Velocity autocorrelation function of interacting Brownian particles

Simulation of nano elastic polymer chain displacement under pressure gradient/electroosmotic flow with the target of less dispersion of transition

Since non-scattering transfer of polymer chain in nanochannel is one of the important issue in biology, in this research, the behavior study of a long polymer chain in the nanofluid in two modes of free motion and restricted motion (fixed two ends) under two different forces including constant force (pressure gradient (PG)) and variable force (electroosmotic force (EOF)) has been investigated using dissipative particle dynamics (DPD) method. Our aim is that displacement of polymer chain carries out with less dispersion. Initially, without the presence of polymer, the results have been validated in a nanochannel by analytical results for both cases (PG, EOF) with an error of less than 10%. Then, assuming 50 beads of polymer chain, the polymer chain motion in free motion and fixed two ends modes has been examined by different spring coefficients between beads and different forces including PG (0.01 DPD unite) and EOF (zeta potential =  − 25 mV, electric field = 250 V/mm, kh parameter = 8). The results show that in free polymer motion-PG mode, by increasing 1.6 times of spring coefficient of the polymer, a 40% reduction in transition of polymer is achieved, which high dispersion of polymer chain is resulted for this mode. In the EOF, the spring coefficient has a slight effect on transferring of polymer and also, EOF moves the polymer chain with extremely low polymer chain scattering. Also, for fixed two ends-PG mode, a 36% reduction in displacement is achieved and in the same way, in EOF almost 39% declining in displacement is resulted by enhancing the spring coefficients. The results have developed to 25 and 100 beads which less dispersion of polymer chain transfer for free polymer chain-EOF is reported again for both circumstances and for restricted polymer chain state in two PG and EOF modes, less differences are reported for two cases. The results show that the EOF has the benefit of low dispersion for free polymer chain transfer, also, almost equal displacement for restricted polymer chain mode is observed for both cases.

Towards bio-inspired artificial muscle: a mechanism based on electro-osmotic flow simulated using dissipative particle dynamics

One of the unresolved issues in physiology is how exactly myosin moves in a filament as the smallest responsible organ for contracting of a natural muscle. In this research, inspired by nature, a model is presented consisting of DPD (dissipative particle dynamics) particles driven by electro-osmotic flow (EOF) in micro channel that a thin movable impermeable polymer membrane has been attached across channel width, thus momentum of fluid can directly transfer to myosin stem. At the first, by validation of electro-osmotic flow in micro channel in different conditions with accuracy of less than 10 percentage error compared to analytical results, the DPD results have been developed to displacement of an impermeable polymer membrane in EOF. It has been shown that by the presence of electric field of 250 V/m and Zeta potential − 25 mV and the dimensionless ratio of the channel width to the thickness of the electric double layer or kH = 8, about 15% displacement in 8 s time will be obtained compared to channel width. The influential parameters on the displacement of the polymer membrane from DPD particles in EOF such as changes in electric field, ion concentration, zeta potential effect, polymer material and the amount of membrane elasticity have been investigated which in each cases, the radius of gyration and auto correlation velocity of different polymer membrane cases have been compared together. This simulation method in addition of probably helping understand natural myosin displacement mechanism, can be extended to design the contraction of an artificial muscle tissue close to nature.

Collinear velocity relaxation of two spheres in a viscous incompressible fluid

Collinear velocity relaxation of two spheres immersed in a viscous incompressible fluid is studied on the basis of an approximate expression for the retarded hydrodynamic interaction. After a sudden impulse applied to one sphere, the other one instantaneously starts to move as well, with amplitude determined by the added mass effect. The velocities of both spheres eventually decay with a t^{-3/2} long-time tail, but the relative velocity decays with a t^{-5/2} long-time tail. The three relaxation functions are approximated by simple expressions involving only a small number of poles in the complex square root of frequency plane.

111 years of Brownian motion

We consider the Brownian motion of a particle and present a tutorial review over the last 111 years since Einstein's paper in 1905. We describe Einstein's model, Langevin's model and the hydrodynamic models, with increasing sophistication on the hydrodynamic interactions between the particle and the fluid. In recent years, the effects of interfaces on the nearby Brownian motion have been the focus of several investigations. We summarize various results and discuss some of the controversies associated with new findings about the changes in Brownian motion induced by the interface.

Effect of surface elasticity on the motion of a droplet in a viscous fluid

The motion of a droplet with adsorption layer in a viscous incompressible fluid is studied on the basis of the linearized Navier-Stokes equations. It is shown that dilatational elasticity of the layer has a strong effect on the decay of velocity after a sudden impulse. If the elasticity is sufficiently strong the droplet shows backtracking, i.e., during part of the time the velocity relaxation function becomes negative. The motion is independent of the surface shear modulus or surface shear viscosity. The friction coefficient of the droplet at zero frequency is the same as for a rigid sphere with stick boundary conditions, independent of the elasticity modulus.

Effect of the wall on the velocity autocorrelation function and long-time tail of Brownian motion in a viscous compressible fluid

Brownian motion of a particle situated near a wall bounding the fluid in which it is immersed is affected by the wall. Specifically, it is assumed that a viscous compressible fluid fills a half space bounded by a plane wall, and that the fluid flow satisfies stick boundary conditions at the wall. The fluctuation-dissipation theorem shows that the velocity autocorrelation function of the Brownian particle can be calculated from the frequency-dependent admittance valid locally. The admittance can be found from the linearized Navier-Stokes equations. The t(-3/2) long-time tail of the velocity relaxation function, valid in bulk fluid, is obliterated by the wall and replaced by a t(-5/2) long-time tail of positive amplitude for motions parallel to the wall and by a t(-5/2) long-time tail of negative amplitude for motions perpendicular to the wall. In both cases the amplitude of the t(-5/2) long-time tail turns out to be independent of fluid compressibility and bulk viscosity.

Effect of the wall on the velocity autocorrelation function and long-time tail of Brownian motion

Brownian motion of a particle situated near a wall bounding the fluid in which it is immersed is affected by the wall. Specifically, it is assumed that an incompressible viscous fluid fills a half-space bounded by a plane wall and that the fluid flow satisfies stick boundary conditions at the wall. The fluctuation-dissipation theorem shows that the velocity autocorrelation function of the Brownian particle can be calculated from the frequency-dependent admittance valid locally. It is shown that the t(-3/2) long-time tail of the velocity relaxation function, valid in bulk fluid, is obliterated and replaced by a t(-5/2) long-time tail of positive amplitude for motions parallel to the wall and by a t(-5/2) long-time tail of negative amplitude for motions perpendicular to the wall. The latter finding is at variance with an earlier calculation by Gotoh and Kaneda.

Long-time tails of translational and rotational Brownian motion in a suspension of hard spheres

The long-time translational and rotational Brownian motion of a sphere in a suspension of hard spheres is studied on the basis of the linearized Navier-Stokes equations and the fluctuation-dissipation theorem. It is shown that for the rotational long-time coefficient an effective medium conjecture is incorrect. There are short-range velocity correlations that decay at the same rate as the macroscopic flow pattern used in the effective medium conjecture. An estimate of the short-range correction is made on the basis of the pair term in the cluster expansion of the rotational admittance.

Backtracking of a sphere slowing down in a viscous compressible fluid

It is shown on the basis of the linearized Navier-Stokes equations that a sphere set in motion by a sudden impulse, and slowing down in a viscous compressible fluid, can temporarily reverse its velocity at a late stage of the motion before finally slowing down with a positive velocity. For the effect to occur, the fluid needs to be sufficiently compressible, and the bulk viscosity needs to be sufficiently small relative to the shear viscosity. More generally, the velocity decays nonmonotonically, without necessarily passing through zero. The results are derived from the frequency-dependent friction coefficient, and hold for general boundary condition on the surface of the sphere.

Combining molecular dynamics with Lattice Boltzmann: A hybrid method for the simulation of (charged) colloidal systems

We present a hybrid method for the simulation of colloidal systems that combines molecular dynamics (MD) with the Lattice Boltzmann (LB) scheme. The LB method is used as a model for the solvent in order to take into account the hydrodynamic mass and momentum transport through the solvent. The colloidal particles are propagated via MD and they are coupled to the LB fluid by viscous forces. With respect to the LB fluid, the colloids are represented by uniformly distributed points on a sphere. Each such point [with a velocity V(r) at any off-lattice position r] is interacting with the neighboring eight LB nodes by a frictional force F = xi0(V(r)-u(r)), with xi0 being a friction coefficient and u(r) being the velocity of the fluid at the position r. Thermal fluctuations are introduced in the framework of fluctuating hydrodynamics. This coupling scheme has been proposed recently for polymer systems by Ahlrichs and Dunweg [J. Chem. Phys. 111, 8225 (1999)]. We investigate several properties of a single colloidal particle in a LB fluid, namely, the effective Stokes friction and long-time tails in the autocorrelation functions for the translational and rotational velocity. Moreover, a charged colloidal system is considered consisting of a macroion, counterions, and coions that are coupled to a LB fluid. We study the behavior of the ions in a constant electric field. In particular, an estimate of the effective charge of the macroion is yielded from the number of counterions that move with the macroion in the direction of the electric field.

Long-time behavior of the velocity autocorrelation function for moderately dense, soft-repulsive, and Lennard-Jones fluids

The long-time behavior of the velocity autocorrelation function (VAF), for hard disk and sphere systems, has been extensively explored. Its behavior for systems interacting via a soft repulsive or attractive potential is less well known. We explore the conditions under which the nonexponential, long-time tail in the velocity autocorrelation function of a tagged atom, in soft-repulsive sphere (Weeks-Chandler-Andersen) and Lennard-Jones atomic fluids, may be readily observed by the molecular dynamics method. The effect of changing the system size, the fluid density, the form of the interatomic force and the mass of the tagged atoms are investigated. We were able to observe this long-time tail only for systems of moderate density. At low density the effect, if it exists, is at longer times than we can currently simulate owing to limitations of system size and at higher densities these tails were not observed possibly due to other effects dominating the behavior of the VAF and masking this behavior. Under the physical conditions that are simulated here attractive forces have very little effect on the behavior of the VAF. However, as the mass of the tagged particles is increased the time at which the long-time tail commences is lengthened and its magnitude is significantly increased. This later effect suggests that by increasing the mass of the tagged particles one may be able to study more readily the behavior, nature and physical origin of long-time behavior of the VAF both by computational and by experimental techniques.

Long-time tails in the solid-body motion of a sphere immersed in a suspension

Long-time tails in the translational and rotational motion of a sphere immersed in a suspension of spherical particles are discussed on the basis of the linear, time-dependent Stokes equations of hydrodynamics. It is argued that the coefficient of the t(-3/2) long-time tail of translational motion depends only on the effective mass density and shear viscosity of the suspension. A similar expression holds for the coefficient of the t(-5/2) long-time tail of rotational motion. In particular, the long-time tails are independent of the sphere radius, and therefore the expressions hold also for a particle of the suspension. On account of the fluctuation-dissipation theorem the long-time tails of the velocity autocorrelation function and the angular velocity autocorrelation function of interacting Brownian particles are also given by these expressions.