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Xing W, He C, Ma Y, Liu Y, Zhu Z, Li Q, Li W, Chen J, Ta D. Combining quantitative and qualitative analysis for scoring pleural line in lung ultrasound. Phys Med Biol 2024; 69:095008. [PMID: 38537298 DOI: 10.1088/1361-6560/ad3888] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Accepted: 03/27/2024] [Indexed: 04/18/2024]
Abstract
Objective.Accurate assessment of pleural line is crucial for the application of lung ultrasound (LUS) in monitoring lung diseases, thereby aim of this study is to develop a quantitative and qualitative analysis method for pleural line.Approach.The novel cascaded deep learning model based on convolution and multilayer perceptron was proposed to locate and segment the pleural line in LUS images, whose results were applied for quantitative analysis of textural and morphological features, respectively. By using gray-level co-occurrence matrix and self-designed statistical methods, eight textural and three morphological features were generated to characterize the pleural lines. Furthermore, the machine learning-based classifiers were employed to qualitatively evaluate the lesion degree of pleural line in LUS images.Main results.We prospectively evaluated 3770 LUS images acquired from 31 pneumonia patients. Experimental results demonstrated that the proposed pleural line extraction and evaluation methods all have good performance, with dice and accuracy of 0.87 and 94.47%, respectively, and the comparison with previous methods found statistical significance (P< 0.001 for all). Meanwhile, the generalization verification proved the feasibility of the proposed method in multiple data scenarios.Significance.The proposed method has great application potential for assessment of pleural line in LUS images and aiding lung disease diagnosis and treatment.
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Affiliation(s)
- Wenyu Xing
- Academy for Engineering and Technology, Fudan University, Shanghai 200433, People's Republic of China
| | - Chao He
- Department of Emergency and Critical Care, Changzheng Hospital, Naval Medical University, Shanghai 200003, People's Republic of China
| | - Yebo Ma
- Shanghai Key Laboratory of Multidimensional Information Processing, East China Normal University, Shanghai 200241, People's Republic of China
| | - Yiman Liu
- Shanghai Key Laboratory of Multidimensional Information Processing, East China Normal University, Shanghai 200241, People's Republic of China
| | - Zhibin Zhu
- School of Information Science and Technology, Fudan University, Shanghai 200438, People's Republic of China
| | - Qingli Li
- Shanghai Key Laboratory of Multidimensional Information Processing, East China Normal University, Shanghai 200241, People's Republic of China
| | - Wenfang Li
- Department of Emergency and Critical Care, Changzheng Hospital, Naval Medical University, Shanghai 200003, People's Republic of China
| | - Jiangang Chen
- Shanghai Key Laboratory of Multidimensional Information Processing, East China Normal University, Shanghai 200241, People's Republic of China
| | - Dean Ta
- Department of Rehabilitation Medicine, Huashan Hospital, Fudan University, Shanghai 200040, People's Republic of China
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Mika S, Gola W, Gil-Mika M, Wilk M, Misiołek H. Overview of artificial intelligence in point-of-care ultrasound. New horizons for respiratory system diagnoses. Anaesthesiol Intensive Ther 2024; 56:1-8. [PMID: 38741438 PMCID: PMC11022635 DOI: 10.5114/ait.2024.136784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2023] [Accepted: 01/24/2024] [Indexed: 05/16/2024] Open
Abstract
Throughout the past decades ultrasonography did not prove to be a procedure of choice if regarded as part of the routine bedside examination. The reason was the assumption defining the lungs and the bone structures as impenetrable by ultrasound. Only during the recent several years has the approach to the use of such tool in clinical daily routines changed dramatically to offer so-called point-of-care ultrasonography (POCUS). Both vertical and horizontal artefacts became valuable sources of information about the patient's clinical condition, assisting therefore the medical practitioner in differential diagnosis and monitoring of the patient. What is important is that the information is delivered in real time, and the procedure itself is non-invasive. The next stage marking the progress made in this area of diagnostic imaging is the development of arti-ficial intelligence (AI) based on machine learning algorithms. This article is intended to present the available, innovative solutions of the ultrasound systems, including Smart B-line technology, to ensure automatic identification process, as well as interpretation of B-lines in the given lung area of the examined patient. The article sums up the state of the art in ultrasound artefacts and AI applied in POCUS.
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Affiliation(s)
- Sławomir Mika
- Medica Co. Ltd. (Upper Silesian School of Ultrasonography), Poland
| | - Wojciech Gola
- Collegium Medicum, Jan Kochanowski University of Kielce, St. Luke Specialist Hospital in Końskie, Poland
| | | | - Mateusz Wilk
- Collegium Medicum, WSB University, Dąbrowa Górnicza, Poland
| | - Hanna Misiołek
- Department of Anaesthesiology and Critical Care, School of Medicine with the Division of Dentistry in Zabrze, Poland
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3
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Lucassen RT, Jafari MH, Duggan NM, Jowkar N, Mehrtash A, Fischetti C, Bernier D, Prentice K, Duhaime EP, Jin M, Abolmaesumi P, Heslinga FG, Veta M, Duran-Mendicuti MA, Frisken S, Shyn PB, Golby AJ, Boyer E, Wells WM, Goldsmith AJ, Kapur T. Deep Learning for Detection and Localization of B-Lines in Lung Ultrasound. IEEE J Biomed Health Inform 2023; 27:4352-4361. [PMID: 37276107 PMCID: PMC10540221 DOI: 10.1109/jbhi.2023.3282596] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Lung ultrasound (LUS) is an important imaging modality used by emergency physicians to assess pulmonary congestion at the patient bedside. B-line artifacts in LUS videos are key findings associated with pulmonary congestion. Not only can the interpretation of LUS be challenging for novice operators, but visual quantification of B-lines remains subject to observer variability. In this work, we investigate the strengths and weaknesses of multiple deep learning approaches for automated B-line detection and localization in LUS videos. We curate and publish, BEDLUS, a new ultrasound dataset comprising 1,419 videos from 113 patients with a total of 15,755 expert-annotated B-lines. Based on this dataset, we present a benchmark of established deep learning methods applied to the task of B-line detection. To pave the way for interpretable quantification of B-lines, we propose a novel "single-point" approach to B-line localization using only the point of origin. Our results show that (a) the area under the receiver operating characteristic curve ranges from 0.864 to 0.955 for the benchmarked detection methods, (b) within this range, the best performance is achieved by models that leverage multiple successive frames as input, and (c) the proposed single-point approach for B-line localization reaches an F 1-score of 0.65, performing on par with the inter-observer agreement. The dataset and developed methods can facilitate further biomedical research on automated interpretation of lung ultrasound with the potential to expand the clinical utility.
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Xing W, Li G, He C, Huang Q, Cui X, Li Q, Li W, Chen J, Ta D. Automatic detection of A-line in lung ultrasound images using deep learning and image processing. Med Phys 2023; 50:330-343. [PMID: 35950481 DOI: 10.1002/mp.15908] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2022] [Revised: 06/29/2022] [Accepted: 07/30/2022] [Indexed: 01/25/2023] Open
Abstract
BACKGROUND Auxiliary diagnosis and monitoring of lung diseases based on lung ultrasound (LUS) images is important clinical research. A-line is one of the most common indicators of LUS that can offer support for the assessment of lung diseases. A traditional A-line detection method mainly relies on experienced clinicians, which is inefficient and cannot meet the needs of these areas with backward medical level. Therefore, how to realize the automatic detection of A-line in LUS image is important. PURPOSE In order to solve the disadvantages of traditional A-line detection methods, realize automatic and accurate detection, and provide theoretical support for clinical application, we proposed a novel A-line detection method for LUS images with different probe types in this paper. METHODS First, the improved Faster R-CNN model with a selection strategy of localization box was designed to accurately locate the pleural line. Then, the LUS image below the pleural line was segmented for independent analysis excluding the influence of other similar structures. Next, image-processing methods based on total variation, matched filter, and gray difference were applied to achieve the automatic A-line detection. Finally, the "depth" index was designed to verify the accuracy by judging whether the automatic measurement results belong to corresponding manual results (±5%). In experiments, 3000 convex array LUS images were used for training and validating the improved pleural line localization model by five-fold cross validation. 850 convex array LUS images and 1080 linear array LUS images were used for testing the trained pleural line localization model and the proposed image-processing-based A-line detection method. The accuracy analysis, error statistics, and Harsdorff distance were employed to evaluate the experimental results. RESULTS After 100 epochs, the mean loss value of training and validation set of improved Faster R-CNN model reached 0.6540 and 0.7882, with the validation accuracy of 98.70%. The trained pleural line localization model was applied in the testing set of convex and linear probes and reached the accuracy of 97.88% and 97.11%, respectively, which were 3.83% and 8.70% higher than the original Faster R-CNN model. The accuracy, sensitivity, and specificity of A-line detection reached 95.41%, 0.9244%, 0.9875%, and 94.63%, 0.9230%, and 0.9766% for convex and linear probes, respectively. Compared to the experienced clinicians' results, the mean value and p value of depth error were 1.5342 ± 1.2097 and 0.9021, respectively, and the Harsdorff distance was 5.7305 ± 1.8311. In addition, the accumulated accuracy of the two-stage experiment (pleural line localization and A-line detection) was calculated as the final accuracy of the whole A-line detection system. They were 93.39% and 91.90% for convex and linear probes, respectively, which were higher than these previous methods. CONCLUSIONS The proposed method combining image processing and deep learning can automatically and accurately detect A-line in LUS images with different probe types, which has important application value for clinical diagnosis.
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Affiliation(s)
- Wenyu Xing
- Center for Biomedical Engineering, School of Information Science and Technology, Fudan University, Shanghai, China.,Human Phenome Institute, Fudan University, Shanghai, China
| | - Guannan Li
- Shanghai Key Laboratory of Multidimensional Information Processing, East China Normal University, Shanghai, China
| | - Chao He
- Department of Emergency and Critical Care, Changzheng Hospital, Naval Medical University, Shanghai, China
| | - Qiming Huang
- School of Advanced Computing and Artificial Intelligence, Xi'an Jiaotong-liverpool University, Suzhou, China
| | - Xulei Cui
- Department of Anesthesiology, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences, Beijing, China
| | - Qingli Li
- Shanghai Key Laboratory of Multidimensional Information Processing, East China Normal University, Shanghai, China
| | - Wenfang Li
- Department of Emergency and Critical Care, Changzheng Hospital, Naval Medical University, Shanghai, China
| | - Jiangang Chen
- Shanghai Key Laboratory of Multidimensional Information Processing, East China Normal University, Shanghai, China.,Engineering Research Center of Traditional Chinese Medicine Intelligent Rehabilitation, Ministry of Education, Shanghai, China
| | - Dean Ta
- Center for Biomedical Engineering, School of Information Science and Technology, Fudan University, Shanghai, China.,Department of Rehabilitation Medicine, Huashan Hospital, Fudan University, Shanghai, China
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Parri N, Allinovi M, Giacalone M, Corsini I. To B or not to B. The rationale for quantifying B-lines in pediatric lung diseases. Pediatr Pulmonol 2023; 58:9-15. [PMID: 36253340 DOI: 10.1002/ppul.26185] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/11/2021] [Revised: 09/16/2022] [Accepted: 09/20/2022] [Indexed: 01/11/2023]
Abstract
Lung ultrasound (LUS) is emerging as adjunct tool to be used during clinical assessment. Among the different hallmarks of LUS, B-lines are well known artifacts, which are not correlated with identifiable structures, but which can be used for pathological classification. The presence of multiple B-lines is a sonographic sign of lung interstitial syndrome. It has been demonstrated in adults that there is a direct correlation between the number of B-lines and the severity of the interstitial involvement of lung disease. Counting B-lines is an attempt to enrich the clinical assessment and clinical information, beyond obtaining a simple dichotomous answer. Semiquantitative or quantitative B-line assessment has been shown to correlate with fluid overload and demonstrated prognostic implications in specific neonatal and pediatric conditions. LUS with quantitative B-lines assessment is promising. Current evidence allows for quantification of B-lines in a limited number of neonatal and pediatric diseases.
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Affiliation(s)
- Niccolò Parri
- Department of Emergency Medicine and Trauma Center, Meyer University Children's Hospital, Florence, Italy
| | - Marco Allinovi
- Nephrology, Dialysis and Transplantation Unit, Careggi University Hospital, Florence, Italy
| | - Martina Giacalone
- Department of Emergency Medicine and Trauma Center, Meyer University Children's Hospital, Florence, Italy
| | - Iuri Corsini
- Division of Neonatology, Careggi University Hospital of Florence, Florence, Italy
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Yang T, Karakus O, Anantrasirichai N, Achim A. Current Advances in Computational Lung Ultrasound Imaging: A Review. IEEE TRANSACTIONS ON ULTRASONICS, FERROELECTRICS, AND FREQUENCY CONTROL 2023; 70:2-15. [PMID: 36355735 DOI: 10.1109/tuffc.2022.3221682] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
In the field of biomedical imaging, ultrasonography has become common practice, and used as an important auxiliary diagnostic tool with unique advantages, such as being non-ionizing and often portable. This article reviews the state-of-the-art in medical ultrasound (US) image processing and in particular its applications in the examination of the lungs. First, we briefly introduce the basis of lung US (LUS) examination. We focus on (i) the characteristics of lung ultrasonography and (ii) its ability to detect a variety of diseases through the identification of various artifacts exhibiting on LUS images. We group medical US image computing methods into two categories: 1) model-based methods and 2) data-driven methods. We particularly discuss inverse problem-based methods exploited in US image despeckling, deconvolution, and line artifacts detection for the former, while we exemplify various works based on deep/machine learning (ML), which exploit various network architectures through supervised, weakly supervised, and unsupervised learning for the data-driven approaches.
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7
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Mento F, Khan U, Faita F, Smargiassi A, Inchingolo R, Perrone T, Demi L. State of the Art in Lung Ultrasound, Shifting from Qualitative to Quantitative Analyses. ULTRASOUND IN MEDICINE & BIOLOGY 2022; 48:2398-2416. [PMID: 36155147 PMCID: PMC9499741 DOI: 10.1016/j.ultrasmedbio.2022.07.007] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2022] [Revised: 07/12/2022] [Accepted: 07/15/2022] [Indexed: 05/27/2023]
Abstract
Lung ultrasound (LUS) has been increasingly expanding since the 1990s, when the clinical relevance of vertical artifacts was first reported. However, the massive spread of LUS is only recent and is associated with the coronavirus disease 2019 (COVID-19) pandemic, during which semi-quantitative computer-aided techniques were proposed to automatically classify LUS data. In this review, we discuss the state of the art in LUS, from semi-quantitative image analysis approaches to quantitative techniques involving the analysis of radiofrequency data. We also discuss recent in vitro and in silico studies, as well as research on LUS safety. Finally, conclusions are drawn highlighting the potential future of LUS.
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Affiliation(s)
- Federico Mento
- Department of Information Engineering and Computer Science, University of Trento, Trento, Italy
| | - Umair Khan
- Department of Information Engineering and Computer Science, University of Trento, Trento, Italy
| | - Francesco Faita
- Institute of Clinical Physiology, National Research Council, Pisa, Italy
| | - Andrea Smargiassi
- Department of Cardiovascular and Thoracic Sciences, Pulmonary Medicine Unit, Fondazione Policlinico Universitario Agostino Gemelli IRCCS, Rome, Italy
| | - Riccardo Inchingolo
- Department of Cardiovascular and Thoracic Sciences, Pulmonary Medicine Unit, Fondazione Policlinico Universitario Agostino Gemelli IRCCS, Rome, Italy
| | | | - Libertario Demi
- Department of Information Engineering and Computer Science, University of Trento, Trento, Italy.
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8
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Frank O, Schipper N, Vaturi M, Soldati G, Smargiassi A, Inchingolo R, Torri E, Perrone T, Mento F, Demi L, Galun M, Eldar YC, Bagon S. Integrating Domain Knowledge Into Deep Networks for Lung Ultrasound With Applications to COVID-19. IEEE TRANSACTIONS ON MEDICAL IMAGING 2022; 41:571-581. [PMID: 34606447 PMCID: PMC9014480 DOI: 10.1109/tmi.2021.3117246] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2021] [Revised: 09/26/2021] [Accepted: 09/29/2021] [Indexed: 05/18/2023]
Abstract
Lung ultrasound (LUS) is a cheap, safe and non-invasive imaging modality that can be performed at patient bed-side. However, to date LUS is not widely adopted due to lack of trained personnel required for interpreting the acquired LUS frames. In this work we propose a framework for training deep artificial neural networks for interpreting LUS, which may promote broader use of LUS. When using LUS to evaluate a patient's condition, both anatomical phenomena (e.g., the pleural line, presence of consolidations), as well as sonographic artifacts (such as A- and B-lines) are of importance. In our framework, we integrate domain knowledge into deep neural networks by inputting anatomical features and LUS artifacts in the form of additional channels containing pleural and vertical artifacts masks along with the raw LUS frames. By explicitly supplying this domain knowledge, standard off-the-shelf neural networks can be rapidly and efficiently finetuned to accomplish various tasks on LUS data, such as frame classification or semantic segmentation. Our framework allows for a unified treatment of LUS frames captured by either convex or linear probes. We evaluated our proposed framework on the task of COVID-19 severity assessment using the ICLUS dataset. In particular, we finetuned simple image classification models to predict per-frame COVID-19 severity score. We also trained a semantic segmentation model to predict per-pixel COVID-19 severity annotations. Using the combined raw LUS frames and the detected lines for both tasks, our off-the-shelf models performed better than complicated models specifically designed for these tasks, exemplifying the efficacy of our framework.
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9
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Wang Y, Zhang Y, He Q, Liao H, Luo J. Quantitative Analysis of Pleural Line and B-Lines in Lung Ultrasound Images for Severity Assessment of COVID-19 Pneumonia. IEEE TRANSACTIONS ON ULTRASONICS, FERROELECTRICS, AND FREQUENCY CONTROL 2022; 69:73-83. [PMID: 34428140 PMCID: PMC8905613 DOI: 10.1109/tuffc.2021.3107598] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2021] [Accepted: 08/21/2021] [Indexed: 06/12/2023]
Abstract
Specific patterns of lung ultrasound (LUS) images are used to assess the severity of coronavirus disease 2019 (COVID-19) pneumonia, while such assessment is mainly based on clinicians' qualitative and subjective observations. In this study, we quantitatively analyze the LUS images to assess the severity of COVID-19 pneumonia by characterizing the patterns related to the pleural line (PL) and B-lines (BLs). Twenty-seven patients with COVID-19 pneumonia, including 13 moderate cases, seven severe cases, and seven critical cases, are enrolled. Features related to the PL, including the thickness (TPL) and roughness of the PL (RPL), and the mean (MPLI) and standard deviation (SDPLI) of the PL intensities are extracted from the LUS images. Features related to the BLs, including the number (NBL), accumulated width (AWBL), attenuation coefficient (ACBL), and accumulated intensity (AIBL) of BLs, are also extracted. The correlations of these features with the disease severity are evaluated. The performances of the binary severe/non-severe classification are assessed for each feature and support vector machine (SVM) classifiers with various combinations of features as input. Several features, including the RPL, NBL, AWBL, and AIBL, show significant correlations with disease severity (all ). The classification performance is optimal using the SVM classifier using all the features as input (area under the receiver operating characteristic (ROC) curve = 0.96, sensitivity = 0.93, and specificity = 1). These findings demonstrate that the proposed method may be a promising tool for automatic grading diagnosis and follow-up of patients with COVID-19 pneumonia.
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Affiliation(s)
- Yuanyuan Wang
- Department of Biomedical EngineeringSchool of MedicineTsinghua UniversityBeijing100084China
| | - Yao Zhang
- Department of UltrasoundBeijing Ditan HospitalCapital Medical UniversityBeijing100015China
| | - Qiong He
- Department of Biomedical EngineeringSchool of MedicineTsinghua UniversityBeijing100084China
| | - Hongen Liao
- Department of Biomedical EngineeringSchool of MedicineTsinghua UniversityBeijing100084China
| | - Jianwen Luo
- Department of Biomedical EngineeringSchool of MedicineTsinghua UniversityBeijing100084China
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10
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Roshankhah R, Karbalaeisadegh Y, Greer H, Mento F, Soldati G, Smargiassi A, Inchingolo R, Torri E, Perrone T, Aylward S, Demi L, Muller M. Investigating training-test data splitting strategies for automated segmentation and scoring of COVID-19 lung ultrasound images. THE JOURNAL OF THE ACOUSTICAL SOCIETY OF AMERICA 2021; 150:4118. [PMID: 34972274 PMCID: PMC8684042 DOI: 10.1121/10.0007272] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2021] [Revised: 09/21/2021] [Accepted: 09/23/2021] [Indexed: 05/18/2023]
Abstract
Ultrasound in point-of-care lung assessment is becoming increasingly relevant. This is further reinforced in the context of the COVID-19 pandemic, where rapid decisions on the lung state must be made for staging and monitoring purposes. The lung structural changes due to severe COVID-19 modify the way ultrasound propagates in the parenchyma. This is reflected by changes in the appearance of the lung ultrasound images. In abnormal lungs, vertical artifacts known as B-lines appear and can evolve into white lung patterns in the more severe cases. Currently, these artifacts are assessed by trained physicians, and the diagnosis is qualitative and operator dependent. In this article, an automatic segmentation method using a convolutional neural network is proposed to automatically stage the progression of the disease. 1863 B-mode images from 203 videos obtained from 14 asymptomatic individual,14 confirmed COVID-19 cases, and 4 suspected COVID-19 cases were used. Signs of lung damage, such as the presence and extent of B-lines and white lung areas, are manually segmented and scored from zero to three (most severe). These manually scored images are considered as ground truth. Different test-training strategies are evaluated in this study. The results shed light on the efficient approaches and common challenges associated with automatic segmentation methods.
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Affiliation(s)
- Roshan Roshankhah
- Department of Mechanical and Aerospace Engineering, North Carolina State University, Raleigh, North Carolina 27606, USA
| | | | | | - Federico Mento
- Ultrasound Laboratory, University of Trento, Trento, Italy
| | - Gino Soldati
- Azienda USL Toscana nord ovest Sede di Lucca, Diagnostic and Interventional Ultrasound Unit Lucca, Toscana, Italy
| | - Andrea Smargiassi
- Pulmonary Medicine Unit, Department of Medical and Surgical Sciences, Fondazione Policlinico Universitario Agostino Gemelli IRCCS. Roma, Lazio, Italy
| | - Riccardo Inchingolo
- Pulmonary Medicine Unit, Department of Medical and Surgical Sciences, Fondazione Policlinico Universitario Agostino Gemelli IRCCS. Roma, Lazio, Italy
| | | | - Tiziano Perrone
- Department of Internal Medicine, Istituto di Ricovero e Cura a Carattere Scientifico, San Matteo, Pavia, Italy
| | | | | | - Marie Muller
- Department of Mechanical and Aerospace Engineering, North Carolina State University, Raleigh, North Carolina 27606, USA
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Bassiouny R, Mohamed A, Umapathy K, Khan N. An Interpretable Object Detection-Based Model For The Diagnosis Of Neonatal Lung Diseases Using Ultrasound Images. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2021; 2021:3029-3034. [PMID: 34891882 DOI: 10.1109/embc46164.2021.9630169] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Over the last few decades, Lung Ultrasound (LUS) has been increasingly used to diagnose and monitor different lung diseases in neonates. It is a noninvasive tool that allows a fast bedside examination while minimally handling the neonate. Acquiring a LUS scan is easy, but understanding the artifacts concerned with each respiratory disease is challenging. Mixed artifact patterns found in different respiratory diseases may limit LUS readability by the operator. While machine learning (ML), especially deep learning can assist in automated analysis, simply feeding the ultrasound images to an ML model for diagnosis is not enough to earn the trust of medical professionals. The algorithm should output LUS features that are familiar to the operator instead. Therefore, in this paper we present a unique approach for extracting seven meaningful LUS features that can be easily associated with a specific pathological lung condition: Normal pleura, irregular pleura, thick pleura, A- lines, Coalescent B-lines, Separate B-lines and Consolidations. These artifacts can lead to early prediction of infants developing later respiratory distress symptoms. A single multi-class region proposal-based object detection model faster-RCNN (fRCNN) was trained on lower posterior lung ultrasound videos to detect these LUS features which are further linked to four common neonatal diseases. Our results show that fRCNN surpasses single stage models such as RetinaNet and can successfully detect the aforementioned LUS features with a mean average precision of 86.4%. Instead of a fully automatic diagnosis from images without any interpretability, detection of such LUS features leave the ultimate control of diagnosis to the clinician, which can result in a more trustworthy intelligent system.
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12
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Diaz-Escobar J, Ordóñez-Guillén NE, Villarreal-Reyes S, Galaviz-Mosqueda A, Kober V, Rivera-Rodriguez R, Lozano Rizk JE. Deep-learning based detection of COVID-19 using lung ultrasound imagery. PLoS One 2021; 16:e0255886. [PMID: 34388187 PMCID: PMC8363024 DOI: 10.1371/journal.pone.0255886] [Citation(s) in RCA: 35] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2021] [Accepted: 07/27/2021] [Indexed: 01/02/2023] Open
Abstract
BACKGROUND The COVID-19 pandemic has exposed the vulnerability of healthcare services worldwide, especially in underdeveloped countries. There is a clear need to develop novel computer-assisted diagnosis tools to provide rapid and cost-effective screening in places where massive traditional testing is not feasible. Lung ultrasound is a portable, easy to disinfect, low cost and non-invasive tool that can be used to identify lung diseases. Computer-assisted analysis of lung ultrasound imagery is a relatively recent approach that has shown great potential for diagnosing pulmonary conditions, being a viable alternative for screening and diagnosing COVID-19. OBJECTIVE To evaluate and compare the performance of deep-learning techniques for detecting COVID-19 infections from lung ultrasound imagery. METHODS We adapted different pre-trained deep learning architectures, including VGG19, InceptionV3, Xception, and ResNet50. We used the publicly available POCUS dataset comprising 3326 lung ultrasound frames of healthy, COVID-19, and pneumonia patients for training and fine-tuning. We conducted two experiments considering three classes (COVID-19, pneumonia, and healthy) and two classes (COVID-19 versus pneumonia and COVID-19 versus non-COVID-19) of predictive models. The obtained results were also compared with the POCOVID-net model. For performance evaluation, we calculated per-class classification metrics (Precision, Recall, and F1-score) and overall metrics (Accuracy, Balanced Accuracy, and Area Under the Receiver Operating Characteristic Curve). Lastly, we performed a statistical analysis of performance results using ANOVA and Friedman tests followed by post-hoc analysis using the Wilcoxon signed-rank test with the Holm's step-down correction. RESULTS InceptionV3 network achieved the best average accuracy (89.1%), balanced accuracy (89.3%), and area under the receiver operating curve (97.1%) for COVID-19 detection from bacterial pneumonia and healthy lung ultrasound data. The ANOVA and Friedman tests found statistically significant performance differences between models for accuracy, balanced accuracy and area under the receiver operating curve. Post-hoc analysis showed statistically significant differences between the performance obtained with the InceptionV3-based model and POCOVID-net, VGG19-, and ResNet50-based models. No statistically significant differences were found in the performance obtained with InceptionV3- and Xception-based models. CONCLUSIONS Deep learning techniques for computer-assisted analysis of lung ultrasound imagery provide a promising avenue for COVID-19 screening and diagnosis. Particularly, we found that the InceptionV3 network provides the most promising predictive results from all AI-based techniques evaluated in this work. InceptionV3- and Xception-based models can be used to further develop a viable computer-assisted screening tool for COVID-19 based on ultrasound imagery.
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Affiliation(s)
- Julia Diaz-Escobar
- CICESE Research Center, Ensenada, Baja California, México
- Faculty of Science, UABC, Ensenada, Baja California, México
| | | | | | | | - Vitaly Kober
- CICESE Research Center, Ensenada, Baja California, México
- Department of Mathematics, Chelyabinsk State University, Chelyabinsk, Russia
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13
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Johannessen Ø, Claggett B, Lewis EF, Groarke JD, Swamy V, Lindner M, Solomon SD, Platz E. A-lines and B-lines in patients with acute heart failure. EUROPEAN HEART JOURNAL-ACUTE CARDIOVASCULAR CARE 2021; 10:909-917. [PMID: 34160009 DOI: 10.1093/ehjacc/zuab046] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2021] [Revised: 04/27/2021] [Accepted: 06/02/2021] [Indexed: 11/14/2022]
Abstract
AIMS Lung ultrasound (LUS) relies on detecting artefacts, including A-lines and B-lines, when assessing dyspnoeic patients. A-lines are horizontal artefacts and characterize normal lung, whereas multiple vertical B-lines are associated with increased lung density. We sought to assess the prevalence of A-lines and B-lines in patients with acute heart failure (AHF) and examine their clinical correlates and their relationship with outcomes. METHODS AND RESULTS In a prospective cohort study of adults with AHF, eight-zone LUS and echocardiography were performed early during the hospitalization and pre-discharge at an imaging depth of 18 cm. A- and B-lines were analysed separately off-line, blinded to clinical and outcome data. Of 164 patients [median age 71 years, 61% men, mean ejection fraction (EF) 40%], the sum of A-lines at baseline ranged from 0 to 19 and B-line number from 0 to 36. One hundred and fifty-six patients (95%) had co-existing A-lines and B-lines at baseline. Lower body mass index and lower chest wall thickness were associated with a higher number of A-lines (P trend < 0.001 for both). In contrast to B-lines, there was no significant change in the number of A-lines from baseline to discharge (median 6 vs. 5, P = 0.80). While B-lines were associated with 90-day HF readmission or death, A-lines were not [HR 1.67, 95% confidence interval (CI) 1.11-2.51 vs. HR 0.97, 95% CI 0.65-1.43]. CONCLUSIONS A-lines and B-lines on LUS co-exist in the vast majority of hospitalized patients with AHF. In contrast to B-lines, A-lines were not associated with adverse outcomes.
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Affiliation(s)
- Øyvind Johannessen
- Faculty of Medicine,Institute of Clinical Medicine, University of Oslo, Oslo 0316, Norway.,Department of Cardiology, Division of Medicine, Akershus University Hospital, Lørenskog, Norway
| | - Brian Claggett
- Cardiovascular Division, Brigham and Women's Hospital, 360 Longwood Ave., 7th Floor, Boston, MA 02115, USA.,Harvard Medical School, Boston, MA 02115, USA
| | | | - John D Groarke
- Cardiovascular Division, Brigham and Women's Hospital, 360 Longwood Ave., 7th Floor, Boston, MA 02115, USA.,Harvard Medical School, Boston, MA 02115, USA
| | - Varsha Swamy
- Cardiovascular Division, Brigham and Women's Hospital, 360 Longwood Ave., 7th Floor, Boston, MA 02115, USA
| | | | - Scott D Solomon
- Cardiovascular Division, Brigham and Women's Hospital, 360 Longwood Ave., 7th Floor, Boston, MA 02115, USA.,Harvard Medical School, Boston, MA 02115, USA
| | - Elke Platz
- Cardiovascular Division, Brigham and Women's Hospital, 360 Longwood Ave., 7th Floor, Boston, MA 02115, USA.,Harvard Medical School, Boston, MA 02115, USA
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14
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Wiley BM, Zhou B, Pandompatam G, Zhou J, Kucuk HO, Zhang X. Lung Ultrasound Surface Wave Elastography for Assessing Patients With Pulmonary Edema. IEEE Trans Biomed Eng 2021; 68:3417-3423. [PMID: 33848239 DOI: 10.1109/tbme.2021.3072891] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
B-Mode ultrasound insonation of lungs that are dense with extravascular lung water (EVLW) produces characteristic reverberation artifacts termed B-lines. The number of B-lines present demonstrates reasonable correlation to the amount of EVLW. However, analysis of B-line artifacts generated by this modality is semi-quantitative relying on visual interpretation, and as a result, can be subject to inter-observer variability. The purpose of this study was to translate the use of a novel, quantitative lung ultrasound surface wave elastography technique (LUSWE) into the bedside assessment of pulmonary edema in patients admitted with acute congestive heart failure. B-mode lung ultrasound and LUSWE assessment of the lungs were performed using anterior and lateral intercostal spaces in the supine patient. 14 patients were evaluated at admission with reassessment performed 1-2 days after initiation of diuretic therapy. Each exam recorded the total lung B-lines, lung surface wave speeds (at 100, 150, and 200 Hz) and net fluid balance. The patient cohort experienced effective diuresis (average net fluid balance of negative 2.1 liters) with corresponding decrease in pulmonary edema visualized by B-mode ultrasound (average decrease of 13 B-Lines). In addition, LUSWE demonstrated a statistically significant reduction in the magnitude of wave speed from admission to follow-up. The reduction in lung surface wave speed suggests a decrease in lung stiffness (decreased elasticity) mediated by successful reduction of pulmonary edema. In summary, LUSWE is a noninvasive technique for quantifying elastic properties of superficial lung tissue that may prove useful as a diagnostic test, performed at the bedside, for the quantitative assessment of pulmonary edema.
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15
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McDermott C, Łącki M, Sainsbury B, Henry J, Filippov M, Rossa C. Sonographic Diagnosis of COVID-19: A Review of Image Processing for Lung Ultrasound. Front Big Data 2021; 4:612561. [PMID: 33748752 PMCID: PMC7968725 DOI: 10.3389/fdata.2021.612561] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2020] [Accepted: 01/14/2021] [Indexed: 12/24/2022] Open
Abstract
The sustained increase in new cases of COVID-19 across the world and potential for subsequent outbreaks call for new tools to assist health professionals with early diagnosis and patient monitoring. Growing evidence around the world is showing that lung ultrasound examination can detect manifestations of COVID-19 infection. Ultrasound imaging has several characteristics that make it ideally suited for routine use: small hand-held systems can be contained inside a protective sheath, making it easier to disinfect than X-ray or computed tomography equipment; lung ultrasound allows triage of patients in long term care homes, tents or other areas outside of the hospital where other imaging modalities are not available; and it can determine lung involvement during the early phases of the disease and monitor affected patients at bedside on a daily basis. However, some challenges still remain with routine use of lung ultrasound. Namely, current examination practices and image interpretation are quite challenging, especially for unspecialized personnel. This paper reviews how lung ultrasound (LUS) imaging can be used for COVID-19 diagnosis and explores different image processing methods that have the potential to detect manifestations of COVID-19 in LUS images. Then, the paper reviews how general lung ultrasound examinations are performed before addressing how COVID-19 manifests itself in the images. This will provide the basis to study contemporary methods for both segmentation and classification of lung ultrasound images. The paper concludes with a discussion regarding practical considerations of lung ultrasound image processing use and draws parallels between different methods to allow researchers to decide which particular method may be best considering their needs. With the deficit of trained sonographers who are working to diagnose the thousands of people afflicted by COVID-19, a partially or totally automated lung ultrasound detection and diagnosis tool would be a major asset to fight the pandemic at the front lines.
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Affiliation(s)
- Conor McDermott
- Faculty of Engineering and Applied Science, Ontario Tech University, Oshawa, ON, Canada
| | - Maciej Łącki
- Faculty of Engineering and Applied Science, Ontario Tech University, Oshawa, ON, Canada
| | | | | | | | - Carlos Rossa
- Faculty of Engineering and Applied Science, Ontario Tech University, Oshawa, ON, Canada
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16
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Chen J, Li J, He C, Li W, Li Q. Automated Pleural Line Detection Based on Radon Transform Using Ultrasound. ULTRASONIC IMAGING 2021; 43:19-28. [PMID: 33355516 DOI: 10.1177/0161734620976408] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
It is of vital importance to identify the pleural line when performing lung ultrasound, as the pleural line not only indicates the interface between the chest wall and lung, but offers additional diagnostic information. In the current clinical practice, the pleural line is visually detected and evaluated by clinicians, which requires experiences and skills with challenges for the novice. In this study, we developed a computer-aided technique for automated pleural line detection using ultrasound. The method first utilized the Radon transform to detect line objects in the ultrasound images. The relation of the body mass index and chest wall thickness was then applied to estimate the range of the pleural thickness, based on which the pleural line was detected together with the consideration of the ultrasonic properties of the pleural line. The proposed method was validated by testing 83 ultrasound data sets collected from 21 pneumothorax patients. The pleural lines were successfully identified in 76 data sets by the automated method (successful detection rate 91.6%). In those successful cases, the depths of the pleural lines measured by the automated method agreed with those manually measured as confirmed with the Bland-Altman test. The measurement errors were below 5% in terms of the pleural line depth. As a conclusion, the proposed method could detect the pleural line in an automated manner in the defined data set. In addition, the method may potentially act as an alternative to visual inspection after further tests on more diverse data sets are performed in future studies.
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Affiliation(s)
- Jiangang Chen
- Shanghai Key Laboratory of Multidimensional Information Processing, East China Normal University, Shanghai, China
| | - Jiawei Li
- Department of Medical Ultrasound, Fudan University Shanghai Cancer Center, Shanghai, China
- Department of Oncology, Shanghai Medical College, Fudan University, Shanghai, China
| | - Chao He
- Department of Emergency and Critical Care, Changzheng Hospital, Naval Medical University, Shanghai, China
| | - Wenfang Li
- Department of Emergency and Critical Care, Changzheng Hospital, Naval Medical University, Shanghai, China
| | - Qingli Li
- Shanghai Key Laboratory of Multidimensional Information Processing, East China Normal University, Shanghai, China
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17
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Carrer L, Donini E, Marinelli D, Zanetti M, Mento F, Torri E, Smargiassi A, Inchingolo R, Soldati G, Demi L, Bovolo F, Bruzzone L. Automatic Pleural Line Extraction and COVID-19 Scoring From Lung Ultrasound Data. IEEE TRANSACTIONS ON ULTRASONICS, FERROELECTRICS, AND FREQUENCY CONTROL 2020; 67:2207-2217. [PMID: 32746195 PMCID: PMC8544930 DOI: 10.1109/tuffc.2020.3005512] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2020] [Accepted: 06/23/2020] [Indexed: 05/18/2023]
Abstract
Recent works highlighted the significant potential of lung ultrasound (LUS) imaging in the management of subjects affected by COVID-19. In general, the development of objective, fast, and accurate automatic methods for LUS data evaluation is still at an early stage. This is particularly true for COVID-19 diagnostic. In this article, we propose an automatic and unsupervised method for the detection and localization of the pleural line in LUS data based on the hidden Markov model and Viterbi Algorithm. The pleural line localization step is followed by a supervised classification procedure based on the support vector machine (SVM). The classifier evaluates the healthiness level of a patient and, if present, the severity of the pathology, i.e., the score value for each image of a given LUS acquisition. The experiments performed on a variety of LUS data acquired in Italian hospitals with both linear and convex probes highlight the effectiveness of the proposed method. The average overall accuracy in detecting the pleura is 84% and 94% for convex and linear probes, respectively. The accuracy of the SVM classification in correctly evaluating the severity of COVID-19 related pleural line alterations is about 88% and 94% for convex and linear probes, respectively. The results as well as the visualization of the detected pleural line and the predicted score chart, provide a significant support to medical staff for further evaluating the patient condition.
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Affiliation(s)
- Leonardo Carrer
- Department of Information Engineering and Computer ScienceUniversity of Trento38123TrentoItaly
| | - Elena Donini
- Center for Information and Communication TechnologyFondazione Bruno Kessler38123TrentoItaly
| | - Daniele Marinelli
- Department of Information Engineering and Computer ScienceUniversity of Trento38123TrentoItaly
| | - Massimo Zanetti
- Center for Information and Communication TechnologyFondazione Bruno Kessler38123TrentoItaly
| | - Federico Mento
- Department of Information Engineering and Computer ScienceUniversity of Trento38123TrentoItaly
| | | | - Andrea Smargiassi
- Department of Cardiovascular and Thoracic SciencesPulmonary Medicine UnitFondazione Policlinico Universitario Agostino Gemelli IRCCS00168RomeItaly
| | - Riccardo Inchingolo
- Department of Cardiovascular and Thoracic SciencesPulmonary Medicine UnitFondazione Policlinico Universitario Agostino Gemelli IRCCS00168RomeItaly
| | - Gino Soldati
- Diagnostic and Interventional Ultrasound UnitValle del Serchio General Hospital55032LuccaItaly
| | - Libertario Demi
- Department of Information Engineering and Computer ScienceUniversity of Trento38123TrentoItaly
| | - Francesca Bovolo
- Center for Information and Communication TechnologyFondazione Bruno Kessler38123TrentoItaly
| | - Lorenzo Bruzzone
- Department of Information Engineering and Computer ScienceUniversity of Trento38123TrentoItaly
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18
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Karakuş O, Anantrasirichai N, Aguersif A, Silva S, Basarab A, Achim A. Detection of Line Artifacts in Lung Ultrasound Images of COVID-19 Patients Via Nonconvex Regularization. IEEE TRANSACTIONS ON ULTRASONICS, FERROELECTRICS, AND FREQUENCY CONTROL 2020; 67:2218-2229. [PMID: 32784133 PMCID: PMC8544933 DOI: 10.1109/tuffc.2020.3016092] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2020] [Accepted: 08/07/2020] [Indexed: 05/11/2023]
Abstract
In this article, we present a novel method for line artifacts quantification in lung ultrasound (LUS) images of COVID-19 patients. We formulate this as a nonconvex regularization problem involving a sparsity-enforcing, Cauchy-based penalty function, and the inverse Radon transform. We employ a simple local maxima detection technique in the Radon transform domain, associated with known clinical definitions of line artifacts. Despite being nonconvex, the proposed technique is guaranteed to convergence through our proposed Cauchy proximal splitting (CPS) method, and accurately identifies both horizontal and vertical line artifacts in LUS images. To reduce the number of false and missed detection, our method includes a two-stage validation mechanism, which is performed in both Radon and image domains. We evaluate the performance of the proposed method in comparison to the current state-of-the-art B-line identification method, and show a considerable performance gain with 87% correctly detected B-lines in LUS images of nine COVID-19 patients.
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Affiliation(s)
- Oktay Karakuş
- Visual Information LaboratoryUniversity of BristolBristolBS1 5DDU.K
| | | | - Amazigh Aguersif
- Service de RéanimationCentre Hospitalier Universitaire (CHU) Purpan31300ToulouseFrance
| | - Stein Silva
- Service de RéanimationCentre Hospitalier Universitaire (CHU) Purpan31300ToulouseFrance
| | - Adrian Basarab
- CNRS UMR 5505Institut de Recherche en Informatique de Toulouse (IRIT), University of Toulouse31062ToulouseFrance
| | - Alin Achim
- Visual Information LaboratoryUniversity of BristolBristolBS1 5DDU.K
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19
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Ulhaq A, Born J, Khan A, Gomes DPS, Chakraborty S, Paul M. COVID-19 Control by Computer Vision Approaches: A Survey. IEEE ACCESS : PRACTICAL INNOVATIONS, OPEN SOLUTIONS 2020; 8:179437-179456. [PMID: 34812357 PMCID: PMC8545281 DOI: 10.1109/access.2020.3027685] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2020] [Accepted: 09/26/2020] [Indexed: 05/03/2023]
Abstract
The COVID-19 pandemic has triggered an urgent call to contribute to the fight against an immense threat to the human population. Computer Vision, as a subfield of artificial intelligence, has enjoyed recent success in solving various complex problems in health care and has the potential to contribute to the fight of controlling COVID-19. In response to this call, computer vision researchers are putting their knowledge base at test to devise effective ways to counter COVID-19 challenge and serve the global community. New contributions are being shared with every passing day. It motivated us to review the recent work, collect information about available research resources, and an indication of future research directions. We want to make it possible for computer vision researchers to find existing and future research directions. This survey article presents a preliminary review of the literature on research community efforts against COVID-19 pandemic.
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Affiliation(s)
- Anwaar Ulhaq
- School of Computing and MathematicsCharles Sturt UniversityPort MacquarieNSW2795Australia
| | - Jannis Born
- Department for Biosystems Science and EngineeringETH Zurich4058BaselSwitzerland
| | - Asim Khan
- College of Engineering and ScienceVictoria UniversityMelbourneVIC3011Australia
| | | | - Subrata Chakraborty
- Faculty of Engineering and Information TechnologyUniversity of Technology SydneySydneyNSW2007Australia
| | - Manoranjan Paul
- School of Computing and MathematicsCharles Sturt UniversityPort MacquarieNSW2795Australia
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20
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Demi L, Demi M, Prediletto R, Soldati G. Real-time multi-frequency ultrasound imaging for quantitative lung ultrasound - first clinical results. THE JOURNAL OF THE ACOUSTICAL SOCIETY OF AMERICA 2020; 148:998. [PMID: 32872996 DOI: 10.1121/10.0001723] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
Lung ultrasound imaging is a fast-evolving field of application for ultrasound technologies. However, most diagnoses are currently performed with imaging protocols that assume a quasi-homogeneous speed of sound in the volume of interest. When applied to the lung, due to the presence of air, this assumption is unrealistic. Consequently, diagnoses are often based on imaging artifacts and thus qualitative and subjective. In this paper, we present an image formation protocol that is capable of capturing the frequency dependence of well-known artifacts (B-lines) and visualizing it in real time, ultimately providing a quantitative assessment of the signals received from the lung. Previous in vitro studies have shown the potential of B-lines native-frequency for the characterization of bubbly medium, but this paper presents the first results on clinical data. The image formation process has been designed to work on lung tissue, and ultrasound images generated with four orthogonal bands centered at 3, 4, 5 and 6 MHz can be acquired and displayed in real time. Results show that B-lines can be characterized on the basis of their native frequency in vivo and open the way toward real-time quantitative lung ultrasound imaging.
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Affiliation(s)
- Libertario Demi
- Department of Information Engineering and Computer Science, University of Trento, Via Sommarive 9, 38123, Trento, Italy
| | - Marcello Demi
- Department of Medical Image Processing, Fondazione Toscana Gabriele Monasterio, Via Trieste 41, 56124, Pisa, Italy
| | - Renato Prediletto
- Department of Pulmonology, Fondazione Toscana Gabriele Monasterio, Via Trieste 41, 56124, Pisa, Italy
| | - Gino Soldati
- Diagnostic and Interventional Ultrasound Unit, Valle del Serchio General Hospital, Via dell'Ospedale, 3, 55032 Lucca, Italy
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21
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Anantrasirichai N, Zheng R, Selesnick I, Achim A. Image fusion via sparse regularization with non-convex penalties. Pattern Recognit Lett 2020. [DOI: 10.1016/j.patrec.2020.01.020] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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22
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van Sloun RJG, Demi L. Localizing B-Lines in Lung Ultrasonography by Weakly Supervised Deep Learning, In-Vivo Results. IEEE J Biomed Health Inform 2019; 24:957-964. [PMID: 31425126 DOI: 10.1109/jbhi.2019.2936151] [Citation(s) in RCA: 59] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Lung ultrasound (LUS) is nowadays gaining growing attention from both the clinical and technical world. Of particular interest are several imaging-artifacts, e.g., A- and B- line artifacts. While A-lines are a visual pattern which essentially represent a healthy lung surface, B-line artifacts correlate with a wide range of pathological conditions affecting the lung parenchyma. In fact, the appearance of B-lines correlates to an increase in extravascular lung water, interstitial lung diseases, cardiogenic and non-cardiogenic lung edema, interstitial pneumonia and lung contusion. Detection and localization of B-lines in a LUS video are therefore tasks of great clinical interest, with accurate, objective and timely evaluation being critical. This is particularly true in environments such as the emergency units, where timely decision may be crucial. In this work, we present and describe a method aimed at supporting clinicians by automatically detecting and localizing B-lines in an ultrasound scan. To this end, we employ modern deep learning strategies and train a fully convolutional neural network to perform this task on B-mode images of dedicated ultrasound phantoms in-vitro, and on patients in-vivo. An accuracy, sensitivity, specificity, negative and positive predictive value equal to 0.917, 0.915, 0.918, 0.950 and 0.864 were achieved in-vitro, respectively. Using a clinical system in-vivo, these statistics were 0.892, 0.871, 0.930, 0.798 and 0.958, respectively. We moreover calculate neural attention maps that visualize which components in the image triggered the network, thereby offering simultaneous weakly-supervised localization. These promising results confirm the capability of the proposed method to identify and localize the presence of B-lines in clinical lung ultrasonography.
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23
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Wang Q, Zheng R, Achim A. Super-Resolution in Optical Coherence Tomography. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2019; 2018:1-4. [PMID: 30440251 DOI: 10.1109/embc.2018.8512351] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Optical coherence tomography (OCT) is an essential medical imaging tool for retinal disease diagnosis. Nevertheless, as with all optical imaging techniques, image degradation is a very common phenomenon, affecting the quality of the images. In this paper, we address issues related to the resolution of OCT images and propose solutions based on solving inverse problems. A cost function for deconvolution and super-resolution is formulated and the alternating direction method of multiplier (ADMM) and forward-backward splitting (FBS) algorithms are then employed for its minimisation. On the one hand, the standard Ll norm regularisation with soft thresholding is compared with a total variation (TV) regularisation within an ADMM scheme. On the other hand, nonconvex regularisation is also considered via a multivariate generalisation of the minimax-concave scheme in FBS. In the latter case, the regularisation function is judiciously chosen in order to preserve the overall convexity of the cost function. To be able to evaluate our algorithms qualitatively, a number of standard images are initially used. Then, we also assess our algorithms subjectively by applying them to real OCT images of the human eye. Given that the point spread function (PSF) of OCT images is generally unknown, we also propose ways of estimating it in the deconvolution component of our methods. Our results show that the ADMM scheme with soft thresholding achieves the best performance in terms of enhancing the overall quality of OCT images.
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24
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Mojoli F, Bouhemad B, Mongodi S, Lichtenstein D. Lung Ultrasound for Critically Ill Patients. Am J Respir Crit Care Med 2019; 199:701-714. [DOI: 10.1164/rccm.201802-0236ci] [Citation(s) in RCA: 188] [Impact Index Per Article: 37.6] [Reference Citation Analysis] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023] Open
Affiliation(s)
- Francesco Mojoli
- Department of Clinical-Surgical, Diagnostic, and Pediatric Sciences, Unit of Anaesthesia and Intensive Care, University of Pavia, Pavia, Italy
- Anestesia e Rianimazione I, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico, Policlinico San Matteo, Pavia, Italy
| | - Bélaid Bouhemad
- Dijon et Université Bourgogne Franche-Comté, Lipides Nutrition Cancer Unité Mixte de Recherche 866, Dijon, France
- Département d’Anesthésie et Réanimation, Centre Hospitalier Universitaire Dijon, Dijon, France; and
| | - Silvia Mongodi
- Anestesia e Rianimazione I, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico, Policlinico San Matteo, Pavia, Italy
| | - Daniel Lichtenstein
- Medical Intensive Care Unit, Hospital Ambroise Paré, Boulogne (Paris-West University), France
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25
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Wang X, Burzynski JS, Hamilton J, Rao PS, Weitzel WF, Bull JL. Quantifying lung ultrasound comets with a convolutional neural network: Initial clinical results. Comput Biol Med 2019; 107:39-46. [PMID: 30776670 DOI: 10.1016/j.compbiomed.2019.02.002] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2018] [Revised: 02/03/2019] [Accepted: 02/03/2019] [Indexed: 01/15/2023]
Abstract
Lung ultrasound comets are "comet-tail" artifacts appearing in lung ultrasound images. They are particularly useful in detecting several lung pathologies and may indicate the amount of extravascular lung water. However, the comets are not always well defined and large variations in the counting results exist between observers. This study uses a convolutional neural network to quantify these lung ultrasound comets on a 4864-image clinical lung ultrasound dataset labeled by the authors. The neural network counted the number of comets correctly on 43.4% of the images and has an intraclass correlation (ICC) of 0.791 with respect to human counting on the test set. The ICC level indicates a higher correlation level than previously reported ICC between human observers. The neural network was then deployed and applied to a clinical 6272-image dataset. The correlation between the automated comet counts and the clinical parameters was examined. The comet counts correlate positively with the diastolic blood pressure (p = 0.047, r = 0.448), negatively with ejection fraction (p = 0.061, r = -0.513), and negatively with BMI (p = 0.009, r = -0.566). The neural network can be alternatively formulated as a diagnostic test for comet-positive images with 80.8% accuracy. The results could potentially be improved with a larger dataset and a refined approach to the neural networks used.
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Affiliation(s)
- Xianglong Wang
- Biomedical Engineering, College of Engineering, University of Michigan - Ann Arbor, Ann Arbor, MI, USA
| | - Joseph S Burzynski
- Biomedical Engineering, College of Engineering, University of Michigan - Ann Arbor, Ann Arbor, MI, USA
| | | | - Panduranga S Rao
- Division of Nephrology, Internal Medicine, University of Michigan - Ann Arbor, Ann Arbor, MI, USA
| | - William F Weitzel
- Division of Nephrology, Internal Medicine, University of Michigan - Ann Arbor, Ann Arbor, MI, USA; Ann Arbor Veteran Affairs Healthcare System, Ann Arbor, MI, USA
| | - Joseph L Bull
- Biomedical Engineering, School of Science and Engineering, Tulane University, New Orleans, LA, USA.
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26
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Moshavegh R, Hansen KL, Moller-Sorensen H, Nielsen MB, Jensen JA. Automatic Detection of B-Lines in In Vivo Lung Ultrasound. IEEE TRANSACTIONS ON ULTRASONICS, FERROELECTRICS, AND FREQUENCY CONTROL 2019; 66:309-317. [PMID: 30530325 DOI: 10.1109/tuffc.2018.2885955] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
This paper proposes an automatic method for accurate detection and visualization of B-lines in ultrasound lung scans, which provides a quantitative measure for the number of B-lines present. All the scans used in this study were acquired using a BK3000 ultrasound scanner (BK Ultrasound, Herlev, Denmark) driving a 5.5-MHz linear transducer (BK Ultrasound). Four healthy subjects and four patients, after major surgery with pulmonary edema, were scanned at four locations on each lung for B-line examination. Eight sequences of 50 frames were acquired for each subject yielding 64 sequences in total. The proposed algorithm was applied to all 3200 in-vivo lung ultrasound images. The results showed that the average number of B-lines was 0.28±0.06 (Mean±Std) in scans belonging to the patients compared to 0.03 ± 0.06 (Mean ± Std) in the healthy subjects. Also, the Mann-Whitney test showed a significant difference between the two groups with the p -value of 0.015, and indicating that the proposed algorithm was able to differentiate between the healthy volunteers and the patients. In conclusion, the method can be used to automatically and to quantitatively characterize the distribution of B-lines for diagnosing pulmonary edema.
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27
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Abstract
Dysregulation of intravascular fluid leads to chronic volume overload in children with end-stage kidney disease (ESKD). Sequelae include left ventricular hypertrophy and remodeling and impaired cardiac function. As a result, cardiovascular complications are the commonest cause of mortality in the pediatric dialysis population. The clinical need to optimize intravascular volume in children with ESKD is clear; however, its assessment and management is the most challenging aspect of the pediatric dialysis prescription. Minimizing chronic fluid overload is a key priority; however, excessive ultrafiltration is toxic to the myocardium and can precipitate intradialytic symptoms. This review outlines emerging objective techniques to enhance the assessment of fluid overload in children on dialysis and outlines evidence for current management strategies to address this clinical problem.
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