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Engel T, Blowes SA, McGlinn DJ, Gotelli NJ, McGill BJ, Chase JM. How does variation in total and relative abundance contribute to gradients of species diversity? Ecol Evol 2022; 12:e9196. [PMID: 35991281 PMCID: PMC9382643 DOI: 10.1002/ece3.9196] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2022] [Accepted: 07/19/2022] [Indexed: 11/06/2022] Open
Abstract
Patterns of biodiversity provide insights into the processes that shape biological communities around the world. Variation in species diversity along biogeographical or ecological gradients, such as latitude or precipitation, can be attributed to variation in different components of biodiversity: changes in the total abundance (i.e., more-individual effects) and changes in the regional species abundance distribution (SAD). Rarefaction curves can provide a tool to partition these sources of variation on diversity, but first must be converted to a common unit of measurement. Here, we partition species diversity gradients into components of the SAD and abundance using the effective number of species (ENS) transformation of the individual-based rarefaction curve. Because the ENS curve is unconstrained by sample size, it can act as a standardized unit of measurement when comparing effect sizes among different components of biodiversity change. We illustrate the utility of the approach using two data sets spanning latitudinal diversity gradients in trees and marine reef fish and find contrasting results. Whereas the diversity gradient of fish was mostly associated with variation in abundance (86%), the tree diversity gradient was mostly associated with variation in the SAD (59%). These results suggest that local fish diversity may be limited by energy through the more-individuals effect, while species pool effects are the larger determinant of tree diversity. We suggest that the framework of the ENS-curve has the potential to quantify the underlying factors influencing most aspects of diversity change.
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Affiliation(s)
- Thore Engel
- Institute of Computer Science Martin Luther University Halle-Wittenberg Halle (Saale) Germany.,German Centre for Integrative Biodiversity Research (iDiv) Leipzig Germany
| | - Shane A Blowes
- Institute of Computer Science Martin Luther University Halle-Wittenberg Halle (Saale) Germany.,German Centre for Integrative Biodiversity Research (iDiv) Leipzig Germany
| | - Daniel J McGlinn
- Department of Biology College of Charleston Charleston South Carolina USA
| | | | - Brian J McGill
- School of Biology and Ecology, and Senator George J. Mitchell Center of Sustainability Solutions University of Maine Orono Maine USA
| | - Jonathan M Chase
- Institute of Computer Science Martin Luther University Halle-Wittenberg Halle (Saale) Germany.,German Centre for Integrative Biodiversity Research (iDiv) Leipzig Germany
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Tsai CH, Sweatman HPA, Thibaut LM, Connolly SR. Volatility in coral cover erodes niche structure, but not diversity, in reef fish assemblages. SCIENCE ADVANCES 2022; 8:eabm6858. [PMID: 35704577 PMCID: PMC9200288 DOI: 10.1126/sciadv.abm6858] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2021] [Accepted: 05/02/2022] [Indexed: 05/26/2023]
Abstract
The world's coral reefs are experiencing increasing volatility in coral cover, largely because of anthropogenic environmental change, highlighting the need to understand how such volatility will influence the structure and dynamics of reef assemblages. These changes may influence not only richness or evenness but also the temporal stability of species' relative abundances (temporal beta-diversity). Here, we analyzed reef fish assemblage time series from the Great Barrier Reef to show that, overall, 75% of the variance in abundance among species was attributable to persistent differences in species' long-term mean abundances. However, the relative importance of stochastic fluctuations in abundance was higher on reefs that experienced greater volatility in coral cover, whereas it did not vary with drivers of alpha-diversity. These findings imply that increased coral cover volatility decreases temporal stability in relative abundances of fishes, a transformation that is not detectable from static measures of biodiversity.
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Affiliation(s)
- Cheng-Han Tsai
- College of Science and Engineering, James Cook University, Townsville, QLD 4811, Australia
- Australian Institute of Marine Science, Townsville MC, QLD 4810, Australia
- Australian Research Council Centre of Excellence for Coral Reef Studies, Townsville, QLD 4811, Australia
| | | | - Loïc M. Thibaut
- School of Mathematics and Statistics, University of New South Wales, Sydney, NSW 2052, Australia
- Centre for Population Genomics, Garvan Institute of Medical Research and UNSW Sydney, Sydney, NSW, Australia
- Centre for Population Genomics, Murdoch Children’s Research Institute, Melbourne, VIC, Australia
| | - Sean R. Connolly
- College of Science and Engineering, James Cook University, Townsville, QLD 4811, Australia
- Australian Research Council Centre of Excellence for Coral Reef Studies, Townsville, QLD 4811, Australia
- Smithsonian Tropical Research Institute, Panama, Republic of Panama
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Qiao X, Zhang N, Zhang C, Zhang Z, Zhao X, Gadow K. Unravelling biodiversity–productivity relationships across a large temperate forest region. Funct Ecol 2021. [DOI: 10.1111/1365-2435.13922] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Xuetao Qiao
- Research Center of Forest Management Engineering of State Forestry and Grassland Administration Beijing Forestry University Beijing China
| | - Naili Zhang
- Research Center of Forest Management Engineering of State Forestry and Grassland Administration Beijing Forestry University Beijing China
| | - Chunyu Zhang
- Research Center of Forest Management Engineering of State Forestry and Grassland Administration Beijing Forestry University Beijing China
| | - Zhonghui Zhang
- Jilin Provincial Academy of Forestry Sciences Changchun China
| | - Xiuhai Zhao
- Research Center of Forest Management Engineering of State Forestry and Grassland Administration Beijing Forestry University Beijing China
| | - Klaus Gadow
- Faculty of Forestry and Forest Ecology Georg‐August‐University Göttingen Göttingen Germany
- Department of Forest and Wood Science University of Stellenbosch Stellenbosch South Africa
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McGlinn DJ, Engel T, Blowes SA, Gotelli NJ, Knight TM, McGill BJ, Sanders NJ, Chase JM. A multiscale framework for disentangling the roles of evenness, density, and aggregation on diversity gradients. Ecology 2020; 102:e03233. [PMID: 33098569 PMCID: PMC7900956 DOI: 10.1002/ecy.3233] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/22/2019] [Revised: 05/27/2020] [Accepted: 06/09/2020] [Indexed: 11/16/2022]
Abstract
Disentangling the drivers of diversity gradients can be challenging. The Measurement of Biodiversity (MoB) framework decomposes scale‐dependent changes in species diversity into three components of community structure: species abundance distribution (SAD), total community abundance, and within‐species spatial aggregation. Here we extend MoB from categorical treatment comparisons to quantify variation along continuous geographic or environmental gradients. Our approach requires sites along a gradient, each consisting of georeferenced plots of abundance‐based species composition data. We demonstrate our method using a case study of ants sampled along an elevational gradient of 28 sites in a mixed deciduous forest of the Great Smoky Mountains National Park, USA. MoB analysis revealed that decreases in ant species richness along the elevational gradient were associated with decreasing evenness and total number of species, which counteracted the modest increase in richness associated with decreasing spatial aggregation along the gradient. Total community abundance had a negligible effect on richness at all but the finest spatial grains, SAD effects increased in importance with sampling effort, and the aggregation effect had the strongest effect at coarser spatial grains. These results do not support the more‐individuals hypothesis, but they are consistent with a hypothesis of stronger environmental filtering at coarser spatial grains. Our extension of MoB has the potential to elucidate how components of community structure contribute to changes in diversity along environmental gradients and should be useful for a variety of assemblage‐level data collected along gradients.
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Affiliation(s)
- Daniel J McGlinn
- Department of Biology, College of Charleston, Charleston, South Carolina, 29424, USA
| | - Thore Engel
- German Centre for Integrative Biodiversity Research (iDiv), Halle-Jena-Leipzig, Leipzig, 04103, Germany.,Institute of Computer Science, Martin Luther University Halle-Wittenberg, Halle (Saale), 06120, Germany
| | - Shane A Blowes
- German Centre for Integrative Biodiversity Research (iDiv), Halle-Jena-Leipzig, Leipzig, 04103, Germany.,Institute of Computer Science, Martin Luther University Halle-Wittenberg, Halle (Saale), 06120, Germany
| | - Nicholas J Gotelli
- Department of Biology, University of Vermont, Burlington, Vermont, 05405, USA
| | - Tiffany M Knight
- German Centre for Integrative Biodiversity Research (iDiv), Halle-Jena-Leipzig, Leipzig, 04103, Germany.,Institute of Biology, Martin Luther University Halle-Wittenberg, Halle (Saale), 06120, Germany.,Department of Community Ecology, Helmholtz Centre for Environmental Research-UFZ, Halle (Saale), 06120, Germany
| | - Brian J McGill
- School of Biology and Ecology, and Senator George J. Mitchell Center of Sustainability Solutions, University of Maine, Orono, Maine, 04469, USA
| | - Nathan J Sanders
- Environmental Program, Rubenstein School of Environment and Natural Resources, University of Vermont, Burlington, Vermont, 05405, USA
| | - Jonathan M Chase
- German Centre for Integrative Biodiversity Research (iDiv), Halle-Jena-Leipzig, Leipzig, 04103, Germany.,Institute of Computer Science, Martin Luther University Halle-Wittenberg, Halle (Saale), 06120, Germany
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DeMalach N, Saiz H, Zaady E, Maestre FT. Plant species-area relationships are determined by evenness, cover and aggregation in drylands worldwide. GLOBAL ECOLOGY AND BIOGEOGRAPHY : A JOURNAL OF MACROECOLOGY 2019; 28:290-299. [PMID: 30886537 PMCID: PMC6420124 DOI: 10.1111/geb.12849] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
AIM Species-area relationships (also known as 'species-area curves' and 'species accumulation curves') represent the relationship between species richness and the area sampled in a given community. These relationships can be used to describe diversity patterns while accounting for the well-known scale-dependence of species richness. Despite their value, their functional form and parameters, as well as their determinants, have barely been investigated in drylands. LOCATION 171 drylands from all continents except Antarctica. TIME PERIOD 2006-2013. MAJOR TAXA STUDIED Perennial plants. METHODS We characterized species-area relationships of plant communities by building accumulation curves describing the expected number of species as a function of the number of sampling units, and later compared the fit of three functions (power-law, logarithmic and Michaelis-Menten). We tested the prediction that the effects of aridity, soil pH on SAR are mediated by vegetation attributes such as evenness, cover, and spatial aggregation. RESULTS We found that the logarithmic relationship was the most common functional form (c.50%), followed by Michaelis-Menten (c.33%) and power-law (c.17%). Functional form was mainly determined by evenness. Power-law relationships were found mostly under low evenness, logarithmic relationships peaked under intermediate evenness and the Michalis-Menten function increased in frequency with increasing evenness. The SAR parameters approximated by the logarithmic model ('small-scale richness' (b0 ) and 'accumulation coefficient' (b1 )) were determined by vegetation attributes. Increasing spatial aggregation had a negative effect on the small-scale richness and a positive effect on the accumulation coefficient, while evenness had an opposite effect. In addition, accumulation coefficient was positively affected by cover. Interestingly, aridity decreased small scale richness but did not affect the accumulation coefficient. MAIN CONCLUSIONS Our findings highlight the role of evenness, spatial aggregation and cover as main drivers of species area relationships in drylands, the Earth's largest biome.
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Affiliation(s)
- Niv DeMalach
- Department of Biology, Stanford University, Stanford, California 94305, USA
| | - Hugo Saiz
- Departmento de Biología y Geología, Física y Química Inorgánica, Universidad Rey Juan Carlos, c/ Tulipán s/n, 28933 Móstoles, Spain
| | - Eli Zaady
- Department of Natural Resources, Institute of Plant Sciences, Agriculture Research Organization, Ministry of Agriculture, Gilat Research Center, Gilat 85280, Israel
| | - Fernando T. Maestre
- Departmento de Biología y Geología, Física y Química Inorgánica, Universidad Rey Juan Carlos, c/ Tulipán s/n, 28933 Móstoles, Spain
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Keil P, Chase JM. Global patterns and drivers of tree diversity integrated across a continuum of spatial grains. Nat Ecol Evol 2019; 3:390-399. [DOI: 10.1038/s41559-019-0799-0] [Citation(s) in RCA: 52] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2018] [Accepted: 01/07/2019] [Indexed: 01/01/2023]
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McGlinn DJ, Xiao X, May F, Gotelli NJ, Engel T, Blowes SA, Knight TM, Purschke O, Chase JM, McGill BJ. Measurement of Biodiversity (MoB): A method to separate the scale‐dependent effects of species abundance distribution, density, and aggregation on diversity change. Methods Ecol Evol 2018. [DOI: 10.1111/2041-210x.13102] [Citation(s) in RCA: 66] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Affiliation(s)
| | - Xiao Xiao
- School of Biology and Ecology, and Senator George J. Mitchell Center of Sustainability SolutionsUniversity of Maine Orono Maine
| | - Felix May
- Leuphana University Lüneburg Lüneburg Germany
- German Centre for Integrative Biodiversity Research (iDiv)Halle‐Jena‐Leipzig Leipzig Germany
| | | | - Thore Engel
- German Centre for Integrative Biodiversity Research (iDiv)Halle‐Jena‐Leipzig Leipzig Germany
| | - Shane A. Blowes
- German Centre for Integrative Biodiversity Research (iDiv)Halle‐Jena‐Leipzig Leipzig Germany
| | - Tiffany M. Knight
- German Centre for Integrative Biodiversity Research (iDiv)Halle‐Jena‐Leipzig Leipzig Germany
- Institute of BiologyMartin Luther University Halle‐Wittenberg Halle (Saale) Germany
- Department of Community EcologyHelmholtz Centre for Environmental Research – UFZ Halle (Saale) Germany
| | - Oliver Purschke
- German Centre for Integrative Biodiversity Research (iDiv)Halle‐Jena‐Leipzig Leipzig Germany
| | - Jonathan M. Chase
- German Centre for Integrative Biodiversity Research (iDiv)Halle‐Jena‐Leipzig Leipzig Germany
- Department of Computer ScienceMartin Luther University, Halle‐Wittenberg Leipzig Germany
| | - Brian J. McGill
- School of Biology and Ecology, and Senator George J. Mitchell Center of Sustainability SolutionsUniversity of Maine Orono Maine
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Chase JM, McGill BJ, McGlinn DJ, May F, Blowes SA, Xiao X, Knight TM, Purschke O, Gotelli NJ. Embracing scale‐dependence to achieve a deeper understanding of biodiversity and its change across communities. Ecol Lett 2018; 21:1737-1751. [DOI: 10.1111/ele.13151] [Citation(s) in RCA: 140] [Impact Index Per Article: 23.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2018] [Revised: 02/19/2018] [Accepted: 08/02/2018] [Indexed: 01/19/2023]
Affiliation(s)
- Jonathan M. Chase
- German Centre for Integrative Biodiversity Research (iDiv) Halle‐Jena‐Leipzig Deutscher Platz 5e 04103 Leipzig Germany
- Department of Computer Science Martin Luther University 06099 Halle Germany
| | - Brian J. McGill
- School of Biology and Ecology University of Maine Orono ME 04469 USA
- Mitchell Center for Sustainability Solutions University of Maine Orono ME 04469 USA
| | | | - Felix May
- German Centre for Integrative Biodiversity Research (iDiv) Halle‐Jena‐Leipzig Deutscher Platz 5e 04103 Leipzig Germany
- Leuphana University Lüneburg Universitätsallee 1 D‐21335 Lüneburg Germany
| | - Shane A. Blowes
- German Centre for Integrative Biodiversity Research (iDiv) Halle‐Jena‐Leipzig Deutscher Platz 5e 04103 Leipzig Germany
| | - Xiao Xiao
- School of Biology and Ecology University of Maine Orono ME 04469 USA
| | - Tiffany M. Knight
- German Centre for Integrative Biodiversity Research (iDiv) Halle‐Jena‐Leipzig Deutscher Platz 5e 04103 Leipzig Germany
- Department Community Ecology Helmholtz Centre for Environmental Research – UFZ Theodor‐Lieser‐Strasse 4 06120 Halle Germany
- Institute of Biology Martin Luther University Halle‐Wittenberg Am Kirchtor 1 06108 Halle Germany
| | - Oliver Purschke
- German Centre for Integrative Biodiversity Research (iDiv) Halle‐Jena‐Leipzig Deutscher Platz 5e 04103 Leipzig Germany
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