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Houston AJH, Mottram NJ. Spontaneous flows and quantum analogies in heterogeneous active nematic films. COMMUNICATIONS PHYSICS 2024; 7:375. [PMID: 39574428 PMCID: PMC11576538 DOI: 10.1038/s42005-024-01864-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/05/2024] [Accepted: 11/06/2024] [Indexed: 11/24/2024]
Abstract
Incorporating the inherent heterogeneity of living systems into models of active nematics is essential to provide a more realistic description of biological processes such as bacterial growth, cell dynamics and tissue development. Spontaneous flow of a confined active nematic is a fundamental feature of these systems, in which the role of heterogeneity has not yet been considered. We therefore determine the form of spontaneous flow transition for an active nematic film with heterogeneous activity, identifying a correspondence between the unstable director modes and solutions to Schrödinger's equation. We consider both activity gradients and steps between regions of distinct activity, finding that such variations can change the signature properties of the flow. The threshold activity required for the transition can be raised or lowered, the fluid flux can be reduced or reversed and interfaces in activity induce shear flows. In a biological context fluid flux influences the spread of nutrients while shear flows affect the behaviour of rheotactic microswimmers and can cause the deformation of biofilms. All the effects we identify are found to be strongly dependent on not simply the types of activity present in the film but also on how they are distributed.
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Affiliation(s)
| | - Nigel J. Mottram
- School of Mathematics and Statistics, University Place, Glasgow, G12 8QQ United Kingdom
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Neville L, Eggers J, Liverpool TB. Controlling wall-particle interactions with activity. SOFT MATTER 2024; 20:8395-8406. [PMID: 39390954 DOI: 10.1039/d4sm00634h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/12/2024]
Abstract
We theoretically determine the effective forces on hard disks near walls embedded inside active nematic liquid crystals. When the disks are sufficiently close to the wall and the flows are sufficiently slow, we can obtain exact expressions for the effective forces. We find these forces and the dynamics of disks near the wall depend both on the properties of the active nematic and on the anchoring conditions on the disks and the wall. Our results show that the presence of active stresses attract planar anchored disks to walls if the activity is extensile, and repel them if contractile. For normal anchored disks the reverse is true; they are attracted in contractile systems, and repelled in extensile ones. By choosing the activity and anchoring, these effects may be helpful in controlling the self assembly of active nematic colloids.
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Affiliation(s)
- Luke Neville
- School of Mathematics, University of Bristol, Fry Building, Bristol BS8 1UG, UK.
- The Isaac Newton Institute for Mathematical Sciences, Cambridge CB3 0EH, UK
| | - Jens Eggers
- School of Mathematics, University of Bristol, Fry Building, Bristol BS8 1UG, UK.
| | - Tanniemola B Liverpool
- School of Mathematics, University of Bristol, Fry Building, Bristol BS8 1UG, UK.
- The Isaac Newton Institute for Mathematical Sciences, Cambridge CB3 0EH, UK
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Vaidya JP, Shendruk TN, Thampi SP. Active nematics in corrugated channels. SOFT MATTER 2024; 20:8230-8245. [PMID: 39377100 DOI: 10.1039/d4sm00760c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/09/2024]
Abstract
Active nematic fluids exhibit complex dynamics in both bulk and in simple confining geometries. However, complex confining geometries could have substantial impact on active spontaneous flows. Using multiparticle collision dynamics simulations adapted for active nematic particles, we study the dynamic behaviour of an active nematic fluid confined in a corrugated channel. The transition from a quiescent state to a spontaneous flow state occurs from a weak swirling flow to a strong coherent flow due to the presence of curved-wall induced active flows. We show that the active nematic fluid flows in corrugated channels can be understood in two different ways: (i) as the result of an early or delayed flow transition when compared with that in a flat-walled channel of appropriate width and (ii) boundary-induced active flows in the corrugations providing an effective slip velocity to the coherent flows in the bulk. Thus, our work illustrates the crucial role of corrugations of the confining boundary in dictating the flow transition and flow states of active fluids.
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Affiliation(s)
- Jaideep P Vaidya
- Department of Chemical Engineering, Indian Institute of Technology Madras, Chennai 600036, India.
| | - Tyler N Shendruk
- School of Physics and Astronomy, The University of Edinburgh, Peter Guthrie Tait Road, Edinburgh EH9 3FD, UK
| | - Sumesh P Thampi
- Department of Chemical Engineering, Indian Institute of Technology Madras, Chennai 600036, India.
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Schimming CD, Reichhardt CJO, Reichhardt C. Active nematic ratchet in asymmetric obstacle arrays. Phys Rev E 2024; 109:064602. [PMID: 39021011 DOI: 10.1103/physreve.109.064602] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2024] [Accepted: 05/03/2024] [Indexed: 07/20/2024]
Abstract
We numerically investigate the effect of an asymmetric periodic obstacle array in a two-dimensional active nematic. We find that activity in conjunction with the asymmetry leads to a ratchet effect or unidirectional flow of the fluid along the asymmetry direction. The directional flow is still present even in the active turbulent phase when the gap between obstacles is sufficiently small. We demonstrate that the dynamics of the topological defects transition from flow mirroring to smectic-like as the gap between obstacles is made smaller, and explain this transition in terms of the pinning of negative winding number defects between obstacles. This also leads to a nonmonotonic ratchet effect magnitude as a function of obstacle size, so that there is an optimal obstacle size for ratcheting at fixed activity.
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Singh C, Chaudhuri A. Anomalous dynamics of a passive droplet in active turbulence. Nat Commun 2024; 15:3704. [PMID: 38697961 PMCID: PMC11066042 DOI: 10.1038/s41467-024-47727-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2023] [Accepted: 04/09/2024] [Indexed: 05/05/2024] Open
Abstract
Motion of a passive deformable object in an active environment serves as a representative of both in-vivo systems such as intracellular particle motion in Acanthamoeba castellanii, or in-vitro systems such as suspension of beads inside dense swarms of Escherichia coli. Theoretical modeling of such systems is challenging due to the requirement of well resolved hydrodynamics which can explore the spatiotemporal correlations around the suspended passive object in the active fluid. We address this critical lack of understanding using coupled hydrodynamic equations for nematic liquid crystals with finite active stress to model the active bath, and a suspended nematic droplet with zero activity. The droplet undergoes deformation fluctuations and its movement shows periods of "runs" and "stays". At relatively low interfacial tension, the droplet begins to break and mix with the outer active bath. We establish that the motion of the droplet is influenced by the interplay of spatial correlations of the flow and the size of the droplet. The mean square displacement shows a transition from ballistic to normal diffusion which depends on the droplet size. We discuss this transition in relation to spatiotemporal scales associated with velocity correlations of the active bath and the droplet.
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Affiliation(s)
- Chamkor Singh
- Department of Physics, Central University of Punjab, Bathinda, India.
| | - Abhishek Chaudhuri
- Department of Physical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, SAS Nagar, Mohali, Punjab, 140306, India.
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Großmann R, Bort LS, Moldenhawer T, Stange M, Panah SS, Metzler R, Beta C. Non-Gaussian Displacements in Active Transport on a Carpet of Motile Cells. PHYSICAL REVIEW LETTERS 2024; 132:088301. [PMID: 38457713 DOI: 10.1103/physrevlett.132.088301] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2023] [Revised: 01/10/2024] [Accepted: 01/24/2024] [Indexed: 03/10/2024]
Abstract
We study the dynamics of micron-sized particles on a layer of motile cells. This cell carpet acts as an active bath that propels passive tracer particles via direct mechanical contact. The resulting nonequilibrium transport shows a crossover from superdiffusive to normal-diffusive dynamics. The particle displacement distribution is distinctly non-Gaussian even at macroscopic timescales exceeding the measurement time. We obtain the distribution of diffusion coefficients from the experimental data and introduce a model for the displacement distribution that matches the experimentally observed non-Gaussian statistics. We argue why similar transport properties are expected for many composite active matter systems.
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Affiliation(s)
- Robert Großmann
- Institute of Physics and Astronomy, University of Potsdam, Potsdam 14476, Germany
| | - Lara S Bort
- Institute of Physics and Astronomy, University of Potsdam, Potsdam 14476, Germany
| | - Ted Moldenhawer
- Institute of Physics and Astronomy, University of Potsdam, Potsdam 14476, Germany
| | - Maike Stange
- Institute of Physics and Astronomy, University of Potsdam, Potsdam 14476, Germany
| | | | - Ralf Metzler
- Institute of Physics and Astronomy, University of Potsdam, Potsdam 14476, Germany
- Asia Pacific Center for Theoretical Physics, Pohang 37673, Republic of Korea
| | - Carsten Beta
- Institute of Physics and Astronomy, University of Potsdam, Potsdam 14476, Germany
- Nano Life Science Institute (WPI-NanoLSI), Kanazawa University, Kakuma-machi, Kanazawa 920-1192, Japan
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Mitchell KA, Sabbir MMH, Geumhan K, Smith SA, Klein B, Beller DA. Maximally mixing active nematics. Phys Rev E 2024; 109:014606. [PMID: 38366395 DOI: 10.1103/physreve.109.014606] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2023] [Accepted: 11/30/2023] [Indexed: 02/18/2024]
Abstract
Active nematics are an important new paradigm in soft condensed matter systems. They consist of rodlike components with an internal driving force pushing them out of equilibrium. The resulting fluid motion exhibits chaotic advection, in which a small patch of fluid is stretched exponentially in length. Using simulation, this paper shows that this system can exhibit stable periodic motion when confined to a sufficiently small square with periodic boundary conditions. Moreover, employing tools from braid theory, we show that this motion is maximally mixing, in that it optimizes the (dimensionless) "topological entropy"-the exponential stretching rate of a material line advected by the fluid. That is, this periodic motion of the defects, counterintuitively, produces more chaotic mixing than chaotic motion of the defects. We also explore the stability of the periodic state. Importantly, we show how to stabilize this orbit into a larger periodic tiling, a critical necessity for it to be seen in future experiments.
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Affiliation(s)
- Kevin A Mitchell
- Physics Department, University of California, Merced, California 95344, USA
| | | | - Kevin Geumhan
- Physics Department, University of California, Merced, California 95344, USA
| | - Spencer A Smith
- Physics Department, Mount Holyoke College, South Hadley, Massachusetts 01075, USA
| | - Brandon Klein
- Department of Physics and Astronomy, Johns Hopkins University, Baltimore, Maryland 21218, USA
| | - Daniel A Beller
- Department of Physics and Astronomy, Johns Hopkins University, Baltimore, Maryland 21218, USA
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