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Clegg W, Nichol GS. The Sensitivity of Structure to Ionic Radius and Reaction Stoichiometry: A Crystallographic Study of Metal Coordination and Hydrogen Bonding in Barbiturate Complexes of All Five Alkali Metals Li-Cs. Molecules 2024; 29:1495. [PMID: 38611775 PMCID: PMC11012986 DOI: 10.3390/molecules29071495] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2024] [Revised: 03/23/2024] [Accepted: 03/25/2024] [Indexed: 04/14/2024] Open
Abstract
A systematic study has been conducted on barbiturate complexes of all five alkali metals, Li-Cs, prepared from metal carbonates or hydroxides in an aqueous solution without other potential ligands present, varying the stoichiometric ratio of metal ion to barbituric acid (BAH). Eight polymeric coordination compounds (two each for Na, K, and Rb and one each for Li and Cs) have been characterised by single-crystal X-ray diffraction. All contain some combination of barbiturate anion BA- (necessarily in a 1:1 ratio with the metal cation M+), barbituric acid, and water. All organic species and water molecules are coordinated to the metal centres via oxygen atoms as either terminal or bridging ligands. Coordination numbers range from 4 (for the Li complex) to 8 (for the Cs complex). Extensive hydrogen bonding plays a significant role in all the crystal structures, almost all of which include pairs of N-H···O hydrogen bonds linking BA- and/or BAH components into ribbons extending in one dimension. Factors influencing the structure adopted by each compound include cation size and reaction stoichiometry as well as hydrogen bonding.
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Affiliation(s)
- William Clegg
- Chemistry, School of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne NE1 7RU, UK;
| | - Gary S. Nichol
- Chemistry, School of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne NE1 7RU, UK;
- School of Chemistry, Joseph Black Building, University of Edinburgh, David Brewster Road, Edinburgh EH9 3FJ, UK
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Golovnev NN, Molokeev MS, Sterkhova IV, Lesnikov MK. Structure of Barbituratobis(2,2'-Dipyridyl)copper(II) Heptahydrate. RUSS J COORD CHEM+ 2019. [DOI: 10.1134/s1070328419080037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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3
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Gryl M, Rydz A, Wojnarska J, Krawczuk A, Kozieł M, Seidler T, Ostrowska K, Marzec M, Stadnicka KM. Origin of chromic effects and crystal-to-crystal phase transition in the polymorphs of tyraminium violurate. IUCRJ 2019; 6:226-237. [PMID: 30867920 PMCID: PMC6400187 DOI: 10.1107/s2052252518017037] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/08/2018] [Accepted: 11/30/2018] [Indexed: 06/09/2023]
Abstract
Chromic materials are nowadays widely used in various technological applications, however understanding the effect and the possibility of tuning the obtained colour of a material are still challenging. Here a combined experimental and theoretical study is presented on the solvatochromic and crystallochromic effects in the (pseudo)polymorphs of tyraminium violurate. This organic material exhibits a large solvatochromic shift (ca 192 nm) associated with broad colour change (from yellow to dark violet). Tyraminum violurate crystallizes as red crystals of form (I) from water as a solvate, and as an unsolvated form [violet crystals of (II)] from methanol solution. Form (I), when heated, undergoes two crystal-to-crystal phase transformations associated with colour change of the crystals. Crystals of (II) show extreme birefringence (ca 0.46) and high refractive index (n γ above 1.90), which can be correlated with preferential orientation of the resultant dipole moments of the ions. Examination of optical effects (UV-Vis spectra) along with theoretical calculations (QTAIM, atomic and bond polarizabilities) enabled the description of the origin of colour in the studied materials.
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Affiliation(s)
- Marlena Gryl
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Kraków, Poland
| | - Agnieszka Rydz
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Kraków, Poland
| | - Joanna Wojnarska
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Kraków, Poland
| | - Anna Krawczuk
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Kraków, Poland
| | - Marcin Kozieł
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Kraków, Poland
| | - Tomasz Seidler
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Kraków, Poland
| | - Katarzyna Ostrowska
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Kraków, Poland
| | - Monika Marzec
- Institute of Physics, Jagiellonian University, Łojasiewicza 11, 30-348 Kraków, Poland
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Gryl M, Kozieł M, Stadnicka KM. A proposal for coherent nomenclature of multicomponent crystals. ACTA CRYSTALLOGRAPHICA SECTION B, STRUCTURAL SCIENCE, CRYSTAL ENGINEERING AND MATERIALS 2019; 75:53-58. [PMID: 32830778 PMCID: PMC6457040 DOI: 10.1107/s2052520618015858] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/06/2018] [Accepted: 11/08/2018] [Indexed: 11/13/2022]
Abstract
Here a new, systematic, unambiguous and unified nomenclature for multicomponent materials is presented. The approach simplifies naming schemes of extraordinary co-crystals containing multiple building blocks with different charges. Although the presented examples of cytosine compounds cannot cover all possibilities, they clearly show that the new nomenclature is flexible and can be easily extended to other multicomponent materials.
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Affiliation(s)
- Marlena Gryl
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, Kraków, 30-387, Poland
| | - Marcin Kozieł
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, Kraków, 30-387, Poland
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Gryl M, Seidler T, Wojnarska J, Stadnicka K, Matulková I, Němec I, Němec P. Co-Crystals of 2-Amino-5-Nitropyridine Barbital with Extreme Birefringence and Large Second Harmonic Generation Effect. Chemistry 2018; 24:8727-8731. [PMID: 29733105 DOI: 10.1002/chem.201802057] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2018] [Indexed: 11/08/2022]
Abstract
Technological innovation enforces a revolutionized approach towards materials chemistry. In this paper a new methodology towards crystal engineering of polar materials for possible applications in linear or non-linear optics (NLO), as well as ferroelectric, pyroelectric or piezoelectric crystals is presented. The necessity to fulfil several criteria concerning symmetry, electron properties of the building blocks, and also mechanical and optical stability was achieved by fusion of a pharmaceutical molecule and an NLO-phore. Co-crystals of 2-amino-5-nitropyridine barbital, presented in this manuscript, show cutting-edge optical performance. Large second harmonic generation (SHG) efficiency (40 times better than potassium dihydrogen phosphate, KDP), extreme birefringence (2.7 times higher than for calcite), simplicity in preparation, and optical and mechanical stability of the product proves that in fact a new generation of smart materials was obtained.
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Affiliation(s)
- Marlena Gryl
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387, Kraków, Poland
| | - Tomasz Seidler
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387, Kraków, Poland
| | - Joanna Wojnarska
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387, Kraków, Poland
| | - Katarzyna Stadnicka
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387, Kraków, Poland
| | - Irena Matulková
- Faculty of Science, Department of Inorganic Chemistry, Charles University, Hlavova 2030, 128 40, Prague 2, Czech Republic
| | - Ivan Němec
- Faculty of Science, Department of Inorganic Chemistry, Charles University, Hlavova 2030, 128 40, Prague 2, Czech Republic
| | - Petr Němec
- Faculty of Mathematics and Physics, Department of Chemical Physics and Optics, Charles University, Ke Karlovu 3, 121 16, Prague 2, Czech Republic
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Wojnarska J, Gryl M, Seidler T, Stadnicka KM. Crystal engineering, optical properties and electron density distribution of polar multicomponent materials containing sulfanilamide. CrystEngComm 2018. [DOI: 10.1039/c8ce00568k] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Combination of qualitative and quantitative crystal engineering tools for efficient design and detailed analysis of novel functional materials.
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Affiliation(s)
| | - Marlena Gryl
- Faculty of Chemistry
- Jagiellonian University
- 30-387 Kraków
- Poland
| | - Tomasz Seidler
- Faculty of Chemistry
- Jagiellonian University
- 30-387 Kraków
- Poland
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Cherukuvada S, Kaur R, Guru Row TN. Co-crystallization and small molecule crystal form diversity: from pharmaceutical to materials applications. CrystEngComm 2016. [DOI: 10.1039/c6ce01835a] [Citation(s) in RCA: 113] [Impact Index Per Article: 14.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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