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Grimes MI, Cheeks M, Smith J, Zurlo F, Mantle MD. Decoupling Protein Concentration and Aggregate Content Using Diffusion and Water NMR. Anal Chem 2024; 96:11155-11162. [PMID: 38943616 PMCID: PMC11256015 DOI: 10.1021/acs.analchem.3c05875] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2023] [Revised: 05/30/2024] [Accepted: 06/18/2024] [Indexed: 07/01/2024]
Abstract
Protein-based biopharmaceutical drugs, such as monoclonal antibodies, account for the majority of the best-selling drugs globally in recent years. For bioprocesses, key performance indicators are the concentration and aggregate level for the product being produced. In water NMR (wNMR), the use of the water transverse relaxation rate [R2(1H2O)] has been previously used to determine protein concentration and aggregate level; however, it cannot be used to separate between them without using an additional technique. This work shows that it is possible to "decouple" these two key characteristics by recording the water diffusion coefficient [D(1H2O)] in conjunction with R2(1H2O), even in the event of overlap in either D(1H2O) or R2(1H2O). This method is demonstrated on three different systems, following appropriate D(1H2O) or R2(1H2O) calibration data acquisition for a protein of interest. Our method highlights the potential use of benchtop NMR as an at-line process analytical technique.
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Affiliation(s)
- Mark I. Grimes
- Department
of Chemical Engineering and Biotechnology, University of Cambridge, Philippa Fawcett Drive, Cambridge CB3 0AS, U.K.
| | - Matthew Cheeks
- Cell
Culture & Fermentation Sciences, Biopharmaceutical Development,
Biopharmaceuticals R&D, AstraZeneca, Francis Crick Avenue, Cambridge CB2 0AA, U.K.
| | - Jennifer Smith
- Cell
Culture & Fermentation Sciences, Biopharmaceutical Development,
Biopharmaceuticals R&D, AstraZeneca, Francis Crick Avenue, Cambridge CB2 0AA, U.K.
| | - Fabio Zurlo
- Cell
Culture & Fermentation Sciences, Biopharmaceutical Development,
Biopharmaceuticals R&D, AstraZeneca, Francis Crick Avenue, Cambridge CB2 0AA, U.K.
| | - Mick D. Mantle
- Department
of Chemical Engineering and Biotechnology, University of Cambridge, Philippa Fawcett Drive, Cambridge CB3 0AS, U.K.
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2
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Ellepola K, Bhatt L, Chen L, Han C, Jahanbazi F, Klie RF, Lagunas Vargas F, Mao Y, Novakovsky K, Sapkota B, Pesavento RP. Nanoceria Aggregate Formulation Promotes Buffer Stability, Cell Clustering, and Reduction of Adherent Biofilm in Streptococcus mutans. ACS Biomater Sci Eng 2023; 9:4686-4697. [PMID: 37450411 DOI: 10.1021/acsbiomaterials.3c00174] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/18/2023]
Abstract
Streptococcus mutans is one of the key etiological factors in tooth-borne biofilm development that leads to dental caries in the presence of fermentable sugars. We previously reported on the ability of acid-stabilized nanoceria (CeO2-NP) produced by the hydrolysis of ceric salts to limit biofilm adherence of S. mutans via non-bactericidal mechanism(s). Herein, we report a chondroitin sulfate A (CSA) formulation (CeO2-NP-CSA) comprising nanoceria aggregates that promotes resistance to bulk precipitation under a range of conditions with retention of the biofilm-inhibiting activity, allowing for a more thorough mechanistic study of its bioactivity. The principal mechanism of reduced in vitro biofilm adherence of S. mutans by CeO2-NP-CSA is the production of nonadherent cell clusters. Additionally, dose-dependent in vitro human cell toxicity studies demonstrated no additional toxicity beyond that of equimolar doses of sodium fluoride, currently utilized in many oral health products. This study represents a unique approach and use of a nanoceria aggregate formulation with implications for promoting oral health and dental caries prevention as an adjunctive treatment.
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Affiliation(s)
- Kassapa Ellepola
- Department of Oral Biology, College of Dentistry, University of Illinois Chicago, 801 S. Paulina Street, Chicago, Illinois 60612, United States
- The Center for Biomolecular Sciences and Department of Medicinal Chemistry and Pharmacognosy, University of Illinois Chicago, 801 S. Paulina Street, Chicago, Illinois 60612, United States
| | - Lopa Bhatt
- Department of Physics, University of Illinois Chicago, 801 S. Paulina Street, Chicago, Illinois 60612, United States
| | - Lin Chen
- Center for Wound Healing and Tissue Regeneration, College of Dentistry, University of Illinois Chicago, 801 S. Paulina Street, Chicago, Illinois 60612, United States
| | - Chen Han
- Center for Wound Healing and Tissue Regeneration, College of Dentistry, University of Illinois Chicago, 801 S. Paulina Street, Chicago, Illinois 60612, United States
| | - Forough Jahanbazi
- Department of Chemistry, Illinois Institute of Technology, 3101 South Dearborn Street, Chicago, Illinois 60616, United States
| | - Robert F Klie
- Department of Physics, University of Illinois Chicago, 801 S. Paulina Street, Chicago, Illinois 60612, United States
| | - Francisco Lagunas Vargas
- Department of Physics, University of Illinois Chicago, 801 S. Paulina Street, Chicago, Illinois 60612, United States
| | - Yuanbing Mao
- Department of Chemistry, Illinois Institute of Technology, 3101 South Dearborn Street, Chicago, Illinois 60616, United States
| | - Kirill Novakovsky
- Department of Oral Biology, College of Dentistry, University of Illinois Chicago, 801 S. Paulina Street, Chicago, Illinois 60612, United States
- The Center for Biomolecular Sciences and Department of Medicinal Chemistry and Pharmacognosy, University of Illinois Chicago, 801 S. Paulina Street, Chicago, Illinois 60612, United States
| | - Bibash Sapkota
- Department of Physics, University of Illinois Chicago, 801 S. Paulina Street, Chicago, Illinois 60612, United States
| | - Russell P Pesavento
- Department of Oral Biology, College of Dentistry, University of Illinois Chicago, 801 S. Paulina Street, Chicago, Illinois 60612, United States
- The Center for Biomolecular Sciences and Department of Medicinal Chemistry and Pharmacognosy, University of Illinois Chicago, 801 S. Paulina Street, Chicago, Illinois 60612, United States
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3
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Laurent H, Baker DL, Soper AK, Ries ME, Dougan L. Solute Specific Perturbations to Water Structure and Dynamics in Tertiary Aqueous Solution. J Phys Chem B 2020; 124:10983-10993. [DOI: 10.1021/acs.jpcb.0c07780] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
| | | | - Alan K. Soper
- ISIS Facility, STFC Rutherford Appleton Laboratory, Didcot OX11 0QX, United Kingdom
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Relaxation and diffusion of water protons in BDDE cross-linked hyaluronic acid hydrogels investigated by NMR spectroscopy—Comparison with physicochemical properties. Carbohydr Polym 2020; 248:116768. [DOI: 10.1016/j.carbpol.2020.116768] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2020] [Revised: 06/23/2020] [Accepted: 07/12/2020] [Indexed: 12/21/2022]
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5
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Rodin VV. NMR techniques in studying water in biotechnological systems. Biophys Rev 2020; 12:683-701. [PMID: 32557162 PMCID: PMC7311624 DOI: 10.1007/s12551-020-00694-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2020] [Accepted: 04/16/2020] [Indexed: 02/07/2023] Open
Abstract
Different NMR methodologies have been considered in studying water as a part of the structure of heterogeneous biosystems. The current work mostly describes NMR techniques to investigate slow translational dynamics of molecules affecting anisotropic properties of polymers and biomaterials. With these approaches, information about organized structures and their stability could be obtained in conditions when external factors affect biomolecules. Such changes might include rearrangement of macromolecular conformations at fabrication of nano-scaffolds for tissue engineering applications. The changes in water-fiber interactions could be mirrored by the magnetic resonance methods in various relaxations, double-quantum filtered (DQF), 1D and 2D translational diffusion experiments. These findings effectively demonstrate the current state of NMR studies in applying these experiments to the various systems with the anisotropic properties. For fibrous materials, it is shown how NMR correlation experiments with two gradients (orthogonal or collinear) encode diffusion coefficients in anisotropic materials and how to estimate the permeability of cell walls. It is considered how the DQF NMR technique discovers anisotropic water in natural polymers with various cross-links. The findings clarify hydration sites, dynamic properties, and binding of macromolecules discovering the role of specific states in improving scaffold characteristics in tissue engineering processes. Showing the results in developing these NMR tools, this review focuses on the ways of extracting information about biophysical properties of biomaterials from the NMR data obtained.
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Affiliation(s)
- Victor V Rodin
- Institute of Organic Chemistry, Johannes Kepler University Linz, Altenbergerstraße 69, 4040, Linz, Austria.
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6
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Poulsen CLN, Clausen MR, Gregersen SB, Bertram HC. Effect of long-term heat exposure on rheological and intrinsic water characteristics of bone-derived beef stocks. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2019; 57:700-706. [PMID: 30644136 DOI: 10.1002/mrc.4831] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2018] [Revised: 12/30/2018] [Accepted: 01/04/2019] [Indexed: 06/09/2023]
Abstract
Bone-derived protein stocks are used in food industry to enhance taste of soups, sauces, and a range of other products. Both during commercial manufacturing and when used for culinary purposes, the stocks may be exposed to high temperatures for an extended time period. The present study investigated the effect of retention at 90°C for 0, 3, 6, 9, 24, 48, 72, and 168 hr on the functional attributes of concentrated bone-derived beef stocks (57% Dry matter (DM)). Visual inspection and rheological analyses showed that during increasing heat exposure, the gel strength as well as viscosity of the concentrated stocks decreased incrementally and significantly (P > 0.001). Nuclear magnetic resonance (NMR) relaxation measurements conducted on the beef stocks also revealed strong effects of heat exposure on the transverse (T2 ) relaxation time, which increased incrementally and significantly (P > 0.001) with longer heat exposure. Thus, the present study demonstrated that heat-induced changes in rheological properties of bone-derived beef stocks can be ascribed to changes in intrinsic water-protein interactions and water attributes as a result of heat-induced protein modifications. In conclusion, the study proves that NMR relaxometry is a valuable tool for monitoring changes in intrinsic water mobility that are manifested in modified functional attributes of concentrated beef stocks.
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Affiliation(s)
| | | | - Sandra Beyer Gregersen
- Department of Food Science, Research Centre Aarslev, Aarhus University, Aarslev, Denmark
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Bonechi C, Consumi M, Matteucci M, Tamasi G, Donati A, Leone G, Menichetti L, Kusmic C, Rossi C, Magnani A. Distribution of Gadolinium in Rat Heart Studied by Fast Field Cycling Relaxometry and Imaging SIMS. Int J Mol Sci 2019; 20:E1339. [PMID: 30884846 PMCID: PMC6471734 DOI: 10.3390/ijms20061339] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2019] [Revised: 02/27/2019] [Accepted: 03/13/2019] [Indexed: 11/23/2022] Open
Abstract
Research on microcirculatory alterations in human heart disease is essential to understand the genesis of myocardial contractile dysfunction and its evolution towards heart failure. The use of contrast agents in magnetic resonance imaging is an important tool in medical diagnostics related to this dysfunction. Contrast agents significantly improve the imaging by enhancing the nuclear magnetic relaxation rates of water protons in the tissues where they are distributed. Gadolinium complexes are widely employed in clinical practice due to their high magnetic moment and relatively long electronic relaxation time. In this study, the behavior of gadolinium ion as a contrast agent was investigated by two complementary methods, relaxometry and secondary ion mass spectrometry. The study examined the distribution of blood flow within the microvascular network in ex vivo Langendorff isolated rat heart models, perfused with Omniscan® contrast agent. The combined use of secondary ion mass spectrometry and relaxometry allowed for both a qualitative mapping of agent distribution as well as the quantification of gadolinium ion concentration and persistence. This combination of a chemical mapping and temporal analysis of the molar concentration of gadolinium ion in heart tissue allows for new insights on the biomolecular mechanisms underlying the microcirculatory alterations in heart disease.
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Affiliation(s)
- Claudia Bonechi
- Department of Biotechnology, Chemistry and Pharmacy, Via Aldo Moro 2, 53100 Siena, Italy.
- Center for Colloids and Surface Science (CSGI), Via della Lastruccia 3, 50019 Sesto Fiorentino, Firenze, Italy.
| | - Marco Consumi
- Department of Biotechnology, Chemistry and Pharmacy, Via Aldo Moro 2, 53100 Siena, Italy.
- National Interuniversity Consortium of Materials Science and Technology (INSTM), Via Giuseppe Giusti 9, 50121 Firenze, Italy.
| | - Marco Matteucci
- CNR Institute of Clinical Physiology, Area di Ricerca "S. Cataldo", Via Giuseppe Moruzzi 1, 56124 Pisa, Italy.
| | - Gabriella Tamasi
- Department of Biotechnology, Chemistry and Pharmacy, Via Aldo Moro 2, 53100 Siena, Italy.
- Center for Colloids and Surface Science (CSGI), Via della Lastruccia 3, 50019 Sesto Fiorentino, Firenze, Italy.
| | - Alessandro Donati
- Department of Biotechnology, Chemistry and Pharmacy, Via Aldo Moro 2, 53100 Siena, Italy.
- Center for Colloids and Surface Science (CSGI), Via della Lastruccia 3, 50019 Sesto Fiorentino, Firenze, Italy.
| | - Gemma Leone
- Department of Biotechnology, Chemistry and Pharmacy, Via Aldo Moro 2, 53100 Siena, Italy.
- National Interuniversity Consortium of Materials Science and Technology (INSTM), Via Giuseppe Giusti 9, 50121 Firenze, Italy.
| | - Luca Menichetti
- CNR Institute of Clinical Physiology, Area di Ricerca "S. Cataldo", Via Giuseppe Moruzzi 1, 56124 Pisa, Italy.
| | - Claudia Kusmic
- CNR Institute of Clinical Physiology, Area di Ricerca "S. Cataldo", Via Giuseppe Moruzzi 1, 56124 Pisa, Italy.
| | - Claudio Rossi
- Department of Biotechnology, Chemistry and Pharmacy, Via Aldo Moro 2, 53100 Siena, Italy.
- Center for Colloids and Surface Science (CSGI), Via della Lastruccia 3, 50019 Sesto Fiorentino, Firenze, Italy.
| | - Agnese Magnani
- Department of Biotechnology, Chemistry and Pharmacy, Via Aldo Moro 2, 53100 Siena, Italy.
- National Interuniversity Consortium of Materials Science and Technology (INSTM), Via Giuseppe Giusti 9, 50121 Firenze, Italy.
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Drying process of pullulan edible films forming solutions studied by low-field NMR. Food Chem 2017; 230:611-617. [DOI: 10.1016/j.foodchem.2017.03.097] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2017] [Revised: 03/11/2017] [Accepted: 03/16/2017] [Indexed: 01/17/2023]
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