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Bury G, García-Huéscar M, Bhattacharya J, Ruiz MH. Cardiac afferent activity modulates early neural signature of error detection during skilled performance. Neuroimage 2019; 199:704-717. [DOI: 10.1016/j.neuroimage.2019.04.043] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2018] [Revised: 03/30/2019] [Accepted: 04/15/2019] [Indexed: 10/26/2022] Open
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Beim Graben P, Hutt A. Detecting event-related recurrences by symbolic analysis: applications to human language processing. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2015; 373:rsta.2014.0089. [PMID: 25548270 PMCID: PMC4281863 DOI: 10.1098/rsta.2014.0089] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
Quasi-stationarity is ubiquitous in complex dynamical systems. In brain dynamics, there is ample evidence that event-related potentials (ERPs) reflect such quasi-stationary states. In order to detect them from time series, several segmentation techniques have been proposed. In this study, we elaborate a recent approach for detecting quasi-stationary states as recurrence domains by means of recurrence analysis and subsequent symbolization methods. We address two pertinent problems of contemporary recurrence analysis: optimizing the size of recurrence neighbourhoods and identifying symbols from different realizations for sequence alignment. As possible solutions for these problems, we suggest a maximum entropy criterion and a Hausdorff clustering algorithm. The resulting recurrence domains for single-subject ERPs are obtained as partition cells reflecting quasi-stationary brain states.
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Affiliation(s)
- Peter Beim Graben
- Department of German Studies and Linguistics, Humboldt- Universität zu Berlin, Unter den Linden 6, 10099 Berlin, Germany Bernstein Center for Computational Neuroscience Berlin, 10115 Berlin, Germany
| | - Axel Hutt
- Team Neurosys, INRIA CR Nancy, 54602 Villers-les-Nancy Cedex, France
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Statistical Mechanics and Information-Theoretic Perspectives on Complexity in the Earth System. ENTROPY 2013. [DOI: 10.3390/e15114844] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Khorshidtalab A, Salami MJE, Hamedi M. Robust classification of motor imagery EEG signals using statistical time-domain features. Physiol Meas 2013; 34:1563-79. [PMID: 24152422 DOI: 10.1088/0967-3334/34/11/1563] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
The tradeoff between computational complexity and speed, in addition to growing demands for real-time BMI (brain-machine interface) systems, expose the necessity of applying methods with least possible complexity. Willison amplitude (WAMP) and slope sign change (SSC) are two promising time-domain features only if the right threshold value is defined for them. To overcome the drawback of going through trial and error for the determination of a suitable threshold value, modified WAMP and modified SSC are proposed in this paper. Besides, a comprehensive assessment of statistical time-domain features in which their effectiveness is evaluated with a support vector machine (SVM) is presented. To ensure the accuracy of the results obtained by the SVM, the performance of each feature is reassessed with supervised fuzzy C-means. The general assessment shows that every subject had at least one of his performances near or greater than 80%. The obtained results prove that for BMI applications, in which a few errors can be tolerated, these combinations of feature-classifier are suitable. Moreover, features that could perform satisfactorily were selected for feature combination. Combinations of the selected features are evaluated with the SVM, and they could significantly improve the results, in some cases, up to full accuracy.
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Affiliation(s)
- A Khorshidtalab
- Department of Mechatronics Engineering, International Islamic University Malaysia, Gombak, Malaysia
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Xu Y, Ma QD, Schmitt DT, Bernaola-Galván P, Ivanov PC. Effects of coarse-graining on the scaling behavior of long-range correlated and anti-correlated signals. PHYSICA A 2011; 390:4057-4072. [PMID: 25392599 PMCID: PMC4226277 DOI: 10.1016/j.physa.2011.05.015] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
We investigate how various coarse-graining (signal quantization) methods affect the scaling properties of long-range power-law correlated and anti-correlated signals, quantified by the detrended fluctuation analysis. Specifically, for coarse-graining in the magnitude of a signal, we consider (i) the Floor, (ii) the Symmetry and (iii) the Centro-Symmetry coarse-graining methods. We find that for anti-correlated signals coarse-graining in the magnitude leads to a crossover to random behavior at large scales, and that with increasing the width of the coarse-graining partition interval Δ, this crossover moves to intermediate and small scales. In contrast, the scaling of positively correlated signals is less affected by the coarse-graining, with no observable changes when Δ < 1, while for Δ > 1 a crossover appears at small scales and moves to intermediate and large scales with increasing Δ. For very rough coarse-graining (Δ > 3) based on the Floor and Symmetry methods, the position of the crossover stabilizes, in contrast to the Centro-Symmetry method where the crossover continuously moves across scales and leads to a random behavior at all scales; thus indicating a much stronger effect of the Centro-Symmetry compared to the Floor and the Symmetry method. For coarse-graining in time, where data points are averaged in non-overlapping time windows, we find that the scaling for both anti-correlated and positively correlated signals is practically preserved. The results of our simulations are useful for the correct interpretation of the correlation and scaling properties of symbolic sequences.
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Affiliation(s)
- Yinlin Xu
- Center for Polymer Studies and Department of Physics, Boston University, Boston, MA 02215, USA
- College of Physics Science and Technology, Nanjing Normal University, Nanjing 210097, China
| | - Qianli D.Y. Ma
- Harvard Medical School and Division of Sleep Medicine, Brigham & Women’s Hospital, Boston, MA 02215, USA
- College of Geography and Biological Information, Nanjing University of Posts and Telecommunications, Nanjing 210003, China
| | - Daniel T. Schmitt
- Center for Polymer Studies and Department of Physics, Boston University, Boston, MA 02215, USA
| | | | - Plamen Ch. Ivanov
- Center for Polymer Studies and Department of Physics, Boston University, Boston, MA 02215, USA
- Harvard Medical School and Division of Sleep Medicine, Brigham & Women’s Hospital, Boston, MA 02215, USA
- Departamento de Física Aplicada II, Universidad de Málaga, 29071 Málaga, Spain
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Ruiz MH, Jabusch HC, Altenmüller E. Detecting Wrong Notes in Advance: Neuronal Correlates of Error Monitoring in Pianists. Cereb Cortex 2009; 19:2625-39. [PMID: 19276327 DOI: 10.1093/cercor/bhp021] [Citation(s) in RCA: 70] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
Affiliation(s)
- María Herrojo Ruiz
- Institute of Music Physiology and Musicians' Medicine, Hanover University of Music and Drama, Hanover 30161, Germany
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beim Graben P, Drenhaus H, Brehm E, Rhode B, Saddy D, Frisch S. Enhancing dominant modes in nonstationary time series by means of the symbolic resonance analysis. CHAOS (WOODBURY, N.Y.) 2007; 17:043106. [PMID: 18163770 DOI: 10.1063/1.2795434] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
We present the symbolic resonance analysis (SRA) as a viable method for addressing the problem of enhancing a weakly dominant mode in a mixture of impulse responses obtained from a nonlinear dynamical system. We demonstrate this using results from a numerical simulation with Duffing oscillators in different domains of their parameter space, and by analyzing event-related brain potentials (ERPs) from a language processing experiment in German as a representative application. In this paradigm, the averaged ERPs exhibit an N400 followed by a sentence final negativity. Contemporary sentence processing models predict a late positivity (P600) as well. We show that the SRA is able to unveil the P600 evoked by the critical stimuli as a weakly dominant mode from the covering sentence final negativity.
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Affiliation(s)
- Peter beim Graben
- School of Psychology and Clinical Language Sciences, University of Reading, Reading RG6 6AH, United Kingdom.
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Assmann B, Thiel M, Romano MC, Niemitz C. Recurrence plot analyses suggest a novel reference system involved in newborn spontaneous movements. Behav Res Methods 2007; 38:400-6. [PMID: 17186749 DOI: 10.3758/bf03192793] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
The movements of newborns have been thoroughly studied in terms of reflexes, muscle synergies, leg coordination, and target-directed arm/hand movements. Since these approaches have concentrated mainly on separate accomplishments, there has remained a clear need for more integrated investigations. Here, we report an inquiry in which we explicitly concentrated on taking such a perspective and, additionally, were guided by the methodological concept of home base behavior, which Ilan Golani developed for studies of exploratory behavior in animals. Methods from nonlinear dynamics, such as symbolic dynamics and recurrence plot analyses of kinematic data received from audiovisual newborn recordings, yielded new insights into the spatial and temporal organization of limb movements. In the framework of home base behavior, our approach uncovered a novel reference system of spontaneous newborn movements.
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Affiliation(s)
- Birte Assmann
- Institute of Human Biology and Anthropology, Free University Berlin, Albrecht-Thaer-Weg 6, 14195 Berlin, Germany.
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Drenhaus H, Beim Graben P, Saddy D, Frisch S. Diagnosis and repair of negative polarity constructions in the light of symbolic resonance analysis. BRAIN AND LANGUAGE 2006; 96:255-68. [PMID: 15975647 DOI: 10.1016/j.bandl.2005.05.001] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2005] [Revised: 04/27/2005] [Accepted: 05/15/2005] [Indexed: 05/03/2023]
Abstract
In a post hoc analysis, we investigate differences in event-related potentials of two studies (Drenhaus et al., 2004, Drenhaus et al., to appear, Saddy et al., 2004a and Saddy et al., 2004b) by using the symbolic resonance analysis (Beim Graben & Kurths, 2003). The studies under discussion, examined the failure to license a negative polarity item (NPI) in German: Saddy et al. (2004a) reported an N400 component when the NPI was not accurately licensed by negation; Drenhaus et al., 2004 and Drenhaus et al., to appear considered additionally the influence of constituency of the licensor in NPI constructions. A biphasic N400-P600 response was found for the two induced violations (the lack of licensor and the inaccessibility of negation in a relative clause). The symbolic resonance analysis (SRA) revealed an effect in the P600 time window for the data in Saddy et al., which was not found by using the averaging technique. The SRA of the ERPs in Drenhaus et al., showed that the P600 components are distinguishable concerning the amplitude and latency. It was smaller and earlier in the condition where the licensor is inaccessible, compared to the condition without negation in the string. Our findings suggest that the failure in licensing NPIs is not exclusively related to semantic integration costs (N400). The elicited P600 components reflect differences in syntactic processing. Our results confirm and replicate the effects of the traditional voltage average analysis and show that the SRA is a useful tool to reveal and pull apart ERP differences which are not evident using the traditional voltage average analysis.
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beim Graben P, Frisch S, Fink A, Saddy D, Kurths J. Topographic voltage and coherence mapping of brain potentials by means of the symbolic resonance analysis. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2005; 72:051916. [PMID: 16383654 DOI: 10.1103/physreve.72.051916] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2005] [Indexed: 05/05/2023]
Abstract
We apply the recently developed symbolic resonance analysis to electroencephalographic measurements of event-related brain potentials (ERPs) in a language processing experiment by using a three-symbol static encoding with varying thresholds for analyzing the ERP epochs, followed by a spin-flip transformation as a nonlinear filter. We compute an estimator of the signal-to-noise ratio (SNR) for the symbolic dynamics measuring the coherence of threshold-crossing events. Hence, we utilize the inherent noise of the EEG for sweeping the underlying ERP components beyond the encoding thresholds. Plotting the SNR computed within the time window of a particular ERP component (the N400) against the encoding thresholds, we find different resonance curves for the experimental conditions. The maximal differences of the SNR lead to the estimation of optimal encoding thresholds. We show that topographic brain maps of the optimal threshold voltages and of their associated coherence differences are able to dissociate the underlying physiological processes, while corresponding maps gained from the customary voltage averaging technique are unable to do so.
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Frisch S, Beim Graben P. Finding needles in haystacks: Symbolic resonance analysis of event-related potentials unveils different processing demands. ACTA ACUST UNITED AC 2005; 24:476-91. [PMID: 16099360 DOI: 10.1016/j.cogbrainres.2005.03.004] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2004] [Revised: 12/28/2004] [Accepted: 03/01/2005] [Indexed: 11/25/2022]
Abstract
Previous ERP studies have found an N400-P600 pattern in sentences in which the number of arguments does not match the number of arguments that the verb can take. In the present study, we elaborate on this question by investigating whether the case of the mismatching object argument in German (accusative/direct object versus dative/indirect object) affects processing differently. In general, both types of mismatches elicited a biphasic N400-P600 response in the ERP. However, traditional voltage average analysis was unable to reveal differences between the two mismatching conditions, that is, between a mismatching accusative versus dative. Therefore, we employed a recently developed method on ERP data analysis, the symbolic resonance analysis (SRA), where EEG epochs are symbolically encoded in sequences of three symbols depending on a given parameter, the encoding threshold. We found a larger proportion of threshold crossing events with negative polarity in the N400 time window for a mismatching dative argument compared to a mismatching accusative argument. By contrast, the proportion of threshold crossing events with positive polarity was smaller for dative in the P600 time window. We argue that this difference is due to the phenomenon of "free dative" in German. This result also shows that the SRA provides a useful tool for revealing ERP differences that cannot be discovered using the traditional voltage average analysis.
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Affiliation(s)
- Stefan Frisch
- Max-Planck-Institute of Human Cognitive and Brain Sciences, Leipzig, Germany.
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