of the antinutritional compound acrylamide while, unexpectedly, displaying enhanced sensory characteristics.

Optimizing Soil Disinfestation Procedures for Fresh Market Tomato and Pepper Production

Combinations of soil fumigation with a mixture of 1,3-dichloropropene (1,3-D) plus chloropicrin (Pic) and soil solarization for 7 days were evaluated under different plastic films and sequences of application for their effects on soilborne pests and marketable yield of fresh market tomato (Lycopersicon esculentum) and pepper (Capsicum annuum). Shank injection of fumigants under a virtually impermeable film (VIF) using a novel application apparatus dramatically improved their retention in the soil. Survival of Fusarium oxysporum f. sp. lycopersici in soil declined significantly when fumigation or solarization was combined with VIF compared with either soil disinfestation treatment applied under low-density polyethylene. When compared with an untreated control, significant reductions in yellow nutsedge (Cyperus esculentus), purple nutsedge (C. rotundus), and root-knot nematodes (Meloidogyne spp.) were achieved with a reduced dosage of fumigant when applications were made 7 days after planting beds were covered with VIF. A 7-day delay in fumigant application in beds covered by low-density polyethylene significantly increased marketable yield of pepper when compared with an untreated control. The results demonstrate that chemical and nonchemical soil disinfestation methods can be combined with novel application technology and procedures to improve their spectrum of pest control and reduce fumigant application rates.

Study of the voltammetric behaviour of metam and its application to an amperometric flow system

The electrochemical behaviour of the pesticide metam (MT) at a glassy carbon working electrode (GCE) and at a hanging mercury drop electrode (HMDE) was investigated. Different voltammetric techniques, including cyclic voltammetry (CV) and square wave voltammetry (SWV), were used. An anodic peak (independent of pH) at +1.46 V vs AgCl/Ag was observed in MT aqueous solution using the GCE. SWV calibration curves were plotted under optimized conditions (pH 2.5 and frequency 50 Hz), which showed a linear response for 17-29 mg L(-1). Electrochemical reduction was also explored, using the HMDE. A well defined cathodic peak was recorded at -0.72 V vs AgCl/Ag, dependent on pH. After optimizing the operating conditions (pH 10.1, frequency 150 Hz, potential deposition -0.20 V for 10 s), calibration curves was measured in the concentration range 2.5 x 10(-1) to 1.0 mg L(-1) using SWV. The electrochemical behaviour of this compound facilitated the development of a flow injection analysis (FIA) system with amperometric detection for the quantification of MT in commercial formulations and spiked water samples. An assessment of the optimal FIA conditions indicated that the best analytical results were obtained at a potential of +1.30 V, an injection volume of 207 muL and an overall flow rate of 2.4 ml min(-1). Real samples were analysed via calibration curves over the concentration range 1.3 x 10(-2) to 1.3 mg L(-1). Recoveries from the real samples (spiked waters and commercial formulations) were between 97.4 and 105.5%. The precision of the proposed method was evaluated by assessing the relative standard deviation (RSD %) of ten consecutive determinations of one sample (1.0 mg L(-1)), and the value obtained was 1.5%.

Relationships Between Verticillium dahliae Inoculum Density and Wilt Incidence, Severity, and Growth of Cauliflower

ABSTRACT Microplot and field experiments were conducted to evaluate the effects of inoculum density on Verticillium wilt and cauliflower growth. Soil containing Verticillium dahliae microsclerotia was mixed with various proportions of fumigated soil to establish different inoculum densities (fumigated soil was used as the noninfested control). Seven inoculum density treatments replicated four times were established, and the treatments were arranged in a randomized complete block design. Soil was collected from each microplot immediately after soil infestation for V. dahliae assay by plating onto sodium polypectate agar (NP-10) selective medium using the Anderson sampler technique. Five-week-old cauliflower was transplanted into two beds within each 1.2- by 1.2-m microplot. At the same time, several extra plants were also transplanted at the edge of each bed for destructive sampling to examine the disease onset (vascular discoloration) after planting. Cauliflower plants were monitored for Verticillium wilt development. Stomatal resistance in two visually healthy upper and two lower, diseased leaves in each microplot was measured three times at weekly intervals after initial wilt symptoms occurred. At maturity, all plants were uprooted, washed free of soil, and wilt incidence and severity, plant height, number of leaves, and dry weights of leaves and roots were determined. The higher the inoculum density, the earlier was disease onset. A density of 4 microsclerotia per g of dry soil caused 16% wilt incidence, but about 10 microsclerotia per g of soil caused 50% wilt incidence. Both wilt incidence and severity increased with increasing inoculum density up to about 20 microsclerotia per g of soil, and additional inoculum did not result in significantly higher disease incidence and severity. A negative exponential model described the disease relationships to inoculum levels under both microplot and field conditions. Stomatal resistance of diseased leaves was significantly higher at higher inoculum densities; in healthy leaves, however, no treatment differences occurred. The height, number of leaves, and dry weights of leaves and roots of plants in the fumigated control were significantly higher than in infested treatments, but the effects of inoculum density treatments were variable between years. Timing of cauliflower infection, crop physiological processes related to hydraulic conductance, and wilt intensity (incidence and severity) were thus affected by the inoculum density. Verticillium wilt management methods used in cauliflower should reduce inoculum density to less than four micro-sclerotia per g of soil to produce crops with the fewest number of infected plants.