1
|
Mollenkopf P, Prascevic D, Bayerl TM, Käs JA, Schnauß J. Heavy water induces bundling in entangled actin networks. RSC Adv 2023; 13:24795-24800. [PMID: 37601592 PMCID: PMC10437092 DOI: 10.1039/d3ra03917j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2023] [Accepted: 07/26/2023] [Indexed: 08/22/2023] Open
Abstract
Heavy water is known to affect many different biological systems, with the most striking effects observed at the cellular level. Many dynamic processes, such as migration or invasion, but also central processes of cell proliferation are measurably inhibited by the presence of deuterium oxide (D2O). Furthermore, individual cell deformabilities are significantly decreased upon D2O treatment. In order to understand the origin of these effects, we studied entangled filamentous actin networks, a commonly used model system for the cytoskeleton, which is considered a central functional element for dynamic cellular processes. Using bulk shear rheology to extract rheological signatures of reconstituted actin networks at varying concentrations of D2O, we found a non-monotonic behavior, which is explainable by a drastic change in the actin network architecture. Applying light scattering and fluorescence microscopy, we were able to demonstrate that the presence of deuterium oxide induces bundling in reconstituted entangled networks of filamentous actin. This constitutes an entirely novel and previously undescribed actin bundling mechanism.
Collapse
Affiliation(s)
- Paul Mollenkopf
- Department of Physiology, University of Pennsylvania Philadelphia PA 19104 USA
| | - Dusan Prascevic
- Peter-Debye Institute for Soft Matter Physics, Leipzig University 04103 Leipzig Germany
| | - Thomas M Bayerl
- Inventages 16 Northfields Prospect Business Centre, Putney Bridge Rd London SW181PE UK
| | - Josef A Käs
- Peter-Debye Institute for Soft Matter Physics, Leipzig University 04103 Leipzig Germany
| | - Jörg Schnauß
- Peter-Debye Institute for Soft Matter Physics, Leipzig University 04103 Leipzig Germany
- Fraunhofer Institute for Cell Therapy and Immunology 04103 Leipzig Germany
- Unconventional Computing Lab, Department of Computer Science and Creative Technologies, University of the West of England Bristol BS16 1QY UK
| |
Collapse
|
2
|
van Dalen M, Karperien M, Claessens MM, Post JN. Choice of Protein, Not Its Amyloid-Fold, Determines the Success of Amyloid-Based Scaffolds for Cartilage Tissue Regeneration. ACS OMEGA 2023; 8:24198-24209. [PMID: 37457450 PMCID: PMC10339334 DOI: 10.1021/acsomega.3c00151] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/09/2023] [Accepted: 05/18/2023] [Indexed: 07/18/2023]
Abstract
The formation of fibrocartilage during articular cartilage regeneration remains a clinical problem affecting adequate restoration of articular cartilage in joints. To stimulate chondrocytes to form articular cartilage, we investigated the use of amyloid fibril-based scaffolds. The proteins α-synuclein, β-lactoglobulin, and lysozyme were induced to self-assemble into amyloid fibrils and, during dialysis, formed micrometer scale amyloid networks that resemble the cartilage extracellular matrix. Our results show that lysozyme amyloid micronetworks supported chondrocyte viability and extracellular matrix deposition, while α-synuclein and β-lactoglobulin maintained cell viability. With this study, we not only confirm the possible use of amyloid materials for tissue regeneration but also demonstrate that the choice of protein, rather than its amyloid-fold per se, affects the cellular response and tissue formation.
Collapse
Affiliation(s)
- Maurice
C.E. van Dalen
- Developmental
BioEngineering, TechMed Centre, University
of Twente, Enschede, Overijssel 7500 AE, The Netherlands
- Nanobiophysics,
Mesa+, University of Twente, Enschede 7500AE, The Netherlands
| | - Marcel Karperien
- Developmental
BioEngineering, TechMed Centre, University
of Twente, Enschede, Overijssel 7500 AE, The Netherlands
| | | | - Janine N. Post
- Developmental
BioEngineering, TechMed Centre, University
of Twente, Enschede, Overijssel 7500 AE, The Netherlands
| |
Collapse
|
3
|
Scelsi A, Bochicchio B, Smith AM, Laezza A, Saiani A, Pepe A. Hydrogels from the Assembly of SAA/Elastin-Inspired Peptides Reveal Non-Canonical Nanotopologies. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27227901. [PMID: 36432002 PMCID: PMC9698559 DOI: 10.3390/molecules27227901] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/03/2022] [Revised: 10/31/2022] [Accepted: 11/10/2022] [Indexed: 11/17/2022]
Abstract
Peptide-based hydrogels are of great interest in the biomedical field according to their biocompatibility, simple structure and tunable properties via sequence modification. In recent years, multicomponent assembly of peptides have expanded the possibilities to produce more versatile hydrogels, by blending gelating peptides with different type of peptides to add new features. In the present study, the assembly of gelating P5 peptide SFFSF blended with P21 peptide, SFFSFGVPGVGVPGVGSFFSF, an elastin-inspired peptides or, alternatively, with FF dipeptide, was investigated by oscillatory rheology and different microscopy techniques in order to shed light on the nanotopologies formed by the self-assembled peptide mixtures. Our data show that, depending on the added peptides, cooperative or disruptive assembly can be observed giving rise to distinct nanotopologies to which correspond different mechanical properties that could be exploited to fabricate materials with desired properties.
Collapse
Affiliation(s)
- Alessandra Scelsi
- Laboratory of Bioinspired Materials (LABIM), Department of Science, University of Basilicata, 85100 Potenza, Italy
| | - Brigida Bochicchio
- Laboratory of Bioinspired Materials (LABIM), Department of Science, University of Basilicata, 85100 Potenza, Italy
| | - Andrew M. Smith
- Department of Materials, Manchester Institute of Biotechnology, Faculty of Science and Engineering, The University of Manchester, Manchester M13 9PL, UK
| | - Antonio Laezza
- Laboratory of Bioinspired Materials (LABIM), Department of Science, University of Basilicata, 85100 Potenza, Italy
| | - Alberto Saiani
- Department of Materials, Manchester Institute of Biotechnology, Faculty of Science and Engineering, The University of Manchester, Manchester M13 9PL, UK
| | - Antonietta Pepe
- Laboratory of Bioinspired Materials (LABIM), Department of Science, University of Basilicata, 85100 Potenza, Italy
- Correspondence: ; Tel.: +39-09-7120-5486
| |
Collapse
|
4
|
Dubackic M, Idini I, Lattanzi V, Liu Y, Martel A, Terry A, Haertlein M, Devos JM, Jackson A, Sparr E, Linse S, Olsson U. On the Cluster Formation of α-Synuclein Fibrils. Front Mol Biosci 2021; 8:768004. [PMID: 34738016 PMCID: PMC8560691 DOI: 10.3389/fmolb.2021.768004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2021] [Accepted: 09/30/2021] [Indexed: 12/05/2022] Open
Abstract
The dense accumulation of α-Synuclein fibrils in neurons is considered to be strongly associated with Parkinson’s disease. These intracellular inclusions, called Lewy bodies, also contain significant amounts of lipids. To better understand such accumulations, it should be important to study α-Synuclein fibril formation under conditions where the fibrils lump together, mimicking what is observed in Lewy bodies. In the present study, we have therefore investigated the overall structural arrangements of α-synuclein fibrils, formed under mildly acidic conditions, pH = 5.5, in pure buffer or in the presence of various model membrane systems, by means of small-angle neutron scattering (SANS). At this pH, α-synuclein fibrils are colloidally unstable and aggregate further into dense clusters. SANS intensities show a power law dependence on the scattering vector, q, indicating that the clusters can be described as mass fractal aggregates. The experimentally observed fractal dimension was d = 2.6 ± 0.3. We further show that this fractal dimension can be reproduced using a simple model of rigid-rod clusters. The effect of dominatingly attractive fibril-fibril interactions is discussed within the context of fibril clustering in Lewy body formation.
Collapse
Affiliation(s)
- Marija Dubackic
- Division of Physical Chemistry, Department of Chemistry, Lund University, Lund, Sweden
| | - Ilaria Idini
- Division of Physical Chemistry, Department of Chemistry, Lund University, Lund, Sweden
| | - Veronica Lattanzi
- Division of Physical Chemistry, Department of Chemistry, Lund University, Lund, Sweden.,Division of Biochemistry and Structural Biology, Department of Chemistry, Lund University, Lund, Sweden
| | - Yun Liu
- Center for Neutron Research, National Institute of Standards and Technology, Gaithersburg, MD, United States.,Chemical and Biomolecular Engineering Department, University of Delaware, Newark, DE, United States
| | | | - Ann Terry
- ISIS Neutron and Muon Source, Harwell Oxford, Didcot, United Kingdom.,Max IV Laboratory, Lund University, Lund, Sweden
| | | | | | - Andrew Jackson
- Division of Physical Chemistry, Department of Chemistry, Lund University, Lund, Sweden.,European Spallation Source, Lund, Sweden
| | - Emma Sparr
- Division of Biochemistry and Structural Biology, Department of Chemistry, Lund University, Lund, Sweden
| | - Sara Linse
- Division of Biochemistry and Structural Biology, Department of Chemistry, Lund University, Lund, Sweden
| | - Ulf Olsson
- Division of Physical Chemistry, Department of Chemistry, Lund University, Lund, Sweden
| |
Collapse
|
5
|
Adam JA, Middlestead HR, Debono NE, Hirsa AH. Effects of Shear Rate and Protein Concentration on Amyloidogenesis via Interfacial Shear. J Phys Chem B 2021; 125:10355-10363. [PMID: 34478304 DOI: 10.1021/acs.jpcb.1c05171] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The influence of hydrodynamics on protein fibrillization kinetics is relevant to biophysics, biochemical reactors, medicine, and disease. This investigation focused on the effects of interfacial shear on the fibrillization kinetics of insulin. Human insulin served as a model protein for studying shear-induced fibrillization with relevance to amyloid diseases such as Alzheimer's, Parkinson's, prions, and type 2 diabetes. Insulin solutions at different protein concentrations were subjected to shear flows with prescribed interfacial angular velocities using a knife-edge (surface) viscometer (KEV) operating in a laminar axisymmetric flow regime where inertia is significant. Fibrillization kinetics were quantified using intrinsic fibrillization rate and times (onset, half, and end) determined through spectroscopic measurement of monomer extinction curves and fitting to a sigmoidal function. Additionally, the occurrence of gelation was determined through macroscopic imaging and transient fibril microstructure was captured using fluorescence microscopy. The results showed that increasing interfacial shear rate produced a monotonic increase in intrinsic fibrillization rate and a monotonic decrease in fibrillization time. Protein concentration did not significantly impact the intrinsic fibrillization rate or times; however, a minimum fibril concentration for gelation was found. Protein microstructure showed increasing aggregation and plaque/cluster formation with time.
Collapse
Affiliation(s)
| | - Hannah R Middlestead
- Chemical Engineering, University of Colorado Boulder, Boulder, Colorado 80309-0584, United States
| | | | | |
Collapse
|
6
|
van Dalen ME, Vaneyck J, Semerdzhiev SA, Karperien M, Post JN, Claessens MMAE. Protein Adsorption Enhances Energy Dissipation in Networks of Lysozyme Amyloid Fibrils. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2021; 37:7349-7355. [PMID: 34097425 PMCID: PMC8223478 DOI: 10.1021/acs.langmuir.1c00657] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
Hydrogels of amyloid fibrils are a versatile biomaterial for tissue engineering and other biomedical applications. Their suitability for these applications has been partly ascribed to their excellent and potentially engineerable rheological properties. However, while in biomedical applications the gels have to function in compositionally complex physiological solutions, their rheological behavior is typically only characterized in simple buffers. Here we show that the viscoelastic response of networks of amyloid fibrils of the protein lysozyme in biologically relevant solutions substantially differs from the response in simple buffers. We observe enhanced energy dissipation in both cell culture medium and synovial fluid. We attribute this energy dissipation to interactions of the amyloid fibrils with other molecules in these solutions and especially to the adsorption of the abundantly present protein serum albumin. This finding provides the basis for a better understanding of the performance of amyloid hydrogels in biomedical applications.
Collapse
Affiliation(s)
- Maurice
C. E. van Dalen
- Nanobiophysics,
Faculty of Science and Technology, Mesa+ Institute for Nanotechnology, University of Twente, Enschede, 7500 AE, The Netherlands
- Developmental
BioEngineering, Faculty of Science and Engineering, TechMed Centre, University of Twente, Enschede, 7500 AE, The Netherlands
| | - Jonathan Vaneyck
- Nanobiophysics,
Faculty of Science and Technology, Mesa+ Institute for Nanotechnology, University of Twente, Enschede, 7500 AE, The Netherlands
| | - Slav A. Semerdzhiev
- Nanobiophysics,
Faculty of Science and Technology, Mesa+ Institute for Nanotechnology, University of Twente, Enschede, 7500 AE, The Netherlands
| | - Marcel Karperien
- Developmental
BioEngineering, Faculty of Science and Engineering, TechMed Centre, University of Twente, Enschede, 7500 AE, The Netherlands
| | - Janine N. Post
- Developmental
BioEngineering, Faculty of Science and Engineering, TechMed Centre, University of Twente, Enschede, 7500 AE, The Netherlands
| | - Mireille M. A. E. Claessens
- Nanobiophysics,
Faculty of Science and Technology, Mesa+ Institute for Nanotechnology, University of Twente, Enschede, 7500 AE, The Netherlands
- E-mail:
| |
Collapse
|
7
|
Valette N, Renou J, Boutilliat A, Fernández-González AJ, Gautier V, Silar P, Guyeux C, Charr JC, Cuenot S, Rose C, Gelhaye E, Morel-Rouhier M. OSIP1 is a self-assembling DUF3129 protein required to protect fungal cells from toxins and stressors. Environ Microbiol 2021; 23:1594-1607. [PMID: 33393164 DOI: 10.1111/1462-2920.15381] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2020] [Accepted: 12/28/2020] [Indexed: 11/28/2022]
Abstract
Secreted proteins are key players in fungal physiology and cell protection against external stressing agents and antifungals. Oak stress-induced protein 1 (OSIP1) is a fungal-specific protein with unknown function. By using Podospora anserina and Phanerochaete chrysosporium as models, we combined both in vivo functional approaches and biophysical characterization of OSIP1 recombinant protein. The P. anserina OSIP1Δ mutant showed an increased sensitivity to the antifungal caspofungin compared to the wild type. This correlated with the production of a weakened extracellular exopolysaccharide/protein matrix (ECM). Since the recombinant OSIP1 from P. chrysosporium self-assembled as fibers and was capable of gelation, it is likely that OSIP1 is linked to ECM formation that acts as a physical barrier preventing drug toxicity. Moreover, compared to the wild type, the OSIP1Δ mutant was more sensitive to oak extractives including chaotropic phenols and benzenes. It exhibited a strongly modified secretome pattern and an increased production of proteins associated to the cell-wall integrity signalling pathway, when grown on oak sawdust. This demonstrates that OSIP1 has also an important role in fungal resistance to extractive-induced stress.
Collapse
Affiliation(s)
- Nicolas Valette
- Université de Lorraine, INRAE, Interactions Arbres/Micro-organismes (IAM), UMR 1136, Nancy, 54000, France
| | - Julien Renou
- Université de Lorraine, INRAE, Interactions Arbres/Micro-organismes (IAM), UMR 1136, Nancy, 54000, France
| | - Alexis Boutilliat
- Université de Lorraine, INRAE, Interactions Arbres/Micro-organismes (IAM), UMR 1136, Nancy, 54000, France
| | | | - Valérie Gautier
- Université Paris Diderot, Sorbonne Paris Cité, Laboratoire Interdisciplinaire des Energies de Demain (LIED), Paris, 75205, France
| | - Philippe Silar
- Université Paris Diderot, Sorbonne Paris Cité, Laboratoire Interdisciplinaire des Energies de Demain (LIED), Paris, 75205, France
| | - Christophe Guyeux
- Computer Science Department, FEMTO-ST Institute, UMR 6174 CNRS, Université de Bourgogne Franche-Comté, 16 route de Gray, Besançon, 25030, France
| | - Jean-Claude Charr
- Computer Science Department, FEMTO-ST Institute, UMR 6174 CNRS, Université de Bourgogne Franche-Comté, 16 route de Gray, Besançon, 25030, France
| | - Stéphane Cuenot
- Institut des Matériaux Jean Rouxel, Université de Nantes, 2 rue de la Houssinière, Nantes Cedex 3, 44322, France
| | - Christophe Rose
- Université de Lorraine, AgroParisTech, INRAE, UMR Silva, Nancy, 54000, France
| | - Eric Gelhaye
- Université de Lorraine, INRAE, Interactions Arbres/Micro-organismes (IAM), UMR 1136, Nancy, 54000, France
| | - Mélanie Morel-Rouhier
- Université de Lorraine, INRAE, Interactions Arbres/Micro-organismes (IAM), UMR 1136, Nancy, 54000, France
| |
Collapse
|
8
|
Rüter A, Kuczera S, Gentile L, Olsson U. Arrested dynamics in a model peptide hydrogel system. SOFT MATTER 2020; 16:2642-2651. [PMID: 32119019 DOI: 10.1039/c9sm02244a] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
We report here on a peptide hydrogel system, which in contrast to most other such systems, is made up of relatively short fibrillar aggregates, discussing resemblance with colloidal rods. The synthetic model peptides A8K and A10K, where A denotes alanine and K lysine, self-assemble in aqueous solutions into ribbon-like aggregates having an average length 〈L〉 on the order of 100 nm and with a diameter d≈ 6 nm. The aggregates can be seen as weakly charged rigid rods and they undergo an isotropic to nematic phase transition at higher concentrations. Translational motion perpendicular to the rod axis gets strongly hindered when the concentration is increased above the overlap concentration. Similarly, the rotational motion is hindered, leading to very long stress relaxation times. The peptide self-assembly is driven by hydrophobic interactions and due to a net peptide charge the system is colloidally stable. However, at the same time short range, presumably hydrophobic, attractive interactions appear to affect the rheology of the system. Upon screening the long range electrostatic repulsion, with the addition of salt, the hydrophobic attraction becomes more dominant and we observe a transition from a repulsive glassy state to an attractive gel-state of the rod-like peptide aggregates.
Collapse
Affiliation(s)
- Axel Rüter
- Division of Physical Chemistry, Lund University, SE-22100 Lund, Sweden.
| | | | | | | |
Collapse
|
9
|
Wei Z, Huang Q. Impact of covalent or non-covalent bound epigallocatechin-3-gallate (EGCG) on assembly, physicochemical characteristics and digestion of ovotransferrin fibrils. Food Hydrocoll 2020. [DOI: 10.1016/j.foodhyd.2019.105314] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
|
10
|
Pogostin BH, Linse S, Olsson U. Fibril Charge Affects α-Synuclein Hydrogel Rheological Properties. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2019; 35:16536-16544. [PMID: 31724872 DOI: 10.1021/acs.langmuir.9b02516] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
In this paper, we have investigated the interactions between α-synuclein fibrils at different pH values and how this relates to hydrogel formation and gel properties. Using a combination of rheology, small-angle X-ray scattering, Raman spectroscopy, and cryo-transmission electron microscopy (cryo-TEM) experiments, we have been able to investigate the relationship between protein net charge, fibril-fibril interactions, and hydrogel properties, and have explored the potential for α-synuclein to form hydrogels at various conditions. We have found that α-synuclein can form hydrogels at lower concentrations (50-300 μM) and over a wider pH range (6.0-7.5) than previously reported. Over this pH range and at 300 μM, the fibril network is electrostatically stabilized. Decreasing the pH to 5.5 results in the precipitation of fibrils. A maximum in gel stiffness was observed at pH 6.5 (∼1300 Pa), which indicates that significant attractive interactions operate at this pH and cause an increase in the density of hydrophobic contacts between the otherwise negatively charged fibrils. We conclude that fibril-fibril interactions under these conditions involve both long-range electrostatic repulsion and a short-range hydrophobic attractive (sticky) component. These results may provide a basis for potential applications and add to the understanding of amyloids.
Collapse
Affiliation(s)
- Brett H Pogostin
- Department of Bioengineering , Rice University , MS-142, 6100 Main Street , Houston , Texas 77005 , United States
| | | | | |
Collapse
|
11
|
Wei Z, Huang Q. Modulation of Formation, Physicochemical Properties, and Digestion of Ovotransferrin Nanofibrils with Covalent or Non-Covalent Bound Gallic Acid. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2019; 67:9907-9915. [PMID: 31436102 DOI: 10.1021/acs.jafc.9b02630] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
The impact of covalent or non-covalent bound gallic acid (GA) on the formation, physicochemical properties, and digestion of ovotransferrin (OTF) nanofibrils was comprehensively studied. Thioflavin T fluorescence results revealed that bound GA could inhibit OTF nanofibrillation and that the fibril-inhibitory activity of bound GA was dose dependent. Covalent bound GA exerted stronger inhibition on OTF nanofibrillation than an equal amount of non-covalent bound GA. Atomic force microscopy revealed that covalent bound GA shortened OTF nanofibrils significantly, while non-covalent bound GA did not change the contour length of OTF fibrils remarkably. Bound GA altered diameter of OTF nanofibrils. Both covalent and non-covalent bound GA could alter the zeta potential, surface hydrophobicity, and rheological properties of OTF nanofibrils. Bound GA endowed OTF nanofibrils with a strong antioxidant activity. In vitro gastrointestinal digestion results showed that covalent bound GA elevated the fibril digestion rate better than non-covalent bound GA. Polyphenol binding provided a new approach to modulating the physicochemical properties of protein nanofibrils.
Collapse
Affiliation(s)
- Zihao Wei
- Department of Food Science , Rutgers University , 65 Dudley Road , New Brunswick , New Jersey 08901 , United States
| | - Qingrong Huang
- Department of Food Science , Rutgers University , 65 Dudley Road , New Brunswick , New Jersey 08901 , United States
| |
Collapse
|
12
|
Alam P, Bousset L, Melki R, Otzen DE. α-synuclein oligomers and fibrils: a spectrum of species, a spectrum of toxicities. J Neurochem 2019; 150:522-534. [PMID: 31254394 DOI: 10.1111/jnc.14808] [Citation(s) in RCA: 176] [Impact Index Per Article: 35.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2019] [Revised: 06/05/2019] [Accepted: 06/21/2019] [Indexed: 12/14/2022]
Abstract
This review article provides an overview of the different species that α-synuclein aggregates can populate. It also attempts to reconcile conflicting views regarding the cytotoxic roles of oligomers versus fibrils. α-synuclein, while highly dynamic in the monomeric state, can access a large number of different assembly states. Depending on assembly conditions, these states can interconvert over different timescales. The fibrillar state is the most thermodynamically favored due to the many stabilizing interactions formed between each monomeric unit, but different fibrillar types form at different rates. The end distribution is likely to reflect kinetic partitioning as much as thermodynamic equilibra. In addition, metastable oligomeric species, some of which are on-pathway and others off-pathway, can be populated for remarkably long periods of time. Chemical modifications (phosphorylation, oxidation, covalent links to ligands, etc.) perturb these physical interconversions and invariably destabilize the fibrillar state, leading to small prefibrillar assemblies which can coalesce into amorphous states. Both oligomeric and fibrillar species have been shown to be cytotoxic although firm conclusions require very careful evaluation of particle concentrations and is complicated by the great variety and heterogeneity of different experimentally observed states. The mechanistic relationship between oligomers and fibrils remains to be clarified, both in terms of assembly of oligomers into fibrils and potential dissolution of fibrils into oligomers. While oligomers are possibly implicated in the collapse of neuronal homeostasis, the fibrillar state(s) appears to be the most efficient at propagating itself both in vitro and in vivo, pointing to critical roles for multiple different aggregate species in the progression of Parkinson's disease (https://onlinelibrary.wiley.com/page/journal/14714159/homepage/virtual_issues.htm). This article is part of the Special Issue "Synuclein".
Collapse
Affiliation(s)
- Parvez Alam
- iNANO and Department of Molecular Biology and Genetics, Aarhus University, Aarhus C, Denmark
| | - Luc Bousset
- Institute Francois Jacob (MIRCen), CEA and Laboratory of Neurodegenerative Diseases, CNRS, Fontenay-Aux-Roses cedex, France
| | - Ronald Melki
- Institute Francois Jacob (MIRCen), CEA and Laboratory of Neurodegenerative Diseases, CNRS, Fontenay-Aux-Roses cedex, France
| | - Daniel E Otzen
- iNANO and Department of Molecular Biology and Genetics, Aarhus University, Aarhus C, Denmark
| |
Collapse
|
13
|
Golde T, Glaser M, Tutmarc C, Elbalasy I, Huster C, Busteros G, Smith DM, Herrmann H, Käs JA, Schnauß J. The role of stickiness in the rheology of semiflexible polymers. SOFT MATTER 2019; 15:4865-4872. [PMID: 31161188 DOI: 10.1039/c9sm00433e] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Semiflexible polymers form central structures in biological material. Modelling approaches usually neglect influences of polymer-specific molecular features aiming to describe semiflexible polymers universally. Here, we investigate the influence of molecular details on networks assembled from filamentous actin, intermediate filaments, and synthetic DNA nanotubes. In contrast to prevalent theoretical assumptions, we find that bulk properties are affected by various inter-filament interactions. We present evidence that these interactions can be merged into a single parameter in the frame of the glassy wormlike chain model. The interpretation of this parameter as a polymer specific stickiness is consistent with observations from macro-rheological measurements and reptation behaviour. Our findings demonstrate that stickiness should generally not be ignored in semiflexible polymer models.
Collapse
Affiliation(s)
- Tom Golde
- Peter Debye Institute for Soft Matter Physics, University of Leipzig, 04103 Leipzig, Germany.
| | | | | | | | | | | | | | | | | | | |
Collapse
|