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Sun C, Bauer CC, Hou J, Wright SM. Wideband receive-coil array design using high-impedance amplifiers for broadband decoupling. Magn Reson Med 2023; 90:2198-2210. [PMID: 37382188 DOI: 10.1002/mrm.29755] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2023] [Revised: 04/17/2023] [Accepted: 05/21/2023] [Indexed: 06/30/2023]
Abstract
PURPOSE Multinuclear MRI/S is of increasing interest. Currently, most multinuclear receive array coils are constructed by nesting multiple single-tuned array coils or using switching elements to control the operating frequency, in which case more than one set of conventional isolation preamplifiers and associated decoupling circuits is required. These conventional configurations rapidly become complicated when greater numbers of channels or nuclei are needed. In this work, a novel coil decoupling mechanism is proposed to enable broadband decoupling for array coils with one set of preamplifiers. METHODS Instead of using conventional isolation preamplifiers, a high-input impedance preamplifier is proposed to create broadband decoupling of the array elements. A matching network consisting of a single inductor-capacitor-capacitor multi-tuned network and a wire-wound transformer was used to interface the surface coil to the high-impedance preamplifier. To validate the concept, the proposed configuration was compared to the conventional preamplifier decoupling configuration on both bench and scanner. RESULTS 2 The approach can provide more than 15dB decoupling over a range of 25MHz, covering the Larmor frequencies of 23 Na and 2 H at 4.7T. This multi-tuned prototype obtained 61% and 76% of the imaging SNR at 2 H and 23 Na respectively, 76 and 89% in a higher loading test phantom, when compared to the conventional single-tuned preamplifier decoupling configuration. CONCLUSION With the multinuclear array operation and decoupling achieved using only one layer of array coil and preamplifiers, this work provides a simple approach of building high element-count arrays to enable accelerated imaging or SNR improvement from multiple nuclei.
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Affiliation(s)
- Chenhao Sun
- Department of Electrical and Computer Engineering, Texas A&M University, College Station, Texas, USA
- Department of Radiology and Biomedical Imaging, Yale University, New Haven, Connecticut, USA
| | - Courtney C Bauer
- Department of Electrical and Computer Engineering, Texas A&M University, College Station, Texas, USA
| | - Jue Hou
- Department of Electrical and Computer Engineering, Texas A&M University, College Station, Texas, USA
| | - Steven M Wright
- Department of Electrical and Computer Engineering, Texas A&M University, College Station, Texas, USA
- Department of Biomedical Engineering, Texas A&M University, College Station, Texas, USA
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2
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Lopez Kolkovsky AL, Carlier PG, Marty B, Meyerspeer M. Interleaved and simultaneous multi-nuclear magnetic resonance in vivo. Review of principles, applications and potential. NMR IN BIOMEDICINE 2022; 35:e4735. [PMID: 35352440 PMCID: PMC9542607 DOI: 10.1002/nbm.4735] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/07/2021] [Revised: 03/03/2022] [Accepted: 03/28/2022] [Indexed: 06/14/2023]
Abstract
Magnetic resonance signals from different nuclei can be excited or received at the same time,rendering simultaneous or rapidly interleaved multi-nuclear acquisitions feasible. The advan-tages are a reduction of total scan time compared to sequential multi-nuclear acquisitions or that additional information from heteronuclear data is obtained at thesame time and anatomical position. Information content can be qualitatively increased by delivering a more comprehensive MR-based picture of a transient state (such as an exercise bout). Also, combiningnon-proton MR acquisitions with 1 Hinformation (e.g., dynamic shim updates and motion correction) can be used to improve data quality during long scans and benefits image coregistration. This work reviews the literature on interleaved and simultaneous multi-nuclear MRI and MRS in vivo. Prominent use cases for this methodology in clinical and research applications are brain and muscle, but studies have also been carried out in other targets, including the lung, knee, breast and heart. Simultaneous multi-nuclear measurements in the liver and kidney have also been performed, but exclusively in rodents. In this review, a consistent nomenclature is proposed, to help clarify the terminology used for this principle throughout the literature on in-vivo MR. An overview covers the basic principles, the technical requirements on the MR scanner and the implementations realised either by MR system vendors or research groups, from the early days until today. Considerations regarding the multi-tuned RF coils required and heteronuclear polarisation interactions are briefly discussed, and fields for future in-vivo applications for interleaved multi-nuclear MR pulse sequences are identified.
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Affiliation(s)
- Alfredo L. Lopez Kolkovsky
- NMR Laboratory, Neuromuscular Investigation CenterInstitute of MyologyParisFrance
- NMR laboratoryCEA, DRF, IBFJParisFrance
| | - Pierre G. Carlier
- NMR Laboratory, Neuromuscular Investigation CenterInstitute of MyologyParisFrance
- NMR laboratoryCEA, DRF, IBFJParisFrance
| | - Benjamin Marty
- NMR Laboratory, Neuromuscular Investigation CenterInstitute of MyologyParisFrance
- NMR laboratoryCEA, DRF, IBFJParisFrance
| | - Martin Meyerspeer
- High‐Field MR Center, Center for Medical Physics and Biomedical EngineeringMedical University of ViennaViennaAustria
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Larson PEZ, Gordon JW. Hyperpolarized Metabolic MRI-Acquisition, Reconstruction, and Analysis Methods. Metabolites 2021; 11:386. [PMID: 34198574 PMCID: PMC8231874 DOI: 10.3390/metabo11060386] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2021] [Revised: 06/05/2021] [Accepted: 06/08/2021] [Indexed: 01/05/2023] Open
Abstract
Hyperpolarized metabolic MRI with 13C-labeled agents has emerged as a powerful technique for in vivo assessments of real-time metabolism that can be used across scales of cells, tissue slices, animal models, and human subjects. Hyperpolarized contrast agents have unique properties compared to conventional MRI scanning and MRI contrast agents that require specialized imaging methods. Hyperpolarized contrast agents have a limited amount of available signal, irreversible decay back to thermal equilibrium, bolus injection and perfusion kinetics, cellular uptake and metabolic conversion kinetics, and frequency shifts between metabolites. This article describes state-of-the-art methods for hyperpolarized metabolic MRI, summarizing data acquisition, reconstruction, and analysis methods in order to guide the design and execution of studies.
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Affiliation(s)
- Peder Eric Zufall Larson
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94143, USA;
- UC Berkeley-UCSF Graduate Program in Bioengineering, University of California, San Francisco, CA 94143, USA
- UC Berkeley-UCSF Graduate Program in Bioengineering, University of California, Berkeley, CA 94143, USA
| | - Jeremy W. Gordon
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94143, USA;
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Autry AW, Gordon JW, Chen HY, LaFontaine M, Bok R, Van Criekinge M, Slater JB, Carvajal L, Villanueva-Meyer JE, Chang SM, Clarke JL, Lupo JM, Xu D, Larson PEZ, Vigneron DB, Li Y. Characterization of serial hyperpolarized 13C metabolic imaging in patients with glioma. NEUROIMAGE-CLINICAL 2020; 27:102323. [PMID: 32623139 PMCID: PMC7334458 DOI: 10.1016/j.nicl.2020.102323] [Citation(s) in RCA: 39] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/28/2020] [Revised: 06/15/2020] [Accepted: 06/21/2020] [Indexed: 01/07/2023]
Abstract
Serial HP 13C MRI was evaluated for data consistency and abnormal metabolism. Metabolism of [1-13C]pyruvate to lactate and bicarbonate was kinetically modeled. Conversion rates within NAWM were consistent in healthy volunteer and patient scans Progressed tumor lesions showed higher relative conversion rates to [1-13C]lactate. Globally elevated rate constants were observed with anti-angiogenic treatment.
Background Hyperpolarized carbon-13 (HP-13C) MRI is a non-invasive imaging technique for probing brain metabolism, which may improve clinical cancer surveillance. This work aimed to characterize the consistency of serial HP-13C imaging in patients undergoing treatment for brain tumors and determine whether there is evidence of aberrant metabolism in the tumor lesion compared to normal-appearing tissue. Methods Serial dynamic HP [1-13C]pyruvate MRI was performed on 3 healthy volunteers (6 total examinations) and 5 patients (21 total examinations) with diffuse infiltrating glioma during their course of treatment, using a frequency-selective echo-planar imaging (EPI) sequence. HP-13C imaging at routine clinical timepoints overlapped treatment, including radiotherapy (RT), temozolomide (TMZ) chemotherapy, and anti-angiogenic/investigational agents. Apparent rate constants for [1-13C]pyruvate conversion to [1-13C]lactate (kPL) and [13C]bicarbonate (kPB) were simultaneously quantified based on an inputless kinetic model within normal-appearing white matter (NAWM) and anatomic lesions defined from 1H MRI. The inter/intra-subject consistency of kPL-NAWM and kPB-NAWM was measured in terms of the coefficient of variation (CV). Results When excluding scans following anti-angiogenic therapy, patient values of kPL-NAWM and kPB-NAWM were 0.020 s−1 ± 23.8% and 0.0058 s−1 ± 27.7% (mean ± CV) across 17 HP-13C MRIs, with intra-patient serial kPL-NAWM/kPB-NAWM CVs ranging 6.8–16.6%/10.6–40.7%. In 4/5 patients, these values (0.018 s−1 ± 13.4% and 0.0058 s−1 ± 24.4%; n = 13) were more similar to those from healthy volunteers (0.018 s−1 ± 5.0% and 0.0043 s−1 ± 12.6%; n = 6) (mean ± CV). The anti-angiogenic agent bevacizumab was associated with global elevations in apparent rate constants, with maximum kPL-NAWM in 2 patients reaching 0.047 ± 0.001 and 0.047 ± 0.003 s−1 (±model error). In 3 patients with progressive disease, anatomic lesions showed elevated kPL relative to kPL-NAWM of 0.024 ± 0.001 s−1 (±model error) in the absence of gadolinium enhancement, and 0.032 ± 0.008, 0.040 ± 0.003 and 0.041 ± 0.009 s−1 with gadolinium enhancement. The lesion kPB in patients was reduced to unquantifiable values compared to kPB-NAWM. Conclusion Serial measures of HP [1-13C]pyruvate metabolism displayed consistency in the NAWM of healthy volunteers and patients. Both kPL and kPB were globally elevated following bevacizumab treatment, while progressive disease demonstrated elevated kPL in gadolinium-enhancing and non-enhancing lesions. Larger prospective studies with homogeneous patient populations are planned to evaluate metabolic changes following treatment.
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Affiliation(s)
- Adam W Autry
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, USA
| | - Jeremy W Gordon
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, USA
| | - Hsin-Yu Chen
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, USA
| | - Marisa LaFontaine
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, USA
| | - Robert Bok
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, USA
| | - Mark Van Criekinge
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, USA
| | - James B Slater
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, USA
| | - Lucas Carvajal
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, USA
| | - Javier E Villanueva-Meyer
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, USA
| | - Susan M Chang
- Department of Neurological Surgery, University of California San Francisco, San Francisco, USA
| | - Jennifer L Clarke
- Department of Neurological Surgery, University of California San Francisco, San Francisco, USA
| | - Janine M Lupo
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, USA
| | - Duan Xu
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, USA
| | - Peder E Z Larson
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, USA
| | - Daniel B Vigneron
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, USA; Department of Bioengineering and Therapeutic Sciences, University of California San Francisco, San Francisco, USA
| | - Yan Li
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, USA.
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Huang CH, Ogier SE, Gu M, Wright SM. Flexible RF Filtering Front-End For Simultaneous Multinuclear MR Spectroscopy. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2019; 2018:1368-1371. [PMID: 30440646 DOI: 10.1109/embc.2018.8512558] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
Simultaneously interrogation of multiple nuclei has been of interest since the very earliest days of MRI [1]-[3]. Our group and several others are revisiting this topic [4]-[6]. Very fast broadband electronics make it possible to digitize a wide spectrum, including multiple nuclei, but this places great demands on data throughput. Another issue is that there can be great variance between RF preamplifier gain required for the different nuclei. To overcome the data problem, it is desirable to use undersampling, but this requires passband filtering around the resonant frequency of each nuclei. Here we present a frequency agile front end that provides separate data paths for each nucleus, either from a single coil or from multiple ports, allows independent gain, filters each using very flexible transmission line filtering, and then combines them back for undersampling.
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6
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A Single-Scan Inhomogeneity-Tolerant NMR Method for High-Resolution Two-Dimensional J-Resolved Spectroscopy. IEEE Trans Biomed Eng 2018; 66:1559-1566. [PMID: 30334743 DOI: 10.1109/tbme.2018.2875797] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
OBJECTIVE A robust and general single-scan NMR method, SGEN-J, is proposed for real-time recording high-resolution two-dimensional (2D) homonuclear J-resolved spectra under inhomogeneous magnetic fields. METHODS This proposed NMR method is designed based on the combination of a selective gradient encoding module to encode chemical shifts with spatial positions, and a J-modulation decoding module to reveal encoded structural information. Multi-band SGEN-J is further implemented to effectively enhance spectral sensitivity with a sustained tolerance of field inhomogeneity. RESULTS The SGEN-J provides an effective way to rapidly recover chemical shifts, J coupling constants, and multiplet patterns under inhomogeneous magnetic fields. Experiments on various chemical solutions were performed to demonstrate the feasibility and effectiveness of SGEN-J. Experiments on pig marrow tissues were performed to further investigate the applicability of SGEN-J to biological samples with intrinsic susceptibility variations. CONCLUSION Based on intrinsic advantages, SGEN-J serves as a helpful complement to existing 2D J-resolved methodologies in molecular structure elucidation and biomedical study, and offer bright perspectives for real-time analyzing in vivo biological systems and monitoring in situ chemical reactions.
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Serrao E, Kettunen M, Rodrigues T, Lewis D, Gallagher F, Hu D, Brindle K. Analysis of 13 C and 14 C labeling in pyruvate and lactate in tumor and blood of lymphoma-bearing mice injected with 13 C- and 14 C-labeled pyruvate. NMR IN BIOMEDICINE 2018; 31:e3901. [PMID: 29457661 PMCID: PMC5947589 DOI: 10.1002/nbm.3901] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2017] [Revised: 12/01/2017] [Accepted: 01/04/2018] [Indexed: 05/08/2023]
Abstract
Measurements of hyperpolarized 13 C label exchange between injected [1-13 C]pyruvate and the endogenous tumor lactate pool can give an apparent first-order rate constant for the exchange. The determination of the isotope flux, however, requires an estimate of the labeled pyruvate concentration in the tumor. This was achieved here by measurement of the tumor uptake of [1-14 C]pyruvate, which showed that <2% of the injected pyruvate reached the tumor site. Multiplication of this estimated labeled pyruvate concentration in the tumor with the apparent first-order rate constant for hyperpolarized 13 C label exchange gave an isotope flux that showed good agreement with a flux determined directly by the injection of non-polarized [3-13 C]pyruvate, rapid excision of the tumor after 30 s and measurement of 13 C-labeled lactate concentrations in tumor extracts. The distribution of labeled lactate between intra- and extracellular compartments and the blood pool was investigated by imaging, by measurement of the labeled lactate concentration in blood and tumor, and by examination of the effects of a gadolinium contrast agent and a lactate transport inhibitor on the intensity of the hyperpolarized [1-13 C]lactate signal. These measurements showed that there was significant export of labeled lactate from the tumor, but that labeled lactate in the blood pool produced by the injection of hyperpolarized [1-13 C]pyruvate showed only relatively low levels of polarization. This study shows that measurements of hyperpolarized 13 C label exchange between pyruvate and lactate in a murine tumor model can provide an estimate of the true isotope flux if the concentration of labeled pyruvate that reaches the tumor can be determined.
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Affiliation(s)
- E.M. Serrao
- Cancer Research UK Cambridge InstituteUniversity of CambridgeCambridgeUK
- Department of BiochemistryUniversity of CambridgeCambridgeUK
- Department of RadiologyUniversity of CambridgeCambridgeUK
| | - M.I. Kettunen
- A. I. Virtanen Institute for Molecular SciencesUniversity of Eastern FinlandKuopioFinland
| | - T.B. Rodrigues
- Cancer Research UK Cambridge InstituteUniversity of CambridgeCambridgeUK
- Department of BiochemistryUniversity of CambridgeCambridgeUK
| | - D.Y. Lewis
- Cancer Research UK Beatson InstituteGlasgowUK
| | - F.A. Gallagher
- Department of RadiologyUniversity of CambridgeCambridgeUK
| | - D.E. Hu
- Cancer Research UK Cambridge InstituteUniversity of CambridgeCambridgeUK
- Department of BiochemistryUniversity of CambridgeCambridgeUK
| | - K.M. Brindle
- Cancer Research UK Cambridge InstituteUniversity of CambridgeCambridgeUK
- Department of BiochemistryUniversity of CambridgeCambridgeUK
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8
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Wang K, Huang Y, Smith PES, Zhang Z, Cai S, Chen Z. Single-Scan High-Resolution 2-D $J$ -Resolved Spectroscopy in Inhomogeneous Magnetic Fields. IEEE Trans Biomed Eng 2018; 65:440-448. [PMID: 29346111 DOI: 10.1109/tbme.2017.2773602] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
OBJECTIVE A method is proposed to obtain high-resolution 2-D -resolved nuclear magnetic resonance (NMR) spectra in inhomogeneous magnetic fields. METHODS The proposed experiment enables the acquisition of an entire 2-D spectrum in a single scan by utilizing intermolecular double-quantum coherences and the spatial encoding of NMR observables. RESULTS Chemical shifts, coupling constants, and multiplet patterns are recovered even when field inhomogeneities are severe enough to completely obscure conventional NMR spectra. After intentional deshimming to yield inhomogeneous magnetic fields, the method was demonstrated on ethyl 3-bromoproprionate in acetone and on a complex mixture of organic compounds. To illustrate the technique's applicability to biological samples with intrinsic magnetic field inhomogeneities arising from macroscopic magnetic susceptibility variations, we performed the experiment on a pig bone marrow sample. CONCLUSION Our results show that the new method is a fast and effective tool for studying complex chemical mixtures and biological tissues. SIGNIFICANCE The method could potentially be useful for real-time in vivo NMR studies.
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9
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Niles DJ, Gordon JW, Huang G, Reese S, Adamson EB, Djamali A, Fain SB. Evaluation of renal metabolic response to partial ureteral obstruction with hyperpolarized 13 C MRI. NMR IN BIOMEDICINE 2018; 31. [PMID: 29130537 PMCID: PMC5736002 DOI: 10.1002/nbm.3846] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/12/2016] [Revised: 09/17/2017] [Accepted: 09/18/2017] [Indexed: 05/13/2023]
Abstract
Hyperpolarized 13 C magnetic resonance imaging (MRI) may be used to non-invasively image the transport and chemical conversion of 13 C-labeled compounds in vivo. In this study, we utilize hyperpolarized 13 C MRI to evaluate metabolic markers in the kidneys longitudinally in a mouse model of partial unilateral ureteral obstruction (pUUO). Partial obstruction was surgically induced in the left ureter of nine adult mice, leaving the right ureter as a control. 1 H and hyperpolarized [1-13 C]pyruvate MRI of the kidneys was performed 2 days prior to surgery (baseline) and at 3, 7 and 14 days post-surgery. Images were evaluated for changes in renal pelvis volume, pyruvate, lactate and the lactate to pyruvate ratio. After 14 days, mice were sacrificed and immunohistological staining of both kidneys for collagen fibrosis (picrosirius red) and macrophage infiltration (F4/80) was performed. Statistical analysis was performed using a linear mixed effects model. Significant kidney × time interaction effects were observed for both lactate and pyruvate, indicating that these markers changed differently between time points for the obstructed and unobstructed kidneys. Both kidneys showed an increase in the lactate to pyruvate ratio after obstruction, suggesting a shift towards glycolytic metabolism. These changes were accompanied by marked hydronephrosis, fibrosis and macrophage infiltration in the obstructed kidney, but not in the unobstructed kidney. Our results show that pUUO is associated with increased pyruvate to lactate metabolism in both kidneys, with injury and inflammation specific to the obstructed kidney. The work also demonstrates the feasibility of the use of hyperpolarized 13 C MRI to study metabolism in renal disease.
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Affiliation(s)
- David J Niles
- Medical Physics, University of Wisconsin-Madison, Madison, WI, USA
| | - Jeremy W Gordon
- Medical Physics, University of Wisconsin-Madison, Madison, WI, USA
| | - Gengwen Huang
- Surgery, University of Wisconsin-Madison, Madison, WI, USA
| | - Shannon Reese
- Medicine, Nephrology, University of Wisconsin-Madison, Madison, WI, USA
| | - Erin B Adamson
- Medical Physics, University of Wisconsin-Madison, Madison, WI, USA
| | - Arjang Djamali
- Medicine, Nephrology, University of Wisconsin-Madison, Madison, WI, USA
- University of Wisconsin School of Medicine and Public Health, Madison, WI, USA
| | - Sean B Fain
- Medical Physics, University of Wisconsin-Madison, Madison, WI, USA
- University of Wisconsin School of Medicine and Public Health, Madison, WI, USA
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Lu H, Zhang X, Qiu T, Yang J, Ying J, Guo D, Chen Z, Qu X. Low Rank Enhanced Matrix Recovery of Hybrid Time and Frequency Data in Fast Magnetic Resonance Spectroscopy. IEEE Trans Biomed Eng 2017; 65:809-820. [PMID: 28682242 DOI: 10.1109/tbme.2017.2719709] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
GOAL The two dimensional magnetic resonance spectroscopy (MRS) possesses many important applications in bioengineering but suffers from long acquisition duration. Non-uniform sampling has been applied to the spatiotemporally encoded ultrafast MRS, but results in missing data in the hybrid time and frequency plane. An approach is proposed to recover this missing signal, of which enables high quality spectrum reconstruction. M ethods: The natural exponential characteristic of MRS is exploited to recover the hybrid time and frequency signal. The reconstruction issue is formulated as a low rank enhanced Hankel matrix completion problem and is solved by a fast numerical algorithm. RESULTS Experiments on synthetic and real MRS data show that the proposed method provides faithful spectrum reconstruction, and outperforms the state-of-the-art compressed sensing approach on recovering low-intensity spectral peaks and robustness to different sampling patterns. C onclusion: The exponential signal property serves as an useful tool to model the time-domain MRS signals and even allows missing data recovery. The proposed method has been shown to reconstruct high quality MRS spectra from non-uniformly sampled data in the hybrid time and frequency plane. SIGNIFICANCE Low-intensity signal reconstruction is generally challenging in biological MRS and we provide a solution to this problem. The proposed method may be extended to recover signals that generally can be modeled as a sum of exponential functions in biomedical engineering applications, e.g., signal enhancement, feature extraction, and fast sampling.
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11
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Ohliger MA, von Morze C, Marco-Rius I, Gordon J, Larson PEZ, Bok R, Chen HY, Kurhanewicz J, Vigneron D. Combining hyperpolarized 13 C MRI with a liver-specific gadolinium contrast agent for selective assessment of hepatocyte metabolism. Magn Reson Med 2017; 77:2356-2363. [PMID: 27298073 PMCID: PMC5156580 DOI: 10.1002/mrm.26296] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2016] [Revised: 04/23/2016] [Accepted: 05/16/2016] [Indexed: 12/13/2022]
Abstract
PURPOSE Hyperpolarized 13 C MRI is a powerful tool for studying metabolism, but can lack tissue specificity. Gadoxetate is a gadolinium-based MRI contrast agent that is selectively taken into hepatocytes. The goal of this project was to investigate whether gadoxetate can be used to selectively suppress the hyperpolarized signal arising from hepatocytes, which could in future studies be applied to generate specificity for signal from abnormal cell types. METHODS Baseline gadoxetate uptake kinetics were measured using T1 -weighted contrast enhanced imaging. Relaxivity of gadoxetate was measured for [1-13 C]pyruvate, [1-13 C]lactate, and [1-13 C]alanine. Four healthy rats were imaged with hyperpolarized [1-13 C]pyruvate using a three-dimensional (3D) MRSI sequence prior to and 15 min following administration of gadoxetate. The lactate:pyruvate ratio and alanine:pyruvate ratios were measured in liver and kidney. RESULTS Overall, the hyperpolarized signal decreased approximately 60% as a result of pre-injection of gadoxetate. In liver, the lactate:pyruvate and alanine:pyruvate ratios decreased 42% and 78%, respectively (P < 0.05) following gadoxetate administration. In kidneys, these ratios did not change significantly. Relaxivity of gadoxetate for [1-13 C]alanine was 12.6 times higher than relaxivity of gadoxetate for [1-13 C]pyruvate, explaining the greater selective relaxation effect on alanine. CONCLUSIONS The liver-specific gadolinium contrast-agent gadoxetate can selectively suppress normal hepatocyte contributions to hyperpolarized 13 C MRI signals. Magn Reson Med 77:2356-2363, 2017. © 2016 International Society for Magnetic Resonance in Medicine.
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Affiliation(s)
- Michael A. Ohliger
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, San Francisco, CA
| | - Cornelius von Morze
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, San Francisco, CA
| | - Irene Marco-Rius
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, San Francisco, CA
| | - Jeremy Gordon
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, San Francisco, CA
| | - Peder E. Z. Larson
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, San Francisco, CA
| | - Robert Bok
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, San Francisco, CA
| | - Hsin-yu Chen
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, San Francisco, CA
| | - John Kurhanewicz
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, San Francisco, CA
| | - Daniel Vigneron
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, San Francisco, CA
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12
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Adamson EB, Ludwig KD, Mummy DG, Fain SB. Magnetic resonance imaging with hyperpolarized agents: methods and applications. Phys Med Biol 2017; 62:R81-R123. [PMID: 28384123 DOI: 10.1088/1361-6560/aa6be8] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
In the past decade, hyperpolarized (HP) contrast agents have been under active development for MRI applications to address the twin challenges of functional and quantitative imaging. Both HP helium (3He) and xenon (129Xe) gases have reached the stage where they are under study in clinical research. HP 129Xe, in particular, is poised for larger scale clinical research to investigate asthma, chronic obstructive pulmonary disease, and fibrotic lung diseases. With advances in polarizer technology and unique capabilities for imaging of 129Xe gas exchange into lung tissue and blood, HP 129Xe MRI is attracting new attention. In parallel, HP 13C and 15N MRI methods have steadily advanced in a wide range of pre-clinical research applications for imaging metabolism in various cancers and cardiac disease. The HP [1-13C] pyruvate MRI technique, in particular, has undergone phase I trials in prostate cancer and is poised for investigational new drug trials at multiple institutions in cancer and cardiac applications. This review treats the methodology behind both HP gases and HP 13C and 15N liquid state agents. Gas and liquid phase HP agents share similar technologies for achieving non-equilibrium polarization outside the field of the MRI scanner, strategies for image data acquisition, and translational challenges in moving from pre-clinical to clinical research. To cover the wide array of methods and applications, this review is organized by numerical section into (1) a brief introduction, (2) the physical and biological properties of the most common polarized agents with a brief summary of applications and methods of polarization, (3) methods for image acquisition and reconstruction specific to improving data acquisition efficiency for HP MRI, (4) the main physical properties that enable unique measures of physiology or metabolic pathways, followed by a more detailed review of the literature describing the use of HP agents to study: (5) metabolic pathways in cancer and cardiac disease and (6) lung function in both pre-clinical and clinical research studies, concluding with (7) some future directions and challenges, and (8) an overall summary.
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Affiliation(s)
- Erin B Adamson
- Department of Medical Physics, University of Wisconsin-Madison, Madison, WI, United States of America
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Lee H, Lee J, Joe E, Yang S, Song JE, Choi YS, Wang E, Joo CG, Song HT, Kim DH. Flow-suppressed hyperpolarized 13 C chemical shift imaging using velocity-optimized bipolar gradient in mouse liver tumors at 9.4 T. Magn Reson Med 2016; 78:1674-1682. [PMID: 28019020 DOI: 10.1002/mrm.26578] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2016] [Revised: 11/21/2016] [Accepted: 11/21/2016] [Indexed: 12/21/2022]
Abstract
PURPOSE To optimize and investigate the influence of bipolar gradients for flow suppression in metabolic quantification of hyperpolarized 13 C chemical shift imaging (CSI) of mouse liver at 9.4 T. METHODS The trade-off between the amount of flow suppression using bipolar gradients and T2* effect from static spins was simulated. A free induction decay CSI sequence with alternations between the flow-suppressed and non-flow-suppressed acquisitions for each repetition time was developed and was applied to liver tumor-bearing mice via injection of hyperpolarized [1-13 C] pyruvate. RESULTS The in vivo results from flow suppression using the velocity-optimized bipolar gradient were comparable with the simulation results. The vascular signal was adequately suppressed and signal loss in stationary tissue was minimized. Application of the velocity-optimized bipolar gradient to tumor-bearing mice showed reduction in the vessel-derived pyruvate signal contamination, and the average lactate/pyruvate ratio increased by 0.095 (P < 0.05) in the tumor region after flow suppression. CONCLUSION Optimization of the bipolar gradient is essential because of the short 13 C T2* and high signal in venous flow in the mouse liver. The proposed velocity-optimized bipolar gradient can suppress the vascular signal, minimizing T2*-related signal loss in stationary tissues at 9.4 T. Magn Reson Med 78:1674-1682, 2017. © 2016 International Society for Magnetic Resonance in Medicine.
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Affiliation(s)
- Hansol Lee
- Department of Electrical and Electronic Engineering, Yonsei University, Seoul, Korea
| | - Joonsung Lee
- Center for Neuroscience Imaging Research, Institute for Basic Science, Suwon, Korea
| | - Eunhae Joe
- Department of Electrical and Electronic Engineering, Yonsei University, Seoul, Korea
| | - Seungwook Yang
- Department of Electrical and Electronic Engineering, Yonsei University, Seoul, Korea
| | - Jae Eun Song
- Department of Electrical and Electronic Engineering, Yonsei University, Seoul, Korea
| | - Young-Suk Choi
- Department of Radiology, College of Medicine, Yonsei University, Seoul, Korea
| | - Eunkyung Wang
- Department of Radiology, College of Medicine, Yonsei University, Seoul, Korea
| | - Chan Gyu Joo
- Severance Biomedical Science Institute, College of Medicine, Yonsei University, Seoul, Korea
| | - Ho-Taek Song
- Department of Radiology, College of Medicine, Yonsei University, Seoul, Korea
| | - Dong-Hyun Kim
- Department of Electrical and Electronic Engineering, Yonsei University, Seoul, Korea
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14
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Durst M, Koellisch U, Daniele V, Steiger K, Schwaiger M, Haase A, Menzel MI, Schulte RF, Aime S, Reineri F. Probing lactate secretion in tumours with hyperpolarised NMR. NMR IN BIOMEDICINE 2016; 29:1079-1087. [PMID: 27348729 DOI: 10.1002/nbm.3574] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2015] [Revised: 05/18/2016] [Accepted: 05/19/2016] [Indexed: 06/06/2023]
Abstract
Most tumours exhibit a high rate of glycolysis and predominantly produce energy by lactic acid fermentation. To maintain energy production and prevent toxicity, the lactate generated needs to be rapidly transported out of the cell. This is achieved by monocarboxylate transporters (MCTs), which therefore play an essential role in cancer metabolism and development. In vivo experiments were performed on eight male Fisher F344 rats bearing a subcutaneous mammary carcinoma after injection of hyperpolarised [1-(13) C]pyruvate. A Gd(III)DO3A complex that binds to pyruvate and its metabolites was used to efficiently destroy the extracellular magnetisation after hyperpolarised lactate had been formed. Moreover, a pulse sequence including a frequency-selective saturation pulse was designed so that the pyruvate magnetisation could be destroyed to exclude effects arising from further conversion. Given this preparation, metabolite transport out of the cell manifested as additional decay and apparent cell membrane transporter rates could thus be obtained using a reference measurement without a relaxation agent. In addition to slice-selective spectra, spatially resolved maps of apparent membrane transporter activity were acquired using a single-shot spiral gradient readout. A considerable increase in decay rate was detected for lactate, indicating rapid transport out of the cell. The alanine signal was unaltered, which corresponds to a slower efflux rate. This technique could allow for better understanding of tumour metabolism and progression, and enable treatment response measurements for MCT-targeted cancer therapies. Moreover, it provides vital insights into the signal kinetics of hyperpolarised [1-(13) C]pyruvate examinations. Copyright © 2016 John Wiley & Sons, Ltd.
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Affiliation(s)
- Markus Durst
- IMETUM, Technische Universität München, Garching, Germany
- GE Global Research, Garching, Germany
| | - Ulrich Koellisch
- IMETUM, Technische Universität München, Garching, Germany
- GE Global Research, Garching, Germany
| | | | | | - Markus Schwaiger
- Nuklearmedizinische Klinik und Poliklinik,Klinikum rechts der Isar, Technische Universität München, Munich, Germany
| | - Axel Haase
- IMETUM, Technische Universität München, Garching, Germany
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15
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Reineri F, Daniele V, Cavallari E, Aime S. Assessing the transport rate of hyperpolarized pyruvate and lactate from the intra- to the extracellular space. NMR IN BIOMEDICINE 2016; 29:1022-1027. [PMID: 27271484 DOI: 10.1002/nbm.3562] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2015] [Revised: 04/11/2016] [Accepted: 04/25/2016] [Indexed: 06/06/2023]
Abstract
The use of [1-(13) C]pyruvate hyperpolarized by means of dynamic nuclear polarization provides a direct way to track the metabolic transformations of this metabolite in vivo and in cell cultures. The identification of the intra- and extracellular contributions to the (13) C NMR resonances is not straightforward. In order to obtain information about the rate of pyruvate and lactate transport through the cellular membrane, we set up a method that relies on the sudden 'quenching' of the extracellular metabolites' signal. The paramagnetic Gd-tetraazacyclododecane triacetic acid (Gd-DO3A) complex was used to dramatically decrease the longitudinal relaxation time constants of the (13) C-carboxylate resonances of both pyruvate and lactate. When Gd-DO3A was added to an MCF-7 cellular culture, which had previously received a dose of hyperpolarized [1-(13) C]pyruvate, the contributions of the extracellular pyruvate and lactate signals were deleted. From the analysis of the decay curves of the (13) C-carboxylate resonances of pyruvate and lactate it was possible to extract information about the exchange rate of the two metabolites across the cellular membrane. In particular, it was found that, in the reported experimental conditions, the lactate transport from the intra- to the extracellular space is not much lower than the rate of lactate formation. The method reported herein is non-destructive and it could be translated to in vivo studies. It opens a route for the use of hyperpolarized pyruvate to assess altered activity of carboxylate transporter proteins that may occur in pathological conditions. Copyright © 2016 John Wiley & Sons, Ltd.
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Affiliation(s)
- Francesca Reineri
- Department of Molecular Biotechnology and Health Sciences, University of Torino, Turin, Italy
| | - Valeria Daniele
- Department of Molecular Biotechnology and Health Sciences, University of Torino, Turin, Italy
| | - Eleonora Cavallari
- Department of Molecular Biotechnology and Health Sciences, University of Torino, Turin, Italy
| | - Silvio Aime
- Department of Molecular Biotechnology and Health Sciences, University of Torino, Turin, Italy
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16
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Reed GD, von Morze C, Verkman AS, Koelsch BL, Chaumeil MM, Lustig M, Ronen SM, Bok RA, Sands JM, Larson PEZ, Wang ZJ, Larsen JHA, Kurhanewicz J, Vigneron DB. Imaging Renal Urea Handling in Rats at Millimeter Resolution using Hyperpolarized Magnetic Resonance Relaxometry. ACTA ACUST UNITED AC 2016; 2:125-135. [PMID: 27570835 PMCID: PMC4996281 DOI: 10.18383/j.tom.2016.00127] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
In vivo spin spin relaxation time (T2) heterogeneity of hyperpolarized [13C,15N2]urea in the rat kidney was investigated. Selective quenching of the vascular hyperpolarized 13C signal with a macromolecular relaxation agent revealed that a long-T2 component of the [13C,15N2]urea signal originated from the renal extravascular space, thus allowing the vascular and renal filtrate contrast agent pools of the [13C,15N2]urea to be distinguished via multi-exponential analysis. The T2 response to induced diuresis and antidiuresis was performed with two imaging agents: hyperpolarized [13C,15N2]urea and a control agent hyperpolarized bis-1,1-(hydroxymethyl)-1-13C-cyclopropane-2H8. Large T2 increases in the inner-medullar and papilla were observed with the former agent and not the latter during antidiuresis. Therefore, [13C,15N2]urea relaxometry is sensitive to two steps of the renal urea handling process: glomerular filtration and the inner-medullary urea transporter (UT)-A1 and UT-A3 mediated urea concentrating process. Simple motion correction and subspace denoising algorithms are presented to aid in the multi exponential data analysis. Furthermore, a T2-edited, ultra long echo time sequence was developed for sub-2 mm3 resolution 3D encoding of urea by exploiting relaxation differences in the vascular and filtrate pools.
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Affiliation(s)
- Galen D Reed
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA; Graduate Group in Bioengineering University of California San Francisco, San Francisco, California, USA, and University of California Berkeley, Berkeley, California, USA
| | - Cornelius von Morze
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA
| | - Alan S Verkman
- Departments of Medicine and Physiology, University of California San Francisco, San Francisco, California, USA
| | - Bertram L Koelsch
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA; Graduate Group in Bioengineering University of California San Francisco, San Francisco, California, USA, and University of California Berkeley, Berkeley, California, USA
| | - Myriam M Chaumeil
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA
| | - Michael Lustig
- Graduate Group in Bioengineering University of California San Francisco, San Francisco, California, USA, and University of California Berkeley, Berkeley, California, USA; Department of Electrical Engineering and Computer Sciences, University of California Berkeley, Berkeley, California, USA
| | - Sabrina M Ronen
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA; Graduate Group in Bioengineering University of California San Francisco, San Francisco, California, USA, and University of California Berkeley, Berkeley, California, USA
| | - Robert A Bok
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA
| | - Jeff M Sands
- Department of Medicine, Renal Division, Emory University, Atlanta, Georgia, USA
| | - Peder E Z Larson
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA; Graduate Group in Bioengineering University of California San Francisco, San Francisco, California, USA, and University of California Berkeley, Berkeley, California, USA
| | - Zhen J Wang
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA
| | - Jan Henrik Ardenkjær Larsen
- GE Healthcare, Brøndby, Denmark; Department of Electrical Engineering, Technical University of Denmark, Kongens Lyngby, Denmark
| | - John Kurhanewicz
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA; Graduate Group in Bioengineering University of California San Francisco, San Francisco, California, USA, and University of California Berkeley, Berkeley, California, USA
| | - Daniel B Vigneron
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA; Graduate Group in Bioengineering University of California San Francisco, San Francisco, California, USA, and University of California Berkeley, Berkeley, California, USA
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17
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Reed GD, von Morze C, Verkman AS, Koelsch BL, Chaumeil MM, Lustig M, Ronen SM, Bok RA, Sands JM, Larson PEZ, Wang ZJ, Larsen JHA, Kurhanewicz J, Vigneron DB. Imaging Renal Urea Handling in Rats at Millimeter Resolution using Hyperpolarized Magnetic Resonance Relaxometry. Tomography 2016. [PMID: 27570835 DOI: 10.18383/j.tom2016.00127] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/24/2023] Open
Abstract
In vivo spin spin relaxation time (T2) heterogeneity of hyperpolarized [13C,15N2]urea in the rat kidney was investigated. Selective quenching of the vascular hyperpolarized 13C signal with a macromolecular relaxation agent revealed that a long-T2 component of the [13C,15N2]urea signal originated from the renal extravascular space, thus allowing the vascular and renal filtrate contrast agent pools of the [13C,15N2]urea to be distinguished via multi-exponential analysis. The T2 response to induced diuresis and antidiuresis was performed with two imaging agents: hyperpolarized [13C,15N2]urea and a control agent hyperpolarized bis-1,1-(hydroxymethyl)-1-13C-cyclopropane-2H8. Large T2 increases in the inner-medullar and papilla were observed with the former agent and not the latter during antidiuresis. Therefore, [13C,15N2]urea relaxometry is sensitive to two steps of the renal urea handling process: glomerular filtration and the inner-medullary urea transporter (UT)-A1 and UT-A3 mediated urea concentrating process. Simple motion correction and subspace denoising algorithms are presented to aid in the multi exponential data analysis. Furthermore, a T2-edited, ultra long echo time sequence was developed for sub-2 mm3 resolution 3D encoding of urea by exploiting relaxation differences in the vascular and filtrate pools.
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Affiliation(s)
- Galen D Reed
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA; Graduate Group in Bioengineering University of California San Francisco, San Francisco, California, USA, and University of California Berkeley, Berkeley, California, USA
| | - Cornelius von Morze
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA
| | - Alan S Verkman
- Departments of Medicine and Physiology, University of California San Francisco, San Francisco, California, USA
| | - Bertram L Koelsch
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA; Graduate Group in Bioengineering University of California San Francisco, San Francisco, California, USA, and University of California Berkeley, Berkeley, California, USA
| | - Myriam M Chaumeil
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA
| | - Michael Lustig
- Graduate Group in Bioengineering University of California San Francisco, San Francisco, California, USA, and University of California Berkeley, Berkeley, California, USA; Department of Electrical Engineering and Computer Sciences, University of California Berkeley, Berkeley, California, USA
| | - Sabrina M Ronen
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA; Graduate Group in Bioengineering University of California San Francisco, San Francisco, California, USA, and University of California Berkeley, Berkeley, California, USA
| | - Robert A Bok
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA
| | - Jeff M Sands
- Department of Medicine, Renal Division, Emory University, Atlanta, Georgia, USA
| | - Peder E Z Larson
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA; Graduate Group in Bioengineering University of California San Francisco, San Francisco, California, USA, and University of California Berkeley, Berkeley, California, USA
| | - Zhen J Wang
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA
| | - Jan Henrik Ardenkjær Larsen
- GE Healthcare, Brøndby, Denmark; Department of Electrical Engineering, Technical University of Denmark, Kongens Lyngby, Denmark
| | - John Kurhanewicz
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA; Graduate Group in Bioengineering University of California San Francisco, San Francisco, California, USA, and University of California Berkeley, Berkeley, California, USA
| | - Daniel B Vigneron
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA; Graduate Group in Bioengineering University of California San Francisco, San Francisco, California, USA, and University of California Berkeley, Berkeley, California, USA
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18
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Gordon JW, Niles DJ, Adamson EB, Johnson KM, Fain SB. Application of flow sensitive gradients for improved measures of metabolism using hyperpolarized (13) c MRI. Magn Reson Med 2015; 75:1242-8. [PMID: 25951611 DOI: 10.1002/mrm.25584] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2014] [Revised: 11/23/2014] [Accepted: 11/25/2014] [Indexed: 12/26/2022]
Abstract
PURPOSE To develop the use of bipolar gradients to suppress partial-volume and flow-related artifacts from macrovascular, hyperpolarized spins. THEORY AND METHODS Digital simulations were performed over a range of spatial resolutions and gradient strengths to determine the optimal bipolar gradient strength and duration to suppress flowing spins while minimizing signal loss from static tissue. In vivo experiments were performed to determine the efficacy of this technique to suppress vascular signal in the study of hyperpolarized [1-(13)C]pyruvate renal metabolism. RESULTS Digital simulations showed that in the absence of bipolar gradients, partial-volume artifacts from the vasculature were still present, causing underestimation of the apparent reaction rate of pyruvate to lactate (kP). The addition of a bipolar gradient with b = 32 s/mm(2) sufficiently suppressed the vascular signal without a substantial decrease in signal from static tissue. In vivo results corroborate digital simulations, with similar peak lactate signal to noise ratio (SNR) but substantially different kP in the presence of bipolar gradients. CONCLUSION The proposed approach suppresses signal from flowing spins while minimizing signal loss from static tissue, removing contaminating signal from the vasculature and increasing kinetic modeling accuracy without substantially sacrificing SNR or temporal resolution.
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Affiliation(s)
- Jeremy W Gordon
- Medical Physics, University of Wisconsin-Madison, Madison, Wisconsin, USA
| | - David J Niles
- Medical Physics, University of Wisconsin-Madison, Madison, Wisconsin, USA
| | - Erin B Adamson
- Medical Physics, University of Wisconsin-Madison, Madison, Wisconsin, USA
| | - Kevin M Johnson
- Medical Physics, University of Wisconsin-Madison, Madison, Wisconsin, USA
| | - Sean B Fain
- Medical Physics, University of Wisconsin-Madison, Madison, Wisconsin, USA.,Radiology, University of Wisconsin-Madison, Madison, Madison, Wisconsin, USA.,Biomedical Engineering, University of Wisconsin-Madison, Madison, Madison, Wisconsin, USA
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19
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Gordon JW, Fain SB, Niles DJ, Ludwig KD, Johnson KM, Peterson ET. Simultaneous imaging of 13C metabolism and 1H structure: technical considerations and potential applications. NMR IN BIOMEDICINE 2015; 28:576-582. [PMID: 25810146 PMCID: PMC4426883 DOI: 10.1002/nbm.3279] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2014] [Revised: 12/15/2014] [Accepted: 01/27/2015] [Indexed: 05/30/2023]
Abstract
Real-time imaging of (13)C metabolism in vivo has been enabled by recent advances in hyperpolarization. As a result of the inherently low natural abundance of endogenous (13)C nuclei, hyperpolarized (13)C images lack structural information that could be used to aid in motion detection and anatomical registration. Motion before or during the (13)C acquisition can therefore result in artifacts and misregistration that may obscure measures of metabolism. In this work, we demonstrate a method to simultaneously image both (1)H and (13)C nuclei using a dual-nucleus spectral-spatial radiofrequency excitation and a fully coincident readout for rapid multinuclear spectroscopic imaging. With the appropriate multinuclear hardware, and the means to simultaneously excite and receive on both channels, this technique is straightforward to implement requiring little to no increase in scan time. Phantom and in vivo experiments were performed with both Cartesian and spiral trajectories to validate and illustrate the utility of simultaneous acquisitions. Motion compensation of dynamic metabolic measurements acquired during free breathing was demonstrated using motion tracking derived from (1)H data. Simultaneous multinuclear imaging provides structural (1)H and metabolic (13)C images that are correlated both spatially and temporally, and are therefore amenable to joint (1)H and (13)C analysis and correction of structure-function images.
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Affiliation(s)
- Jeremy W Gordon
- Department of Medical Physics, University of Wisconsin, Madison, WI, USA
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20
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Kadlecek S, Shaghaghi H, Siddiqi S, Profka H, Pourfathi M, Rizi R. The effect of exogenous substrate concentrations on true and apparent metabolism of hyperpolarized pyruvate in the isolated perfused lung. NMR IN BIOMEDICINE 2014; 27:1557-1570. [PMID: 25330438 PMCID: PMC4342041 DOI: 10.1002/nbm.3219] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2014] [Revised: 08/12/2014] [Accepted: 08/26/2014] [Indexed: 06/04/2023]
Abstract
Although relatively metabolically inactive, the lung has an important role in maintaining systemic glycolytic intermediate and cytosolic redox balance. Failure to perform this function appropriately may lead to lung disease progression, including systemic aspects of these disorders. In this study, we experimentally probe the response of the isolated, perfused organ to varying glycolytic intermediate (pyruvate and lactate) concentrations, and the effect on the apparent metabolism of hyperpolarized 1-(13)C pyruvate. Twenty-four separate conditions were studied, from sub-physiological to super-physiological concentrations of each metabolite. A three-compartment model is developed, which accurately matches the full range of experiments and includes a full account of evolution of agent concentration and polarization. The model is then refined using a series of approximations which are shown to be applicable to cases of physiological relevance, and which facilitate an intuitive understanding of the saturation and scaling behavior. Perturbations of the model assumptions are used to determine the sensitivity to input parameter estimates, and finally the model is used to examine the relationship between measurements accessible by NMR and the underlying physiological parameters of interest. Based on the observed scaling of lactate labeling with lactate and pyruvate concentrations, we conclude that the level of hyperpolarized lactate signal in the lung is primarily determined by the rate at which NAD(+) is reduced to NADH. Further, although weak dependences on other factors are predicted, the modeled NAD(+) reduction rate is largely governed by the intracellular lactate pool size. Conditions affecting the lactate pool can therefore be expected to display the highest contrast in hyperpolarized (13)C-pyruvate imaging. The work is intended to serve as a basis both to interpret the signal dynamics of hyperpolarized measurements in the normal lung and to understand the cause of alterations seen in a variety of disease and exposure models.
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21
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Lerche MH, Jensen PR, Karlsson M, Meier S. NMR insights into the inner workings of living cells. Anal Chem 2014; 87:119-32. [PMID: 25084065 DOI: 10.1021/ac501467x] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Mathilde H Lerche
- Albeda Research , Gamle Carlsberg Vej 10, 1799 Copenhagen V, Denmark
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22
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Søgaard LV, Schilling F, Janich MA, Menzel MI, Ardenkjaer-Larsen JH. In vivo measurement of apparent diffusion coefficients of hyperpolarized ¹³C-labeled metabolites. NMR IN BIOMEDICINE 2014; 27:561-9. [PMID: 24664927 DOI: 10.1002/nbm.3093] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2013] [Revised: 01/09/2014] [Accepted: 01/22/2014] [Indexed: 05/14/2023]
Abstract
The combination of hyperpolarized MRS with diffusion weighting (dw) allows for determination of the apparent diffusion coefficient (ADC), which is indicative of the intra- or extracellular localization of the metabolite. Here, a slice-selective pulsed-gradient spin echo sequence was implemented to acquire a series of dw spectra from rat muscle in vivo to determine the ADCs of multiple metabolites after a single injection of hyperpolarized [1- ¹³C]pyruvate. An optimal control optimized universal-rotation pulse was used for refocusing to minimize signal loss caused by B1 imperfections. Non-dw spectra were acquired interleaved with the dw spectra and these were used to correct for signal decay during the acquisition as a result of T1 decay, pulse imperfections, flow etc. The data showed that the ADC values for [1- ¹³C]lactate (0.4-0.7 µm² /ms) and [1- ¹³C]alanine (0.4-0.9 µm² /ms) were about a factor of two lower than the ADC of [1- ¹³C]pyruvate (1.1-1.5 µm²/ms). This indicates a more restricted diffusion space for the former two metabolites consistent with lactate and alanine being intracellular. The higher ADC for pyruvate (similar to the proton ADC) reflected that the injected substance was not confined inside the muscle cells but also present extracellular.
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Affiliation(s)
- Lise Vejby Søgaard
- Danish Research Centre for Magnetic Resonance, Centre for Functional and Diagnostic Imaging and Research, Copenhagen University Hospital Hvidovre, Denmark
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23
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Xu Y, Li YH, Wang Y, Cui JL, Yin XB, He XW, Zhang YK. 13C-engineered carbon quantum dots for in vivo magnetic resonance and fluorescence dual-response. Analyst 2014; 139:5134-9. [DOI: 10.1039/c4an01194e] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
13C-engineered carbon quantum dots (13C-QDs) were used as magnetic resonance (MR) and fluorescence dual-response probe.
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Affiliation(s)
- Yang Xu
- State Key Laboratory of Medicinal Chemical Biology
- Collaborative Innovation Center of Chemical Science and Engineering (Tianjin)
- Research Center for Analytical Sciences
- College of Chemistry
- Nankai University
| | - Yu-Hao Li
- Key Laboratory of Animal Models and Degenerative Neurological Diseases (Tianjin)
- School of Medicine
- Nankai University
- Tianjin, China
| | - Yue Wang
- Key Laboratory of Animal Models and Degenerative Neurological Diseases (Tianjin)
- School of Medicine
- Nankai University
- Tianjin, China
| | - Jian-Lin Cui
- Key Laboratory of Animal Models and Degenerative Neurological Diseases (Tianjin)
- School of Medicine
- Nankai University
- Tianjin, China
| | - Xue-Bo Yin
- State Key Laboratory of Medicinal Chemical Biology
- Collaborative Innovation Center of Chemical Science and Engineering (Tianjin)
- Research Center for Analytical Sciences
- College of Chemistry
- Nankai University
| | - Xi-Wen He
- State Key Laboratory of Medicinal Chemical Biology
- Collaborative Innovation Center of Chemical Science and Engineering (Tianjin)
- Research Center for Analytical Sciences
- College of Chemistry
- Nankai University
| | - Yu-Kui Zhang
- State Key Laboratory of Medicinal Chemical Biology
- Collaborative Innovation Center of Chemical Science and Engineering (Tianjin)
- Research Center for Analytical Sciences
- College of Chemistry
- Nankai University
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24
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Larson PEZ, Hurd RE, Kerr AB, Pauly JM, Bok RA, Kurhanewicz J, Vigneron DB. Perfusion and diffusion sensitive 13C stimulated-echo MRSI for metabolic imaging of cancer. Magn Reson Imaging 2013; 31:635-42. [PMID: 23260391 PMCID: PMC3626756 DOI: 10.1016/j.mri.2012.10.020] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2012] [Revised: 09/20/2012] [Accepted: 10/30/2012] [Indexed: 01/17/2023]
Abstract
Metabolic imaging with hyperpolarized [1-(13)C]-pyruvate can rapidly probe tissue metabolic profiles in vivo and has been shown to provide cancer imaging biomarkers for tumor detection, progression, and response to therapy. This technique uses a bolus injection followed by imaging within 1-2 minutes. The observed metabolites include vascular components and their generation is also influenced by cellular transport. These factors complicate image interpretation, especially since [1-(13)C]lactate, a metabolic product that is a biomarker of cancer, is also produced by red blood cells. It would be valuable to understand the distribution of metabolites between the vasculature, interstitial space, and intracellular compartments. The purpose of this study was to better understand this compartmentalization by using a perfusion and diffusion-sensitive stimulated-echo acquisition mode (STEAM) MRSI acquisition method tailored to hyperpolarized substrates. Our results in mouse models showed that among metabolites, the injected substrate (13)C-pyruvate had the largest vascular fraction overall while (13)C-alanine had the smallest vascular fraction. We observed a larger vascular fraction of pyruvate and lactate in the kidneys and liver when compared to back muscle and prostate tumor tissue. Our data suggests that (13)C-lactate in prostate tumor tissue voxels was the most abundant labeled metabolite intracellularly. This was shown in STEAM images that highlighted abnormal cancer cell metabolism and suppressed vascular (13)C metabolite signals.
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Affiliation(s)
- Peder E Z Larson
- Department of Radiology and Biomedical Imaging, University of California - San Francisco, San Francisco, CA 94158, USA.
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Wild JM, Marshall H, Xu X, Norquay G, Parnell SR, Clemence M, Griffiths PD, Parra-Robles J. Simultaneous Imaging of Lung Structure and Function with Triple-Nuclear Hybrid MR Imaging. Radiology 2013; 267:251-5. [DOI: 10.1148/radiol.12121153] [Citation(s) in RCA: 45] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Kettunen MI, Kennedy BWC, Hu DE, Brindle KM. Spin echo measurements of the extravasation and tumor cell uptake of hyperpolarized [1-(13) C]lactate and [1-(13) C]pyruvate. Magn Reson Med 2012; 70:1200-9. [PMID: 23280500 DOI: 10.1002/mrm.24591] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2012] [Revised: 11/14/2012] [Accepted: 11/16/2012] [Indexed: 11/07/2022]
Abstract
PURPOSE To assess the blood-tissue distribution of hyperpolarized (13) C-labeled molecules in vivo. METHODS Spin-echo experiments with simultaneous acquisition of the free induction decay (FID) signal following the excitation pulse and the spin-echo signal, were used to monitor hyperpolarized [1-(13) C]lactate, [1-(13) C]pyruvate, and the perfusion marker, [(13) C]HP001, following their intravenous injection into tumor-bearing mice. Apparent T2 relaxation times and diffusion coefficients were also measured. RESULTS An increasing tumor echo/FID ratio was observed for all three molecules, which could be explained by their extravasation into the tumor interstitial space, where T2 relaxation times were longer and diffusion coefficients smaller. Inhibition of the monocarboxylate transporter, which decreased by 40% the label exchange between pyruvate and lactate, reduced the increase in the echo/FID ratio for pyruvate and lactate, but not for HP001, demonstrating that some of the increase in the echo/FID ratio was due to cell uptake of lactate and pyruvate. The different relaxation and diffusion behavior of the intravascular and extravascular signals affected measurements of the apparent label exchange rate constants. CONCLUSION Simultaneous collection of both FID and echo signals can provide information on cell uptake thus giving further insight into the kinetics of hyperpolarized (13) C label exchange. Care is needed when comparing exchange rate constants determined in spin-echo-based studies.
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Affiliation(s)
- Mikko I Kettunen
- Cancer Research UK Cambridge Research Institute, Cambridge, UK; Department of Biochemistry, University of Cambridge, Cambridge, UK
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Viale A, Reineri F, Dastrù W, Aime S. Hyperpolarized (13)C-pyruvate magnetic resonance imaging in cancer diagnostics. ACTA ACUST UNITED AC 2012; 6:335-45. [PMID: 23480742 DOI: 10.1517/17530059.2012.687372] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
INTRODUCTION The use of hyperpolarized molecules allows one to obtain information about metabolism in both cells and animals; such a task represents a tremendous advancement with respect to the results achieved so far with in vivo NMR techniques. Pyruvate appears an excellent tumor biomarker as it allows the attainment of early diagnosis, stadiation and monitoring of response to therapy. AREAS COVERED As pyruvate conversion to lactate in the glycolytic pathway is highly enhanced in tumor cells, the 1-(13)C-lactate levels after administration of hyperpolarized 1-(13)C-pyruvate are markedly higher in tumor tissues and depend on the type and grade of the tumor. This review covers the most recent research results (both in vitro and in vivo) about the use of hyperpolarized 1-(13)C-pyruvate for tumor localization, stadiation and for monitoring the response to therapy. The technique may find application in clinics, especially when other imaging modalities are of difficult applicability. EXPERT OPINION While (13)C-pyruvate has been shown to be the candidate of choice for metabolic imaging, high expectations are present in the scientific community to see if other hyperpolarized substrates could provide more specific and sensitive biomarkers. The use of hyperpolarized molecules will have a tremendous impact in the armory of diagnostic tools.
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Affiliation(s)
- Alessandra Viale
- University of Torino, Department of Chemistry and Molecular Biotechnology Centre , V. Nizza 52, 10126 Torino , Italy
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