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For: Campbell L, Rehr JJ, Schenter GK, McCarthy MI, Dixon D. XAFS Debye-Waller factors in aqueous Cr+3 from molecular dynamics. J Synchrotron Radiat 1999;6:310-312. [PMID: 15263290 DOI: 10.1107/s0909049598018202] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/1998] [Accepted: 12/21/1998] [Indexed: 05/24/2023]
Number Cited by Other Article(s)
1
Kalintsev A, Guan Q, Brugger J, Migdisov A, Etschmann B, Ram R, Liu W, Mei Y, Testemale D, Xu H. Nature and coordination geometry of geologically relevant aqueous Uranium(VI) complexes up to 400 ºC: A review and new data. JOURNAL OF HAZARDOUS MATERIALS 2023;452:131309. [PMID: 37018892 DOI: 10.1016/j.jhazmat.2023.131309] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/22/2023] [Revised: 03/23/2023] [Accepted: 03/26/2023] [Indexed: 06/19/2023]
2
Pappalardo RR, Caralampio DZ, Martínez JM, Sánchez Marcos E. Hydration of Heavy Alkaline-Earth Cations Studied by Molecular Dynamics Simulations and X-ray Absorption Spectroscopy. Inorg Chem 2021;60:13578-13587. [PMID: 34387993 PMCID: PMC8512670 DOI: 10.1021/acs.inorgchem.1c01888] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
3
Pérez-Conesa S, Martínez JM, Pappalardo RR, Marcos ES. Combining EXAFS and Computer Simulations to Refine the Structural Description of Actinyls in Water. Molecules 2020;25:E5250. [PMID: 33187172 PMCID: PMC7697702 DOI: 10.3390/molecules25225250] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2020] [Revised: 11/05/2020] [Accepted: 11/08/2020] [Indexed: 11/16/2022]  Open
4
Caralampio DZ, Reeves B, Beccia MR, Martínez JM, Pappalardo RR, den Auwer C, Sánchez Marcos E. Revisiting the cobalt(II) hydration from molecular dynamics and X-ray absorption spectroscopy. Mol Phys 2019. [DOI: 10.1080/00268976.2019.1650209] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
5
Zhang N, Yi H, Zeng D, Zhao Z, Wang W, Costanzo F. Structure evolution of mononuclear tungsten and molybdenum species in the protonation process: Insight from FPMD and DFT calculations. Chem Phys 2018. [DOI: 10.1016/j.chemphys.2018.01.009] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
6
Ayala R, Martínez JM, R Pappalardo R, Refson K, Sánchez Marcos E. Effect of Basicity on the Hydrolysis of the Bi(III) Aqua Ion in Solution: An Ab Initio Molecular Dynamics Study. J Phys Chem A 2018;122:1905-1915. [PMID: 29376356 DOI: 10.1021/acs.jpca.7b12402] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
7
Caralampio DZ, Martínez JM, Pappalardo RR, Marcos ES. The hydration structure of the heavy-alkalines Rb+ and Cs+ through molecular dynamics and X-ray absorption spectroscopy: surface clusters and eccentricity. Phys Chem Chem Phys 2017;19:28993-29004. [DOI: 10.1039/c7cp05346k] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
8
Galbis E, Hernández-Cobos J, Pappalardo RR, Marcos ES. Collecting high-order interactions in an effective pairwise intermolecular potential using the hydrated ion concept: The hydration of Cf3+. J Chem Phys 2014;140:214104. [DOI: 10.1063/1.4879549] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]  Open
9
Provost K, Beret EC, Bouvet Muller D, Michalowicz A, Sánchez Marcos E. EXAFS Debye-Waller factors issued from Car-Parrinello molecular dynamics: Application to the fit of oxaliplatin and derivatives. J Chem Phys 2013;138:084303. [DOI: 10.1063/1.4790516] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
10
Bogatko S, Cauët E, Bylaska E, Schenter G, Fulton J, Weare J. The aqueous Ca2+ system, in comparison with Zn2+, Fe3+, and Al3+: an ab initio molecular dynamics study. Chemistry 2013;19:3047-60. [PMID: 23315704 DOI: 10.1002/chem.201202821] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2012] [Indexed: 11/08/2022]
11
GUAN QINGMEI, HAN YAN, YANG ZHONGZHI. MOLECULAR DYNAMICS STUDIES ON Fe2+, Co2+, AND Ni2+ AQUEOUS SOLUTIONS BASED ON ABEEM/MM FLUCTUATING CHARGE MODEL. JOURNAL OF THEORETICAL & COMPUTATIONAL CHEMISTRY 2011. [DOI: 10.1142/s0219633608004519] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
12
D’Angelo P, Zitolo A, Ceccacci F, Caminiti R, Aquilanti G. Structural characterization of zinc(II) chloride in aqueous solution and in the protic ionic liquid ethyl ammonium nitrate by x-ray absorption spectroscopy. J Chem Phys 2011;135:154509. [DOI: 10.1063/1.3653939] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
13
D’Angelo P, Zitolo A, Migliorati V, Bodo E, Aquilanti G, Hazemann JL, Testemale D, Mancini G, Caminiti R. X-Ray absorption spectroscopy investigation of 1-alkyl-3-methylimidazolium bromide salts. J Chem Phys 2011;135:074505. [DOI: 10.1063/1.3625920] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]  Open
14
Cauët E, Bogatko S, Weare JH, Fulton JL, Schenter GK, Bylaska EJ. Structure and dynamics of the hydration shells of the Zn(2+) ion from ab initio molecular dynamics and combined ab initio and classical molecular dynamics simulations. J Chem Phys 2010;132:194502. [PMID: 20499974 DOI: 10.1063/1.3421542] [Citation(s) in RCA: 80] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
15
Beret EC, Provost K, Müller D, Marcos ES. Coupling CP-MD Simulations and X-ray Absorption Spectroscopy: Exploring the Structure of Oxaliplatin in Aqueous Solution. J Phys Chem B 2009;113:12343-52. [DOI: 10.1021/jp905415v] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
16
Frank P, Benfatto M, Hedman B, Hodgson KO. Solution [Cu(amm)]2+ is a Strongly Solvated Square Pyramid: A Full Account of the Copper K-edge XAS Spectrum Within Single-Electron Theory. Inorg Chem 2008;47:4126-39. [DOI: 10.1021/ic7021243] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
17
Nichols P, Bylaska EJ, Schenter GK, de Jong W. Equatorial and apical solvent shells of the UO22+ ion. J Chem Phys 2008;128:124507. [DOI: 10.1063/1.2884861] [Citation(s) in RCA: 75] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]  Open
18
Carrera F, Torrico F, Richens DT, Muñoz-Paez A, Martínez JM, Pappalardo RR, Marcos ES. Combined Experimental and Theoretical Approach to the Study of Structure and Dynamics of the Most Inert Aqua Ion [Ir(H2O)6]3+ in Aqueous Solution. J Phys Chem B 2007;111:8223-33. [PMID: 17583938 DOI: 10.1021/jp0713716] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
19
Guan QM, Yang ZZ. Theoretical Study on Co3+ in Aqueous Solution in Terms of ABEEM/MM Model. CHINESE J CHEM 2007. [DOI: 10.1002/cjoc.200790136] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
20
Spezia R, Duvail M, Vitorge P, Cartailler T, Tortajada J, Chillemi G, D'Angelo P, Gaigeot MP. A Coupled Car-Parrinello Molecular Dynamics and EXAFS Data Analysis Investigation of Aqueous Co2+. J Phys Chem A 2006;110:13081-8. [PMID: 17134169 DOI: 10.1021/jp064688z] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
21
Dang LX, Schenter GK, Glezakou VA, Fulton JL. Molecular Simulation Analysis and X-ray Absorption Measurement of Ca2+, K+and Cl-Ions in Solution. J Phys Chem B 2006;110:23644-54. [PMID: 17125322 DOI: 10.1021/jp064661f] [Citation(s) in RCA: 94] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
22
Ayala R, Martínez JM, Pappalardo RR, Muñoz-Páez A, Sánchez Marcos E. The solvation of bromide anion in acetonitrile: a structural study based on the combination of theoretical calculations and X-ray absorption spectroscopy. MOLECULAR SIMULATION 2006. [DOI: 10.1080/08927020601089064] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
23
Gutowski KE, Dixon DA. Predicting the Energy of the Water Exchange Reaction and Free Energy of Solvation for the Uranyl Ion in Aqueous Solution. J Phys Chem A 2006;110:8840-56. [PMID: 16836448 DOI: 10.1021/jp061851h] [Citation(s) in RCA: 150] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
24
Chaboy J, Muñoz-Páez A, Merkling PJ, Sánchez Marcos E. The hydration of Cu2+: Can the Jahn-Teller effect be detected in liquid solution? J Chem Phys 2006;124:64509. [PMID: 16483222 DOI: 10.1063/1.2165189] [Citation(s) in RCA: 98] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
25
Hydration Structure and Dynamic Properties of the Square Planar Pt(II) Aquaion Compared to the Pd(II) Case. Theor Chem Acc 2005. [DOI: 10.1007/s00214-005-0059-z] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
26
Purans J, Fourest B, Cannes C, Sladkov V, David F, Venault L, Lecomte M. Structural Investigation of Pd(II) in Concentrated Nitric and Perchloric Acid Solutions by XAFS. J Phys Chem B 2005;109:11074-82. [PMID: 16852349 DOI: 10.1021/jp045489n] [Citation(s) in RCA: 59] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
27
Boyanov MI, Kemner KM, Shibata T, Bunker BA. Local Structure around Cr3+ Ions in Dilute Acetate and Perchlorate Aqueous Solutions. J Phys Chem A 2004. [DOI: 10.1021/jp049444y] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
28
Ligand effects on the X-ray absorption of a nickel porphyrin complex: a simulation study. Chem Phys 2004. [DOI: 10.1016/j.chemphys.2003.08.032] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
29
Chen K, Yuldasheva S, Penner-Hahn JE, O'Halloran TV. An atypical linear Cu(I)-S2 center constitutes the high-affinity metal-sensing site in the CueR metalloregulatory protein. J Am Chem Soc 2004;125:12088-9. [PMID: 14518983 DOI: 10.1021/ja036070y] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
30
Merkling PJ, Ayala R, Martı́nez JM, Pappalardo RR, Sánchez Marcos E. Interplay of computer simulations and x-ray absorption spectra in the study of the bromide hydration structure. J Chem Phys 2003. [DOI: 10.1063/1.1603719] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
31
Merkling PJ, Muñoz-Páez A, Sánchez Marcos E. Exploring the capabilities of X-ray absorption spectroscopy for determining the structure of electrolyte solutions: computed spectra for Cr(3+) or Rh(3+) in water based on molecular dynamics. J Am Chem Soc 2002;124:10911-20. [PMID: 12207547 DOI: 10.1021/ja025729h] [Citation(s) in RCA: 65] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
32
D'Angelo P, Barone V, Chillemi G, Sanna N, Meyer-Klaucke W, Pavel NV. Hydrogen and higher shell contributions in Zn2+, Ni2+, and Co2+ aqueous solutions: an X-ray absorption fine structure and molecular dynamics study. J Am Chem Soc 2002;124:1958-67. [PMID: 11866609 DOI: 10.1021/ja015685x] [Citation(s) in RCA: 155] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
33
Ayala R, Marcos ES, Díaz-Moreno S, Solé VA, Muñoz-Páez A. Geometry and Hydration Structure of Pt(II) Square Planar Complexes [Pt(H2O)4]2+and [PtCl4]2-as Studied by X-ray Absorption Spectroscopies and Quantum-Mechanical Computations. J Phys Chem B 2001. [DOI: 10.1021/jp010326+] [Citation(s) in RCA: 67] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
34
Spångberg D, Hermansson K, Lindqvist-Reis P, Jalilehvand F, Sandström M, Persson I. Model Extended X-ray Absorption Fine Structure (EXAFS) Spectra from Molecular Dynamics Data for Ca2+ and Al3+ Aqueous Solutions. J Phys Chem B 2000. [DOI: 10.1021/jp000247i] [Citation(s) in RCA: 44] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
35
Muñoz-Páez A, Díaz-Moreno S, Sánchez Marcos E, Rehr JJ. Importance of multiple-scattering phenomena in XAS structural determinations of [Ni(CN)4]2- in condensed phases. Inorg Chem 2000;39:3784-90. [PMID: 11196770 DOI: 10.1021/ic000274n] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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