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Meinardi VB, López JMD, Fajreldines HD, Boyallian C, Balzarini M. Linear mixed-effect models for correlated response to process electroencephalogram recordings. Cogn Neurodyn 2024; 18:1197-1207. [PMID: 38826650 PMCID: PMC11143122 DOI: 10.1007/s11571-023-09984-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2022] [Revised: 04/06/2023] [Accepted: 05/31/2023] [Indexed: 06/04/2024] Open
Abstract
A data set of clinical studies of electroencephalogram recordings (EEG) following data acquisition protocols in control individuals (Eyes Closed Wakefulness - Eyes Open Wakefulness, Hyperventilation, and Optostimulation) are quantified with information theory metrics, namely permutation Shanon entropy and permutation Lempel Ziv complexity, to identify functional changes. This work implement Linear mixed-effects models (LMEMs) for confirmatory hypothesis testing. The results show that EEGs have high variability for both metrics and there is a positive correlation between them. The mean of permutation Lempel-Ziv complexity and permutation Shanon entropy used simultaneously for each of the four states are distinguishable from each other. However, used separately, the differences between permutation Lempel-Ziv complexity or permutation Shanon entropy of some states were not statistically significant. This shows that the joint use of both metrics provides more information than the separate use of each of them. Despite their wide use in medicine, LMEMs have not been commonly applied to simultaneously model metrics that quantify EEG signals. Modeling EEGs using a model that characterizes more than one response variable and their possible correlations represents a new way of analyzing EEG data in neuroscience.
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Affiliation(s)
- Vanesa B. Meinardi
- I.A.P Ciencias Humanas, Universidad Nacional de Villa María, Arturo Jauretche 1555, 5900 Villa María, Córdoba, Argentina
- Centro de Investigación y Transferencia. UNVM, Arturo Jauretche 1555, 5900 Córdoba, Argentina
| | - Juan M. Díaz López
- Instituto Argentino de Ciencias de la Conducta (IACCo), Entre Ríos 419, 5000 Córdoba, Argentina
- Facultad de Matemática, Física, Astronomía y Computación, Universidad Nacional de Córdoba. Haya de la Torre y Medina Allende, Ciudad Universitaria, 5000 Córdoba, Argentina
- Facultad de Ciencias Químicas, Universidad Nacional de Córdoba. Haya de la Torre y Medina Allende, Ciudad Universitaria, 5000 Córdoba, Argentina
| | - Hugo Diaz Fajreldines
- Departamento de Investigaciones Biomédicas, Instituto Privado de Neurociencias. Felix, Fríaz 129, 5000 Córdoba, Argentina
- Facultad de Ciencias Químicas, Universidad Nacional de Córdoba. Haya de la Torre y Medina Allende, Ciudad Universitaria, 5000 Córdoba, Argentina
| | - Carina Boyallian
- Centro de Investigación y Estudios de Matemática. Famaf, UNC., Haya de la Torre y Medina Allende, Ciudad Universitaria, 5000 Córdoba, Argentina
- Facultad de Matemática, Física, Astronomía y Computación, Universidad Nacional de Córdoba. Haya de la Torre y Medina Allende, Ciudad Universitaria, 5000 Córdoba, Argentina
| | - Monica Balzarini
- Estadística y Biometría, Universidad Nacional de Córdoba, UFYMA INTA-CONICET. Camino 60 cuadras km 5 1/2 s/n, 5020 Córdoba, Argentina
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Konstantinovsky T, Yaari G. A novel approach to T-cell receptor beta chain (TCRB) repertoire encoding using lossless string compression. Bioinformatics 2023; 39:btad426. [PMID: 37417959 PMCID: PMC10348835 DOI: 10.1093/bioinformatics/btad426] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2023] [Revised: 06/18/2023] [Accepted: 07/06/2023] [Indexed: 07/08/2023] Open
Abstract
MOTIVATION T-cell receptor beta chain (TCRB) repertoires are crucial for understanding immune responses. However, their high diversity and complexity present significant challenges in representation and analysis. The main motivation of this study is to develop a unified and compact representation of a TCRB repertoire that can efficiently capture its inherent complexity and diversity and allow for direct inference. RESULTS We introduce a novel approach to TCRB repertoire encoding and analysis, leveraging the Lempel-Ziv 76 algorithm. This approach allows us to create a graph-like model, identify-specific sequence features, and produce a new encoding approach for an individual's repertoire. The proposed representation enables various applications, including generation probability inference, informative feature vector derivation, sequence generation, a new measure for diversity estimation, and a new sequence centrality measure. The approach was applied to four large-scale public TCRB sequencing datasets, demonstrating its potential for a wide range of applications in big biological sequencing data. AVAILABILITY AND IMPLEMENTATION Python package for implementation is available https://github.com/MuteJester/LZGraphs.
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Affiliation(s)
- Thomas Konstantinovsky
- Faculty of Engineering, Bar Ilan University, Ramat Gan 5290002, Israel
- Bar Ilan Institute of Nanotechnology and Advanced Materials, Bar Ilan University, Ramat Gan 5290002, Israel
| | - Gur Yaari
- Faculty of Engineering, Bar Ilan University, Ramat Gan 5290002, Israel
- Bar Ilan Institute of Nanotechnology and Advanced Materials, Bar Ilan University, Ramat Gan 5290002, Israel
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3
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Ding Z, Guan L, He W, Gu H, Wang Y, Li X. Spatial characteristics of closed-loop TMS-EEG with occipital alpha-phase synchronized. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2023.104650] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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Liu Y, Zeng W, Pan N, Xia X, Huang Y, He J. EEG complexity correlates with residual consciousness level of disorders of consciousness. BMC Neurol 2023; 23:140. [PMID: 37013466 PMCID: PMC10069047 DOI: 10.1186/s12883-023-03167-w] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2022] [Accepted: 03/15/2023] [Indexed: 04/05/2023] Open
Abstract
BACKGROUND AND OBJECTIVE Electroencephalography (EEG) and neuroimaging measurements have been highly encouraged to be applied in clinics of disorders of consciousness (DOC) to improve consciousness detection. We tested the relationships between neural complexity measured on EEG and residual consciousness levels in DOC patients. METHODS Resting-state EEG was recorded from twenty-five patients with DOC. Lempel-Ziv complexity (LZC) and permutation Lempel-Ziv complexity (PLZC) were measured on the EEG, and their relationships were analyzed with the consciousness levels of the patients. RESULTS PLZC and LZC values significantly distinguished patients with a minimally conscious state (MCS), vegetative state/unresponsive wakefulness syndrome (VS/UWS), and healthy controls. PLZC was significantly correlated with the Coma Recovery Scale-Revised (CRS-R) scores of DOC patients in the global brain, particularly in electrodes locating in the anterior and posterior brain regions. Patients with higher CRS-R scores showed higher PLZC values. The significant difference in PLZC values between MCS and VS/UWS was mainly located in the bilateral frontal and right hemisphere regions. CONCLUSION Neural complexity measured on EEG correlates with residual consciousness levels of DOC patients. PLZC showed higher sensitivity than LZC in the classification of consciousness levels.
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Affiliation(s)
- Yangfeng Liu
- Xijing 986 Hospital Department, Fourth Military Medical University, Xi'an, China
- The Seventh Medical Center of PLA General Hospital, Beijing, China
| | - Wentao Zeng
- Department of Medical Imaging, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China
| | - Na Pan
- Xijing 986 Hospital Department, Fourth Military Medical University, Xi'an, China
| | - Xiaoyu Xia
- The Seventh Medical Center of PLA General Hospital, Beijing, China
| | - Yonghua Huang
- The Seventh Medical Center of PLA General Hospital, Beijing, China
| | - Jianghong He
- Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing, China.
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Chelidze T, Matcharashvili T, Mepharidze E, Dovgal N. Complexity in Geophysical Time Series of Strain/Fracture at Laboratory and Large Dam Scales: Review. ENTROPY (BASEL, SWITZERLAND) 2023; 25:467. [PMID: 36981355 PMCID: PMC10048261 DOI: 10.3390/e25030467] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/06/2023] [Revised: 03/02/2023] [Accepted: 03/02/2023] [Indexed: 06/18/2023]
Abstract
One of the interesting directions of complexity theory is the investigation of the synchronization of mechanical behavior of large-scale systems by weak forcing, which is one of manifestations of nonlinearity/complexity of a system. The effect of periodic weak mechanical or electromagnetic forcing leading to synchronization was studied on the laboratory load-spring system as well as on a big dam's strain data. Due to synchronization, the phase space structure of the forced system strongly depends on the weak forcing intensity-determinism show itself in the recurrence of definite states of the forced system. The nonlinear dynamics of tilts/strains/seismicity near grand dams reflect both the complexity of the mentioned time series, connected with the natural agents (regional and local geodynamics), which were presented even before dam erection, as well as the effects of the water level (WL) variation in the reservoir, which is a quasi-periodic forcing superimposed on the natural geodynamic background. Both these effects are documented by the almost half-century of observations at the large Enguri Dam. The obtained data on the dynamics of strain/seismicity near a large dam can be used for the assessment of the possible risks, connected with the abrupt change of routine dynamics of construction.
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Cuesta-Frau D, Kouka M, Silvestre-Blanes J, Sempere-Payá V. Slope Entropy Normalisation by Means of Analytical and Heuristic Reference Values. ENTROPY (BASEL, SWITZERLAND) 2022; 25:66. [PMID: 36673207 PMCID: PMC9858583 DOI: 10.3390/e25010066] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/04/2022] [Revised: 12/22/2022] [Accepted: 12/23/2022] [Indexed: 06/17/2023]
Abstract
Slope Entropy (SlpEn) is a very recently proposed entropy calculation method. It is based on the differences between consecutive values in a time series and two new input thresholds to assign a symbol to each resulting difference interval. As the histogram normalisation value, SlpEn uses the actual number of unique patterns found instead of the theoretically expected value. This maximises the information captured by the method but, as a consequence, SlpEn results do not usually fall within the classical [0,1] interval. Although this interval is not necessary at all for time series classification purposes, it is a convenient and common reference framework when entropy analyses take place. This paper describes a method to keep SlpEn results within this interval, and improves the interpretability and comparability of this measure in a similar way as for other methods. It is based on a max-min normalisation scheme, described in two steps. First, an analytic normalisation is proposed using known but very conservative bounds. Afterwards, these bounds are refined using heuristics about the behaviour of the number of patterns found in deterministic and random time series. The results confirm the suitability of the approach proposed, using a mixture of the two methods.
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Affiliation(s)
- David Cuesta-Frau
- Technological Institute of Informatics (ITI), Universitat Politècnica de València, Alcoi Campus, 03801 Alcoi, Spain
| | - Mahdy Kouka
- Department of System Informatics and Computers, Universitat Politècnica de València, 46022 Valencia, Spain
| | - Javier Silvestre-Blanes
- Technological Institute of Informatics (ITI), Universitat Politècnica de València, Alcoi Campus, 03801 Alcoi, Spain
| | - Víctor Sempere-Payá
- Technological Institute of Informatics (ITI), Universitat Politècnica de València, Alcoi Campus, 03801 Alcoi, Spain
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Sympathetic Vagal Balance and Cognitive Performance in Young Adults during the NIH Cognitive Test. J Funct Morphol Kinesiol 2022; 7:jfmk7030059. [PMID: 35997375 PMCID: PMC9397067 DOI: 10.3390/jfmk7030059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Revised: 08/15/2022] [Accepted: 08/16/2022] [Indexed: 11/16/2022] Open
Abstract
Compromised cognitive function is associated with increased mortality and increased healthcare costs. Autonomic nervous system arousal, as measured by an electrocardiogram (ECG), has received recent attention because of its association with the blood perfusion of brain regions involved with cognitive function. The purposes of this study were to determine whether the ECG HR variation, as measured by the standard deviation of the heart rate N-to-N intervals (SDNN), and sympathetic vagal tone, as estimated by the low-frequency/high-frequency ratio (LF/HF), are increased with cognitive performance during the NIH Cognitive Test (Picture Sequence, Dimensional Change Card Sort, Flanker, and List Sorting). A total of 62 young people without cognitive impairment participated in this study. We discovered that the ECG LF/HF ratio was increased in the top 50% of participants who could: (1) inhibit information and stay attentive to a desired task during the Flanker Test; (U = 329, p = 0.03; R2 = 0.76); and (2) promote cognitive function flexibility during the DCCS Test; (U = 55, p = 0.007; R2 = 0.98). Taken together, these findings support that the arousal level influences performance during a cognitive test.
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Abstract
A complex system is often associated with emergence of new phenomena from the interactions between the system's components. General anesthesia reduces brain complexity and so inhibits the emergence of consciousness. An understanding of complexity is necessary for the interpretation of brain monitoring algorithms. Complexity indices capture the "difficulty" of understanding brain activity over time and/or space. Complexity-entropy plots reveal the types of complexity indices and their balance of randomness and structure. Lempel-Ziv complexity is a common index of temporal complexity for single-channel electroencephalogram containing both power spectral and nonlinear effects, revealed by phase-randomized surrogate data. Computing spatial complexities involves forming a connectivity matrix and calculating the complexity of connectivity patterns. Spatiotemporal complexity can be estimated in multiple ways including temporal or spatial concatenation, estimation of state switching, or integrated information. This article illustrates the concept and application of various complexities by providing working examples; a website with interactive demonstrations has also been created.
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Arpaia P, Covino A, Cristaldi L, Frosolone M, Gargiulo L, Mancino F, Mantile F, Moccaldi N. A Systematic Review on Feature Extraction in Electroencephalography-Based Diagnostics and Therapy in Attention Deficit Hyperactivity Disorder. SENSORS 2022; 22:s22134934. [PMID: 35808424 PMCID: PMC9269717 DOI: 10.3390/s22134934] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/16/2022] [Revised: 06/22/2022] [Accepted: 06/27/2022] [Indexed: 02/01/2023]
Abstract
A systematic review on electroencephalographic (EEG)-based feature extraction strategies to diagnosis and therapy of attention deficit hyperactivity disorder (ADHD) in children is presented. The analysis is realized at an executive function level to improve the research of neurocorrelates of heterogeneous disorders such as ADHD. The Quality Assessment Tool for Quantitative Studies (QATQS) and field-weighted citation impact metric (Scopus) were used to assess the methodological rigor of the studies and their impact on the scientific community, respectively. One hundred and one articles, concerning the diagnostics and therapy of ADHD children aged from 8 to 14, were collected. Event-related potential components were mainly exploited for executive functions related to the cluster inhibition, whereas band power spectral density is the most considered EEG feature for executive functions related to the cluster working memory. This review identifies the most used (also by rigorous and relevant articles) EEG signal processing strategies for executive function assessment in ADHD.
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Affiliation(s)
- Pasquale Arpaia
- Department of Electrical Engineering and Information Technologies (DIETI), University of Naples “Federico II”, 80121 Naples, Italy; (M.F.); (L.G.); (F.M.); (N.M.)
- Interdepartmental Research Center on Management and Innovation in Healthcare (CIRMIS), University of Naples “Federico II”, 80121 Naples, Italy
- Correspondence:
| | - Attilio Covino
- Villa delle Ginestre, Rehabilitation Center, 80040 Naples, Italy; (A.C.); (F.M.)
| | - Loredana Cristaldi
- Department of Electronics, Information e Bioengineering, Milan Polytechnic, 20133 Milan, Italy;
| | - Mirco Frosolone
- Department of Electrical Engineering and Information Technologies (DIETI), University of Naples “Federico II”, 80121 Naples, Italy; (M.F.); (L.G.); (F.M.); (N.M.)
| | - Ludovica Gargiulo
- Department of Electrical Engineering and Information Technologies (DIETI), University of Naples “Federico II”, 80121 Naples, Italy; (M.F.); (L.G.); (F.M.); (N.M.)
| | - Francesca Mancino
- Department of Electrical Engineering and Information Technologies (DIETI), University of Naples “Federico II”, 80121 Naples, Italy; (M.F.); (L.G.); (F.M.); (N.M.)
| | - Federico Mantile
- Villa delle Ginestre, Rehabilitation Center, 80040 Naples, Italy; (A.C.); (F.M.)
| | - Nicola Moccaldi
- Department of Electrical Engineering and Information Technologies (DIETI), University of Naples “Federico II”, 80121 Naples, Italy; (M.F.); (L.G.); (F.M.); (N.M.)
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10
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Kolmogorov Complexity Analysis and Prediction Horizon of the Daily Erythemal Dose Time Series. ATMOSPHERE 2022. [DOI: 10.3390/atmos13050746] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Influenced by stratospheric total ozone column (TOC), cloud cover, aerosols, albedo, and other factors, levels of daily erythemal dose (Her) in a specific geographic region show significant variability in time and space. To investigate the degree of randomness and predictability of Her time series from ground-based observations in Novi Sad, Serbia, during the 2003–2012 time period, we used a set of information measures: Kolmogorov complexity, Kolmogorov complexity spectrum, running Kolmogorov complexity, the largest Lyapunov exponent, Lyapunov time, and Kolmogorov time. The result reveals that fluctuations in daily Her are moderately random and exhibit low levels of chaotic behavior. We found a larger number of occurrences of deviation from the mean in the time series during the years with lower values of Her (2007–2009, 2011–2012), which explains the higher complexity. Our analysis indicated that the time series of daily values of Her show a tendency to increase the randomness when the randomness of cloud cover and TOC increases, which affects the short-term predictability. The prediction horizon of daily Her values in Novi Sad given by the Lyapunov time corrected for randomness by Kolmogorov is between 1.5 and 3.5 days.
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Fonseca A, Deolindo CS, Miranda T, Morya E, Amaro Jr E, Machado BS. A cluster based model for brain activity data staging. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2021.103200] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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12
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Yan X, She D, Xu Y, Jia M. Application of Generalized Composite Multiscale Lempel-Ziv Complexity in Identifying Wind Turbine Gearbox Faults. ENTROPY 2021; 23:e23111372. [PMID: 34828071 PMCID: PMC8625407 DOI: 10.3390/e23111372] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/18/2021] [Revised: 10/15/2021] [Accepted: 10/18/2021] [Indexed: 11/17/2022]
Abstract
Wind turbine gearboxes operate in harsh environments; therefore, the resulting gear vibration signal has characteristics of strong nonlinearity, is non-stationary, and has a low signal-to-noise ratio, which indicates that it is difficult to identify wind turbine gearbox faults effectively by the traditional methods. To solve this problem, this paper proposes a new fault diagnosis method for wind turbine gearboxes based on generalized composite multiscale Lempel–Ziv complexity (GCMLZC). Within the proposed method, an effective technique named multiscale morphological-hat convolution operator (MHCO) is firstly presented to remove the noise interference information of the original gear vibration signal. Then, the GCMLZC of the filtered signal was calculated to extract gear fault features. Finally, the extracted fault features were input into softmax classifier for automatically identifying different health conditions of wind turbine gearboxes. The effectiveness of the proposed method was validated by the experimental and engineering data analysis. The results of the analysis indicate that the proposed method can identify accurately different gear health conditions. Moreover, the identification accuracy of the proposed method is higher than that of traditional multiscale Lempel–Ziv complexity (MLZC) and several representative multiscale entropies (e.g., multiscale dispersion entropy (MDE), multiscale permutation entropy (MPE) and multiscale sample entropy (MSE)).
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Affiliation(s)
- Xiaoan Yan
- School of Mechatronics Engineering, Nanjing Forestry University, Nanjing 210037, China
- Correspondence: ; Tel.: +86-025-85427779
| | - Daoming She
- School of Mechanical Engineering, Jiangsu University, Zhenjiang 212013, China;
| | - Yadong Xu
- School of Mechanical Engineering, Southeast University, Nanjing 211189, China; (Y.X.); (M.J.)
| | - Minping Jia
- School of Mechanical Engineering, Southeast University, Nanjing 211189, China; (Y.X.); (M.J.)
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Classification of intracavitary electrograms in atrial fibrillation using information and complexity measures. Biomed Signal Process Control 2020. [DOI: 10.1016/j.bspc.2019.101753] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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14
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Yakovleva TV, Kutepov IE, Karas AY, Yakovlev NM, Dobriyan VV, Papkova IV, Zhigalov MV, Saltykova OA, Krysko AV, Yaroshenko TY, Erofeev NP, Krysko VA. EEG Analysis in Structural Focal Epilepsy Using the Methods of Nonlinear Dynamics (Lyapunov Exponents, Lempel-Ziv Complexity, and Multiscale Entropy). ScientificWorldJournal 2020; 2020:8407872. [PMID: 32095119 PMCID: PMC7036140 DOI: 10.1155/2020/8407872] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2019] [Revised: 01/04/2020] [Accepted: 01/09/2020] [Indexed: 11/18/2022] Open
Abstract
This paper analyzes a case with the patient having focal structural epilepsy by processing electroencephalogram (EEG) fragments containing the "sharp wave" pattern of brain activity. EEG signals were recorded using 21 channels. Based on the fact that EEG signals are time series, an approach has been developed for their analysis using nonlinear dynamics tools: calculating the Lyapunov exponent's spectrum, multiscale entropy, and Lempel-Ziv complexity. The calculation of the first Lyapunov exponent is carried out by three methods: Wolf, Rosenstein, and Sano-Sawada, to obtain reliable results. The seven Lyapunov exponent spectra are calculated by the Sano-Sawada method. For the observed patient, studies showed that with medical treatment, his condition did not improve, and as a result, it was recommended to switch from conservative treatment to surgical. The obtained results of the patient's EEG study using the indicated nonlinear dynamics methods are in good agreement with the medical report and MRI data. The approach developed for the analysis of EEG signals by nonlinear dynamics methods can be applied for early detection of structural changes.
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Affiliation(s)
- Tatiana V. Yakovleva
- Department of Mathematics and Modelling, Yuri Gagarin State Technical University of Saratov, Saratov 410054, Russia
| | - Ilya E. Kutepov
- Department of Mathematics and Modelling, Yuri Gagarin State Technical University of Saratov, Saratov 410054, Russia
| | - Antonina Yu Karas
- Medical Center of Neurology, Diagnosis and Treatment of Epilepsy “Epineiro”, Saratov 410054, Russia
| | - Nikolai M. Yakovlev
- Medical Center of Neurology, Diagnosis and Treatment of Epilepsy “Epineiro”, Saratov 410054, Russia
| | - Vitalii V. Dobriyan
- Department of Mathematics and Modelling, Yuri Gagarin State Technical University of Saratov, Saratov 410054, Russia
| | - Irina V. Papkova
- Department of Mathematics and Modelling, Yuri Gagarin State Technical University of Saratov, Saratov 410054, Russia
| | - Maxim V. Zhigalov
- Department of Mathematics and Modelling, Yuri Gagarin State Technical University of Saratov, Saratov 410054, Russia
| | - Olga A. Saltykova
- Department of Mathematics and Modelling, Yuri Gagarin State Technical University of Saratov, Saratov 410054, Russia
| | - Anton V. Krysko
- Department of Mathematics and Modelling, Yuri Gagarin State Technical University of Saratov, Saratov 410054, Russia
| | - Tatiana Yu Yaroshenko
- Department of Mathematics and Modelling, Yuri Gagarin State Technical University of Saratov, Saratov 410054, Russia
| | - Nikolai P. Erofeev
- Department of Mathematics and Modelling, Yuri Gagarin State Technical University of Saratov, Saratov 410054, Russia
| | - Vadim A. Krysko
- Department of Mathematics and Modelling, Yuri Gagarin State Technical University of Saratov, Saratov 410054, Russia
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Complexity Changes in the US and China's Stock Markets: Differences, Causes, and Wider Social Implications. ENTROPY 2020; 22:e22010075. [PMID: 33285851 PMCID: PMC7516507 DOI: 10.3390/e22010075] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/01/2019] [Revised: 12/28/2019] [Accepted: 01/04/2020] [Indexed: 01/08/2023]
Abstract
How different are the emerging and the well-developed stock markets in terms of efficiency? To gain insights into this question, we compared an important emerging market, the Chinese stock market, and the largest and the most developed market, the US stock market. Specifically, we computed the Lempel–Ziv complexity (LZ) and the permutation entropy (PE) from two composite stock indices, the Shanghai stock exchange composite index (SSE) and the Dow Jones industrial average (DJIA), for both low-frequency (daily) and high-frequency (minute-to-minute)stock index data. We found that the US market is basically fully random and consistent with efficient market hypothesis (EMH), irrespective of whether low- or high-frequency stock index data are used. The Chinese market is also largely consistent with the EMH when low-frequency data are used. However, a completely different picture emerges when the high-frequency stock index data are used, irrespective of whether the LZ or PE is computed. In particular, the PE decreases substantially in two significant time windows, each encompassing a rapid market rise and then a few gigantic stock crashes. To gain further insights into the causes of the difference in the complexity changes in the two markets, we computed the Hurst parameter H from the high-frequency stock index data of the two markets and examined their temporal variations. We found that in stark contrast with the US market, whose H is always close to 1/2, which indicates fully random behavior, for the Chinese market, H deviates from 1/2 significantly for time scales up to about 10 min within a day, and varies systemically similar to the PE for time scales from about 10 min to a day. This opens the door for large-scale collective behavior to occur in the Chinese market, including herding behavior and large-scale manipulation as a result of inside information.
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Chipperfield AJ, Thanaj M, Clough GF. Multiscale, multidomain analysis of microvascular flow dynamics. Exp Physiol 2019; 105:1452-1458. [PMID: 31875329 DOI: 10.1113/ep087874] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2019] [Accepted: 12/23/2019] [Indexed: 12/17/2022]
Abstract
NEW FINDINGS What is the topic of this review? We describe a range of techniques in the time, frequency and information domains and their application alone and together for the analysis of blood flux signals acquired using laser Doppler fluximetry. What advances does it highlight? This review highlights the idea of using quantitative measures in different domains and scales to gain a better mechanistic understanding of the complex behaviours in the microcirculation. ABSTRACT To date, time- and frequency-domain metrics of signals acquired through laser Doppler fluximetry have been unable to provide consistent and robust measures of the changes that occur in the microcirculation in healthy individuals at rest or in response to a provocation, or in patient cohorts. Recent studies have shown that in many disease states, such as metabolic and cardiovascular disease, there appears to be a reduction in the adaptive capabilities of the microvascular network and a consequent reduction in physiological information content. Here, we introduce non-linear measures for assessing the information content of fluximetry signals and demonstrate how they can yield deeper understanding of network behaviour. In addition, we show how these methods may be adapted to accommodate the multiple time scales modulating blood flow and how they can be used in combination with time- and frequency-domain metrics to discriminate more effectively between the different mechanistic influences on network properties.
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Affiliation(s)
- A J Chipperfield
- Faculty of Engineering and Physical Sciences, University of Southampton, Southampton, UK
| | - M Thanaj
- Faculty of Engineering and Physical Sciences, University of Southampton, Southampton, UK
| | - G F Clough
- Faculty of Medicine, University of Southampton, Southampton, UK
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17
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Zhang Y, Wang C, Wu F, Huang K, Yang L, Ji L. Prediction of working memory ability based on EEG by functional data analysis. J Neurosci Methods 2019; 333:108552. [PMID: 31866319 DOI: 10.1016/j.jneumeth.2019.108552] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2019] [Revised: 12/14/2019] [Accepted: 12/15/2019] [Indexed: 11/17/2022]
Abstract
BACKGROUND There is always a demand for fast and accurate algorithms for EEG signal processing. Owing to the high sample rate, EEG signals usually come with a large number of sample points, making it difficult to predict the working memory ability in cognitive research with EEG. NEW METHOD Following well-designed experiments, the functional linear model provides a simple framework for regressions involving EEG signal predictors. The use of a data-driven basis in a linear structure naturally extends the standard linear regression model. The proposed approach utilizes B-spline approximation of functional principal components that greatly facilitates implementation. RESULTS Using LASSO feature selection, critical features have been extracted from eight frontal electrodes, and the R-square of 0.72 indicates rather strong linear association of actual observations and out-of-sample predictions. COMPARISON WITH EXISTING METHODS There does not seem to be any existing methods of predicting working memory ability from N-back task tests via EEG signals; the data-driven functional linear regression method proposed in this work is, to the best of our knowledge, the first of its kind. CONCLUSIONS The data analytics suggest that a multiple functional linear regression model for the predictive relationship between working memory ability and frontal activity of the brain is both feasible and accurate via EEG signal processing.
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Affiliation(s)
- Yuanyuan Zhang
- Center for Statistical Science and Department of Industrial Engineering, Tsinghua University, Beijing, 100084, China.
| | - Chienkai Wang
- Division of Intelligent and Biomechanical System, State Key Laboratory of Tribology, Department of Mechanical Engineering, Tsinghua University, Beijing, 100084, China.
| | - Fangfang Wu
- Division of Intelligent and Biomechanical System, State Key Laboratory of Tribology, Department of Mechanical Engineering, Tsinghua University, Beijing, 100084, China
| | - Kun Huang
- Center for Statistical Science and Department of Industrial Engineering, Tsinghua University, Beijing, 100084, China
| | - Lijian Yang
- Center for Statistical Science and Department of Industrial Engineering, Tsinghua University, Beijing, 100084, China.
| | - Linhong Ji
- Division of Intelligent and Biomechanical System, State Key Laboratory of Tribology, Department of Mechanical Engineering, Tsinghua University, Beijing, 100084, China.
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18
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Pregowska A, Proniewska K, van Dam P, Szczepanski J. Using Lempel-Ziv complexity as effective classification tool of the sleep-related breathing disorders. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2019; 182:105052. [PMID: 31476448 DOI: 10.1016/j.cmpb.2019.105052] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2019] [Revised: 08/14/2019] [Accepted: 08/24/2019] [Indexed: 06/10/2023]
Abstract
BACKGROUND AND OBJECTIVE People suffer from sleep disorders caused by work-related stress, irregular lifestyle or mental health problems. Therefore, development of effective tools to diagnose sleep disorders is important. Recently, to analyze biomedical signals Information Theory is exploited. We propose efficient classification method of sleep anomalies by applying entropy estimating algorithms to encoded ECGs signals coming from patients suffering from Sleep-Related Breathing Disorders (SRBD). METHODS First, ECGs were discretized using the encoding method which captures the biosignals variability. It takes into account oscillations of ECG measurements around signals averages. Next, to estimate entropy of encoded signals Lempel-Ziv complexity algorithm (LZ) which measures patterns generation rate was applied. Then, optimal encoding parameters, which allow distinguishing normal versus abnormal events during sleep with high sensitivity and specificity were determined numerically. Simultaneously, subjects' states were identified using acoustic signal of breathing recorded in the same period during sleep. RESULTS Random sequences show normalized LZ close to 1 while for more regular sequences it is closer to 0. Our calculations show that SRBDs have normalized LZ around 0.32 (on average), while control group has complexity around 0.85. The results obtained to public database are similar, i.e. LZ for SRBDs around 0.48 and for control group 0.7. These show that signals within the control group are more random whereas for the SRBD group ECGs are more deterministic. This finding remained valid for both signals acquired during the whole duration of experiment, and when shorter time intervals were considered. Proposed classifier provided sleep disorders diagnostics with a sensitivity of 93.75 and specificity of 73.00%. To validate our method we have considered also different variants as a training and as testing sets. In all cases, the optimal encoding parameter, sensitivity and specificity values were similar to our results above. CONCLUSIONS Our pilot study suggests that LZ based algorithm could be used as a clinical tool to classify sleep disorders since the LZ complexities for SRBD positives versus healthy individuals show a significant difference. Moreover, normalized LZ complexity changes are related to the snoring level. This study also indicates that LZ technique is able to detect sleep abnormalities in early disorders stage.
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Affiliation(s)
- Agnieszka Pregowska
- Institute of Fundamental Technological Research, Polish Academy of Sciences, Pawinskiego 5B, 02-106 Warsaw, Poland
| | - Klaudia Proniewska
- Jagiellonian University Medical College, Lazarza 16, 31-530 Krakow, Poland
| | - Peter van Dam
- PEACS BV, Weyland 38 2415 BC Nieuwerbrug, the Netherlands
| | - Janusz Szczepanski
- Institute of Fundamental Technological Research, Polish Academy of Sciences, Pawinskiego 5B, 02-106 Warsaw, Poland.
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19
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Enhanced flow-motion complexity of skin microvascular perfusion in Sherpas and lowlanders during ascent to high altitude. Sci Rep 2019; 9:14391. [PMID: 31591502 PMCID: PMC6779732 DOI: 10.1038/s41598-019-50774-0] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2019] [Accepted: 09/13/2019] [Indexed: 12/17/2022] Open
Abstract
An increased and more effective microvascular perfusion is postulated to play a key role in the physiological adaptation of Sherpa highlanders to the hypobaric hypoxia encountered at high altitude. To investigate this, we used Lempel-Ziv complexity (LZC) analysis to explore the spatiotemporal dynamics of the variability of the skin microvascular blood flux (BF) signals measured at the forearm and finger, in 32 lowlanders (LL) and 46 Sherpa highlanders (SH) during the Xtreme Everest 2 expedition. Measurements were made at baseline (BL) (LL: London 35 m; SH: Kathmandu 1300 m) and at Everest base camp (LL and SH: EBC 5,300 m). We found that BF signal content increased with ascent to EBC in both SH and LL. At both altitudes, LZC of the BF signals was significantly higher in SH, and was related to local slow-wave flow-motion activity over multiple spatial and temporal scales. In SH, BF LZC was also positively associated with LZC of the simultaneously measured tissue oxygenation signals. These data provide robust mechanistic information of microvascular network functionality and flexibility during hypoxic exposure on ascent to high altitude. They demonstrate the importance of a sustained heterogeneity of network perfusion, associated with local vaso-control mechanisms, to effective tissue oxygenation during hypobaric hypoxia.
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He Q, Perera S, Khalifa Y, Zhang Z, Mahoney AS, Sabry A, Donohue C, Coyle JL, Sejdic E. The Association of High Resolution Cervical Auscultation Signal Features With Hyoid Bone Displacement During Swallowing. IEEE Trans Neural Syst Rehabil Eng 2019; 27:1810-1816. [PMID: 31443032 PMCID: PMC6746228 DOI: 10.1109/tnsre.2019.2935302] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
Recent publications have suggested that high-resolution cervical auscultation (HRCA) signals may provide an alternative non-invasive option for swallowing assessment. However, the relationship between hyoid bone displacement, a key component to safe swallowing, and HRCA signals is not thoroughly understood. Therefore, in this work we investigated the hypothesis that a strong relationship exists between hyoid displacement and HRCA signals. Videofuoroscopy data was collected for 129 swallows, simultaneously with vibratory/acoustic signals. Horizontal, vertical and hypotenuse displacements of the hyoid bone were measured through manual expert analysis of videofluoroscopy images. Our results showed that the vertical displacement of both the anterior and posterior landmarks of the hyoid bone was strongly associated with the Lempel-Ziv complexity of superior-inferior and anterior-posterior vibrations from HRCA signals. Horizontal and hypotenuse displacements of the posterior aspect of the hyoid bone were strongly associated with the standard deviation of swallowing sounds. Medial-Lateral vibrations and patient characteristics such as age, sex, and history of stroke were not significantly associated with the hyoid bone displacement. The results imply that some vibratory/acoustic features extracted from HRCA recordings can provide information about the magnitude and direction of hyoid bone displacement. These results provide additional support for using HRCA as a non-invasive tool to assess physiological aspects of swallowing such as the hyoid bone displacement.
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21
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Sex Differences in the Complexity of Healthy Older Adults' Magnetoencephalograms. ENTROPY 2019; 21:e21080798. [PMID: 33267511 PMCID: PMC7515326 DOI: 10.3390/e21080798] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/24/2019] [Revised: 08/12/2019] [Accepted: 08/13/2019] [Indexed: 01/22/2023]
Abstract
The analysis of resting-state brain activity recording in magnetoencephalograms (MEGs) with new algorithms of symbolic dynamics analysis could help obtain a deeper insight into the functioning of the brain and identify potential differences between males and females. Permutation Lempel-Ziv complexity (PLZC), a recently introduced non-linear signal processing algorithm based on symbolic dynamics, was used to evaluate the complexity of MEG signals in source space. PLZC was estimated in a broad band of frequencies (2–45 Hz), as well as in narrow bands (i.e., theta (4–8 Hz), alpha (8–12 Hz), low beta (12–20 Hz), high beta (20–30 Hz), and gamma (30–45 Hz)) in a sample of 98 healthy elderly subjects (49 males, 49 female) aged 65–80 (average age of 72.71 ± 4.22 for males and 72.67 ± 4.21 for females). PLZC was significantly higher for females than males in the high beta band at posterior brain regions including the precuneus, and the parietal and occipital cortices. Further statistical analyses showed that higher complexity values over highly overlapping regions than the ones mentioned above were associated with larger hippocampal volumes only in females. These results suggest that sex differences in healthy aging can be identified from the analysis of magnetoencephalograms with novel signal processing methods.
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22
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Silva E, Martin RR, Pomuceno JP, Mansilla R, Betancourt-Mar JA, Cocho G, Nieto-Villar JM. Dose and frequency in cancer therapy. Theoretical non-autonomous model of p53 network. BIOL RHYTHM RES 2019. [DOI: 10.1080/09291016.2018.1465697] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
Affiliation(s)
- E. Silva
- Department of Chemical-Physics, A. Alzola Group of Thermodynamics of Complex Systems of M.V. Lomonosov Chair, Faculty of Chemistry, University of Havana, Havana, Cuba
| | - R. R. Martin
- Department of Chemical-Physics, A. Alzola Group of Thermodynamics of Complex Systems of M.V. Lomonosov Chair, Faculty of Chemistry, University of Havana, Havana, Cuba
| | - J. P. Pomuceno
- Department of Chemical-Physics, A. Alzola Group of Thermodynamics of Complex Systems of M.V. Lomonosov Chair, Faculty of Chemistry, University of Havana, Havana, Cuba
| | - R. Mansilla
- Centro de Investigaciones Interdisciplinarias en Ciencias y Humanidades, UNAM, México City, México
| | | | - G. Cocho
- Instituto de Física de la UNAM, México City, México
| | - J. M. Nieto-Villar
- Department of Chemical-Physics, A. Alzola Group of Thermodynamics of Complex Systems of M.V. Lomonosov Chair, Faculty of Chemistry, University of Havana, Havana, Cuba
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Li X, Yang H, Yan J, Wang X, Li X, Yuan Y. Low-Intensity Pulsed Ultrasound Stimulation Modulates the Nonlinear Dynamics of Local Field Potentials in Temporal Lobe Epilepsy. Front Neurosci 2019; 13:287. [PMID: 31001072 PMCID: PMC6454000 DOI: 10.3389/fnins.2019.00287] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2018] [Accepted: 03/11/2019] [Indexed: 12/31/2022] Open
Abstract
Low-intensity pulsed ultrasound stimulation (LIPUS) can inhibit seizures associated with temporal lobe epilepsy (TLE), which is the most common epileptic syndrome in adults and accounts for more than half of the cases of intractable epilepsy. Electroencephalography (EEG) signal analysis is an important method for studying epilepsy. The nonlinear dynamics of epileptic EEG signals can be used as biomarkers for the prediction and diagnosis of epilepsy. However, how ultrasound modulates the nonlinear dynamic characteristics of EEG signals in TLE is still unclear. Here, we used low-intensity pulsed ultrasound to stimulate the CA3 region of kainite (KA)-induced TLE mice, simultaneously recorded local field potentials (LFP) in the stimulation regions before, during, and after LIPUS. The nonlinear characteristics, including complexity, approximate entropy of different frequency bands, and Lyapunov exponent of the LFP, were calculated. Compared with the control group, the experimental group showed that LIPUS inhibited TLE seizure and the complexity, approximate entropy of the delta (0.5–4 Hz) and theta (4–8 Hz) frequency bands, and Lyapunov exponent of the LFP significantly increased in response to ultrasound stimulation. The values before ultrasound stimulation were higher ∼1.87 (complexity), ∼1.39 (approximate entropy of delta frequency bands), ∼1.13 (approximate entropy of theta frequency bands) and ∼1.46 times (Lyapunov exponent) than that after ultrasound stimulation (p < 0.05). The above results demonstrated that LIPUS can alter nonlinear dynamic characteristics and provide a basis for the application of ultrasound stimulation in the treatment of epilepsy.
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Affiliation(s)
- Xin Li
- Institute of Electrical Engineering, Yanshan University, Qinhuangdao, China
| | - Huifang Yang
- Institute of Electrical Engineering, Yanshan University, Qinhuangdao, China
| | - Jiaqing Yan
- College of Electrical and Control Engineering, North China University of Technology, Beijing, China
| | - Xingran Wang
- Institute of Electrical Engineering, Yanshan University, Qinhuangdao, China
| | - Xiaoli Li
- State Key Laboratory of Cognitive Neuroscience, Beijing Normal University, Beijing, China
| | - Yi Yuan
- Institute of Electrical Engineering, Yanshan University, Qinhuangdao, China
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24
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VICNESH JAHMUNAH, HAGIWARA YUKI. ACCURATE DETECTION OF SEIZURE USING NONLINEAR PARAMETERS EXTRACTED FROM EEG SIGNALS. J MECH MED BIOL 2019. [DOI: 10.1142/s0219519419400049] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Electroencephalography (EEG) is the graphical recording of electrical activity along the scalp. The EEG signal monitors brain activity noninvasively with a high accuracy of milliseconds and provides valuable discernment about the brain’s state. It is also sensitive in detecting spikes in epilepsy. Computer-aided diagnosis (CAD) tools allow epilepsy to be diagnosed by evading invasive methods. This paper presents a novel CAD system for epilepsy using other linear features together with Hjorth’s nonlinear features such as mobility, complexity, activity and Kolmogorov complexity. The proposed method uses MATLAB software to extract the nonlinear features from the EEG data. The optimal features are selected using the statistical analysis, ANOVA (analysis of variance) test for classification. Once selected, they are fed into the decision tree (DT) for the classification of the different epileptic classes. The proposed method affirms that four nonlinear features, Kolmogorov complexity, singular value decomposition, mobility and permutation entropy are sufficient to provide the highest accuracy of 93%, sensitivity of 97%, specificity of 88% and positive predictive value (PPV) of 94%, with the DT classifier. The mean value is the highest in the ictal stage for the Kolmogorov complexity proving it to have the best variation. It also has the highest [Formula: see text]-value of 300.439 portraying it to be the best parameter that is favourable for the clinical diagnosis of epilepsy, when used together with the DT classifier, for a duration of 23.6[Formula: see text]s of EEG data.
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Affiliation(s)
- JAHMUNAH VICNESH
- Department of Electronics and Computer Engineering, Ngee Ann Polytechnic, Singapore
| | - YUKI HAGIWARA
- Department of Electronics and Computer Engineering, Ngee Ann Polytechnic, Singapore
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25
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Alexeenko V, Fraser JA, Dolgoborodov A, Bowen M, Huang CLH, Marr CM, Jeevaratnam K. The application of Lempel-Ziv and Titchener complexity analysis for equine telemetric electrocardiographic recordings. Sci Rep 2019; 9:2619. [PMID: 30796330 PMCID: PMC6385502 DOI: 10.1038/s41598-019-38935-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2018] [Accepted: 12/28/2018] [Indexed: 12/19/2022] Open
Abstract
The analysis of equine electrocardiographic (ECG) recordings is complicated by the absence of agreed abnormality classification criteria. We explore the applicability of several complexity analysis methods for characterization of non-linear aspects of electrocardiographic recordings. We here show that complexity estimates provided by Lempel-Ziv ’76, Titchener’s T-complexity and Lempel-Ziv ’78 analysis of ECG recordings of healthy Thoroughbred horses are highly dependent on the duration of analysed ECG fragments and the heart rate. The results provide a methodological basis and a feasible reference point for the complexity analysis of equine telemetric ECG recordings that might be applied to automate detection of equine arrhythmias in equine clinical practice.
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Affiliation(s)
- Vadim Alexeenko
- Faculty of Health and Medical Sciences, University of Surrey, Guildford, GU2 7AL, United Kingdom.,Physiological Laboratory, University of Cambridge, Cambridge, CB2 3DY, United Kingdom
| | - James A Fraser
- Physiological Laboratory, University of Cambridge, Cambridge, CB2 3DY, United Kingdom
| | | | - Mark Bowen
- Faculty of Medicine & Health Sciences, University of Nottingham, Nottingham, NG7 2UH, United Kingdom
| | - Christopher L-H Huang
- Physiological Laboratory, University of Cambridge, Cambridge, CB2 3DY, United Kingdom.,Division of Cardiovascular Biology, Department of Biochemistry, University of Cambridge, Cambridge, CB2 1QW, United Kingdom
| | - Celia M Marr
- Rossdales Equine Hospital and Diagnostic Centre, Exning, CB8 7NN, Suffolk, United Kingdom
| | - Kamalan Jeevaratnam
- Faculty of Health and Medical Sciences, University of Surrey, Guildford, GU2 7AL, United Kingdom. .,Physiological Laboratory, University of Cambridge, Cambridge, CB2 3DY, United Kingdom.
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26
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Virmani M, Nagaraj N. A novel perturbation based compression complexity measure for networks. Heliyon 2019; 5:e01181. [PMID: 30828654 PMCID: PMC6383034 DOI: 10.1016/j.heliyon.2019.e01181] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2018] [Revised: 07/15/2018] [Accepted: 01/24/2019] [Indexed: 11/23/2022] Open
Abstract
Measuring complexity of brain networks in the form of integrated information is a leading approach towards building a fundamental theory of consciousness. Integrated Information Theory (IIT) has gained attention in this regard due to its theoretically strong framework. Nevertheless, it faces some limitations such as current state dependence, computational intractability and inability to be applied to real brain data. On the other hand, Perturbational Complexity Index (PCI) is a clinical measure for distinguishing different levels of consciousness. Though PCI claims to capture the functional differentiation and integration in brain networks (similar to IIT), its link to integrated information is rather weak. Inspired by these two perspectives, we propose a new complexity measure for brain networks -Φ C using a novel perturbation based compression-complexity approach that serves as a bridge between the two, for the first time.Φ C is founded on the principles of lossless data compression based complexity measures which is computed by a perturbational approach.Φ C exhibits following salient innovations: (i) mathematically well bounded, (ii) negligible current state dependence unlike Φ, (iii) network complexity measured as compression-complexity rather than as an infotheoretic quantity, and (iv) lower computational complexity since number of atomic bipartitions scales linearly with the number of nodes of the network, thus avoiding combinatorial explosion. Our computations have revealed thatΦ C has similar hierarchy to <Φ> for several multiple-node networks and it demonstrates a rich interplay between differentiation, integration and entropy of the nodes of a network.Φ C is a promising heuristic measure to characterize network complexity (and hence might be useful in contributing to building a measure of consciousness) with potential applications in estimating brain complexity on neurophysiological data.
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Affiliation(s)
- Mohit Virmani
- Consciousness Studies Programme, National Institute of Advanced Studies, IISc Campus, Bengaluru, Karnataka, India
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27
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Rebrion C, Zhang Z, Khalifa Y, Ramadan M, Kurosu A, Coyle JL, Perera S, Sejdic E. High-Resolution Cervical Auscultation Signal Features Reflect Vertical and Horizontal Displacements of the Hyoid Bone During Swallowing. IEEE JOURNAL OF TRANSLATIONAL ENGINEERING IN HEALTH AND MEDICINE-JTEHM 2018; 7:1800109. [PMID: 30701145 PMCID: PMC6345415 DOI: 10.1109/jtehm.2018.2881468] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/01/2018] [Revised: 10/19/2018] [Accepted: 10/29/2018] [Indexed: 12/19/2022]
Abstract
Millions of people across the globe suffer from swallowing difficulties, known as dysphagia, which can lead to malnutrition, pneumonia, and even death. Swallowing cervical auscultation, which has been suggested as a noninvasive screening method for dysphagia, has not been associated yet with any physical events. In this paper, we have compared the hyoid bone displacement extracted from the videofluoroscopy images of 31 swallows to the signal features extracted from the cervical auscultation recordings captured with a tri-axial accelerometer and a microphone. First, the vertical displacement of the anterior part of the hyoid bone is related to the entropy rate of the superior–inferior swallowing vibrations and to the kurtosis of the swallowing sounds. Second, the vertical displacement of the posterior part of the hyoid bone is related to the bandwidth of the medial–lateral swallowing vibrations. Third, the horizontal displacements of the posterior and anterior parts of the hyoid bone are related to the spectral centroid of the superior–inferior swallowing vibrations and to the peak frequency of the medial–lateral swallowing vibrations, respectively. At last, the airway protection scores and the command characteristics were associated with the vertical and horizontal displacements, respectively, of the posterior part of the hyoid bone. Additional associations between the patients’ characteristics and auscultations’ signals were also observed. The hyoid bone maximal displacement is a cause of swallowing vibrations and sounds. High-resolution cervical auscultation may offer a noninvasive alternative for dysphagia screening and additional diagnostic information.
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Affiliation(s)
- Cedrine Rebrion
- Department of Electrical and Computer EngineeringSwanson School of EngineeringUniversity of PittsburghPittsburghPA15261USA
| | - Zhenwei Zhang
- Department of Electrical and Computer EngineeringSwanson School of EngineeringUniversity of PittsburghPittsburghPA15261USA
| | - Yassin Khalifa
- Department of Electrical and Computer EngineeringSwanson School of EngineeringUniversity of PittsburghPittsburghPA15261USA
| | - Mona Ramadan
- Department of Electrical and Computer EngineeringSwanson School of EngineeringUniversity of PittsburghPittsburghPA15261USA
| | - Atsuko Kurosu
- Department of the Communication Science and DisordersSchool of Health and Rehabilitation SciencesUniversity of PittsburghPittsburghPA15260USA
| | - James L Coyle
- Department of the Communication Science and DisordersSchool of Health and Rehabilitation SciencesUniversity of PittsburghPittsburghPA15260USA
| | - Subashan Perera
- Division of Geriatric MedicineDepartment of MedicineUniversity of PittsburghPittsburghPA15261USA
| | - Ervin Sejdic
- Department of Electrical and Computer EngineeringSwanson School of EngineeringUniversity of PittsburghPittsburghPA15261USA
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28
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Spatial and Temporal Non-Linear Dynamics Analysis and Predictability of Solar Radiation Time Series for La Reunion Island (France). ENTROPY 2018; 20:e20120946. [PMID: 33266670 PMCID: PMC7512557 DOI: 10.3390/e20120946] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/12/2018] [Revised: 11/30/2018] [Accepted: 12/06/2018] [Indexed: 11/16/2022]
Abstract
Analysis of daily solar irradiation variability and predictability in space and time is important for energy resources planning, development, and management. The natural intermittency of solar irradiation is mainly triggered by atmospheric turbulent conditions, radiative transfer, optical properties of cloud and aerosol, moisture and atmospheric stability, orographic and thermal forcing, which introduce additional complexity into the phenomenological records. To address this question for daily solar irradiation data recorded during the period 2011-2015, at 32 stations measuring solar irradiance on La Reunion French tropical Indian Ocean Island, we use the tools of non-linear dynamics: the intermittency and chaos analysis, the largest Lyapunov exponent, Sample entropy, the Kolmogorov complexity and its derivatives (Kolmogorov complexity spectrum and its highest value), and spatial weighted Kolmogorov complexity combined with Hamming distance to assess complexity and corresponding predictability. Finally, we have clustered the Kolmogorov time (that quantifies the time span beyond which randomness significantly influences predictability) for daily cumulative solar irradiation for all stations. We show that under the record-breaking 2011-2012 La Nina event and preceding a very strong El-Nino 2015-2016 event, the predictability of daily incident solar energy over La Réunion is affected.
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29
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Aydın S, Güdücü Ç, Kutluk F, Öniz A, Özgören M. The impact of musical experience on neural sound encoding performance. Neurosci Lett 2018; 694:124-128. [PMID: 30503922 DOI: 10.1016/j.neulet.2018.11.034] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2018] [Revised: 10/26/2018] [Accepted: 11/13/2018] [Indexed: 11/24/2022]
Abstract
In this study, 64-channel single trial auditory brain oscillations (STABO) have been firstly analyzed by using complexity metrics to observe the effect of musical experience on brain functions. Experimental data was recorded from eyes-opened volunteers during listening the musical chords by piano. Complexity estimation methods were compared to each other for classification of groups (professional musicians and non-musicians) by using both classifiers (support vector machine (SVM), Naive Bayes (NB)) and statistical tests (one-way ANOVA) with respect to electrode locations. Permutation entropy (PermEn) is found to be the best metric (p ≪ 0.0001, 98.37% and 98.41% accuracies for tonal and atonal ensembles) at fronto-temporal regions which are responsible for cognitive task evaluation and perception of sound. PermEn also provides the meaningful results at the whole cortex (p ≪ 0.0001, 99.81% accuracy for both tonal and atonal ensembles) through SVM with Radial Basis kernels superior to Gaussians. Almost the similar performance is also obtained for temporal features. Although, performance improvements are observed for spectral methods with NB, the considerable better results are obtained with SVM. The results indicate that musical stimuli cause pattern variations instead of spectral variations on STABO due to relatively higher neuronal activities around auditory cortex. In conclusion, temporal regions produce response to auditory stimuli, while frontal area integrates the auditory task at the same time. As well, the parietal cortex produces neural information according to the degree of attention generated by environmental changes such as atonal stimuli. It can be clearly stated that musical experience enhances the neural encoding performance of sound tonality at mostly fronto-temporal regions.
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Affiliation(s)
- Serap Aydın
- Department of Biophysics, Faculty of Medicine, University of Hacettepe, Ankara, Turkey
| | - Çağdaş Güdücü
- Department of Biophysics, Faculty of Medicine, University of Dokuz Eylül, Izmir, Turkey
| | - Fırat Kutluk
- Department of Musicology, Faculty of Fine Arts, University of Dokuz Eylül, Izmir, Turkey
| | - Adile Öniz
- Department of Biophysics, Faculty of Medicine, University of Dokuz Eylül, Izmir, Turkey
| | - Murat Özgören
- Department of Biophysics, Faculty of Medicine, University of Dokuz Eylül, Izmir, Turkey
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Analysis of Solar Irradiation Time Series Complexity and Predictability by Combining Kolmogorov Measures and Hamming Distance for La Reunion (France). ENTROPY 2018; 20:e20080570. [PMID: 33265658 PMCID: PMC7513096 DOI: 10.3390/e20080570] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/30/2018] [Revised: 07/28/2018] [Accepted: 07/30/2018] [Indexed: 11/16/2022]
Abstract
Analysis of daily solar irradiation variability and predictability in space and time is important for energy resources planning, development, and management. The natural variability of solar irradiation is being complicated by atmospheric conditions (in particular cloudiness) and orography, which introduce additional complexity into the phenomenological records. To address this question for daily solar irradiation data recorded during the years 2013, 2014 and 2015 at 11 stations measuring solar irradiance on La Reunion French tropical Indian Ocean Island, we use a set of novel quantitative tools: Kolmogorov complexity (KC) with its derivative associated measures and Hamming distance (HAM) and their combination to assess complexity and corresponding predictability. We find that all half-day (from sunrise to sunset) solar irradiation series exhibit high complexity. However, all of them can be classified into three groups strongly influenced by trade winds that circulate in a “flow around” regime: the windward side (trade winds slow down), the leeward side (diurnal thermally-induced circulations dominate) and the coast parallel to trade winds (winds are accelerated due to Venturi effect). We introduce Kolmogorov time (KT) that quantifies the time span beyond which randomness significantly influences predictability.
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Complexity Changes in Brain Activity in Healthy Ageing: A Permutation Lempel-Ziv Complexity Study of Magnetoencephalograms. ENTROPY 2018; 20:e20070506. [PMID: 33265596 PMCID: PMC7513026 DOI: 10.3390/e20070506] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/01/2018] [Revised: 06/26/2018] [Accepted: 06/28/2018] [Indexed: 12/17/2022]
Abstract
Maturation and ageing, which can be characterised by the dynamic changes in brain morphology, can have an impact on the physiology of the brain. As such, it is possible that these changes can have an impact on the magnetic activity of the brain recorded using magnetoencephalography. In this study changes in the resting state brain (magnetic) activity due to healthy ageing were investigated by estimating the complexity of magnetoencephalogram (MEG) signals. The main aim of this study was to identify if the complexity of background MEG signals changed significantly across the human lifespan for both males and females. A sample of 177 healthy participants (79 males and 98 females aged between 21 and 80 and grouped into 3 categories i.e., early-, mid- and late-adulthood) was used in this investigation. This investigation also extended to evaluating if complexity values remained relatively stable during the 5 min recording. Complexity was estimated using permutation Lempel-Ziv complexity, a recently introduced complexity metric, with a motif length of 5 and a lag of 1. Effects of age and gender were investigated in the MEG channels over 5 brain regions, i.e., anterior, central, left lateral, posterior, and, right lateral, with highest complexity values observed in the signals recorded by the channels over the anterior and central regions of the brain. Results showed that while changes due to age had a significant effect on the complexity of the MEG signals recorded over 5 brain regions, gender did not have a significant effect on complexity values in all age groups investigated. Moreover, although some changes in complexity were observed between the different minutes of recording, due to the small magnitude of the changes it was concluded that practical significance might outweigh statistical significance in this instance. The results from this study can contribute to form a fingerprint of the characteristics of healthy ageing in MEGs that could be useful when investigating changes to the resting state activity due to pathology.
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Complexity Analysis of Global Temperature Time Series. ENTROPY 2018; 20:e20060437. [PMID: 33265527 PMCID: PMC7512956 DOI: 10.3390/e20060437] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/26/2018] [Revised: 05/25/2018] [Accepted: 06/02/2018] [Indexed: 11/28/2022]
Abstract
Climate has complex dynamics due to the plethora of phenomena underlying its evolution. These characteristics pose challenges to conducting solid quantitative analysis and reaching assertive conclusions. In this paper, the global temperature time series (TTS) is viewed as a manifestation of the climate evolution, and its complexity is calculated by means of four different indices, namely the Lempel–Ziv complexity, sample entropy, signal harmonics power ratio, and fractal dimension. In the first phase, the monthly mean TTS is pre-processed by means of empirical mode decomposition, and the TTS trend is calculated. In the second phase, the complexity of the detrended signals is estimated. The four indices capture distinct features of the TTS dynamics in a 4-dim space. Hierarchical clustering is adopted for dimensional reduction and visualization in the 2-dim space. The results show that TTS complexity exhibits space-time variability, suggesting the presence of distinct climate forcing processes in both dimensions. Numerical examples with real-world data demonstrate the effectiveness of the approach.
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Classification of Targets and Distractors Present in Visual Hemifields Using Time-Frequency Domain EEG Features. JOURNAL OF HEALTHCARE ENGINEERING 2018; 2018:9213707. [PMID: 29808111 PMCID: PMC5902061 DOI: 10.1155/2018/9213707] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/29/2017] [Revised: 01/17/2018] [Accepted: 02/01/2018] [Indexed: 11/27/2022]
Abstract
This paper presents a classification system to classify the cognitive load corresponding to targets and distractors present in opposite visual hemifields. The approach includes the study of EEG (electroencephalogram) signal features acquired in a spatial attention task. The process comprises of EEG feature selection based on the feature distribution, followed by the stepwise discriminant analysis- (SDA-) based channel selection. Repeated measure analysis of variance (rANOVA) is applied to test the statistical significance of the selected features. Classifiers are developed and compared using the selected features to classify the target and distractor present in visual hemifields. The results provide a maximum classification accuracy of 87.2% and 86.1% and an average classification accuracy of 76.5 ± 4% and 76.2 ± 5.3% over the thirteen subjects corresponding to the two task conditions. These correlates present a step towards building a feature-based neurofeedback system for visual attention.
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Characterisation of the Effects of Sleep Deprivation on the Electroencephalogram Using Permutation Lempel–Ziv Complexity, a Non-Linear Analysis Tool. ENTROPY 2017. [DOI: 10.3390/e19120673] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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Mateos DM, Wennberg R, Guevara R, Perez Velazquez JL. Consciousness as a global property of brain dynamic activity. Phys Rev E 2017; 96:062410. [PMID: 29347348 DOI: 10.1103/physreve.96.062410] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2017] [Indexed: 06/07/2023]
Abstract
We seek general principles of the structure of the cellular collective activity associated with conscious awareness. Can we obtain evidence for features of the optimal brain organization that allows for adequate processing of stimuli and that may guide the emergence of cognition and consciousness? Analyzing brain recordings in conscious and unconscious states, we followed initially the classic approach in physics when it comes to understanding collective behaviours of systems composed of a myriad of units: the assessment of the number of possible configurations (microstates) that the system can adopt, for which we use a global entropic measure associated with the number of connected brain regions. Having found maximal entropy in conscious states, we then inspected the microscopic nature of the configurations of connections using an adequate complexity measure and found higher complexity in states characterized not only by conscious awareness but also by subconscious cognitive processing, such as sleep stages. Our observations indicate that conscious awareness is associated with maximal global (macroscopic) entropy and with the short time scale (microscopic) complexity of the configurations of connected brain networks in pathological unconscious states (seizures and coma), but the microscopic view captures the high complexity in physiological unconscious states (sleep) where there is information processing. As such, our results support the global nature of conscious awareness, as advocated by several theories of cognition. We thus hope that our studies represent preliminary steps to reveal aspects of the structure of cognition that leads to conscious awareness.
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Affiliation(s)
- D M Mateos
- Neuroscience and Mental Health Programme, Division of Neurology, Hospital for Sick Children, Institute of Medical Science and Department of Paediatrics, University of Toronto, Toronto, Canada
| | - R Wennberg
- Krembil Neuroscience Centre, Toronto Western Hospital, University of Toronto, Toronto, Canada
| | - R Guevara
- Laboratoire Psychologie de la Perception, CNRS and Université Paris Descartes, Sorbonne Paris Cité, Paris, France
| | - J L Perez Velazquez
- Neuroscience and Mental Health Programme, Division of Neurology, Hospital for Sick Children, Institute of Medical Science and Department of Paediatrics, University of Toronto, Toronto, Canada
- Ronin Institute, Montclair, New Jersey, USA
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Randomness Representation of Turbulence in Canopy Flows Using Kolmogorov Complexity Measures. ENTROPY 2017. [DOI: 10.3390/e19100519] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Abstract
The complexity of the climate of the past 122;000 years and recent 2000 years was investigated by analyzing the δ18O records of ice cores based on the sample entropy (SampEn) method and Lempel-Ziv (LZ) complexity. In using SampEn method, the climate complexity is measured by the sample entropy, which is a modified approximate entropy defined in terms of the occurring probability of new modes in a record. A larger sample entropy reflects a higher probability to spot a new mode in the data, and in this sense signals a larger complexity of the sample. The δ18O record of the past 122,000-year is found to have smaller SampEn than the recent 2000-year. This result suggests that the climate of the past 122;000-year has less complexity than that of the recent 2000 years, even though the record for the former exhibits stronger fluctuations and multifractality than the latter. This diagnosis is additionally supported by calculations of LZ complexity, which has smaller value for the record of the past 122;000 years than the recent 2000 years. Our theoretical findings may further contribute to ongoing explorations into the nonlinear statistical character of the climate change.
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Movahedi F, Kurosu A, Coyle JL, Perera S, Sejdić E. A comparison between swallowing sounds and vibrations in patients with dysphagia. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2017; 144:179-187. [PMID: 28495001 PMCID: PMC5455149 DOI: 10.1016/j.cmpb.2017.03.009] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2016] [Revised: 01/27/2017] [Accepted: 03/09/2017] [Indexed: 06/07/2023]
Abstract
The cervical auscultation refers to the observation and analysis of sounds or vibrations captured during swallowing using either a stethoscope or acoustic/vibratory detectors. Microphones and accelerometers have recently become two common sensors used in modern cervical auscultation methods. There are open questions about whether swallowing signals recorded by these two sensors provide unique or complementary information about swallowing function; or whether they present interchangeable information. This study aims to compare of swallowing signals recorded by a microphone and a tri-axial accelerometer from 72 patients (mean age 63.94 ± 12.58 years, 42 male, 30 female), who had videofluoroscopic examination. The participants swallowed one or more boluses of thickened liquids of different consistencies, including thin liquids, nectar-thick liquids, and pudding. A comfortable self-selected volume from a cup or a controlled volume by the examiner from a 5 ml spoon was given to the participants. A broad feature set was extracted in time, information-theoretic, and frequency domains from each of 881 swallows presented in this study. The swallowing sounds exhibited significantly higher frequency content and kurtosis values than the swallowing vibrations. In addition, the Lempel-Ziv complexity was lower for swallowing sounds than those for swallowing vibrations. To conclude, information provided by microphones and accelerometers about swallowing function are unique and these two transducers are not interchangeable. Consequently, the selection of transducer would be a vital step in future studies.
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Affiliation(s)
- Faezeh Movahedi
- Department of Electrical and Computer Engineering, Swanson School of Enginering, University of Pittsburgh, Pittsburgh, PA, USA
| | - Atsuko Kurosu
- Department of Communication Science and Disorders, School of Health and Rehabilitation Sciences, University of Pittsburgh, Pittsburgh, PA, USA
| | - James L Coyle
- Department of Communication Science and Disorders, School of Health and Rehabilitation Sciences, University of Pittsburgh, Pittsburgh, PA, USA
| | - Subashan Perera
- Department of Medicine, Division of Geriatric Medicine, University of Pittsburgh, Pittsburgh, PA, USA
| | - Ervin Sejdić
- Department of Electrical and Computer Engineering, Swanson School of Enginering, University of Pittsburgh, Pittsburgh, PA, USA.
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Balasubramanian K, Nagaraj N. Aging and cardiovascular complexity: effect of the length of RR tachograms. PeerJ 2016; 4:e2755. [PMID: 27957395 PMCID: PMC5144723 DOI: 10.7717/peerj.2755] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2016] [Accepted: 11/04/2016] [Indexed: 01/08/2023] Open
Abstract
As we age, our hearts undergo changes that result in a reduction in complexity of physiological interactions between different control mechanisms. This results in a potential risk of cardiovascular diseases which are the number one cause of death globally. Since cardiac signals are nonstationary and nonlinear in nature, complexity measures are better suited to handle such data. In this study, three complexity measures are used, namely Lempel-Ziv complexity (LZ), Sample Entropy (SampEn) and Effort-To-Compress (ETC). We determined the minimum length of RR tachogram required for characterizing complexity of healthy young and healthy old hearts. All the three measures indicated significantly lower complexity values for older subjects than younger ones. However, the minimum length of heart-beat interval data needed differs for the three measures, with LZ and ETC needing as low as 10 samples, whereas SampEn requires at least 80 samples. Our study indicates that complexity measures such as LZ and ETC are good candidates for the analysis of cardiovascular dynamics since they are able to work with very short RR tachograms.
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Affiliation(s)
- Karthi Balasubramanian
- Department of Electronics and Communication Engineering, Amrita School of Engineering, Coimbatore, Amrita Vishwa Vidyapeetham, Amrita University, India
| | - Nithin Nagaraj
- Consciousness Studies Programme, National Institute of Advanced Studies, Bengaluru, Karnataka, India
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40
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Zhang Y, Wei S, Di Maria C, Liu C. Using Lempel-Ziv Complexity to Assess ECG Signal Quality. J Med Biol Eng 2016; 36:625-634. [PMID: 27853413 PMCID: PMC5083778 DOI: 10.1007/s40846-016-0165-5] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2015] [Accepted: 02/02/2016] [Indexed: 11/30/2022]
Abstract
The poor quality of wireless electrocardiography (ECG) recordings can lead to misdiagnosis and waste of medical resources. This study presents an interpretation of Lempel–Ziv (LZ) complexity in terms of ECG quality assessment, and verifies its performance on real ECG signals. Firstly, LZ complexities for typical signals, namely high-frequency (HF) noise, low-frequency (LF) noise, power-line (PL) noise, impulse (IM) noise, clean artificial ECG signals, and ECG signals with various types of noise added (ECG plus HF, LF, PL, and IM noise, respectively) were analyzed. Then, the effects of noise, signal length, and signal-to-noise ratio (SNR) on the LZ complexity of ECG signals were analyzed. The simulation results show that LZ complexity for HF noise was obviously different from those for PL and LF noise. The LZ value can be used to determine the presence of HF noise. ECG plus HF noise had the highest LZ values. Other types of noise had low LZ values. Signal lengths of over 40 s had only a small effect on LZ values. The LZ values for ECG plus all types of noise increased monotonically with decreasing SNR except for LF and PL noise. For the test of real ECG signals plus three types of noise, namely muscle artefacts (MAs), baseline wander (BW), and electrode motion (EM) artefacts, LZ complexity varied obviously with increasing MA but not for BW and EM noise. This study demonstrates that LZ complexity is sensitive to noise level (especially for HF noise) and can thus be a valuable reference index for the assessment of ECG signal quality.
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Affiliation(s)
- Yatao Zhang
- School of Control Science and Engineering, Shandong University, Jinan, 250061 People's Republic of China ; School of Mechanical, Electrical & Information Engineering, Shandong University, Weihai, 264209 People's Republic of China
| | - Shoushui Wei
- School of Control Science and Engineering, Shandong University, Jinan, 250061 People's Republic of China
| | - Costanzo Di Maria
- Institute of Cellular Medicine, Newcastle University, Newcastle upon Tyne, NE1 4LP UK ; Regional Medical Physics Department, Freeman Hospital, Newcastle upon Tyne, NE7 7DN UK
| | - Chengyu Liu
- School of Control Science and Engineering, Shandong University, Jinan, 250061 People's Republic of China ; Institute of Cellular Medicine, Newcastle University, Newcastle upon Tyne, NE1 4LP UK
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Zhang Y, Wei S, Liu H, Zhao L, Liu C. A novel encoding Lempel-Ziv complexity algorithm for quantifying the irregularity of physiological time series. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2016; 133:7-15. [PMID: 27393795 DOI: 10.1016/j.cmpb.2016.05.010] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2015] [Revised: 04/21/2016] [Accepted: 05/19/2016] [Indexed: 06/06/2023]
Abstract
BACKGROUND AND OBJECTIVE The Lempel-Ziv (LZ) complexity and its variants have been extensively used to analyze the irregularity of physiological time series. To date, these measures cannot explicitly discern between the irregularity and the chaotic characteristics of physiological time series. Our study compared the performance of an encoding LZ (ELZ) complexity algorithm, a novel variant of the LZ complexity algorithm, with those of the classic LZ (CLZ) and multistate LZ (MLZ) complexity algorithms. METHODS AND RESULTS Simulation experiments on Gaussian noise, logistic chaotic, and periodic time series showed that only the ELZ algorithm monotonically declined with the reduction in irregularity in time series, whereas the CLZ and MLZ approaches yielded overlapped values for chaotic time series and time series mixed with Gaussian noise, demonstrating the accuracy of the proposed ELZ algorithm in capturing the irregularity, rather than the complexity, of physiological time series. In addition, the effect of sequence length on the ELZ algorithm was more stable compared with those on CLZ and MLZ, especially when the sequence length was longer than 300. A sensitivity analysis for all three LZ algorithms revealed that both the MLZ and the ELZ algorithms could respond to the change in time sequences, whereas the CLZ approach could not. Cardiac interbeat (RR) interval time series from the MIT-BIH database were also evaluated, and the results showed that the ELZ algorithm could accurately measure the inherent irregularity of the RR interval time series, as indicated by lower LZ values yielded from a congestive heart failure group versus those yielded from a normal sinus rhythm group (p < 0.01).
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Affiliation(s)
- Yatao Zhang
- School of Control Science and Engineering, Shandong University, Jinan 250061, China; School of Mechanical, Electrical & Information Engineering, Shandong University, Weihai 264209, China
| | - Shoushui Wei
- School of Control Science and Engineering, Shandong University, Jinan 250061, China.
| | - Hai Liu
- School of Mechanical, Electrical & Information Engineering, Shandong University, Weihai 264209, China
| | - Lina Zhao
- School of Control Science and Engineering, Shandong University, Jinan 250061, China
| | - Chengyu Liu
- School of Control Science and Engineering, Shandong University, Jinan 250061, China.
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Moufawad El Achkar C, Lenoble-Hoskovec C, Paraschiv-Ionescu A, Major K, Büla C, Aminian K. Physical Behavior in Older Persons during Daily Life: Insights from Instrumented Shoes. SENSORS 2016; 16:s16081225. [PMID: 27527172 PMCID: PMC5017390 DOI: 10.3390/s16081225] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/10/2016] [Revised: 06/23/2016] [Accepted: 07/11/2016] [Indexed: 12/30/2022]
Abstract
Activity level and gait parameters during daily life are important indicators for clinicians because they can provide critical insights into modifications of mobility and function over time. Wearable activity monitoring has been gaining momentum in daily life health assessment. Consequently, this study seeks to validate an algorithm for the classification of daily life activities and to provide a detailed gait analysis in older adults. A system consisting of an inertial sensor combined with a pressure sensing insole has been developed. Using an algorithm that we previously validated during a semi structured protocol, activities in 10 healthy elderly participants were recorded and compared to a wearable reference system over a 4 h recording period at home. Detailed gait parameters were calculated from inertial sensors. Dynamics of physical behavior were characterized using barcodes that express the measure of behavioral complexity. Activity classification based on the algorithm led to a 93% accuracy in classifying basic activities of daily life, i.e., sitting, standing, and walking. Gait analysis emphasizes the importance of metrics such as foot clearance in daily life assessment. Results also underline that measures of physical behavior and gait performance are complementary, especially since gait parameters were not correlated to complexity. Participants gave positive feedback regarding the use of the instrumented shoes. These results extend previous observations in showing the concurrent validity of the instrumented shoes compared to a body-worn reference system for daily-life physical behavior monitoring in older adults.
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Affiliation(s)
- Christopher Moufawad El Achkar
- Laboratory of Movement Analysis and Measurement, Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015 Lausanne, Switzerland.
| | - Constanze Lenoble-Hoskovec
- Centre Hospitalier Universitaire Vaudois (CHUV), Service de gériatrie et réadaptation gériatrique, 1011 Lausanne, Switzerland.
| | - Anisoara Paraschiv-Ionescu
- Laboratory of Movement Analysis and Measurement, Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015 Lausanne, Switzerland.
| | - Kristof Major
- Centre Hospitalier Universitaire Vaudois (CHUV), Service de gériatrie et réadaptation gériatrique, 1011 Lausanne, Switzerland.
| | - Christophe Büla
- Centre Hospitalier Universitaire Vaudois (CHUV), Service de gériatrie et réadaptation gériatrique, 1011 Lausanne, Switzerland.
| | - Kamiar Aminian
- Laboratory of Movement Analysis and Measurement, Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015 Lausanne, Switzerland.
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Sun C, Chen R, Tian M, An X, Qi H, Xu M, Wang X, Ming D, Zhou P. Research on EEG features of attended & unattended vigilance. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2016; 2016:4662-4665. [PMID: 28325011 DOI: 10.1109/embc.2016.7591767] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Vigilance refers to the brain alertness to objective things, including the concentration of attention and the capability to response emergencies. It is of great importance to study vigilance monitoring to avoid accidents caused by decrease of vigilance. In this study, traditional Mackworth Clock Test (MCT) was modified to induce decline of attended and unattended vigilance. We analyzed EEG features in different levels of attended vigilance and assessed unattended vigilance by amplitude of mismatch negative (MMN) which can be evoked by audio odd ball stimulations. The results show that with attended vigilance going down, power of theta and alpha bands of electroencephalogram (EEG) increases and Lempel-Ziv Complexities (LZC) show an undulated decline tendency. And with unattended vigilance going down, amplitude of MMN reduces significantly. This research has great reference value for the further vigilance study.
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Artan NS. EEG analysis via multiscale Lempel-Ziv complexity for seizure detection. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2016; 2016:4535-4538. [PMID: 28269285 DOI: 10.1109/embc.2016.7591736] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Robust seizure detection and seizure prediction continues to be a challenge. Lempel-Ziv Complexity (LZC) is one of the features that has shown to be relevant in seizure detection. Recent work has shown that augmenting LZC can be beneficial to emphasize variations in amplitude or frequency when analyzing biomedical signals. In this paper, we present a first look into evaluating the feasibility of using a recently proposed feature stemmed from LZC, namely the Multiscale Lempel-Ziv Complexity (MLZC) for seizure detection. MLZC does not allow the high-frequency signal components to be overwhelmed by the low frequency signal components when calculating complexity values. We compare MLZC and LZC for identifying seizures for three cases and show MLZC can provide a clear separation between non-ictal and ictal periods for all three cases using a single threshold over 7 recordings and 7 seizures per patient, whereas LZC provided such a clear separation for only one of the patients.
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Movahedi F, Kurosu A, Coyle JL, Perera S, Sejdic E. Anatomical Directional Dissimilarities in Tri-axial Swallowing Accelerometry Signals. IEEE Trans Neural Syst Rehabil Eng 2016; 25:447-458. [PMID: 27295677 DOI: 10.1109/tnsre.2016.2577882] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
Swallowing accelerometry is a noninvasive approach currently under consideration as an instrumental screening test for swallowing difficulties, with most current studies focusing on the swallowing vibrations in the anterior-posterior (A-P) and superior-inferior (S-I) directions. However, the displacement of the hyolaryngeal structure during the act of swallowing in patients with dysphagia involves declination of the medial-lateral (M-L), which suggests that the swallowing vibrations in the M-L direction have the ability to reveal additional details about the swallowing function. With this motivation, we performed a broad comparison of the swallowing vibrations in all three anatomical directions. Tri-axial swallowing accelerometry signals were concurrently collected from 72 dysphagic patients undergoing videofluoroscopic evaluation of swallowing (mean age: 63.94 ± 12.58 years period). Participants swallowed one or more thickened liquids with different consistencies including thin-thick liquids, nectar-thick liquids, and pudding-thick liquids with either a comfortable self-selected volume from a cup or a controlled volume by the examiner from a 5-ml spoon. Swallows were grouped based on the viscosity of swallows and the participant's stroke history. Then, a comprehensive set of features was extracted in multiple signal domains from 881 swallows. The results highlighted inter-axis dissimilarities among tri-axial swallowing vibrations including the extent of variability in the amplitude of signals, the degree of predictability of signals, and the extent of disordered behavior of signals in time-frequency domain. First, the upward movement of the hyolaryngeal structure, representing the S-I signals, were actually more variable in amplitude and showed less predictable behavior than the sideways and forward movements, representing the A-P and M-L signals, during swallowing. Second, the S-I signals, which represent the upward movement of the hyolaryngeal structure, behaved more disordered in the time-frequency domain than the sideways movement, M-L signals, in all groups of study except for the pudding swallows in the stroke group. Third, considering the viscosity and the participant's pathology, thin liquid swallows in the nonstroke group presented the most directional differences among all groups of study. In summary, despite some directional dissimilarities, M-L axis accelerometry characteristics are similar to those of the two other axes. This indicates that M-L axis characteristics, which cannot be observed in videofluoroscopic images, can be adequately derived from the A-P and S-I axes.
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Bleton H, Perera S, Sejdić E. Cognitive tasks and cerebral blood flow through anterior cerebral arteries: a study via functional transcranial Doppler ultrasound recordings. BMC Med Imaging 2016; 16:22. [PMID: 26969112 PMCID: PMC4788871 DOI: 10.1186/s12880-016-0125-0] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2015] [Accepted: 02/29/2016] [Indexed: 01/12/2023] Open
Abstract
Background Functional transcanial Doppler ultrasound (fTCD) is a convenient approach to examine cerebral blood flow velocity (CBFV) in major cerebral arteries. Methods In this study, the anterior cerebral artery (ACA) was insonated on both sides, that is, right ACA (R-ACA) and left ACA (L-ACA). The envelope signals (the maximum velocity) and the raw signals were analyzed during cognitive processes, i.e. word-generation tasks, geometric tasks and resting state periods separating each task. Data which were collected from 20 healthy participants were used to investigate the changes and the hemispheric functioning while performing cognitive tasks. Signal characteristics were analyzed in time domain, frequency domain and time-frequency domain. Results Significant results have been obtained through the use of both classic/modern methods (i.e. envelope/raw, time and frequency/information-theoretic and time-frequency domains). The frequency features extracted from the raw signals highlighted sex effects on cerebral blood flow which revealed distinct brain response during each process and during resting periods. In the time-frequency analysis, the distribution of wavelet energies on the envelope signals moved around the low frequencies during mental processes and did not experience any lateralization during cognitive tasks. Conclusions Even if no lateralization effects were noticed during resting-state, verbal and geometric tasks, understanding CBFV in ACA during cognitive tasks could complement information extracted from cerebral blood flow in middle cerebral arteries during similar cognitive tasks (i.e. sex effects).
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Affiliation(s)
- Héloïse Bleton
- Department of Electrical and Computer Engineering, University of Pittsburgh, Pittsburgh, PA, USA
| | - Subashan Perera
- Division of Geriatric Medicine, University of Pittsburgh, Pittsburgh, PA, USA
| | - Ervin Sejdić
- Department of Electrical and Computer Engineering, University of Pittsburgh, Pittsburgh, PA, USA.
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Skandari R, Le Bihan N, Manton JH. C. elegans locomotion analysis using algorithmic information theory. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2016; 2015:6485-8. [PMID: 26737778 DOI: 10.1109/embc.2015.7319878] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
This article investigates the use of algorithmic information theory to analyse C. elegans datasets. The ability of complexity measures to detect similarity in animals' behaviours is demonstrated and their strengths are compared to methods such as histograms. Introduced quantities are illustrated on a couple of real two-dimensional C. elegans datasets to investigate the thermotaxis and chemotaxis behaviours.
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Cabiddu R, Trimer R, Monteiro CI, Borghi-Silva A, Trimer V, Carvalho P, Rocha T, Paredes S, Bianchi AM, Henriques J. Correlation between autonomous function and left ventricular performance after acute myocardial infarction. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2016; 2015:3343-6. [PMID: 26737008 DOI: 10.1109/embc.2015.7319108] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
Reduced ejection fraction (EF), possibly induced/mediated by autonomic abnormal activation, is one of the most powerful predictors of adverse outcome after acute myocardial infarction (MI). A deep understanding of the correlation between the autonomous functionality and the left ventricular performance in these patients is therefore of paramount importance. The autonomous function is reflected in the cardiac activity and, specifically, in the heart rate variability (HRV) signal. Given the cardiac activity nonlinearity, growing interest is being manifested towards nonlinear methods of analysis, which might provide more significant information than the traditional linear approaches. The aim of the present study was to investigate if non-linear HRV metrics change between MI patients with preserved EF (pEF) and MI patients with reduced EF (rEF). Data were acquired in the context of the cardioRisk project. Ten MI patients with rEF and six MI patients with pEF, admitted to Intensive Cardiac Care after a first acute MI episode, were studied. The ECG was acquired during a Holter recording and the tachogram was extracted. Sample entropy (SE) and Lempel-Ziv Complexity (LZC 1 and LZC 2) metrics were computed on five hour long tachogram portions. A significant correlation was found between LZC indices and EF in the whole population; SE, LZC 1 and LZC 2 were significantly higher in patients with pEF. Our results indicate that lower complexity characterizes the HRV of MI patients with rEF. Complexity reduction might be due to a simplification of regulatory mechanisms, which might explain why MI patients with rEF are at higher risk for subsequent non-fatal and fatal events.
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Zarafshan H, Khaleghi A, Mohammadi MR, Moeini M, Malmir N. Electroencephalogram complexity analysis in children with attention-deficit/hyperactivity disorder during a visual cognitive task. J Clin Exp Neuropsychol 2015; 38:361-9. [PMID: 26678277 DOI: 10.1080/13803395.2015.1119252] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Abstract
OBJECTIVE The aim of this study was to investigate electroencephalogram (EEG) dynamics using complexity analysis in children with attention-deficit/hyperactivity disorder (ADHD) compared with healthy control children when performing a cognitive task. METHOD Thirty 7-12-year-old children meeting Diagnostic and Statistical Manual of Mental Disorders-Fifth Edition (DSM-5) criteria for ADHD and 30 healthy control children underwent an EEG evaluation during a cognitive task, and Lempel-Ziv complexity (LZC) values were computed. There were no significant differences between ADHD and control groups on age and gender. RESULTS The mean LZC of the ADHD children was significantly larger than healthy children over the right anterior and right posterior regions during the cognitive performance. In the ADHD group, complexity of the right hemisphere was higher than that of the left hemisphere, but the complexity of the left hemisphere was higher than that of the right hemisphere in the normal group. CONCLUSION Although fronto-striatal dysfunction is considered conclusive evidence for the pathophysiology of ADHD, our arithmetic mental task has provided evidence of structural and functional changes in the posterior regions and probably cerebellum in ADHD.
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Affiliation(s)
- Hadi Zarafshan
- a Psychiatry & Psychology Research Center , Tehran University of Medical Sciences , Tehran , Iran
| | - Ali Khaleghi
- a Psychiatry & Psychology Research Center , Tehran University of Medical Sciences , Tehran , Iran.,b Department of Biomedical Engineering , Science and Research Branch, Islamic Azad University , Tehran , Iran
| | - Mohammad Reza Mohammadi
- a Psychiatry & Psychology Research Center , Tehran University of Medical Sciences , Tehran , Iran
| | - Mahdi Moeini
- a Psychiatry & Psychology Research Center , Tehran University of Medical Sciences , Tehran , Iran
| | - Nastaran Malmir
- a Psychiatry & Psychology Research Center , Tehran University of Medical Sciences , Tehran , Iran
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The psychosis-like effects of Δ(9)-tetrahydrocannabinol are associated with increased cortical noise in healthy humans. Biol Psychiatry 2015; 78:805-13. [PMID: 25913109 PMCID: PMC4627857 DOI: 10.1016/j.biopsych.2015.03.023] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/04/2014] [Revised: 03/06/2015] [Accepted: 03/20/2015] [Indexed: 11/20/2022]
Abstract
BACKGROUND Drugs that induce psychosis may do so by increasing the level of task-irrelevant random neural activity or neural noise. Increased levels of neural noise have been demonstrated in psychotic disorders. We tested the hypothesis that neural noise could also be involved in the psychotomimetic effects of delta-9-tetrahydrocannabinol (Δ(9)-THC), the principal active constituent of cannabis. METHODS Neural noise was indexed by measuring the level of randomness in the electroencephalogram during the prestimulus baseline period of an oddball task using Lempel-Ziv complexity, a nonlinear measure of signal randomness. The acute, dose-related effects of Δ(9)-THC on Lempel-Ziv complexity and signal power were studied in humans (n = 24) who completed 3 test days during which they received intravenous Δ(9)-THC (placebo, .015 and .03 mg/kg) in a double-blind, randomized, crossover, and counterbalanced design. RESULTS Δ(9)-THC increased neural noise in a dose-related manner. Furthermore, there was a strong positive relationship between neural noise and the psychosis-like positive and disorganization symptoms induced by Δ(9)-THC, which was independent of total signal power. Instead, there was no relationship between noise and negative-like symptoms. In addition, Δ(9)-THC reduced total signal power during both active drug conditions compared with placebo, but no relationship was detected between signal power and psychosis-like symptoms. CONCLUSIONS At doses that produced psychosis-like effects, Δ(9)-THC increased neural noise in humans in a dose-dependent manner. Furthermore, increases in neural noise were related with increases in Δ(9)-THC-induced psychosis-like symptoms but not negative-like symptoms. These findings suggest that increases in neural noise may contribute to the psychotomimetic effects of Δ(9)-THC.
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