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Lee DW, Han H, Ro DH, Lee YS. Development of the machine learning model that is highly validated and easily applicable to predict radiographic knee osteoarthritis progression. J Orthop Res 2024. [PMID: 39354808 DOI: 10.1002/jor.25982] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/17/2024] [Revised: 07/24/2024] [Accepted: 09/16/2024] [Indexed: 10/03/2024]
Abstract
Many models using the aid of artificial intelligence have been recently proposed to predict the progression of knee osteoarthritis. However, previous models have not been properly validated with an external data set or have reported poor predictive performances. Therefore, the purpose of this study was to design a machine learning model for knee osteoarthritis progression, focusing on high validation quality and clinical applicability. A retrospective analysis was conducted on prospectively collected data, using the Osteoarthritis Initiative data set (5966 knees) for model development and the Multicenter Osteoarthritis Study data set (3392 knees) for validation. The analysis aimed to predict Kellgren-Lawrence grade (KLG) progression over 4-5 years in knees with initial KLG of 0, 1, or 2. Possible predictors included demographics, comorbidities, history of meniscectomy, gait speed, Western Ontario and McMaster Universities Osteoarthritis Index (WOMAC) scores, and radiological findings. The Random Forest algorithm was employed for the predictive model development. Baseline KLG, contralateral knee osteoarthritis, lateral joint space narrowing (JSN) grade, BMI, medial JSN grade, and total WOMAC score were six features selected for the model in descending order of importance. Odds ratios of baseline KLG, contralateral knee osteoarthritis, and lateral JSN grade were 1.76, 2.59, and 4.74, respectively (all p < 0.001). The area-under-the-curve of the ROC curve in the validation set was 0.76 with an accuracy of 0.68 and an F1-score of 0.56. The progression of knee osteoarthritis in 4 ~ 5 years could be well-predicted using easily available variables. This simple and validated model may aid surgeons in knee osteoarthritis patient management.
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Affiliation(s)
- Do Weon Lee
- Department of Orthopaedic Surgery, Dongguk University Ilsan Hospital, Goyang, South Korea
| | - Hyuk‐Soo Han
- Department of Orthopaedic Surgery, Seoul National University College of Medicine, Seoul, South Korea
- Department of Orthopaedic Surgery, Seoul National University Hospital, Seoul, South Korea
| | - Du Hyun Ro
- Department of Orthopaedic Surgery, Seoul National University College of Medicine, Seoul, South Korea
- Department of Orthopaedic Surgery, Seoul National University Hospital, Seoul, South Korea
- CONNECTEVE Co., Ltd, Gangnam-gu, South Korea
- Innovative Medical Technology Research Institute, Seoul National University Hospital, Seoul, South Korea
| | - Yong Seuk Lee
- Department of Orthopaedic Surgery, Seoul National University Bundang Hospital, Seongnam, South Korea
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Bennett HJ, Estler K, Valenzuela K, Weinhandl JT. Predicting Knee Joint Contact Forces During Normal Walking Using Kinematic Inputs With a Long-Short Term Neural Network. J Biomech Eng 2024; 146:081004. [PMID: 38270972 DOI: 10.1115/1.4064550] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2023] [Accepted: 01/19/2024] [Indexed: 01/26/2024]
Abstract
Knee joint contact forces are commonly estimated via surrogate measures (i.e., external knee adduction moments or musculoskeletal modeling). Despite its capabilities, modeling is not optimal for clinicians or persons with limited experience. The purpose of this study was to design a novel prediction method for knee joint contact forces that is simplistic in terms of required inputs. This study included marker trajectories and instrumented knee forces during normal walking from the "Grand Challenge" (n = 6) and "CAMS" (n = 2) datasets. Inverse kinematics were used to derive stance phase hip (sagittal, frontal, transverse), knee (sagittal, frontal), ankle (sagittal), and trunk (frontal) kinematics. A long-short term memory network (LSTM) was created using matlab to predict medial and lateral knee force waveforms using combinations of the kinematics. The Grand Challenge and CAMS datasets trained and tested the network, respectively. Musculoskeletal modeling forces were derived using static optimization and joint reaction tools in OpenSim. Waveform accuracy was determined as the proportion of variance and root-mean-square error between network predictions and in vivo data. The LSTM network was highly accurate for medial forces (R2 = 0.77, RMSE = 0.27 BW) and required only frontal hip and knee and sagittal hip and ankle kinematics. Modeled medial force predictions were excellent (R2 = 0.77, RMSE = 0.33 BW). Lateral force predictions were poor for both methods (LSTM R2 = 0.18, RMSE = 0.08 BW; modeling R2 = 0.21, RMSE = 0.54 BW). The designed LSTM network outperformed most reports of musculoskeletal modeling, including those reached in this study, revealing knee joint forces can accurately be predicted by using only kinematic input variables.
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Affiliation(s)
- Hunter J Bennett
- Neuromechanics Laboratory, Old Dominion University, 1007 Student Recreation Center, Norfolk, VA 23529
| | - Kaileigh Estler
- Department of Kinesiology, Recreation, and Sport Studies, The University of Tennessee, Knoxville, TN 37996
- University of Tennessee at Knoxville
| | - Kevin Valenzuela
- Department of Kinesiology, California State University, Long Beach, CA 90840
| | - Joshua T Weinhandl
- Department of Kinesiology, Recreation, and Sport Studies, The University of Tennessee, Knoxville, TN 37996
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Hu J, Peng J, Zhou Z, Zhao T, Zhong L, Yu K, Jiang K, Lau TS, Huang C, Lu L, Zhang X. Associating Knee Osteoarthritis Progression with Temporal-Regional Graph Convolutional Network Analysis on MR Images. J Magn Reson Imaging 2024. [PMID: 38686707 DOI: 10.1002/jmri.29412] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2024] [Revised: 04/09/2024] [Accepted: 04/10/2024] [Indexed: 05/02/2024] Open
Abstract
BACKGROUND Artificial intelligence shows promise in assessing knee osteoarthritis (OA) progression on MR images, but faces challenges in accuracy and interpretability. PURPOSE To introduce a temporal-regional graph convolutional network (TRGCN) on MR images to study the association between knee OA progression status and network outcome. STUDY TYPE Retrospective. POPULATION 194 OA progressors (mean age, 62 ± 9 years) and 406 controls (mean age, 61 ± 9 years) from the OA Initiative were randomly divided into training (80%) and testing (20%) cohorts. FIELD STRENGTH/SEQUENCE Sagittal 2D IW-TSE-FS (IW) and 3D-DESS-WE (DESS) at 3T. ASSESSMENT Anatomical subregions of cartilage, subchondral bone, meniscus, and the infrapatellar fat pad at baseline, 12-month, and 24-month were automatically segmented and served as inputs to form compartment-based graphs for a TRGCN model, which containing both regional and temporal information. The performance of models based on (i) clinical variables alone, (ii) radiologist score alone, (iii) combined features (containing i and ii), (iv) composite TRGCN (combining TRGCN, i and ii), (v) radiomics features, (vi) convolutional neural network based on Densenet-169 were compared. STATISTICAL TESTS DeLong test was performed to compare the areas under the ROC curve (AUC) of all models. Additionally, interpretability analysis was done to evaluate the contributions of individual regions. A P value <0.05 was considered significant. RESULTS The composite TRGCN outperformed all other models with AUCs of 0.841 (DESS) and 0.856 (IW) in the testing cohort (all P < 0.05). Interpretability analysis highlighted cartilage's importance over other structures (42%-45%), tibiofemoral joint's (TFJ) dominance over patellofemoral joint (PFJ) (58%-67% vs. 12%-37%), and importance scores changes in compartments over time (TFJ vs. PFJ: baseline: 44% vs. 43%, 12-month: 52% vs. 39%, 24-month: 31% vs. 48%). DATA CONCLUSION The composite TRGCN, capturing temporal and regional information, demonstrated superior discriminative ability compared with other methods, providing interpretable insights for identifying knee OA progression. LEVEL OF EVIDENCE: 4 TECHNICAL EFFICACY Stage 2.
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Affiliation(s)
- Jiaping Hu
- Department of Medical Imaging, The Third Affiliated Hospital of Southern Medical University (Academy of Orthopedics· Guangdong Province), Guangzhou, China
| | - Junyi Peng
- School of Biomedical Engineering and Guangdong Provincial Key Laboratory of Medical Image Processing, Southern Medical University, Guangzhou, China
- Guangdong Province Engineering Laboratory for Medical Imaging and Diagnostic Technology, Southern Medical University, Guangzhou, China
| | - Zidong Zhou
- School of Biomedical Engineering and Guangdong Provincial Key Laboratory of Medical Image Processing, Southern Medical University, Guangzhou, China
- Guangdong Province Engineering Laboratory for Medical Imaging and Diagnostic Technology, Southern Medical University, Guangzhou, China
| | - Tianyun Zhao
- Department of Radiology and Imaging Sciences, Emory University, Atlanta, Georgia, USA
- Department of Biomedical Engineering, Stony Brook University, Stony Brook, New York, USA
| | - Lijie Zhong
- Department of Medical Imaging, The Third Affiliated Hospital of Southern Medical University (Academy of Orthopedics· Guangdong Province), Guangzhou, China
| | - Keyan Yu
- Department of Radiology, Peking University Shenzhen Hospital, Shenzhen, Guangdong, China
| | - Kexin Jiang
- Department of Medical Imaging, The Third Affiliated Hospital of Southern Medical University (Academy of Orthopedics· Guangdong Province), Guangzhou, China
| | - Tzak Sing Lau
- Department of Biomedical Engineering, Emory University and Georgia Institute of Technology, Atlanta, Georgia, USA
| | - Chuan Huang
- Department of Radiology and Imaging Sciences, Emory University, Atlanta, Georgia, USA
- Department of Biomedical Engineering, Emory University and Georgia Institute of Technology, Atlanta, Georgia, USA
| | - Lijun Lu
- School of Biomedical Engineering and Guangdong Provincial Key Laboratory of Medical Image Processing, Southern Medical University, Guangzhou, China
- Guangdong Province Engineering Laboratory for Medical Imaging and Diagnostic Technology, Southern Medical University, Guangzhou, China
- Pazhou Lab, Guangzhou, China
| | - Xiaodong Zhang
- Department of Medical Imaging, The Third Affiliated Hospital of Southern Medical University (Academy of Orthopedics· Guangdong Province), Guangzhou, China
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Miraj M. Machine Learning Models for Prediction of Progression of Knee Osteoarthritis: A Comprehensive Analysis. JOURNAL OF PHARMACY AND BIOALLIED SCIENCES 2024; 16:S764-S767. [PMID: 38595580 PMCID: PMC11000962 DOI: 10.4103/jpbs.jpbs_1000_23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2023] [Revised: 10/15/2023] [Accepted: 10/22/2023] [Indexed: 04/11/2024] Open
Abstract
Prediction of the progression of knee osteoarthritis (KOA) is a very challenging task. Early identification of risk factors plays a vital role in diagnosing KOA. Thus, machine learning models are used to predict the progression of KOA. The purpose of the present study is to find out the efficacy of various machine learning models to identify the progression of KOA. A comprehensive literature search was conducted in international databases like Google Scholar, PubMed, Web of Science, and Scopus. Studies published from the year 2010 to May 2023 on the machine learning approach to diagnose KOA were included in the study. A total of 15 studies were selected and analyzed which included machine learning as an approach to diagnose KOA. The present study found that machine learning methods are the best methods to diagnose KOA early. Various methods like deep learning, machine learning, convolutional neural network (CNN), and multi-layer perceptron showed good accuracy in diagnosing its progression. The machine learning approach has attracted significant interest from scientists and researchers and has led to a new automated approach to diagnose KOA, which will help in designing treatment approaches.
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Affiliation(s)
- Mohammad Miraj
- Department of Physical Therapy and Health Rehabilitation, College of Applied Medical Sciences, Majmaah University, AlMajmaah, Saudi Arabia
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Ratna HVK, Jeyaraman M, Jeyaraman N, Nallakumarasamy A, Sharma S, Khanna M, Gupta A. Machine learning and deep neural network-based learning in osteoarthritis knee. World J Methodol 2023; 13:419-425. [PMID: 38229942 PMCID: PMC10789099 DOI: 10.5662/wjm.v13.i5.419] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/16/2023] [Revised: 09/14/2023] [Accepted: 09/28/2023] [Indexed: 12/20/2023] Open
Abstract
Osteoarthritis (OA) of the knee joint is considered the commonest musculoskeletal condition leading to marked disability for patients residing in various regions around the globe. Application of machine learning (ML) in doing research regarding OA has brought about various clinical advances viz, OA being diagnosed at preliminary stages, prediction of chances of development of OA among the population, discovering various phenotypes of OA, calculating the severity in OA structure and also discovering people with slow and fast progression of disease pathology, etc. Various publications are available regarding machine learning methods for the early detection of osteoarthritis. The key features are detected by morphology, molecular architecture, and electrical and mechanical functions. In addition, this particular technique was utilized to assess non-interfering, non-ionizing, and in-vivo techniques using magnetic resonance imaging. ML is being utilized in OA, chiefly with the formulation of large cohorts viz, the OA Initiative, a cohort observational study, the Multi-centre Osteoarthritis Study, an observational, prospective longitudinal study and the Cohort Hip & Cohort Knee, an observational cohort prospective study of both hip and knee OA. Though ML has various contributions and enhancing applications, it remains an imminent field with high potential, also with its limitations. Many more studies are to be carried out to find more about the link between machine learning and knee osteoarthritis, which would help in the improvement of making decisions clinically, and expedite the necessary interventions.
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Affiliation(s)
- Harish V K Ratna
- Department of Orthopaedics, Rathimed Speciality Hospital, Chennai 600040, Tamil Nadu, India
| | - Madhan Jeyaraman
- Department of Orthopaedics, ACS Medical College and Hospital, Dr MGR Educational and Research Institute, Chennai 600077, Tamil Nadu, India
- Department of Orthopaedics, South Texas Orthopaedic Research Institute, Laredo, TX 78045, United States
| | - Naveen Jeyaraman
- Department of Orthopaedics, ACS Medical College and Hospital, Dr MGR Educational and Research Institute, Chennai 600077, Tamil Nadu, India
| | - Arulkumar Nallakumarasamy
- Department of Orthopaedics, ACS Medical College and Hospital, Dr MGR Educational and Research Institute, Chennai 600077, Tamil Nadu, India
| | - Shilpa Sharma
- Department of Paediatric Surgery, All India Institute of Medical Sciences, New Delhi 110029, India
| | - Manish Khanna
- Department of Orthopaedics, Autonomous State Medical College, Ayodhya 224133, Uttar Pradesh, India
| | - Ashim Gupta
- Department of Orthopaedics, South Texas Orthopaedic Research Institute, Laredo, TX 78045, United States
- Department of Regenerative Medicine, Regenerative Orthopaedics, Noida 201301, Uttar Pradesh, India
- Department of Regenerative Medicine, Future Biologics, Lawrenceville, GA 30043, United States
- Department of Regenerative Medicine, BioIntegarte, Lawrenceville, GA 30043, United States
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Su K, Yuan X, Huang Y, Yuan Q, Yang M, Sun J, Li S, Long X, Liu L, Li T, Yuan Z. Improved Prediction of Knee Osteoarthritis by the Machine Learning Model XGBoost. Indian J Orthop 2023; 57:1667-1677. [PMID: 37766962 PMCID: PMC10519887 DOI: 10.1007/s43465-023-00936-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/13/2023] [Accepted: 06/19/2023] [Indexed: 09/29/2023]
Abstract
Objectives The accurate prediction of osteoarthritis (OA) severity in patients can be helpful to make the proper decision of intervention. This study aims to build up a powerful model to assess predictive risk factors and severity of knee osteoarthritis (KOA) in the clinical scenario. Methods A total of 4796 KOA cases and 1205 features were selected by feature selections from the public OA database, Osteoarthritis Initiative (OAI). Six machine learning-based models were constructed and compared for the accuracy of OA prediction. The gradient-boosting decision tree was used to identify important prediction features in the extreme gradient boosting (XGBoost) model. The performance of models was evaluated by F1-score. Results Twenty features were determined as predictors for KOA risk and severity, including the subject characteristics, knee symptoms/risk factors and physical exam. The XGBoost model demonstrated 100% prediction accuracy for 54.7% of examined samples, and the remaining 45.3% of samples showed Kellgren and Lawrence (KL) gradings very close to the actual levels. It showed the highest prediction accuracy with an F1-score of 0.553 among the tested six models. Conclusions We demonstrate that the XGBoost is the best model for the prediction of KOA severity in the six examined models. In addition, 20 risk features were determined as the essential predictors of KOA, including the physical exam, knee symptoms/risk factors and subject characteristics, which may be useful for the identification of high-risk KOA cases and for making appropriate treatment decisions as well.
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Affiliation(s)
- Kui Su
- School of Biomedical and Pharmaceutical Sciences, Guangdong University of Technology, Higher Education Mega Center, 100 Outside Ring West Road, Guangzhou, 510006 People’s Republic of China
| | - Xin Yuan
- School of Biomedical and Pharmaceutical Sciences, Guangdong University of Technology, Higher Education Mega Center, 100 Outside Ring West Road, Guangzhou, 510006 People’s Republic of China
| | - Yukai Huang
- Department of Rheumatology and Immunology, Guangdong Second Provincial General Hospital, Guangzhou, 510317 People’s Republic of China
| | - Qian Yuan
- School of Biomedical and Pharmaceutical Sciences, Guangdong University of Technology, Higher Education Mega Center, 100 Outside Ring West Road, Guangzhou, 510006 People’s Republic of China
| | - Minghui Yang
- School of Biomedical and Pharmaceutical Sciences, Guangdong University of Technology, Higher Education Mega Center, 100 Outside Ring West Road, Guangzhou, 510006 People’s Republic of China
| | - Jianwu Sun
- School of Biomedical and Pharmaceutical Sciences, Guangdong University of Technology, Higher Education Mega Center, 100 Outside Ring West Road, Guangzhou, 510006 People’s Republic of China
| | - Shuyi Li
- School of Biomedical and Pharmaceutical Sciences, Guangdong University of Technology, Higher Education Mega Center, 100 Outside Ring West Road, Guangzhou, 510006 People’s Republic of China
| | - Xinyi Long
- School of Biomedical and Pharmaceutical Sciences, Guangdong University of Technology, Higher Education Mega Center, 100 Outside Ring West Road, Guangzhou, 510006 People’s Republic of China
| | - Lang Liu
- School of Biomedical and Pharmaceutical Sciences, Guangdong University of Technology, Higher Education Mega Center, 100 Outside Ring West Road, Guangzhou, 510006 People’s Republic of China
| | - Tianwang Li
- Department of Rheumatology and Immunology, Guangdong Second Provincial General Hospital, Guangzhou, 510317 People’s Republic of China
| | - Zhengqiang Yuan
- School of Biomedical and Pharmaceutical Sciences, Guangdong University of Technology, Higher Education Mega Center, 100 Outside Ring West Road, Guangzhou, 510006 People’s Republic of China
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Aubonnet R, Ramos J, Recenti M, Jacob D, Ciliberti F, Guerrini L, Gislason MK, Sigurjonsson O, Tsirilaki M, Jónsson H, Gargiulo P. Toward New Assessment of Knee Cartilage Degeneration. Cartilage 2023; 14:351-374. [PMID: 36541701 PMCID: PMC10601563 DOI: 10.1177/19476035221144746] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/21/2022] [Revised: 11/09/2022] [Accepted: 11/25/2022] [Indexed: 12/24/2022] Open
Abstract
OBJECTIVE Assessment of human joint cartilage is a crucial tool to detect and diagnose pathological conditions. This exploratory study developed a workflow for 3D modeling of cartilage and bone based on multimodal imaging. New evaluation metrics were created and, a unique set of data was gathered from healthy controls and patients with clinically evaluated degeneration or trauma. DESIGN We present a novel methodology to evaluate knee bone and cartilage based on features extracted from magnetic resonance imaging (MRI) and computed tomography (CT) data. We developed patient specific 3D models of the tibial, femoral, and patellar bones and cartilages. Forty-seven subjects with a history of degenerative disease, traumatic events, or no symptoms or trauma (control group) were recruited in this study. Ninety-six different measurements were extracted from each knee, 78 2D and 18 3D measurements. We compare the sensitivity of different metrics to classify the cartilage condition and evaluate degeneration. RESULTS Selected features extracted show significant difference between the 3 groups. We created a cumulative index of bone properties that demonstrated the importance of bone condition to assess cartilage quality, obtaining the greatest sensitivity on femur within medial and femoropatellar compartments. We were able to classify degeneration with a maximum recall value of 95.9 where feature importance analysis showed a significant contribution of the 3D parameters. CONCLUSION The present work demonstrates the potential for improving sensitivity in cartilage assessment. Indeed, current trends in cartilage research point toward improving treatments and therefore our contribution is a first step toward sensitive and personalized evaluation of cartilage condition.
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Affiliation(s)
- Romain Aubonnet
- Institute of Biomedical and Neural Engineering, Reykjavik University, Reykjavik, Iceland
| | - Jorgelina Ramos
- Institute of Biomedical and Neural Engineering, Reykjavik University, Reykjavik, Iceland
| | - Marco Recenti
- Institute of Biomedical and Neural Engineering, Reykjavik University, Reykjavik, Iceland
| | - Deborah Jacob
- Institute of Biomedical and Neural Engineering, Reykjavik University, Reykjavik, Iceland
| | - Federica Ciliberti
- Institute of Biomedical and Neural Engineering, Reykjavik University, Reykjavik, Iceland
| | - Lorena Guerrini
- Institute of Biomedical and Neural Engineering, Reykjavik University, Reykjavik, Iceland
| | - Magnus K. Gislason
- Institute of Biomedical and Neural Engineering, Reykjavik University, Reykjavik, Iceland
| | - Olafur Sigurjonsson
- Institute of Biomedical and Neural Engineering, Reykjavik University, Reykjavik, Iceland
| | | | - Halldór Jónsson
- Landspitali, University Hospital of Iceland, Reykjavik, Iceland
- Medical Faculty, University of Iceland, Reykjavik, Iceland
| | - Paolo Gargiulo
- Institute of Biomedical and Neural Engineering, Reykjavik University, Reykjavik, Iceland
- Landspitali, University Hospital of Iceland, Reykjavik, Iceland
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Costello KE, Felson DT, Jafarzadeh SR, Guermazi A, Roemer FW, Segal NA, Lewis CE, Nevitt MC, Lewis CL, Kolachalama VB, Kumar D. Gait, physical activity and tibiofemoral cartilage damage: a longitudinal machine learning analysis in the Multicenter Osteoarthritis Study. Br J Sports Med 2023; 57:1018-1024. [PMID: 36868795 PMCID: PMC10423491 DOI: 10.1136/bjsports-2022-106142] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 02/20/2023] [Indexed: 03/05/2023]
Abstract
OBJECTIVE To (1) develop and evaluate a machine learning model incorporating gait and physical activity to predict medial tibiofemoral cartilage worsening over 2 years in individuals without advanced knee osteoarthritis and (2) identify influential predictors in the model and quantify their effect on cartilage worsening. DESIGN An ensemble machine learning model was developed to predict worsened cartilage MRI Osteoarthritis Knee Score at follow-up from gait, physical activity, clinical and demographic data from the Multicenter Osteoarthritis Study. Model performance was evaluated in repeated cross-validations. The top 10 predictors of the outcome across 100 held-out test sets were identified by a variable importance measure. Their effect on the outcome was quantified by g-computation. RESULTS Of 947 legs in the analysis, 14% experienced medial cartilage worsening at follow-up. The median (2.5-97.5th percentile) area under the receiver operating characteristic curve across the 100 held-out test sets was 0.73 (0.65-0.79). Baseline cartilage damage, higher Kellgren-Lawrence grade, greater pain during walking, higher lateral ground reaction force impulse, greater time spent lying and lower vertical ground reaction force unloading rate were associated with greater risk of cartilage worsening. Similar results were found for the subset of knees with baseline cartilage damage. CONCLUSIONS A machine learning approach incorporating gait, physical activity and clinical/demographic features showed good performance for predicting cartilage worsening over 2 years. While identifying potential intervention targets from the model is challenging, lateral ground reaction force impulse, time spent lying and vertical ground reaction force unloading rate should be investigated further as potential early intervention targets to reduce medial tibiofemoral cartilage worsening.
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Affiliation(s)
- Kerry E Costello
- Mechanical and Aerospace Engineering, University of Florida, Gainesville, Florida, USA
- Physical Therapy, Boston University, Boston, Massachusetts, USA
- Rheumatology, Boston University School of Medicine, Boston, Massachusetts, USA
| | - David T Felson
- Rheumatology, Boston University School of Medicine, Boston, Massachusetts, USA
| | - S Reza Jafarzadeh
- Rheumatology, Boston University School of Medicine, Boston, Massachusetts, USA
| | - Ali Guermazi
- Radiology, VA Boston Healthcare System, West Roxbury, Massachusetts, USA
| | - Frank W Roemer
- Radiology, Universitatsklinikum Erlangen, Erlangen, Germany
- Radiology, Boston University School of Medicine, Boston, Massachusetts, USA
| | - Neil A Segal
- Rehabilitation Medicine, The University of Kansas Medical Center, Kansas City, Kansas, USA
- Epidemiology, The University of Iowa, Iowa City, Iowa, USA
| | - Cora E Lewis
- Epidemiology, The University of Alabama, Birmingham, Alabama, USA
| | - Michael C Nevitt
- Epidemiology & Biostatistics, University of California, San Francisco, California, USA
| | - Cara L Lewis
- Physical Therapy, Boston University, Boston, Massachusetts, USA
- Rheumatology, Boston University School of Medicine, Boston, Massachusetts, USA
| | - Vijaya B Kolachalama
- Computational Biomedicine, Boston University School of Medicine, Boston, Massachusetts, USA
- Computer Science, Boston University, Boston, Massachusetts, USA
| | - Deepak Kumar
- Physical Therapy, Boston University, Boston, Massachusetts, USA
- Rheumatology, Boston University School of Medicine, Boston, Massachusetts, USA
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9
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Bonecka J, Skibniewski M, Zep P, Domino M. Knee Joint Osteoarthritis in Overweight Cats: The Clinical and Radiographic Findings. Animals (Basel) 2023; 13:2427. [PMID: 37570234 PMCID: PMC10417339 DOI: 10.3390/ani13152427] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2023] [Revised: 07/21/2023] [Accepted: 07/25/2023] [Indexed: 08/13/2023] Open
Abstract
Despite a high prevalence of osteoarthritis (OA) reported in the domesticated cat population, studies on feline knee joint OA are scarcer. Knee joint OA is a painful, age-related, chronic degenerative joint disease that significantly affects cats' activity and quality of life. In dogs and humans, one may consider overweight as a risk factor for the development and progression of knee joint OA; therefore, this study aims to assess the severity of knee joint OA in the body-weight-related groups of cats concerning clinical symptoms and radiographic signs. The study was conducted on sixty-four (n = 64) cats with confirmed OA. The demographic data on sex, neutering, age, and breed were collected. Then, the body condition score (BCS) was assessed, and each cat was allocated to the underweight, normal-weight, or overweight group. Within clinical symptoms, joint pain, joint swelling, joint deformities, lameness, reluctance to move, and apathy were graded. Based on the radiographic signs, minor OA, mild OA, moderate OA, and severe OA were scored. Prevalence and co-occurrence of the studied variables were then assessed. Joint pain was elicited in 20-31% of the OA-affected joints, joint deformities in 21-30%, and lameness in 20-54%, with no differences between weight-related groups. Severe OA was detected in 10-16% of the OA-affected joints, with no differences between weight-related groups. Severe OA in feline knee joints appears with similar frequency in overweight, underweight, and normal-weight cats. However, the general prevalence of clinical symptoms and radiographic signs is different in overweight cats.
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Affiliation(s)
- Joanna Bonecka
- Department of Small Animal Diseases and Clinic, Institute of Veterinary Medicine, Warsaw University of Life Sciences (WULS-SGGW), 02-787 Warsaw, Poland
| | - Michał Skibniewski
- Department of Morphological Sciences, Institute of Veterinary Medicine, Warsaw University of Life Sciences (WULS-SGGW), 02-787 Warsaw, Poland
| | - Paweł Zep
- OchWET Veterinary Clinic, 02-119 Warszawa, Poland
| | - Małgorzata Domino
- Department of Large Animal Diseases and Clinic, Institute of Veterinary Medicine, Warsaw University of Life Sciences (WULS-SGGW), 02-787 Warsaw, Poland
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10
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Khader A, Alquran H. Automated Prediction of Osteoarthritis Level in Human Osteochondral Tissue Using Histopathological Images. Bioengineering (Basel) 2023; 10:764. [PMID: 37508791 PMCID: PMC10376879 DOI: 10.3390/bioengineering10070764] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2023] [Revised: 06/21/2023] [Accepted: 06/23/2023] [Indexed: 07/30/2023] Open
Abstract
Osteoarthritis (OA) is the most common arthritis and the leading cause of lower extremity disability in older adults. Understanding OA progression is important in the development of patient-specific therapeutic techniques at the early stage of OA rather than at the end stage. Histopathology scoring systems are usually used to evaluate OA progress and the mechanisms involved in the development of OA. This study aims to classify the histopathological images of cartilage specimens automatically, using artificial intelligence algorithms. Hematoxylin and eosin (HE)- and safranin O and fast green (SafO)-stained images of human cartilage specimens were divided into early, mild, moderate, and severe OA. Five pre-trained convolutional networks (DarkNet-19, MobileNet, ResNet-101, NasNet) were utilized to extract the twenty features from the last fully connected layers for both scenarios of SafO and HE. Principal component analysis (PCA) and ant lion optimization (ALO) were utilized to obtain the best-weighted features. The support vector machine classifier was trained and tested based on the selected descriptors to achieve the highest accuracies of 98.04% and 97.03% in HE and SafO, respectively. Using the ALO algorithm, the F1 scores were 0.97, 0.991, 1, and 1 for the HE images and 1, 0.991, 0.97, and 1 for the SafO images for the early, mild, moderate, and severe classes, respectively. This algorithm may be a useful tool for researchers to evaluate the histopathological images of OA without the need for experts in histopathology scoring systems or the need to train new experts. Incorporating automated deep features could help to improve the characterization and understanding of OA progression and development.
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Affiliation(s)
- Ateka Khader
- Department of Biomedical Systems and Informatics Engineering, Hijjawi Faculty for Engineering Technology, Yarmouk University, Irbid 21163, Jordan
| | - Hiam Alquran
- Department of Biomedical Systems and Informatics Engineering, Hijjawi Faculty for Engineering Technology, Yarmouk University, Irbid 21163, Jordan
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11
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Martel-Pelletier J, Paiement P, Pelletier JP. Magnetic resonance imaging assessments for knee segmentation and their use in combination with machine/deep learning as predictors of early osteoarthritis diagnosis and prognosis. Ther Adv Musculoskelet Dis 2023; 15:1759720X231165560. [PMID: 37151912 PMCID: PMC10155034 DOI: 10.1177/1759720x231165560] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2022] [Accepted: 03/23/2023] [Indexed: 05/09/2023] Open
Abstract
Knee osteoarthritis (OA) is a prevalent and disabling disease that can develop over decades. This disease is heterogeneous and involves structural changes in the whole joint, encompassing multiple tissue types. Detecting OA before the onset of irreversible changes is crucial for early management, and this could be achieved by allowing knee tissue visualization and quantifying their changes over time. Although some imaging modalities are available for knee structure assessment, magnetic resonance imaging (MRI) is preferred. This narrative review looks at existing literature, first on MRI-developed approaches for evaluating knee articular tissues, and second on prediction using machine/deep-learning-based methodologies and MRI as input or outcome for early OA diagnosis and prognosis. A substantial number of MRI methodologies have been developed to assess several knee tissues in a semi-quantitative and quantitative fashion using manual, semi-automated and fully automated systems. This dynamic field has grown substantially since the advent of machine/deep learning. Another active area is predictive modelling using machine/deep-learning methodologies enabling robust early OA diagnosis/prognosis. Moreover, incorporating MRI markers as input/outcome in such predictive models is important for a more accurate OA structural diagnosis/prognosis. The main limitation of their usage is the ability to move them in rheumatology practice. In conclusion, MRI knee tissue determination and quantification provide early indicators for individuals at high risk of developing this disease or for patient prognosis. Such assessment of knee tissues, combined with the development of models/tools from machine/deep learning using, in addition to other parameters, MRI markers for early diagnosis/prognosis, will maximize opportunities for individualized risk assessment for use in clinical practice permitting precision medicine. Future efforts should be made to integrate such prediction models into open access, allowing early disease management to prevent or delay the OA outcome.
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Affiliation(s)
- Johanne Martel-Pelletier
- Osteoarthritis Research Unit, University of
Montreal Hospital Research Centre (CRCHUM), 900 Saint-Denis, R11.412B,
Montreal, QC H2X 0A9, Canada
| | - Patrice Paiement
- Osteoarthritis Research Unit, University of
Montreal Hospital Research Centre (CRCHUM), Montreal, QC, Canada
| | - Jean-Pierre Pelletier
- Osteoarthritis Research Unit, University of
Montreal Hospital Research Centre (CRCHUM), Montreal, QC, Canada
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12
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Yoo HJ, Jeong HW, Kim SW, Kim M, Lee JI, Lee YS. Prediction of progression rate and fate of osteoarthritis: Comparison of machine learning algorithms. J Orthop Res 2023; 41:583-590. [PMID: 35716159 DOI: 10.1002/jor.25398] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/18/2021] [Revised: 05/15/2022] [Accepted: 06/15/2022] [Indexed: 02/04/2023]
Abstract
Appropriate prediction models can assist healthcare systems in delaying or reversing osteoarthritis (OA) progression. We aimed to identify a reliable algorithm for predicting the progression rate and fate of OA based on patient-specific information. From May 2003 to 2019, 83,280 knees were collected. Age, sex, body mass index, bone mineral density, physical demands for occupation, comorbidities, and initial Kellgren-Lawrence (K-L) grade were used as variables for the prediction models. The prediction targets were divided into dichotomous groups for even distribution. We compared the performances of logistic regression (LR), random forest (RF), and extreme gradient boost (XGB) algorithms. Each algorithm had the best precision when the model used all variables. XGB showed the best results in accuracy, recall, F1 score, specificity, and error rates (progression rate/fate of OA: 0.710/0.877, 0.542/0.637, 0.637/0.758, 0.859/0.981, and 0.290/0.123, respectively). The feature importance of RF and XGB had the same order up to the top six for each prediction target. Age and initial K-L grade had the highest feature importance in RF and XGB for the progression rate and fate of OA, respectively. The XGB and RF machine learning algorithms showed better performance than conventional LR in predicting the progression rate and fate of OA. The best performance was obtained when all variables were combined using the XGB algorithm. For each algorithm, the initial K-L grade and physical demand for occupation were the greatest contributors with superior feature importance compared with the others.
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Affiliation(s)
- Hyun Jin Yoo
- Department of Orthopaedic Surgery, Seoul National University College of Medicine, Seoul National University Bundang Hospital, Seoul, South Korea.,Department of Orthopedic Surgery, Konyang University College of Medicine, Daejeon, South Korea
| | - Ho Won Jeong
- Department of Orthopaedic Surgery, Seoul National University College of Medicine, Seoul National University Bundang Hospital, Seoul, South Korea
| | - Sung Woon Kim
- Department of Mathematics, Sungkyunkwan University College of Natural Sciences, Suwon, South Korea
| | - Myeongju Kim
- Center for Artificial Intelligence in Healthcare, Seoul National University Bundang Hospital, Seoul, South Korea
| | - Jae Ik Lee
- Department of Orthopaedic Surgery, Seoul National University College of Medicine, Seoul National University Bundang Hospital, Seoul, South Korea
| | - Yong Seuk Lee
- Department of Orthopaedic Surgery, Seoul National University College of Medicine, Seoul National University Bundang Hospital, Seoul, South Korea
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13
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Demanse D, Saxer F, Lustenberger P, Tankó LB, Nikolaus P, Rasin I, Brennan DF, Roubenoff R, Premji S, Conaghan PG, Schieker M. Unsupervised machine-learning algorithms for the identification of clinical phenotypes in the osteoarthritis initiative database. Semin Arthritis Rheum 2023; 58:152140. [PMID: 36446256 DOI: 10.1016/j.semarthrit.2022.152140] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2022] [Revised: 11/03/2022] [Accepted: 11/16/2022] [Indexed: 11/20/2022]
Abstract
OBJECTIVES Osteoarthritis (OA) is a complex disease comprising diverse underlying patho-mechanisms. To enable the development of effective therapies, segmentation of the heterogenous patient population is critical. This study aimed at identifying such patient clusters using two different machine learning algorithms. METHODS Using the progression and incident cohorts of the Osteoarthritis Initiative (OAI) dataset, deep embedded clustering (DEC) and multiple factor analysis with clustering (MFAC) approaches, including 157 input-variables at baseline, were employed to differentiate specific patient profiles. RESULTS DEC resulted in 5 and MFAC in 3 distinct patient phenotypes. Both identified a "comorbid" cluster with higher body mass index (BMI), relevant burden of comorbidity and low levels of physical activity. Both methods also identified a younger and physically more active cluster and an elderly cluster with functional limitations, but low disease impact. The additional two clusters identified with DEC were subgroups of the young/physically active and the elderly/physically inactive clusters. Overall pain trajectories over 9 years were stable, only the numeric rating scale (NRS) for pain showed distinct increase, while physical activity decreased in all clusters. Clusters showed different (though non-significant) trajectories of joint space changes over the follow-up period of 8 years. CONCLUSION Two different clustering approaches yielded similar patient allocations primarily separating complex "comorbid" patients from healthier subjects, the latter divided in young/physically active vs elderly/physically inactive subjects. The observed association to clinical (pain/physical activity) and structural progression could be helpful for early trial design as strategy to enrich for patients who may specifically benefit from disease-modifying treatments.
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Affiliation(s)
| | - Franziska Saxer
- Novartis Institutes for Biomedical Research, Novartis Campus, 4002, Basel, Switzerland; Medical Faculty, University of Basel, 4002, Basel, Switzerland.
| | | | | | - Philipp Nikolaus
- IBM Switzerland AG, Vulkanstrasse 106, 8048, Zürich, Switzerland
| | - Ilja Rasin
- IBM Switzerland AG, Vulkanstrasse 106, 8048, Zürich, Switzerland.
| | - Damian F Brennan
- IBM Switzerland AG, Vulkanstrasse 106, 8048, Zürich, Switzerland
| | - Ronenn Roubenoff
- Novartis Institutes for Biomedical Research, Novartis Campus, 4002, Basel, Switzerland.
| | - Sumehra Premji
- Novartis Pharma AG, 4002, Basel, Switzerland; IBM Switzerland AG, Vulkanstrasse 106, 8048, Zürich, Switzerland.
| | - Philip G Conaghan
- Leeds Institute of Rheumatic & Musculoskeletal Medicine, University of Leeds and NIHR Leeds Biomedical Research Centre, UK.
| | - Matthias Schieker
- Novartis Institutes for Biomedical Research, Novartis Campus, 4002, Basel, Switzerland.
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14
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Ahmed SM, Mstafa RJ. Identifying Severity Grading of Knee Osteoarthritis from X-ray Images Using an Efficient Mixture of Deep Learning and Machine Learning Models. Diagnostics (Basel) 2022; 12:diagnostics12122939. [PMID: 36552945 PMCID: PMC9777157 DOI: 10.3390/diagnostics12122939] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2022] [Revised: 11/17/2022] [Accepted: 11/22/2022] [Indexed: 11/26/2022] Open
Abstract
Recently, many diseases have negatively impacted people's lifestyles. Among these, knee osteoarthritis (OA) has been regarded as the primary cause of activity restriction and impairment, particularly in older people. Therefore, quick, accurate, and low-cost computer-based tools for the early prediction of knee OA patients are urgently needed. In this paper, as part of addressing this issue, we developed a new method to efficiently diagnose and classify knee osteoarthritis severity based on the X-ray images to classify knee OA in (i.e., binary and multiclass) in order to study the impact of different class-based, which has not yet been addressed in previous studies. This will provide physicians with a variety of deployment options in the future. Our proposed models are basically divided into two frameworks based on applying pre-trained convolutional neural networks (CNN) for feature extraction as well as fine-tuning the pre-trained CNN using the transfer learning (TL) method. In addition, a traditional machine learning (ML) classifier is used to exploit the enriched feature space to achieve better knee OA classification performance. In the first one, we developed five classes-based models using a proposed pre-trained CNN for feature extraction, principal component analysis (PCA) for dimensionality reduction, and support vector machine (SVM) for classification. While in the second framework, a few changes were made to the steps in the first framework, the concept of TL was used to fine-tune the proposed pre-trained CNN from the first framework to fit the two classes, three classes, and four classes-based models. The proposed models are evaluated on X-ray data, and their performance is compared with the existing state-of-the-art models. It is observed through conducted experimental analysis to demonstrate the efficacy of the proposed approach in improving the classification accuracy in both multiclass and binary class-based in the OA case study. Nonetheless, the empirical results revealed that the fewer multiclass labels used, the better performance achieved, with the binary class labels outperforming all, which reached a 90.8% accuracy rate. Furthermore, the proposed models demonstrated their contribution to early classification in the first stage of the disease to help reduce its progression and improve people's quality of life.
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Affiliation(s)
- Sozan Mohammed Ahmed
- Department of Computer Science, Faculty of Science, University of Zakho, Duhok 42002, Iraq
| | - Ramadhan J. Mstafa
- Department of Computer Science, Faculty of Science, University of Zakho, Duhok 42002, Iraq
- Department of Computer Science, College of Science, Nawroz University, Duhok 42001, Iraq
- Correspondence:
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15
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Klontzas ME, Karantanas AH. Research in Musculoskeletal Radiology: Setting Goals and Strategic Directions. Semin Musculoskelet Radiol 2022; 26:354-358. [PMID: 35654100 DOI: 10.1055/s-0042-1748319] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
The future of musculoskeletal (MSK) radiology is being built on research developments in the field. Over the past decade, MSK imaging research has been dominated by advancements in molecular imaging biomarkers, artificial intelligence, radiomics, and novel high-resolution equipment. Adequate preparation of trainees and specialists will ensure that current and future leaders will be prepared to embrace and critically appraise technological developments, will be up to date on clinical developments, such as the use of artificial tissues, will define research directions, and will actively participate and lead multidisciplinary research. This review presents an overview of the current MSK research landscape and proposes tangible future goals and strategic directions that will fortify the future of MSK radiology.
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Affiliation(s)
- Michail E Klontzas
- Department of Medical Imaging, University Hospital of Heraklion, Crete, Greece.,Advanced Hybrid Imaging Systems, Institute of Computer Science, Foundation for Research and Technology (FORTH), Heraklion, Crete, Greece.,Department of Radiology, School of Medicine, University of Crete, Heraklion, Greece
| | - Apostolos H Karantanas
- Department of Medical Imaging, University Hospital of Heraklion, Crete, Greece.,Advanced Hybrid Imaging Systems, Institute of Computer Science, Foundation for Research and Technology (FORTH), Heraklion, Crete, Greece.,Department of Radiology, School of Medicine, University of Crete, Heraklion, Greece
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16
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17
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Awan MJ, Mohd Rahim MS, Salim N, Rehman A, Nobanee H. Machine Learning-Based Performance Comparison to Diagnose Anterior Cruciate Ligament Tears. JOURNAL OF HEALTHCARE ENGINEERING 2022; 2022:2550120. [PMID: 35444781 PMCID: PMC9015864 DOI: 10.1155/2022/2550120] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/16/2021] [Revised: 01/02/2022] [Accepted: 03/21/2022] [Indexed: 12/14/2022]
Abstract
In recent times, knee joint pains have become severe enough to make daily tasks difficult. Knee osteoarthritis is a type of arthritis and a leading cause of disability worldwide. The middle of the knee contains a vital portion, the anterior cruciate ligament (ACL). It is necessary to diagnose the ACL ruptured tears early to avoid surgery. The study aimed to perform a comparative analysis of machine learning models to identify the condition of three ACL tears. In contrast to previous studies, this study also considers imbalanced data distributions as machine learning techniques struggle to deal with this problem. The paper applied and analyzed four machine learning classification models, namely, random forest (RF), categorical boosting (Cat Boost), light gradient boosting machines (LGBM), and highly randomized classifier (ETC) on the balanced, structured dataset of ACL. After oversampling a hyperparameter adjustment, the above four models have achieved an average accuracy of 95.72%, 94.98%, 94.98%, and 98.26%. There are 2070 observations and eight features in the collection of three diagnosis ACL classes after oversampling. The area under curve value was approximately 0.998, respectively. Experiments were performed using twelve machine learning algorithms with imbalanced and balanced datasets. However, the accuracy of the imbalanced dataset has remained under 76% for all twelve models. After oversampling, the proposed model may contribute to the investigation of ACL tears on magnetic resonance imaging and other knee ligaments efficiently and automatically without involving radiologists.
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Affiliation(s)
- Mazhar Javed Awan
- School of Computing, Faculty of Engineering, Universiti Teknologi Malaysia (UTM), Johor 81310, Malaysia
- Department of Software Engineering, University of Management and Technology, Lahore 54770, Pakistan
| | - Mohd Shafry Mohd Rahim
- School of Computing, Faculty of Engineering, Universiti Teknologi Malaysia (UTM), Johor 81310, Malaysia
| | - Naomie Salim
- School of Computing, Faculty of Engineering, Universiti Teknologi Malaysia (UTM), Johor 81310, Malaysia
| | - Amjad Rehman
- Artificial Intelligence and Data Analytics Laboratory, College of Computer and Information Sciences (CCIS), Prince Sultan University, Riyadh 11586, Saudi Arabia
| | - Haitham Nobanee
- College of Business, Abu Dhabi University, P.O. Box 59911, Abu Dhabi, UAE
- Oxford Centre for Islamic Studies, University of Oxford, Oxford OX1 2J, UK
- School of Histories Languages and Cultures, The University of Liverpool, Liverpool L69 3BX, UK
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18
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Yue Y, Gao Q, Zhao M, Li D, Tian H. Prediction of Knee Prosthesis Using Patient Gender and BMI With Non-marked X-Ray by Deep Learning. Front Surg 2022; 9:798761. [PMID: 35360429 PMCID: PMC8963922 DOI: 10.3389/fsurg.2022.798761] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2021] [Accepted: 02/11/2022] [Indexed: 11/13/2022] Open
Abstract
BackgroundTotal knee arthroplasty (TKA) is effective for severe osteoarthritis and other related diseases. Accurate prosthesis prediction is a crucial factor for improving clinical outcomes and patient satisfaction after TKA. Current studies mainly focus on conventional manual template measurements, which are inconvenient and inefficient.MethodsIn this article, we utilize convolutional neural networks to analyze a multimodal patient data and design a system that helps doctors choose prostheses for TKA. To alleviate the problems of insufficient data and uneven distribution of labels, research on model structure, loss function and transfer learning is carried out. Algorithm optimization based on error correct output coding (ECOC) is implemented to further boost the performance.ResultsThe experimental results show the ECOC-based model reaches prediction accuracies of 88.23% and 86.27% for femoral components and tibial components, respectively.ConclusionsThe results verify that the ECOC-based model for prosthesis prediction in TKA is feasible and outperforms existing methods, which is of great significance for templating.
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Affiliation(s)
- Yu Yue
- Department of Electronics, Peking University, Beijing, China
| | - Qiaochu Gao
- Department of Electronics, Peking University, Beijing, China
| | - Minwei Zhao
- Department of Orthopedics, Peking University Third Hospital, and Engineering Research Center of Bone and Joint Precision Medicine, Ministry of Education, Beijing, China
- *Correspondence: Minwei Zhao
| | - Dou Li
- Department of Electronics, Peking University, Beijing, China
- Dou Li
| | - Hua Tian
- Department of Orthopedics, Peking University Third Hospital, and Engineering Research Center of Bone and Joint Precision Medicine, Ministry of Education, Beijing, China
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19
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Binvignat M, Pedoia V, Butte AJ, Louati K, Klatzmann D, Berenbaum F, Mariotti-Ferrandiz E, Sellam J. Use of machine learning in osteoarthritis research: a systematic literature review. RMD Open 2022; 8:e001998. [PMID: 35296530 PMCID: PMC8928401 DOI: 10.1136/rmdopen-2021-001998] [Citation(s) in RCA: 23] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2021] [Accepted: 02/16/2022] [Indexed: 11/21/2022] Open
Abstract
OBJECTIVE The aim of this systematic literature review was to provide a comprehensive and exhaustive overview of the use of machine learning (ML) in the clinical care of osteoarthritis (OA). METHODS A systematic literature review was performed in July 2021 using MEDLINE PubMed with key words and MeSH terms. For each selected article, the number of patients, ML algorithms used, type of data analysed, validation methods and data availability were collected. RESULTS From 1148 screened articles, 46 were selected and analysed; most were published after 2017. Twelve articles were related to diagnosis, 7 to prediction, 4 to phenotyping, 12 to severity and 11 to progression. The number of patients included ranged from 18 to 5749. Overall, 35% of the articles described the use of deep learning And 74% imaging analyses. A total of 85% of the articles involved knee OA and 15% hip OA. No study investigated hand OA. Most of the studies involved the same cohort, with data from the OA initiative described in 46% of the articles and the MOST and Cohort Hip and Cohort Knee cohorts in 11% and 7%. Data and source codes were described as publicly available respectively in 54% and 22% of the articles. External validation was provided in only 7% of the articles. CONCLUSION This review proposes an up-to-date overview of ML approaches used in clinical OA research and will help to enhance its application in this field.
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Affiliation(s)
- Marie Binvignat
- Department of Rheumatology, Hôpital Saint-Antoine, Assistance Publique - Hôpitaux de Paris (AP-HP), Centre de Recherche Saint-Antoine, Inserm UMRS_938, Assistance Publique - Hôpitaux de Paris (AP-HP), Sorbonne Universite, Paris, France
- Bakar Computational Health Science Institute, University of California, San Francisco, California, USA
- Immunology Immunopathology Immunotherapy UMRS_959, Sorbonne Universite, Paris, France
| | - Valentina Pedoia
- Center for Intelligent Imaging (CI2), Department of Radiology and Biomedical Imaging, University of California, San Francisco, California, USA
| | - Atul J Butte
- Bakar Computational Health Science Institute, University of California, San Francisco, California, USA
| | - Karine Louati
- Department of Rheumatology, Hôpital Saint-Antoine, Assistance Publique - Hôpitaux de Paris (AP-HP), Centre de Recherche Saint-Antoine, Inserm UMRS_938, Assistance Publique - Hôpitaux de Paris (AP-HP), Sorbonne Universite, Paris, France
| | - David Klatzmann
- Immunology Immunopathology Immunotherapy UMRS_959, Sorbonne Universite, Paris, France
- Biotherapy (CIC-BTi) and Inflammation Immunopathology-Biotherapy Department (i2B), Hôpital Pitié-Salpêtrière, AP-HP, Paris, France
| | - Francis Berenbaum
- Department of Rheumatology, Hôpital Saint-Antoine, Assistance Publique - Hôpitaux de Paris (AP-HP), Centre de Recherche Saint-Antoine, Inserm UMRS_938, Assistance Publique - Hôpitaux de Paris (AP-HP), Sorbonne Universite, Paris, France
| | | | - Jérémie Sellam
- Department of Rheumatology, Hôpital Saint-Antoine, Assistance Publique - Hôpitaux de Paris (AP-HP), Centre de Recherche Saint-Antoine, Inserm UMRS_938, Assistance Publique - Hôpitaux de Paris (AP-HP), Sorbonne Universite, Paris, France
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20
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A Comprehensive Survey on Bone Segmentation Techniques in Knee Osteoarthritis Research: From Conventional Methods to Deep Learning. Diagnostics (Basel) 2022; 12:diagnostics12030611. [PMID: 35328164 PMCID: PMC8946914 DOI: 10.3390/diagnostics12030611] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2022] [Revised: 02/08/2022] [Accepted: 02/23/2022] [Indexed: 11/17/2022] Open
Abstract
Knee osteoarthritis (KOA) is a degenerative joint disease, which significantly affects middle-aged and elderly people. The majority of KOA is primarily based on hyaline cartilage change, according to medical images. However, technical bottlenecks such as noise, artifacts, and modality pose enormous challenges for an objective and efficient early diagnosis. Therefore, the correct prediction of arthritis is an essential step for effective diagnosis and the prevention of acute arthritis, where early diagnosis and treatment can assist to reduce the progression of KOA. However, predicting the development of KOA is a difficult and urgent problem that, if addressed, could accelerate the development of disease-modifying drugs, in turn helping to avoid millions of total joint replacement procedures each year. In knee joint research and clinical practice there are segmentation approaches that play a significant role in KOA diagnosis and categorization. In this paper, we seek to give an in-depth understanding of a wide range of the most recent methodologies for knee articular bone segmentation; segmentation methods allow the estimation of articular cartilage loss rate, which is utilized in clinical practice for assessing the disease progression and morphological change, ranging from traditional techniques to deep learning (DL)-based techniques. Moreover, the purpose of this work is to give researchers a general review of the currently available methodologies in the area. Therefore, it will help researchers who want to conduct research in the field of KOA, as well as highlight deficiencies and potential considerations in application in clinical practice. Finally, we highlight the diagnostic value of deep learning for future computer-aided diagnostic applications to complete this review.
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21
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Joseph GB, McCulloch CE, Sohn JH, Pedoia V, Majumdar S, Link TM. AI MSK clinical applications: cartilage and osteoarthritis. Skeletal Radiol 2022; 51:331-343. [PMID: 34735607 DOI: 10.1007/s00256-021-03909-2] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/14/2021] [Revised: 09/08/2021] [Accepted: 09/12/2021] [Indexed: 02/02/2023]
Abstract
The advancements of artificial intelligence (AI) for osteoarthritis (OA) applications have been rapid in recent years, particularly innovations of deep learning for image classification, lesion detection, cartilage segmentation, and prediction modeling of future knee OA development. This review article focuses on AI applications in OA research, first describing machine learning (ML) techniques and workflow, followed by how these algorithms are used for OA classification tasks through imaging and non-imaging-based ML models. Deep learning applications for OA research, including analysis of both radiographs for automatic detection of OA severity, and MR images for detection of cartilage/meniscus lesions and cartilage segmentation for automatic T2 quantification will be described. In addition, information on ML models that identify individuals at high risk of OA development will be provided. The future vision of machine learning applications in imaging of OA and cartilage hinges on implementation of AI for optimizing imaging protocols, quantitative assessment of cartilage, and automated analysis of disease burden yielding a faster and more efficient workflow for a radiologist with a higher level of reproducibility and precision. It may also provide risk assessment tools for individual patients, which is an integral part of precision medicine.
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Affiliation(s)
- Gabby B Joseph
- Department of Radiology and Biomedical Imaging, University of California, 185 Berry St, Suite 350, San Francisco, CA, 94158, USA.
| | - Charles E McCulloch
- Department of Epidemiology and Biostatistics, University of California, San Francisco, CA, USA
| | - Jae Ho Sohn
- Department of Radiology and Biomedical Imaging, University of California, 185 Berry St, Suite 350, San Francisco, CA, 94158, USA
| | - Valentina Pedoia
- Department of Radiology and Biomedical Imaging, University of California, 185 Berry St, Suite 350, San Francisco, CA, 94158, USA
| | - Sharmila Majumdar
- Department of Radiology and Biomedical Imaging, University of California, 185 Berry St, Suite 350, San Francisco, CA, 94158, USA
| | - Thomas M Link
- Department of Radiology and Biomedical Imaging, University of California, 185 Berry St, Suite 350, San Francisco, CA, 94158, USA
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22
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Ciliberti FK, Guerrini L, Gunnarsson AE, Recenti M, Jacob D, Cangiano V, Tesfahunegn YA, Islind AS, Tortorella F, Tsirilaki M, Jónsson H, Gargiulo P, Aubonnet R. CT- and MRI-Based 3D Reconstruction of Knee Joint to Assess Cartilage and Bone. Diagnostics (Basel) 2022; 12:279. [PMID: 35204370 PMCID: PMC8870751 DOI: 10.3390/diagnostics12020279] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2021] [Revised: 01/10/2022] [Accepted: 01/20/2022] [Indexed: 02/01/2023] Open
Abstract
For the observation of human joint cartilage, X-ray, computed tomography (CT) or magnetic resonance imaging (MRI) are the main diagnostic tools to evaluate pathologies or traumas. The current work introduces a set of novel measurements and 3D features based on MRI and CT data of the knee joint, used to reconstruct bone and cartilages and to assess cartilage condition from a new perspective. Forty-seven subjects presenting a degenerative disease, a traumatic injury or no symptoms or trauma were recruited in this study and scanned using CT and MRI. Using medical imaging software, the bone and cartilage of the knee joint were segmented and 3D reconstructed. Several features such as cartilage density, volume and surface were extracted. Moreover, an investigation was carried out on the distribution of cartilage thickness and curvature analysis to identify new markers of cartilage condition. All the extracted features were used with advanced statistics tools and machine learning to test the ability of our model to predict cartilage conditions. This work is a first step towards the development of a new gold standard of cartilage assessment based on 3D measurements.
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Affiliation(s)
- Federica Kiyomi Ciliberti
- Institute of Biomedical and Neural Engineering, Reykjavik University, 101 Reykjavik, Iceland; (F.K.C.); (L.G.); (A.E.G.); (M.R.); (D.J.); (V.C.); (R.A.)
- Department of Electrical, Information Engineering and Applied Mathematics, University of Salerno, 84084 Salerno, Italy;
| | - Lorena Guerrini
- Institute of Biomedical and Neural Engineering, Reykjavik University, 101 Reykjavik, Iceland; (F.K.C.); (L.G.); (A.E.G.); (M.R.); (D.J.); (V.C.); (R.A.)
- Laboratory of Cellular and Molecular Engineering “Silvio Cavalcanti”, Department of Electrical, Electronic and Information Engineering “Guglielmo Marconi” (DEI), University of Bologna, 47521 Cesena, Italy
| | - Arnar Evgeni Gunnarsson
- Institute of Biomedical and Neural Engineering, Reykjavik University, 101 Reykjavik, Iceland; (F.K.C.); (L.G.); (A.E.G.); (M.R.); (D.J.); (V.C.); (R.A.)
| | - Marco Recenti
- Institute of Biomedical and Neural Engineering, Reykjavik University, 101 Reykjavik, Iceland; (F.K.C.); (L.G.); (A.E.G.); (M.R.); (D.J.); (V.C.); (R.A.)
| | - Deborah Jacob
- Institute of Biomedical and Neural Engineering, Reykjavik University, 101 Reykjavik, Iceland; (F.K.C.); (L.G.); (A.E.G.); (M.R.); (D.J.); (V.C.); (R.A.)
| | - Vincenzo Cangiano
- Institute of Biomedical and Neural Engineering, Reykjavik University, 101 Reykjavik, Iceland; (F.K.C.); (L.G.); (A.E.G.); (M.R.); (D.J.); (V.C.); (R.A.)
| | | | | | - Francesco Tortorella
- Department of Electrical, Information Engineering and Applied Mathematics, University of Salerno, 84084 Salerno, Italy;
| | - Mariella Tsirilaki
- Department of Radiology, Landspitali, University Hospital of Iceland, 101 Reykjavik, Iceland;
| | - Halldór Jónsson
- Department of Orthopaedics, Landspitali, University Hospital of Iceland, 101 Reykjavik, Iceland;
- Medical Faculty, University of Iceland, 101 Reykjavik, Iceland
| | - Paolo Gargiulo
- Institute of Biomedical and Neural Engineering, Reykjavik University, 101 Reykjavik, Iceland; (F.K.C.); (L.G.); (A.E.G.); (M.R.); (D.J.); (V.C.); (R.A.)
- Department of Science, Landspitali, University Hospital of Iceland, 101 Reykjavik, Iceland
| | - Romain Aubonnet
- Institute of Biomedical and Neural Engineering, Reykjavik University, 101 Reykjavik, Iceland; (F.K.C.); (L.G.); (A.E.G.); (M.R.); (D.J.); (V.C.); (R.A.)
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Wang S, Hou Y, Li X, Meng X, Zhang Y, Wang X. Practical Implementation of Artificial Intelligence-Based Deep Learning and Cloud Computing on the Application of Traditional Medicine and Western Medicine in the Diagnosis and Treatment of Rheumatoid Arthritis. Front Pharmacol 2022; 12:765435. [PMID: 35002704 PMCID: PMC8733656 DOI: 10.3389/fphar.2021.765435] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2021] [Accepted: 12/09/2021] [Indexed: 12/23/2022] Open
Abstract
Rheumatoid arthritis (RA), an autoimmune disease of unknown etiology, is a serious threat to the health of middle-aged and elderly people. Although western medicine, traditional medicine such as traditional Chinese medicine, Tibetan medicine and other ethnic medicine have shown certain advantages in the diagnosis and treatment of RA, there are still some practical shortcomings, such as delayed diagnosis, improper treatment scheme and unclear drug mechanism. At present, the applications of artificial intelligence (AI)-based deep learning and cloud computing has aroused wide attention in the medical and health field, especially in screening potential active ingredients, targets and action pathways of single drugs or prescriptions in traditional medicine and optimizing disease diagnosis and treatment models. Integrated information and analysis of RA patients based on AI and medical big data will unquestionably benefit more RA patients worldwide. In this review, we mainly elaborated the application status and prospect of AI-assisted deep learning and cloud computation-oriented western medicine and traditional medicine on the diagnosis and treatment of RA in different stages. It can be predicted that with the help of AI, more pharmacological mechanisms of effective ethnic drugs against RA will be elucidated and more accurate solutions will be provided for the treatment and diagnosis of RA in the future.
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Affiliation(s)
- Shaohui Wang
- School of Ethnic Medicine, Chengdu University of Traditional Chinese Medicine, Chengdu, China
| | - Ya Hou
- School of Pharmacy, Chengdu University of Traditional Chinese Medicine, Chengdu, China
| | - Xuanhao Li
- Chengdu Second People's Hospital, Chengdu, China
| | - Xianli Meng
- State Key Laboratory of Southwestern Chinese Medicine Resources, Innovative Institute of Chinese Medicine and Pharmacy, Chengdu University of Traditional Chinese Medicine, Chengdu, China
| | - Yi Zhang
- School of Ethnic Medicine, Chengdu University of Traditional Chinese Medicine, Chengdu, China
| | - Xiaobo Wang
- State Key Laboratory of Southwestern Chinese Medicine Resources, Innovative Institute of Chinese Medicine and Pharmacy, Chengdu University of Traditional Chinese Medicine, Chengdu, China
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Owusu-Akyaw KA, Bido J, Warner T, Rodeo SA, Williams RJ. SF-36 Physical Component Score Is Predictive of Achieving a Clinically Meaningful Improvement after Osteochondral Allograft Transplantation of the Femur. Cartilage 2021; 13:853S-859S. [PMID: 32940050 PMCID: PMC8808818 DOI: 10.1177/1947603520958132] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
BACKGROUND Osteochondral allograft (OCA) transplantation is an increasingly common treatment for patients with symptomatic focal chondral lesions of the knee. There has been increasing interest in determining predictive factors to maximize patient benefit after this operation. The aim of the present study is to evaluate the predictive association of the physical component (PCS) and mental component (MCS) scores of the Short Form 36 (SF-36) questionnaire for achievement of the minimal clinically important difference (MCID) after OCA transplantation. METHODS This retrospective study of a longitudinally maintained institutional registry included 91 patients who had undergone OCA transplantation for symptomatic focal osteochondral lesions of the femoral condyle. Included patients were those with complete preoperative questionnaires for the SF-36 and IKDC and completed postoperative IKDC at 2-year follow-up. Multivariate analysis was performed evaluating predictive association of the preoperative MCS and PCS with achievement of the MCID for the IKDC questionnaire. RESULTS Logistic multivariate modeling demonstrated a statistically significant association between lower preoperative PCS and achievement of the MCID (P = 0.022). A defect diameter >2 cm was also associated with achievement of MCID (P = 0.049). Preoperative MCS did not demonstrate a significant association (P = 0.09) with achievement of the MCID. CONCLUSIONS For this cohort of 91 patients, the preoperative SF-36 PCS and lesion size were predictive of achievement of the MCID at 2-year follow-up after femoral OCA transplantation. These findings support an important role of baseline physical health scores for predicting which patients will obtain a meaningful clinical benefit from this surgery.
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Affiliation(s)
- Kwadwo A. Owusu-Akyaw
- Hospital for Special Surgery, New York,
NY, USA,Kwadwo A. Owusu-Akyaw, Hospital for Special
Surgery, 535 E 70th St, New York, NY 10021, USA.
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25
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Ntakolia C, Kokkotis C, Moustakidis S, Tsaopoulos D. Identification of most important features based on a fuzzy ensemble technique: Evaluation on joint space narrowing progression in knee osteoarthritis patients. Int J Med Inform 2021; 156:104614. [PMID: 34662820 DOI: 10.1016/j.ijmedinf.2021.104614] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2021] [Revised: 09/10/2021] [Accepted: 10/07/2021] [Indexed: 11/30/2022]
Abstract
OBJECTIVE Feature selection (FS) is a crucial and at the same time challenging processing step that aims to reduce the dimensionality of complex classification or regression problems. Various techniques have been proposed in the literature to address this challenge with emphasis to medical applications. However, each one of the existing FS algorithms come with its own advantages and disadvantages introducing a certain level of bias. MATERIALS AND METHODS To avoid bias and alleviate the defectiveness of single feature selection results, an ensemble FS methodology is proposed in this paper that aggregates the results of several FS algorithms (filter, wrapper and embedded ones). Fuzzy logic is employed to combine multiple feature importance scores thus leading to a more robust selection of informative features. The proposed fuzzy ensemble FS methodology was applied on the problem of knee osteoarthritis (KOA) prediction with special emphasis on the progression of joint space narrowing (JSN). The proposed FS methodology was integrated into an end-to-end machine learning pipeline and a thorough experimental evaluation was conducted using data from the Osteoarthritis Initiative (OAI) database. Several classifiers were investigated for their suitability in the task of JSN prediction and the best performing model was then post-hoc analyzed by using the SHAP method. RESULTS The results showed that the proposed method presented a better and more stable performance in contrast to other competitive feature selection methods, leading to an average accuracy of 78.14% using XG Boost at 31 selected features. The post-hoc explainability highlighted the important features that contribute to the classification of patients with JSN progression. CONCLUSIONS The proposed fuzzy feature selection approach improves the performance of the predictive models by selecting a small optimal subset of features compared to popular feature selection methods.
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Affiliation(s)
- Charis Ntakolia
- Hellenic National Center of COVID-19 Impact on Youth, University Mental Health Research Institute, Greece; School of Naval Architecture and Marine Engineering, National Technical University of Athens, 15772, Greece.
| | - Christos Kokkotis
- Institute for Bio-Economy and Agri-Technology, Center for Research and Technology Hellas, 38333, Greece; TEFAA, Department of Physical Education and Sport Science, University of Thessaly, 42100, Greece.
| | | | - Dimitrios Tsaopoulos
- Institute for Bio-Economy and Agri-Technology, Center for Research and Technology Hellas, 38333, Greece.
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26
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Sarvamangala DR, Kulkarni RV. Grading of Knee Osteoarthritis Using Convolutional Neural Networks. Neural Process Lett 2021. [DOI: 10.1007/s11063-021-10529-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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27
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Deng Y, You L, Wang Y, Zhou X. A Coarse-to-Fine Framework for Automated Knee Bone and Cartilage Segmentation Data from the Osteoarthritis Initiative. J Digit Imaging 2021; 34:833-840. [PMID: 34031789 PMCID: PMC8455760 DOI: 10.1007/s10278-021-00464-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2020] [Revised: 04/30/2021] [Accepted: 05/12/2021] [Indexed: 10/21/2022] Open
Abstract
Knee osteoarthritis (OA) is a degenerative joint disease that is prevalent in advancing age. The pathology of OA disease is still unclear, and there are no effective interventions that can completely alter the OA disease process. Magnetic resonance (MR) image evaluation is sensitive for depicting early changes of knee OA, and therefore important for early clinical intervention for relieving the symptom. Automated cartilage segmentation based on MR images is a vital step in experimental longitudinal studies to follow-up the patients and prospectively define a new quantitative marker from OA progression. In this paper, we develop a deep learning-based coarse-to-fine approach for automated knee bone, cartilage, and meniscus segmentation with high computational efficiency. The proposed method is evaluated using two-fold cross-validation on 507 MR volumes (81,120 slices) with OA from the Osteoarthritis Initiative (OAI)1 dataset. The mean dice similarity coefficients (DSCs) of femoral bone (FB), tibial bone (TB), femoral cartilage (FC), and tibial cartilage (TC) separately are 99.1%, 98.2%, 90.9%, and 85.8%. The time of segmenting each patient is 12 s, which is fast enough to be used in clinical practice. Our proposed approach may provide an automated toolkit to help computer-aided quantitative analyses of OA images.
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Affiliation(s)
- Yang Deng
- School of Biomedical Informatics, The University of Texas Health Science Center At Houston, Houston, TX 77030 USA
| | - Lei You
- School of Biomedical Informatics, The University of Texas Health Science Center At Houston, Houston, TX 77030 USA
| | - Yanfei Wang
- School of Biomedical Informatics, The University of Texas Health Science Center At Houston, Houston, TX 77030 USA
| | - Xiaobo Zhou
- School of Biomedical Informatics, The University of Texas Health Science Center At Houston, Houston, TX 77030 USA
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Klontzas ME, Volitakis E, Aydingöz Ü, Chlapoutakis K, Karantanas AH. Machine learning identifies factors related to early joint space narrowing in dysplastic and non-dysplastic hips. Eur Radiol 2021; 32:542-550. [PMID: 34136948 DOI: 10.1007/s00330-021-08070-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2021] [Revised: 04/28/2021] [Accepted: 05/11/2021] [Indexed: 12/22/2022]
Abstract
OBJECTIVES To utilise machine learning, unsupervised clustering and multivariate modelling in order to predict severe early joint space narrowing (JSN) from anatomical hip parameters while identifying factors related to joint space width (JSW) in dysplastic and non-dysplastic hips. METHODS A total of 507 hip CT examinations of patients 20-55 years old were retrospectively examined, and JSW, center-edge (CE) angle, alpha angle, anterior acetabular sector angle (AASA), and neck-shaft angle (NSA) were recorded. Dysplasia and severe JSN were defined with CE angle < 25o and JSW< 2 mm, respectively. A random forest classifier was developed to predict severe JSN based on anatomical and demographical data. Multivariate linear regression and two-step unsupervised clustering were performed to identify factors linked to JSW. RESULTS In dysplastic hips, lateral or anterior undercoverage alone was not correlated to JSN. AASA (p < 0.005) and CE angle (p < 0.032) were the only factors significantly correlated with JSN in dysplastic hips. In non-dysplastic hips, JSW was inversely correlated to CE angle, AASA, and age and positively correlated to NSA (p < 0.001). A random forest classifier predicted severe JSN (AUC 69.9%, 95%CI 47.9-91.8%). TwoStep cluster modelling identified two distinct patient clusters one with low and one with normal JSW and different anatomical characteristics. CONCLUSION Machine learning predicted severe JSN and identified population characteristics related to normal and abnormal joint space width. Dysplasia in one plane was found to be insufficient to cause JSN, highlighting the need for hip anatomy assessment on multiple planes. KEY POINTS • Neither anterior nor lateral acetabular dysplasia was sufficient to independently reduce joint space width in a multivariate linear regression model of dysplastic hips. • A random forest classifier was developed based on measurements and demographic parameters from 507 hip joints, achieving an area under the curve of 69.9% in the external validation set, in predicting severe joint space narrowing based on anatomical hip parameters and age. • Unsupervised TwoStep cluster analysis revealed two distinct population groups, one with low and one with normal joint space width, characterised by differences in hip morphology.
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Affiliation(s)
- Michail E Klontzas
- International Interdisciplinary Consensus Committee on DDH Evaluation (ICODE), Heraklion, Greece
- Department of Medical Imaging, University Hospital of Heraklion, Voutes, 71110, Crete, Greece
- Advanced Hybrid Imaging Systems, Institute of Computer Science, Foundation for Research and Technology (FORTH), Heraklion, Crete, Greece
- Department of Radiology, School of Medicine, University of Crete, Heraklion, Greece
| | - Emmanouil Volitakis
- Department of Medical Imaging, University Hospital of Heraklion, Voutes, 71110, Crete, Greece
- Department of Radiology, School of Medicine, University of Crete, Heraklion, Greece
| | - Üstün Aydingöz
- International Interdisciplinary Consensus Committee on DDH Evaluation (ICODE), Heraklion, Greece
- Department of Radiology, Hacettepe University School of Medicine, Sihhiye, 06100, Ankara, Turkey
| | - Konstantinos Chlapoutakis
- International Interdisciplinary Consensus Committee on DDH Evaluation (ICODE), Heraklion, Greece
- Department of Radiology, Vioapeikonisi Imaging Lab, Arkoleon 9, 71202, Heraklion, Greece
| | - Apostolos H Karantanas
- International Interdisciplinary Consensus Committee on DDH Evaluation (ICODE), Heraklion, Greece.
- Department of Medical Imaging, University Hospital of Heraklion, Voutes, 71110, Crete, Greece.
- Advanced Hybrid Imaging Systems, Institute of Computer Science, Foundation for Research and Technology (FORTH), Heraklion, Crete, Greece.
- Department of Radiology, School of Medicine, University of Crete, Heraklion, Greece.
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Kokkotis C, Moustakidis S, Baltzopoulos V, Giakas G, Tsaopoulos D. Identifying Robust Risk Factors for Knee Osteoarthritis Progression: An Evolutionary Machine Learning Approach. Healthcare (Basel) 2021; 9:260. [PMID: 33804560 PMCID: PMC8000487 DOI: 10.3390/healthcare9030260] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2021] [Revised: 02/22/2021] [Accepted: 02/23/2021] [Indexed: 12/27/2022] Open
Abstract
Knee osteoarthritis (KOA) is a multifactorial disease which is responsible for more than 80% of the osteoarthritis disease's total burden. KOA is heterogeneous in terms of rates of progression with several different phenotypes and a large number of risk factors, which often interact with each other. A number of modifiable and non-modifiable systemic and mechanical parameters along with comorbidities as well as pain-related factors contribute to the development of KOA. Although models exist to predict the onset of the disease or discriminate between asymptotic and OA patients, there are just a few studies in the recent literature that focused on the identification of risk factors associated with KOA progression. This paper contributes to the identification of risk factors for KOA progression via a robust feature selection (FS) methodology that overcomes two crucial challenges: (i) the observed high dimensionality and heterogeneity of the available data that are obtained from the Osteoarthritis Initiative (OAI) database and (ii) a severe class imbalance problem posed by the fact that the KOA progressors class is significantly smaller than the non-progressors' class. The proposed feature selection methodology relies on a combination of evolutionary algorithms and machine learning (ML) models, leading to the selection of a relatively small feature subset of 35 risk factors that generalizes well on the whole dataset (mean accuracy of 71.25%). We investigated the effectiveness of the proposed approach in a comparative analysis with well-known FS techniques with respect to metrics related to both prediction accuracy and generalization capability. The impact of the selected risk factors on the prediction output was further investigated using SHapley Additive exPlanations (SHAP). The proposed FS methodology may contribute to the development of new, efficient risk stratification strategies and identification of risk phenotypes of each KOA patient to enable appropriate interventions.
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Affiliation(s)
- Christos Kokkotis
- Institute for Bio-Economy & Agri-Technology, Center for Research and Technology Hellas, 60361 Volos, Greece;
- Department of Physical Education & Sport Science, University of Thessaly, 38221 Trikala, Greece;
| | | | - Vasilios Baltzopoulos
- Research Institute for Sport and Exercises Sciences, Liverpool John Moores University, Liverpool L3 3AF, UK;
| | - Giannis Giakas
- Department of Physical Education & Sport Science, University of Thessaly, 38221 Trikala, Greece;
| | - Dimitrios Tsaopoulos
- Institute for Bio-Economy & Agri-Technology, Center for Research and Technology Hellas, 60361 Volos, Greece;
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Ntakolia C, Kokkotis C, Moustakidis S, Tsaopoulos D. Prediction of Joint Space Narrowing Progression in Knee Osteoarthritis Patients. Diagnostics (Basel) 2021; 11:285. [PMID: 33670414 PMCID: PMC7917818 DOI: 10.3390/diagnostics11020285] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2020] [Revised: 02/03/2021] [Accepted: 02/09/2021] [Indexed: 02/08/2023] Open
Abstract
Osteoarthritis is a joint disease that commonly occurs in the knee (KOA). The continuous increase in medical data regarding KOA has triggered researchers to incorporate artificial intelligence analytics for KOA prognosis or treatment. In this study, two approaches are presented to predict the progression of knee joint space narrowing (JSN) in each knee and in both knees combined. A machine learning approach is proposed with the use of multidisciplinary data from the osteoarthritis initiative database. The proposed methodology employs: (i) A clustering process to identify groups of people with progressing and non-progressing JSN; (ii) a robust feature selection (FS) process consisting of filter, wrapper, and embedded techniques that identifies the most informative risk factors; (iii) a decision making process based on the evaluation and comparison of various classification algorithms towards the selection and development of the final predictive model for JSN; and (iv) post-hoc interpretation of the features' impact on the best performing model. The results showed that bounding the JSN progression of both knees can result to more robust prediction models with a higher accuracy (83.3%) and with fewer risk factors (29) compared to the right knee (77.7%, 88 risk factors) and the left knee (78.3%, 164 risk factors), separately.
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Affiliation(s)
- Charis Ntakolia
- Department of Computer Science and Biomedical Informatics, University of Thessaly, 35131 Lamia, Greece;
| | - Christos Kokkotis
- Institute for Bio-Economy & Agri-Technology, Center for Research and Technology Hellas, 38333 Volos, Greece;
- Department of Physical Education & Sport Science, University of Thessaly, 42100 Trikala, Greece
| | | | - Dimitrios Tsaopoulos
- Institute for Bio-Economy & Agri-Technology, Center for Research and Technology Hellas, 38333 Volos, Greece;
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Abstract
PURPOSE OF REVIEW Osteoarthritis is a major source of disability, pain and socioeconomic cost worldwide. The epidemiology of the disorder is multifactorial including genetic, biological and biomechanical components, some of them detectable by MRI. This review provides the most recent update on MRI biomarkers which can provide functional information of the joint structures for diagnosis, prognosis and treatment response monitoring in osteoarthritis trials. RECENT FINDINGS Compositional or functional MRI can provide clinicians with valuable information on glycosaminoglycan content (chemical exchange saturation transfer, sodium MRI, T1ρ) and collagen organization (T2, T2, apparent diffusion coefficient, magnetization transfer) in joint structures. Other parameters may also provide useful information, such as volumetric measurements of joint structures or advanced image data postprocessing and analysis. Automated tools seem to have a great potential to be included in these efforts providing standardization and acceleration of the image data analysis process. SUMMARY Functional or compositional MRI has great potential to provide noninvasive imaging biomarkers for osteoarthritis. Osteoarthritis as a whole joint condition needs to be diagnosed in early stages to facilitate selection of patients into clinical trials and/or to measure treatment effectiveness. Advanced evaluation including machine learning, neural networks and multidimensional data analysis allow for wall-to-wall understanding of parameter interactions and their role in clinical evaluation of osteoarthritis.
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32
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Wang Y, You L, Chyr J, Lan L, Zhao W, Zhou Y, Xu H, Noble P, Zhou X. Causal Discovery in Radiographic Markers of Knee Osteoarthritis and Prediction for Knee Osteoarthritis Severity With Attention-Long Short-Term Memory. Front Public Health 2020; 8:604654. [PMID: 33409263 PMCID: PMC7779681 DOI: 10.3389/fpubh.2020.604654] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2020] [Accepted: 11/09/2020] [Indexed: 01/08/2023] Open
Abstract
The goal of this study is to build a prognostic model to predict the severity of radiographic knee osteoarthritis (KOA) and to identify long-term disease progression risk factors for early intervention and treatment. We designed a long short-term memory (LSTM) model with an attention mechanism to predict Kellgren/Lawrence (KL) grade for knee osteoarthritis patients. The attention scores reveal a time-associated impact of different variables on KL grades. We also employed a fast causal inference (FCI) algorithm to estimate the causal relation of key variables, which will aid in clinical interpretability. Based on the clinical information of current visits, we accurately predicted the KL grade of the patient's next visits with 90% accuracy. We found that joint space narrowing was a major contributor to KOA progression. Furthermore, our causal structure model indicated that knee alignments may lead to joint space narrowing, while symptoms (swelling, grinding, catching, and limited mobility) have little impact on KOA progression. This study evaluated a broad spectrum of potential risk factors from clinical data, questionnaires, and radiographic markers that are rarely considered in previous studies. Using our statistical model, providers are able to predict the risk of the future progression of KOA, which will provide a basis for selecting proper interventions, such as proceeding to joint arthroplasty for patients. Our causal model suggests that knee alignment should be considered in the primary treatment and KOA progression was independent of clinical symptoms.
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Affiliation(s)
- Yanfei Wang
- School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, United States
| | - Lei You
- School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, United States
| | - Jacqueline Chyr
- School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, United States
| | - Lan Lan
- School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, United States
| | - Weiling Zhao
- School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, United States
| | - Yujia Zhou
- School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, United States
| | - Hua Xu
- School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, United States
| | - Philip Noble
- McGovern Medical School, University of Texas Health Science Center at Houston, Houston, TX, United States
| | - Xiaobo Zhou
- School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, United States.,McGovern Medical School, University of Texas Health Science Center at Houston, Houston, TX, United States
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Choudhury A, Renjilian E, Asan O. Use of machine learning in geriatric clinical care for chronic diseases: a systematic literature review. JAMIA Open 2020; 3:459-471. [PMID: 33215079 PMCID: PMC7660963 DOI: 10.1093/jamiaopen/ooaa034] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2020] [Revised: 06/26/2020] [Accepted: 07/11/2020] [Indexed: 12/13/2022] Open
Abstract
Objectives Geriatric clinical care is a multidisciplinary assessment designed to evaluate older patients’ (age 65 years and above) functional ability, physical health, and cognitive well-being. The majority of these patients suffer from multiple chronic conditions and require special attention. Recently, hospitals utilize various artificial intelligence (AI) systems to improve care for elderly patients. The purpose of this systematic literature review is to understand the current use of AI systems, particularly machine learning (ML), in geriatric clinical care for chronic diseases. Materials and Methods We restricted our search to eight databases, namely PubMed, WorldCat, MEDLINE, ProQuest, ScienceDirect, SpringerLink, Wiley, and ERIC, to analyze research articles published in English between January 2010 and June 2019. We focused on studies that used ML algorithms in the care of geriatrics patients with chronic conditions. Results We identified 35 eligible studies and classified in three groups: psychological disorder (n = 22), eye diseases (n = 6), and others (n = 7). This review identified the lack of standardized ML evaluation metrics and the need for data governance specific to health care applications. Conclusion More studies and ML standardization tailored to health care applications are required to confirm whether ML could aid in improving geriatric clinical care.
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Affiliation(s)
- Avishek Choudhury
- School of Systems and Enterprises, Stevens Institute of Technology, Hoboken, New Jersey, USA
| | - Emily Renjilian
- School of Systems and Enterprises, Stevens Institute of Technology, Hoboken, New Jersey, USA
| | - Onur Asan
- School of Systems and Enterprises, Stevens Institute of Technology, Hoboken, New Jersey, USA
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34
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Identification of Risk Factors and Machine Learning-Based Prediction Models for Knee Osteoarthritis Patients. APPLIED SCIENCES-BASEL 2020. [DOI: 10.3390/app10196797] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Abstract
Knee Osteoarthritis (KOA) is a multifactorial disease that causes low quality of life, poor psychology and resignation from life. Furthermore, KOA is a big data problem in terms of data complexity, heterogeneity and size as it has been commonly considered in the literature with most of the reported studies being limited in the amount of information they can adequately process. The aim of this paper is: (i) To provide a robust feature selection (FS) approach that could identify important risk factors which contribute to the prediction of KOA and (ii) to develop machine learning (ML) prediction models for KOA. The current study considers multidisciplinary data from the osteoarthritis initiative (OAI) database, the available features of which come from heterogeneous sources such as questionnaire data, physical activity indexes, self-reported data about joint symptoms, disability and function as well as general health and physical exams’ data. The novelty of the proposed FS methodology lies on the combination of different well-known approaches including filter, wrapper and embedded techniques, whereas feature ranking is decided on the basis of a majority vote scheme to avoid bias. The validation of the selected factors was performed in data subgroups employing seven well-known classifiers in five different approaches. A 74.07% classification accuracy was achieved by SVM on the group of the first fifty-five selected risk factors. The effectiveness of the proposed approach was evaluated in a comparative analysis with respect to classification errors and confusion matrices to confirm its clinical relevance. The results are the basis for the development of reliable tools for the prediction of KOA progression.
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35
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Machine learning in knee osteoarthritis: A review. OSTEOARTHRITIS AND CARTILAGE OPEN 2020; 2:100069. [DOI: 10.1016/j.ocarto.2020.100069] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2019] [Revised: 04/15/2020] [Accepted: 04/17/2020] [Indexed: 12/15/2022] Open
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36
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Mukherjee S, Nazemi M, Jonkers I, Geris L. Use of Computational Modeling to Study Joint Degeneration: A Review. Front Bioeng Biotechnol 2020; 8:93. [PMID: 32185167 PMCID: PMC7058554 DOI: 10.3389/fbioe.2020.00093] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2019] [Accepted: 01/31/2020] [Indexed: 12/13/2022] Open
Abstract
Osteoarthritis (OA), a degenerative joint disease, is the most common chronic condition of the joints, which cannot be prevented effectively. Computational modeling of joint degradation allows to estimate the patient-specific progression of OA, which can aid clinicians to estimate the most suitable time window for surgical intervention in osteoarthritic patients. This paper gives an overview of the different approaches used to model different aspects of joint degeneration, thereby focusing mostly on the knee joint. The paper starts by discussing how OA affects the different components of the joint and how these are accounted for in the models. Subsequently, it discusses the different modeling approaches that can be used to answer questions related to OA etiology, progression and treatment. These models are ordered based on their underlying assumptions and technologies: musculoskeletal models, Finite Element models, (gene) regulatory models, multiscale models and data-driven models (artificial intelligence/machine learning). Finally, it is concluded that in the future, efforts should be made to integrate the different modeling techniques into a more robust computational framework that should not only be efficient to predict OA progression but also easily allow a patient’s individualized risk assessment as screening tool for use in clinical practice.
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Affiliation(s)
- Satanik Mukherjee
- Prometheus, Division of Skeletal Tissue Engineering, KU Leuven, Leuven, Belgium.,Biomechanics Section, KU Leuven, Leuven, Belgium
| | - Majid Nazemi
- GIGA in silico Medicine, University of Liège, Liège, Belgium
| | - Ilse Jonkers
- Human Movement Biomechanics Research Group, Department of Movement Sciences, KU Leuven, Leuven, Belgium
| | - Liesbet Geris
- Prometheus, Division of Skeletal Tissue Engineering, KU Leuven, Leuven, Belgium.,Biomechanics Section, KU Leuven, Leuven, Belgium.,GIGA in silico Medicine, University of Liège, Liège, Belgium
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37
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A Deep Neural Network-Based Method for Early Detection of Osteoarthritis Using Statistical Data. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2019; 16:ijerph16071281. [PMID: 30974803 PMCID: PMC6480580 DOI: 10.3390/ijerph16071281] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/04/2019] [Revised: 03/29/2019] [Accepted: 04/07/2019] [Indexed: 11/25/2022]
Abstract
A large number of people suffer from certain types of osteoarthritis, such as knee, hip, and spine osteoarthritis. A correct prediction of osteoarthritis is an essential step to effectively diagnose and prevent severe osteoarthritis. Osteoarthritis is commonly diagnosed by experts through manual inspection of patients’ medical images, which are usually collected in hospitals. Checking the occurrence of osteoarthritis is somewhat time-consuming for patients. In addition, the current studies are focused on automatically detecting osteoarthritis through image-based deep learning algorithms. This needs patients’ medical images, which requires patients to visit the hospital. However, medical utilization and health behavior information as statistical data are easier to collect and access than medical images. Using indirect statistical data without any medical images to predict the occurrence of diverse forms of OA can have significant impacts on pro-active and preventive medical care. In this study, we used a deep neural network for detecting the occurrence of osteoarthritis using patient’s statistical data of medical utilization and health behavior information. The study was based on 5749 subjects. Principal component analysis with quantile transformer scaling was employed to generate features from the patients’ simple background medical records and identify the occurrence of osteoarthritis. Our experiments showed that the proposed method using deep neural network with scaled PCA resulted in 76.8% of area under the curve (AUC) and minimized the effort to generate features. Hence, this methos can be a promising tool for patients and doctors to prescreen for possible osteoarthritis to reduce health costs and patients’ time in hospitals.
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Chen VCH, Lin TY, Yeh DC, Chai JW, Weng JC. Predicting chemo-brain in breast cancer survivors using multiple MRI features and machine-learning. Magn Reson Med 2018; 81:3304-3313. [PMID: 30417933 DOI: 10.1002/mrm.27607] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2018] [Accepted: 10/22/2018] [Indexed: 12/15/2022]
Abstract
PURPOSE Breast cancer (BC) is the most common cancer in women worldwide. There exist various advanced chemotherapy drugs for BC; however, chemotherapy drugs may result in brain damage during treatment. When a patient's brain is changed in response to chemo drugs, it is termed chemo-brain. In this study, we aimed to construct machine-learning models to detect the subtle alternations of the brain in postchemotherapy BC patients. METHODS Nineteen BC patients undergoing chemotherapy and 20 healthy controls (HCs) were recruited for this study. Both groups underwent resting-state functional MRI and generalized q-sampling imaging (GQI). RESULTS Logistic regression (LR) with GQI indices in standardized voxel-wise analysis, LR with mean regional homogeneity in regional summation analysis, decision tree classifier (CART) with generalized fractional anisotropy in voxel-wise analysis, and XGBoost (XGB) with normalized quantitative anisotropy had formidable performances in classifying subjects into a chemo-brain group or an HC group. Classifying the brain MRIs of HC and postchemotherapy patients by conducting leave-one-out cross-validation resulted in the highest accuracy of 84%, which was attained by LR, CART, and XGB with multiple feature sets. CONCLUSIONS In our study, we constructed the machine-learning models that were able to identify chemo-brains from normal brains. We are hopeful that these results will be helpful in clinically tracking chemo-brains in the future.
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Affiliation(s)
- Vincent Chin-Hung Chen
- School of Medicine, Chang Gung University, Taoyuan, Taiwan.,Department of Psychiatry, Chang Gung Memorial Hospital, Chiayi, Taiwan
| | - Tung-Yeh Lin
- Department of Medical Imaging and Radiological Sciences, Chang Gung University, Taoyuan, Taiwan
| | - Dah-Cherng Yeh
- Breast Medical Center, Cheng Ching Hospital Chung Kang Branch, Taichung, Taiwan
| | - Jyh-Wen Chai
- Department of Radiology, Taichung Veterans General Hospital, Taichung, Taiwan.,College of Medicine, China Medical University, Taichung, Taiwan
| | - Jun-Cheng Weng
- Department of Psychiatry, Chang Gung Memorial Hospital, Chiayi, Taiwan.,Department of Medical Imaging and Radiological Sciences, Chang Gung University, Taoyuan, Taiwan
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