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Farrell B, Skidmore BL, Rajasekharan V, Brownell WE. A novel theoretical framework reveals more than one voltage-sensing pathway in the lateral membrane of outer hair cells. J Gen Physiol 2021; 152:151746. [PMID: 32384538 PMCID: PMC7335013 DOI: 10.1085/jgp.201912447] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2019] [Accepted: 03/18/2020] [Indexed: 11/20/2022] Open
Abstract
Outer hair cell (OHC) electromotility amplifies acoustic vibrations throughout the frequency range of hearing. Electromotility requires that the lateral membrane protein prestin undergo a conformational change upon changes in the membrane potential to produce an associated displacement charge. The magnitude of the charge displaced and the mid-reaction potential (when one half of the charge is displaced) reflects whether the cells will produce sufficient gain at the resting membrane potential to boost sound in vivo. Voltage clamp measurements performed under near-identical conditions ex vivo show the charge density and mid-reaction potential are not always the same, confounding interpretation of the results. We compare the displacement charge measurements in OHCs from rodents with a theory shown to exhibit good agreement with in silico simulations of voltage-sensing reactions in membranes. This model equates the charge density to the potential difference between two pseudo-equilibrium states of the sensors when they are in a stable conformation and not contributing to the displacement current. The model predicts this potential difference to be one half of its value midway into the reaction, when one equilibrium conformation transforms to the other pseudo-state. In agreement with the model, we find the measured mid-reaction potential to increase as the charge density decreases to exhibit a negative slope of ∼1/2. This relationship suggests that the prestin sensors exhibit more than one stable hyperpolarized state and that voltage sensing occurs by more than one pathway. We determine the electric parameters for prestin sensors and use the analytical expressions of the theory to estimate the energy barriers for the two voltage-dependent pathways. This analysis explains the experimental results, supports the theoretical approach, and suggests that voltage sensing occurs by more than one pathway to enable amplification throughout the frequency range of hearing.
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Affiliation(s)
- Brenda Farrell
- Bobby R. Alford Department of Otolaryngology and Head & Neck Surgery, Baylor College of Medicine, Houston, TX
| | - Benjamin L Skidmore
- Bobby R. Alford Department of Otolaryngology and Head & Neck Surgery, Baylor College of Medicine, Houston, TX
| | - Vivek Rajasekharan
- Bobby R. Alford Department of Otolaryngology and Head & Neck Surgery, Baylor College of Medicine, Houston, TX
| | - William E Brownell
- Bobby R. Alford Department of Otolaryngology and Head & Neck Surgery, Baylor College of Medicine, Houston, TX
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2
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Farrell B, Bengtson J. Scientist and data architect collaborate to curate and archive an inner ear electrophysiology data collection. PLoS One 2019; 14:e0223984. [PMID: 31626635 PMCID: PMC6799921 DOI: 10.1371/journal.pone.0223984] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2019] [Accepted: 10/02/2019] [Indexed: 11/19/2022] Open
Abstract
In the past scientists reported summaries of their findings; they did not provide their original data collections. Many stakeholders (e.g., funding agencies) are now requesting that such data be made publicly available. This mandate is being adopted to facilitate further discovery, and to mitigate waste and deficits in the research process. At the same time, the necessary infrastructure for data curation (e.g., repositories) has been evolving. The current target is to make research products FAIR (Findable, Accessible, Interoperable, Reusable), resulting in data that are curated and archived to be both human and machine compatible. However, most scientists have little training in data curation. Specifically, they are ill-equipped to annotate their data collections at a level that facilitates discoverability, aggregation, and broad reuse in a context separate from their creation or sub-field. To circumvent these deficits data architects may collaborate with scientists to transform and curate data. This paper's example of a data collection describes the electrical properties of outer hair cells isolated from the mammalian cochlea. The data is expressed with a variant of The Ontology for Biomedical Investigations (OBI), mirrored to provide the metadata and nested data architecture used within the Hierarchical Data Format version 5 (HDF5) format. Each digital specimen is displayed in a tree configuration (like directories in a computer) and consists of six main branches based on the ontology classes. The data collections, scripts, and ontological OWL file (OBI based Inner Ear Electrophysiology (OBI_IEE)) are deposited in three repositories. We discuss the impediments to producing such data collections for public use, and the tools and processes required for effective implementation. This work illustrates the impact that small collaborations can have on the curation of our publicly-funded collections, and is particularly salient for fields where data is sparse, throughput is low, and sacrifice of animals is required for discovery.
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Affiliation(s)
- Brenda Farrell
- Bobby R Alford Department of Otolaryngology and Head & Neck Surgery, Baylor College of Medicine, Houston, Texas, United States of America
| | - Jason Bengtson
- K-State Libraries, Kansas State University, Manhattan, Kansas, United States of America
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3
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Meaud J, Grosh K. Coupling active hair bundle mechanics, fast adaptation, and somatic motility in a cochlear model. Biophys J 2011; 100:2576-85. [PMID: 21641302 DOI: 10.1016/j.bpj.2011.04.049] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2010] [Revised: 03/10/2011] [Accepted: 04/27/2011] [Indexed: 11/18/2022] Open
Abstract
One of the central questions in the biophysics of the mammalian cochlea is determining the contributions of the two active processes, prestin-based somatic motility and hair bundle (HB) motility, to cochlear amplification. HB force generation is linked to fast adaptation of the transduction current via a calcium-dependent process and somatic force generation is driven by the depolarization caused by the transduction current. In this article, we construct a global mechanical-electrical-acoustical mathematical model of the cochlea based on a three-dimensional fluid representation. The global cochlear model is coupled to linearizations of nonlinear somatic motility and HB activity as well as to the micromechanics of the passive structural and electrical elements of the cochlea. We find that the active HB force alone is not sufficient to power high frequency cochlear amplification. However, somatic motility can overcome resistor-capacitor filtering by the basolateral membrane and deliver sufficient mechanical energy for amplification at basal locations. The results suggest a new theory for high frequency active cochlear mechanics, in which fast adaptation controls the transduction channel sensitivity and thereby the magnitude of the energy delivered by somatic motility.
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MESH Headings
- Acoustic Stimulation
- Adaptation, Physiological/drug effects
- Basilar Membrane/cytology
- Basilar Membrane/drug effects
- Biomechanical Phenomena
- Calcium/metabolism
- Cell Movement/drug effects
- Electric Conductivity
- Hair Cells, Auditory, Outer/cytology
- Hair Cells, Auditory, Outer/drug effects
- Hair Cells, Auditory, Outer/metabolism
- Hair Cells, Auditory, Outer/physiology
- Hearing/drug effects
- Hearing/physiology
- Mechanical Phenomena
- Mechanotransduction, Cellular/drug effects
- Models, Biological
- Salicylic Acid/pharmacology
- Time Factors
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Affiliation(s)
- Julien Meaud
- Department of Mechanical Engineering, University of Michigan, Ann Arbor, Michigan, USA.
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Prestin-driven cochlear amplification is not limited by the outer hair cell membrane time constant. Neuron 2011; 70:1143-54. [PMID: 21689600 PMCID: PMC3143834 DOI: 10.1016/j.neuron.2011.04.024] [Citation(s) in RCA: 193] [Impact Index Per Article: 14.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 04/26/2011] [Indexed: 11/21/2022]
Abstract
Outer hair cells (OHCs) provide amplification in the mammalian cochlea using somatic force generation underpinned by voltage-dependent conformational changes of the motor protein prestin. However, prestin must be gated by changes in membrane potential on a cycle-by-cycle basis and the periodic component of the receptor potential may be greatly attenuated by low-pass filtering due to the OHC time constant (τm), questioning the functional relevance of this mechanism. Here, we measured τm from OHCs with a range of characteristic frequencies (CF) and found that, at physiological endolymphatic calcium concentrations, approximately half of the mechanotransducer (MT) channels are opened at rest, depolarizing the membrane potential to near −40 mV. The depolarized resting potential activates a voltage-dependent K+ conductance, thus minimizing τm and expanding the membrane filter so there is little receptor potential attenuation at the cell's CF. These data suggest that minimal τm filtering in vivo ensures optimal activation of prestin.
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Liao Z, Feng S, Popel AS, Brownell WE, Spector AA. Outer hair cell active force generation in the cochlear environment. THE JOURNAL OF THE ACOUSTICAL SOCIETY OF AMERICA 2007; 122:2215-25. [PMID: 17902857 DOI: 10.1121/1.2776154] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
Abstract
Outer hair cells are critical to the amplification and frequency selectivity of the mammalian ear acting via a fine mechanism called the cochlear amplifier, which is especially effective in the high-frequency region of the cochlea. How this mechanism works under physiological conditions and how these cells overcome the viscous (mechanical) and electrical (membrane) filtering has yet to be fully understood. Outer hair cells are electromotile, and they are strategically located in the cochlea to generate an active force amplifying basilar membrane vibration. To investigate the mechanism of this cell's active force production under physiological conditions, a model that takes into account the mechanical, electrical, and mechanoelectrical properties of the cell wall (membrane) and cochlear environment is proposed. It is shown that, despite the mechanical and electrical filtering, the cell is capable of generating a frequency-tuned force with a maximal value of about 40 pN. It is also found that the force per unit basilar membrane displacement stays essentially the same (40 pNnm) for the entire linear range of the basilar membrane responses, including sound pressure levels close to hearing threshold. Our findings can provide a better understanding of the outer hair cell's role in the cochlear amplifier.
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Affiliation(s)
- Zhijie Liao
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland 21205, USA
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Nowotny M, Gummer AW. Nanomechanics of the subtectorial space caused by electromechanics of cochlear outer hair cells. Proc Natl Acad Sci U S A 2006; 103:2120-5. [PMID: 16461888 PMCID: PMC1413757 DOI: 10.1073/pnas.0511125103] [Citation(s) in RCA: 98] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2005] [Indexed: 11/18/2022] Open
Abstract
The stereocilia of the cochlear inner hair cells (IHCs) transduce vibrations into the sensory receptor current. Until now, mechanisms for deflecting these stereocilia have not been identified experimentally. Here, we identify a mechanism by using the electromechanical properties of the soma of the outer hair cell to produce an intracochlear, mechanical force stimulus. It is known that the soma of this cell generates mechanical force in response to a change of its transmembrane potential. In the present experiments, the force was induced by intracochlear electrical stimulation at frequencies that covered the entire functionally relevant range of 50 kHz. Vibration responses were measured in the transverse direction with a laser Doppler vibrometer. For frequencies up to approximately 3 kHz in the first three turns of the guinea-pig cochlea, the apical surface of the IHC and the opposing surface of the tectorial membrane were found to vibrate with similar amplitudes but opposite phases. At high frequencies, there was little relative motion between these surfaces in the transverse direction. The counterphasic motion up to approximately 3 kHz results in a pulsatile motion of the fluid surrounding the stereocilia of the IHCs. Based on physical principles of fluid flow between narrowly spaced elastic plates, we show that radial fluid motion is amplified relative to transverse membrane motion and that the radial motion is capable of bending the stereocilia. In conclusion, for frequencies up to at least 3 kHz, there appears to be direct fluid coupling between outer hair cells and IHCs.
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Affiliation(s)
- Manuela Nowotny
- Department of Otolaryngology, Tübingen Hearing Research Centre, Section of Physiological Acoustics and Communication, University of Tübingen, Elfriede-Aulhorn-Strasse 5, 72076 Tübingen, Germany
| | - Anthony W. Gummer
- Department of Otolaryngology, Tübingen Hearing Research Centre, Section of Physiological Acoustics and Communication, University of Tübingen, Elfriede-Aulhorn-Strasse 5, 72076 Tübingen, Germany
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7
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Bian L, Chertoff ME, Miller E. Deriving a cochlear transducer function from low-frequency modulation of distortion product otoacoustic emissions. THE JOURNAL OF THE ACOUSTICAL SOCIETY OF AMERICA 2002; 112:198-210. [PMID: 12141345 DOI: 10.1121/1.1488943] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
In this paper, a new method is introduced to derive a cochlear transducer function from measuring distortion product otoacoustic emissions (DPOAEs). It is shown that the cubic difference tone (CDT, 2f1-f2) is produced from the odd-order terms of a power series that approximates a nonlinear function characterizing cochlear transduction. Exploring the underlying mathematical formulation, it is found that the CDT is proportional to the third derivative of the transduction function when the primary levels are sufficiently small. DPOAEs were measured from nine gerbils in response to two-tone signals biased by a low-frequency tone with different amplitudes. The CDT magnitude was obtained at the peak regions of the bias tone. The results of the experiment demonstrated that the shape of the CDT magnitudes as a function of bias levels was similar to the absolute value of the third derivative of a sigmoidal function. A second-order Boltzmann function was derived from curve fitting the CDT data with an equation that represents the third derivative of the Boltzmann function. Both the CDT-bias function and the derived nonlinear transducer function showed effects of primary levels. The results of the study indicate that the low-frequency modulated DPOAEs can be used to estimate the cochlear transducer function.
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Affiliation(s)
- Lin Bian
- Hearing and Speech Department, University of Kansas Medical Center, Kansas City 66160, USA.
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8
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Kros CJ. Physiology of Mammalian Cochlear Hair Cells. SPRINGER HANDBOOK OF AUDITORY RESEARCH 1996. [DOI: 10.1007/978-1-4612-0757-3_6] [Citation(s) in RCA: 50] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
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Abstract
Outer hair cells undergo somatic elongation-contraction cycles in vitro when electrically stimulated. This "electromotile" response is assumed to underlie the high sensitivity and frequency selectivity of amplification in the mammalian cochlea. This process, presumably operating on a cycle-by-cycle basis at the frequency of the stimulus, is believed to provide mechanical feedback in vivo. However, if driven by the receptor potential of the cell, the mechanical feedback is expected to be severely attenuated at high frequencies because of electrical low-pass filtering by the outer hair cell basolateral membrane. It is proposed that electromotility at high frequencies is driven instead by extracellular potential gradients across the hair cell, and it is shown that this driving voltage is not subject to low-pass filtering and is sufficiently large. It is further shown that if the filtering properties of the cell membrane are canceled, taking advantage of the electrical characteristics of isolated outer hair cells in a partitioning glass microchamber, then the lower bound of the motor's bandwidth is approximately 22 kilohertz, a number determined only by the limitations of our instrumentation.
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Affiliation(s)
- P Dallos
- Department of Neurobiology and Physiology, Northwestern University, Evanston, Illinois 60208, USA
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10
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Raina R, Cook D, Fedoroff N. Maize Spm transposable element has an enhancer-insensitive promoter. Proc Natl Acad Sci U S A 1993; 90:6355-9. [PMID: 8392198 PMCID: PMC46927 DOI: 10.1073/pnas.90.13.6355] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023] Open
Abstract
We have used a transient assay system to investigate the promoter region of the maize Suppressor-mutator (Spm) transposable element. All of the sequence required for constitutive promoter activity is confined to the 0.2-kb sequence upstream from the transcription start site of the element at nt 209 and designated the upstream control region. The element's promoter is weak, lacks a conventional TATA box, and depends on the presence of multiple, short repetitive sequence elements. The Spm promoter is quite insensitive to the enhancer sequence of the cauliflower mosaic virus 35S promoter. Enhancer sensitivity can be restored by providing a -30 TATA sequence and removing the G + C-rich sequence encoding the untranslated leader of the element, designated the downstream control region. Although the downstream control region is without effect on Spm promoter activity, it completely inhibits the 35S core promoter and markedly inhibits activity of the complete 35S promoter. The properties of the Spm element's promoter buffer it from both mutational and position-dependent changes in activity. We suggest that the inherent characteristics of the promoter are part of the genetic mechanism that controls the element's transposition frequency, ensuring it remains low and insertion-site independent.
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Affiliation(s)
- R Raina
- Department of Embryology, Carnegie Institution of Washington, Baltimore, MD 21210
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11
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Russell IJ, Kössl M. Sensory transduction and frequency selectivity in the basal turn of the guinea-pig cochlea. Philos Trans R Soc Lond B Biol Sci 1992; 336:317-24. [PMID: 1354370 DOI: 10.1098/rstb.1992.0064] [Citation(s) in RCA: 25] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Receptor potentials recorded from outer hair cells (OHC) and inner hair cells (IHC) in the basal high-frequency turn were compared. The DC component of the IHC receptor potential is maximized to ensure that IHCS can signal a voltage response to high-frequency tones. The OHC DC component is minimized so that OHCS transduce in the most sensitive region of their operating range. The phase and magnitude of OHC receptor potentials were recorded as an indicator of the magnitude and phase of the energy which is fed back to the basilar membrane to provide the basis for the sharp tuning and fine sensitivity of the cochlea to tones. IHC receptor potentials were recorded to assess the net effect of the feedback on the mechanics of the cochlea. It was concluded that OHCS generate feedback which enhances the IHC responses only at the best frequency. At frequencies below CF, IHC DC responses are elicited only when the OHC AC responses begin to saturate.
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Affiliation(s)
- I J Russell
- School of Biological Science, University of Sussex, Falmer, Brighton, U.K
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