DOVE: An Infectious Disease Outbreak Statistics Visualization System

Potential RNA-dependent RNA polymerase (RdRp) inhibitors as prospective drug candidates for SARS-CoV-2

The SARS-CoV-2 pandemic is considered as one of the most disastrous pandemics for human health and the world economy. RNA-dependent RNA polymerase (RdRp) is one of the key enzymes that control viral replication. RdRp is an attractive and promising therapeutic target for the treatment of SARS-CoV-2 disease. It has attracted much interest of medicinal chemists, especially after the approval of Remdesivir. This study highlights the most promising SARS-CoV-2 RdRp repurposed drugs in addition to natural and synthetic agents. Although many in silico predicted agents have been developed, the lack of in vitro and in vivo experimental data has hindered their application in drug discovery programs.

Data-driven dynamic clustering framework for mitigating the adverse economic impact of Covid-19 lockdown practices

The COVID-19 disease has once again reiterated the impact of pandemics beyond a biomedical event with potential rapid, dramatic, sweeping disruptions to the management, and conduct of everyday life. Not only the rate and pattern of contagion that threaten our sense of healthy living but also the safety measures put in place for containing the spread of the virus may require social distancing. Three different measures to counteract this pandemic situation have emerged, namely: (i) vaccination, (ii) herd immunity development, and (iii) lockdown. As the first measure is not ready at this stage and the second measure is largely considered unreasonable on the account of the gigantic number of fatalities, a vast majority of countries have practiced the third option despite having a potentially immense adverse economic impact. To mitigate such an impact, this paper proposes a data-driven dynamic clustering framework for moderating the adverse economic impact of COVID-19 flare-up. Through an intelligent fusion of healthcare and simulated mobility data, we model lockdown as a clustering problem and design a dynamic clustering algorithm for localized lockdown by taking into account the pandemic, economic and mobility aspects. We then validate the proposed algorithms by conducting extensive simulations using the Malaysian context as a case study. The findings signify the promises of dynamic clustering for lockdown coverage reduction, reduced economic loss, and military unit deployment reduction, as well as assess potential impact of uncooperative civilians on the contamination rate. The outcome of this work is anticipated to pave a way for significantly reducing the severe economic impact of the COVID-19 spreading. Moreover, the idea can be exploited for potentially the next waves of corona virus-related diseases and other upcoming viral life-threatening calamities.

Survey of Decentralized Solutions with Mobile Devices for User Location Tracking, Proximity Detection, and Contact Tracing in the COVID-19 Era

Some of the recent developments in data science for worldwide disease control have involved research of large-scale feasibility and usefulness of digital contact tracing, user location tracking, and proximity detection on users’ mobile devices or wearables. A centralized solution relying on collecting and storing user traces and location information on a central server can provide more accurate and timely actions than a decentralized solution in combating viral outbreaks, such as COVID-19. However, centralized solutions are more prone to privacy breaches and privacy attacks by malevolent third parties than decentralized solutions, storing the information in a distributed manner among wireless networks. Thus, it is of timely relevance to identify and summarize the existing privacy-preserving solutions, focusing on decentralized methods, and analyzing them in the context of mobile device-based localization and tracking, contact tracing, and proximity detection. Wearables and other mobile Internet of Things devices are of particular interest in our study, as not only privacy, but also energy-efficiency, targets are becoming more and more critical to the end-users. This paper provides a comprehensive survey of user location-tracking, proximity-detection, and digital contact-tracing solutions in the literature from the past two decades, analyses their advantages and drawbacks concerning centralized and decentralized solutions, and presents the authors’ thoughts on future research directions in this timely research field.

PEACOCK: A Map-Based Multitype Infectious Disease Outbreak Information System

A map-based infectious disease outbreak information system, called PEACOCK, that provides three types of necessary infectious disease outbreak information is presented. The system first collects the infectious disease outbreak statistics from the government agencies and displays the number of infected people and infection indices on the map. Then, it crawls online news articles for each infectious disease and displays the number of mentions of each disease on the map. Users can also search for news articles regarding the disease. Finally, it retrieves the portal search query data and plots the graphs of the trends. It divides the risk into three levels (i.e., normal, caution, and danger) and visualizes them using different colors on the map. Users can access infectious disease outbreak information accurately and quickly using the system. As the system visualizes the information using both a map and various types of graphs, users can check the information at a glance. This system is in live at http://www.epidemic.co.kr/map.