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Moraes WB, Madden LV, Paul PA. Characterizing Heterogeneity and Determining Sample Sizes for Accurately Estimating Wheat Fusarium Head Blight Index in Research Plots. PHYTOPATHOLOGY 2022; 112:315-334. [PMID: 34058859 DOI: 10.1094/phyto-04-21-0157-r] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Because Fusarium head blight (FHB) intensity is usually highly variable within a plot, the number of spikes rated for FHB index (IND) quantification must be considered when designing experiments. In addition, quantification of sources of IND heterogeneity is crucial for defining sampling protocols. Field experiments were conducted to quantify the variability of IND ("field severity") at different spatial scales and to investigate the effects of sample size on estimated plot-level mean IND and its accuracy. A total of 216 7-row × 6-m-long plots of a moderately resistant and a susceptible cultivar were spray-inoculated with different Fusarium graminearum spore concentrations at anthesis to generate a range of IND levels. A one-stage cluster sampling approach was used to estimate IND, with an average of 32 spikes rated at each of 10 equally spaced points per plot. Plot-level mean IND ranged from 0.9 to 37.9%. Heterogeneity of IND, quantified by fitting unconditional hierarchical linear models, was higher among spikes within clusters than among clusters within plots or among plots. The projected relative error of mean IND increased as mean IND decreased, and as sample size decreased to <100 spikes per plot. Simple random samples were drawn with replacement 50,000 times from the original dataset for each plot and used to estimate the effects of sample sizes on mean IND. Samples of 100 or more spikes resulted in more precise estimates of mean IND than smaller samples. Poor sampling may result in inaccurate estimates of IND and poor interpretation of results.
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Affiliation(s)
- Wanderson Bucker Moraes
- Department of Plant Pathology, The Ohio State University, Ohio Agricultural Research and Development Center, Wooster, OH 44691
| | - Laurence V Madden
- Department of Plant Pathology, The Ohio State University, Ohio Agricultural Research and Development Center, Wooster, OH 44691
| | - Pierce A Paul
- Department of Plant Pathology, The Ohio State University, Ohio Agricultural Research and Development Center, Wooster, OH 44691
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Hjelkrem AGR, Aamot HU, Lillemo M, Sørensen ES, Brodal G, Russenes AL, Edwards SG, Hofgaard IS. Weather Patterns Associated with DON Levels in Norwegian Spring Oat Grain: A Functional Data Approach. PLANTS (BASEL, SWITZERLAND) 2021; 11:73. [PMID: 35009077 PMCID: PMC8747184 DOI: 10.3390/plants11010073] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/18/2021] [Revised: 12/22/2021] [Accepted: 12/22/2021] [Indexed: 06/14/2023]
Abstract
Fusarium graminearum is regarded as the main deoxynivalenol (DON) producer in Norwegian oats, and high levels of DON are occasionally recorded in oat grains. Weather conditions in the period around flowering are reported to have a high impact on the development of Fusarium head blight (FHB) and DON in cereal grains. Thus, it would be advantageous if the risk of DON contamination of oat grains could be predicted based on weather data. We conducted a functional data analysis of weather-based time series data linked to DON content in order to identify weather patterns associated with increased DON levels. Since flowering date was not recorded in our dataset, a mathematical model was developed to predict phenological growth stages in Norwegian spring oats. Through functional data analysis, weather patterns associated with DON content in the harvested grain were revealed mainly from about three weeks pre-flowering onwards. Oat fields with elevated DON levels generally had warmer weather around sowing, and lower temperatures and higher relative humidity or rain prior to flowering onwards, compared to fields with low DON levels. Our results are in line with results from similar studies presented for FHB epidemics in wheat. Functional data analysis was found to be a useful tool to reveal weather patterns of importance for DON development in oats.
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Affiliation(s)
- Anne-Grete Roer Hjelkrem
- Division of Food Production and Society, Norwegian Institute of Bioeconomy Research (NIBIO), 1431 Ås, Norway;
| | - Heidi Udnes Aamot
- Division of Biotechnology and Plant Health, Norwegian Institute of Bioeconomy Research (NIBIO), 1431 Ås, Norway; (H.U.A.); (G.B.); (I.S.H.)
| | - Morten Lillemo
- Department of Plant Sciences, Norwegian University of Life Sciences (NMBU), 1432 Ås, Norway;
| | | | - Guro Brodal
- Division of Biotechnology and Plant Health, Norwegian Institute of Bioeconomy Research (NIBIO), 1431 Ås, Norway; (H.U.A.); (G.B.); (I.S.H.)
| | - Aina Lundon Russenes
- Division of Food Production and Society, Norwegian Institute of Bioeconomy Research (NIBIO), 1431 Ås, Norway;
| | - Simon G. Edwards
- Centre for Integrated Pest Management, Harper Adams University, Newport TF 10 8NB, UK;
| | - Ingerd Skow Hofgaard
- Division of Biotechnology and Plant Health, Norwegian Institute of Bioeconomy Research (NIBIO), 1431 Ås, Norway; (H.U.A.); (G.B.); (I.S.H.)
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Dalla Lana F, Madden LV, Paul PA. Natural Occurrence of Maize Gibberella Ear Rot and Contamination of Grain with Mycotoxins in Association with Weather Variables. PLANT DISEASE 2021; 105:114-126. [PMID: 33197383 DOI: 10.1094/pdis-05-20-0952-re] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Gibberella ear rot (GER) severity (percent area of the ear diseased) and associated grain contamination with mycotoxins were quantified in plots of 15 to 16 maize hybrids planted at 10 Ohio locations from 2015 to 2018. Deoxynivalenol (DON) was quantified in grain samples in all 4 years, whereas nivalenol, 3-acetyldeoxynivalenol, and 15-acetyldeoxynivalenol (15ADON) were quantified only in the last 2 years. Only DON and 15ADON were detected. The highest levels of GER and DON contamination were observed for 2018, followed by 2016 and 2017. No GER symptoms or DON were detected in 2015. Approximately 41% of the samples from asymptomatic ears had detectable levels of DON, and 7% of these samples from 2016 had DON > 5 ppm. Associations between DON contamination and 43 variables representing summaries of temperature (T), relative humidity (RH), rainfall (R), surface wetness, and T-RH combinations for different window lengths and positions relative to R1 growth stage were quantified with Spearman correlation coefficients (r). Fifteen-day window lengths tended to show the highest correlations. Most of the variables based on T, R, RH, and T-RH were significantly correlated with DON for the 15-day window, as well as other windows. For moisture-related variables, there generally was a negative correlation before R1, changing to a positive correlation after R1. Results showed that GER and DON can be frequently found in Ohio maize fields, with the risk of DON being associated with multiple weather variables, particularly those representing combinations of T between 15 and 30°C and RH > 80 summarized during the 3 weeks after R1.
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Affiliation(s)
- F Dalla Lana
- Department of Plant Pathology, The Ohio State University, Ohio Agricultural Research and Development Center, Wooster, OH 44691
| | - L V Madden
- Department of Plant Pathology, The Ohio State University, Ohio Agricultural Research and Development Center, Wooster, OH 44691
| | - P A Paul
- Department of Plant Pathology, The Ohio State University, Ohio Agricultural Research and Development Center, Wooster, OH 44691
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Fulcher MR, Winans JB, Quan M, Bergstrom GC. The Incidence of Fusarium graminearum in Wild Grasses is Associated With Rainfall and Cumulative Host Density in New York. PLANT DISEASE 2020; 104:2681-2687. [PMID: 32749945 DOI: 10.1094/pdis-02-20-0286-re] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
The movement of plant pathogens between cultivated and natural host communities can result in lost agricultural production and altered microbial or plant biodiversity. Fusarium graminearum incidence was studied in wild grass hosts for 3 years to better understand the ecology of this plant pathogen at the interface of crop fields and nonagricultural environments. Research sites (n = 23) were spread between regions of high and low agricultural production and included both agricultural and nonagricultural fields. Pathogen incidence in living grass spikes and senesced, overwintered stems varied between regions of New York and was lowest in a region with sparser agricultural production (P = 0.001). However, pathogen incidence within regions was similar at both agricultural and nonagricultural sites. The groundcover of crop and wild hosts within 1 km of sample sites were equally effective predictors of pathogen incidence, indicating either host group may drive pathogen spread. Rainfall in the 8 weeks preceding sample collection was strongly correlated with F. graminearum incidence in grasses, as well as an increased prevalence of F. graminearum in Fusarium spp. communities (P = 0.001). Grass species diversity was not associated with a reduction in pathogen incidence, and F. graminearum incidence did not vary among the most well-sampled grasses. These results indicate the pathogen colonizes and spreads in noncultivated grasses in a manner consistent with existing concepts of pathogen epidemiology in cereal crops. Increasing host acreage, whether cultivated or not, could drive the colonization of grasses in remote or protected environments, potentially altering their microbial communities.
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Affiliation(s)
- Michael R Fulcher
- School of Integrative Plant Science, Plant Pathology and Plant-Microbe Biology Section, Cornell University, Ithaca, NY 14853-5904
| | - James B Winans
- School of Integrative Plant Science, Plant Pathology and Plant-Microbe Biology Section, Cornell University, Ithaca, NY 14853-5904
| | - Menchus Quan
- School of Integrative Plant Science, Plant Pathology and Plant-Microbe Biology Section, Cornell University, Ithaca, NY 14853-5904
| | - Gary C Bergstrom
- School of Integrative Plant Science, Plant Pathology and Plant-Microbe Biology Section, Cornell University, Ithaca, NY 14853-5904
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Drakopoulos D, Luz C, Torrijos R, Meca G, Weber P, Bänziger I, Voegele RT, Six J, Vogelgsang S. Use of Botanicals to Suppress Different Stages of the Life Cycle of Fusarium graminearum. PHYTOPATHOLOGY 2019; 109:2116-2123. [PMID: 31600112 DOI: 10.1094/phyto-06-19-0205-r] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Fusarium head blight (FHB) is one of the most important cereal diseases worldwide, causing yield losses and contamination of harvested products with mycotoxins. Fusarium graminearum is one of the most common FHB-causing species in wheat and barley cropping systems. We assessed the ability of different botanical extracts to suppress essential stages of the fungal life cycle using three strains of F. graminearum (FG0410, FG2113, and FG1145). The botanicals included aqueous extracts from white mustard (Sinapis alba) seed flour (Pure Yellow Mustard [PYM] and Tillecur [Ti]) as well as milled Chinese galls (CG). At 2% concentration (wt/vol), PYM and Ti completely inhibited growth of mycelium of all F. graminearum strains whereas, at 1%, CG reduced the growth by 65 to 83%, depending on the strain. While PYM and Ti reduced the germination of both conidia and ascospores at 2% (wt/vol), CG was only effective in reducing conidia germination. Perithecia formation of FG0410 but not FG2113 was suppressed by all botanicals. Moreover, application of botanicals on mature perithecia led to a two- to fourfold reduction in discharge of ascospores. Using liquid chromatography (LC) with diode array detection, we quantified the principal glucosinolate component sinalbin of PYM and Ti. LC time-of-flight mass spectrometry was used to demonstrate that the bioactive matrix of CG contains different gallotannins as well as gallic and tannic acids. Possible antifungal mechanisms of the botanical matrices are discussed. The results of this study are promising and suggest that PYM, Ti, and CG should be explored further for efficacy at managing FHB.[Formula: see text] Copyright © 2019 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.
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Affiliation(s)
- Dimitrios Drakopoulos
- Ecological Plant Protection in Arable Crops, Research Division Plant Protection, Agroscope, 8046 Zurich, Switzerland
- Sustainable Agroecosystems, Institute of Agricultural Sciences, Department of Environmental Systems Science, ETH Zurich, 8092 Zurich, Switzerland
| | - Carlos Luz
- Food Chemistry and Toxicology, Faculty of Pharmacy, University of Valencia, 46100 Burjassot, Spain
| | - Raquel Torrijos
- Food Chemistry and Toxicology, Faculty of Pharmacy, University of Valencia, 46100 Burjassot, Spain
| | - Giuseppe Meca
- Food Chemistry and Toxicology, Faculty of Pharmacy, University of Valencia, 46100 Burjassot, Spain
| | - Pascal Weber
- Ecological Plant Protection in Arable Crops, Research Division Plant Protection, Agroscope, 8046 Zurich, Switzerland
| | - Irene Bänziger
- Ecological Plant Protection in Arable Crops, Research Division Plant Protection, Agroscope, 8046 Zurich, Switzerland
| | - Ralf T Voegele
- Department of Phytopathology, Institute of Phytomedicine, Faculty of Agricultural Sciences, University of Hohenheim, 70599 Stuttgart, Germany
| | - Johan Six
- Sustainable Agroecosystems, Institute of Agricultural Sciences, Department of Environmental Systems Science, ETH Zurich, 8092 Zurich, Switzerland
| | - Susanne Vogelgsang
- Ecological Plant Protection in Arable Crops, Research Division Plant Protection, Agroscope, 8046 Zurich, Switzerland
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Ortega LM, Romero L, Moure C, Garmendia G, Ramírez Albuquerque D, Fernández Pinto V, Vero S, Alconada TM. Effect of moisture on wheat grains lipid patterns and infection with Fusarium graminearum. Int J Food Microbiol 2019; 306:108264. [PMID: 31323448 DOI: 10.1016/j.ijfoodmicro.2019.108264] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2019] [Revised: 07/03/2019] [Accepted: 07/09/2019] [Indexed: 10/26/2022]
Abstract
Suitable conditions of temperature and humidity are required to maintain wheat grains quality, but during processing and storage, the grains can be exposed to adverse environmental conditions and presence of infectious fungi. Fusarium graminearum, the main causal agent of Fusarium head blight on wheat, affects crop yields and grain quality by alteration of their biochemical components and mycotoxin contamination, which reduces the possibilities of wheat end use and compromises food safety. Lipid degradation by hydrolytic, oxidative and microbial deterioration is the predominant cause of the loss of sensory acceptability, nutritional value and baking quality. The aim of this research was to determine the influence of adverse environmental conditions -as the increasing moisture - on lipid patterns of whole wheat flours contaminated with F. graminearum in relation to the infection degree. In vitro cultures of F. graminearum were carried out on wheat grains under different degrees of relative humidity (11, 50, 75 and 100%) throughout 45 days of incubation at 28 °C. The fungal biomass measured by q-PCR increased proportionally with the humidity. A decrease in the signals of saturated (palmitic and estearic) and unsaturated (oleic, linoleic and linolenic) fatty acids, analyzed as fatty acid methyl esters (FAMEs) by GC-MS, was observed in relation with the humidity and infection degree. The degradation rate of the lipids was high during the first 15 days of incubation, reaching the fatty acids content, values around 20-40% of those found in the control. From that moment on, the rate of degradation was slower or even null. It was observed that in all treatments, the linolenic acid reached the highest degradation ratio in comparison with the other fatty acids, which may be caused by the action of lipoxygenases. The lipase activity and the content of deoxynivalenol were also determinate on the flours. The lipase activity increased until day 25 of incubation reaching twice the initial value. The deoxynivalenol content also increased along incubation while fatty acids decreased. Our results demonstrated that the magnitude in the signal of fatty acids in whole wheat flours varied in relation to the degree of humidity and fungal infection of the grains from which they were obtained. Otherwise, lipids and their oxidation products are related with the pathogenesis and production of mycotoxins. These observations highlight the importance of an adequate manipulation of wheat grains on the processing chain to prevent quality changes and mycotoxins contamination.
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Affiliation(s)
- Leonel M Ortega
- Centro de Investigación y Desarrollo en Fermentaciones Industriales (CINDEFI), UNLP; CCT-La Plata, CONICET, Facultad de Ciencias Exactas, Calle 47 y 115, (B1900ASH) Universidad Nacional de La Plata, Argentina
| | - Lilian Romero
- Laboratorio de Investigación y Desarrollo de Métodos Analíticos (LIDMA), UNLP; CCT-La Plata, CONICET, Facultad de Ciencias Exactas, Calle 47 y 115, (B1900ASH) Universidad Nacional de La Plata, Argentina
| | - Candela Moure
- Centro de Investigación y Desarrollo en Fermentaciones Industriales (CINDEFI), UNLP; CCT-La Plata, CONICET, Facultad de Ciencias Exactas, Calle 47 y 115, (B1900ASH) Universidad Nacional de La Plata, Argentina
| | - Gabriela Garmendia
- Cátedra de Microbiología, Departamento de Biociencias, Facultad de Química, Universidad de la República, General Flores 2124, 11800 Montevideo, Uruguay
| | - Diana Ramírez Albuquerque
- Laboratorio de Microbiología de Alimentos, Departamento de Química Orgánica, Area Química y Microbiología de Alimentos, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, Pabellón II, 3°Piso, 1428 Buenos Aires, Argentina
| | - Virginia Fernández Pinto
- Laboratorio de Microbiología de Alimentos, Departamento de Química Orgánica, Area Química y Microbiología de Alimentos, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, Pabellón II, 3°Piso, 1428 Buenos Aires, Argentina
| | - Silvana Vero
- Cátedra de Microbiología, Departamento de Biociencias, Facultad de Química, Universidad de la República, General Flores 2124, 11800 Montevideo, Uruguay
| | - Teresa M Alconada
- Centro de Investigación y Desarrollo en Fermentaciones Industriales (CINDEFI), UNLP; CCT-La Plata, CONICET, Facultad de Ciencias Exactas, Calle 47 y 115, (B1900ASH) Universidad Nacional de La Plata, Argentina.
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Effect of temperature on growth, wheat head infection, and nivalenol production by Fusarium poae. Food Microbiol 2018; 76:83-90. [DOI: 10.1016/j.fm.2018.04.015] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2017] [Revised: 04/13/2018] [Accepted: 04/27/2018] [Indexed: 01/06/2023]
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