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Sun A, Chen X, Xu M, Zhang X, Chen X. Feasibility study on the application of a spiking neural network in myoelectric control systems. Front Neurosci 2023; 17:1174760. [PMID: 37378016 PMCID: PMC10291076 DOI: 10.3389/fnins.2023.1174760] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2023] [Accepted: 05/17/2023] [Indexed: 06/29/2023] Open
Abstract
In recent years, the effectiveness of a spiking neural network (SNN) for Electromyography (EMG) pattern recognition has been validated, but there is a lack of comprehensive consideration of the problems of heavy training burden, poor robustness, and high energy consumption in the application of actual myoelectric control systems. In order to explore the feasibility of the application of SNN in actual myoelectric control systems, this paper investigated an EMG pattern recognition scheme based on SNN. To alleviate the differences in EMG distribution caused by electrode shifts and individual differences, the adaptive threshold encoding was applied to gesture sample encoding. To improve the feature extraction ability of SNN, the leaky-integrate-and-fire (LIF) neuron that combines voltage-current effect was adopted as a spike neuron model. To balance recognition accuracy and power consumption, experiments were designed to determine encoding parameter and LIF neuron release threshold. By conducting the gesture recognition experiments considering different training test ratios, electrode shifts, and user independences on the nine-gesture high-density and low-density EMG datasets respectively, the advantages of the proposed SNN-based scheme have been verified. Compared with a Convolutional Neural Network (CNN), Long Short-Term Memory Network (LSTM) and Linear Discriminant Analysis (LDA), SNN can effectively reduce the number of repetitions in the training set, and its power consumption was reduced by 1-2 orders of magnitude. For the high-density and low-density EMG datasets, SNN improved the overall average accuracies by about (0.99 ~ 14.91%) under different training test ratios. For the high-density EMG dataset, the accuracy of SNN was improved by (0.94 ~ 13.76%) under electrode-shift condition and (3.81 ~ 18.95%) in user-independent case. The advantages of SNN in alleviating the user training burden, reducing power consumption, and improving robustness are of great significance for the implementation of user-friendly low-power myoelectric control systems.
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Wen G, Shim V, Holdsworth SJ, Fernandez J, Qiao M, Kasabov N, Wang A. Machine Learning for Brain MRI Data Harmonisation: A Systematic Review. Bioengineering (Basel) 2023; 10:bioengineering10040397. [PMID: 37106584 PMCID: PMC10135601 DOI: 10.3390/bioengineering10040397] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2023] [Revised: 03/16/2023] [Accepted: 03/21/2023] [Indexed: 04/29/2023] Open
Abstract
BACKGROUND Magnetic Resonance Imaging (MRI) data collected from multiple centres can be heterogeneous due to factors such as the scanner used and the site location. To reduce this heterogeneity, the data needs to be harmonised. In recent years, machine learning (ML) has been used to solve different types of problems related to MRI data, showing great promise. OBJECTIVE This study explores how well various ML algorithms perform in harmonising MRI data, both implicitly and explicitly, by summarising the findings in relevant peer-reviewed articles. Furthermore, it provides guidelines for the use of current methods and identifies potential future research directions. METHOD This review covers articles published through PubMed, Web of Science, and IEEE databases through June 2022. Data from studies were analysed based on the criteria of Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA). Quality assessment questions were derived to assess the quality of the included publications. RESULTS a total of 41 articles published between 2015 and 2022 were identified and analysed. In the review, MRI data has been found to be harmonised either in an implicit (n = 21) or an explicit (n = 20) way. Three MRI modalities were identified: structural MRI (n = 28), diffusion MRI (n = 7) and functional MRI (n = 6). CONCLUSION Various ML techniques have been employed to harmonise different types of MRI data. There is currently a lack of consistent evaluation methods and metrics used across studies, and it is recommended that the issue be addressed in future studies. Harmonisation of MRI data using ML shows promises in improving performance for ML downstream tasks, while caution should be exercised when using ML-harmonised data for direct interpretation.
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Affiliation(s)
- Grace Wen
- Auckland Bioengineering Institute, University of Auckland, Auckland 1142, New Zealand
| | - Vickie Shim
- Auckland Bioengineering Institute, University of Auckland, Auckland 1142, New Zealand
- Centre for Brain Research, University of Auckland, Auckland 1142, New Zealand
| | - Samantha Jane Holdsworth
- Centre for Brain Research, University of Auckland, Auckland 1142, New Zealand
- Mātai Medical Research Institute, Tairāwhiti-Gisborne 4010, New Zealand
- Department of Anatomy & Medical Imaging, Faculty of Medical and Health Sciences, University of Auckland, Auckland 1142, New Zealand
| | - Justin Fernandez
- Auckland Bioengineering Institute, University of Auckland, Auckland 1142, New Zealand
| | - Miao Qiao
- Department of Computer Science, University of Auckland, Auckland 1142, New Zealand
| | - Nikola Kasabov
- Auckland Bioengineering Institute, University of Auckland, Auckland 1142, New Zealand
- Knowledge Engineering and Discovery Research Institute, Auckland University of Technology, Auckland 1010, New Zealand
- Intelligent Systems Research Centre, Ulster University, Londonderry BT52 1SA, UK
- Institute for Information and Communication Technologies, Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria
| | - Alan Wang
- Auckland Bioengineering Institute, University of Auckland, Auckland 1142, New Zealand
- Centre for Brain Research, University of Auckland, Auckland 1142, New Zealand
- Department of Anatomy & Medical Imaging, Faculty of Medical and Health Sciences, University of Auckland, Auckland 1142, New Zealand
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Application of Genetic Algorithm and U-Net in Brain Tumor Segmentation and Classification: A Deep Learning Approach. COMPUTATIONAL INTELLIGENCE AND NEUROSCIENCE 2022; 2022:5625757. [PMID: 36156956 PMCID: PMC9499747 DOI: 10.1155/2022/5625757] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/27/2022] [Revised: 08/01/2022] [Accepted: 08/16/2022] [Indexed: 11/18/2022]
Abstract
The development of unusual cells in the cerebrum causes brain cancer. It is classified primarily into two classes: a noncarcinogenic (benign) type of growth and cancerous (malignant) growth. Early detection of this disease is a quintessential task for all medical practice professionals. For traditional approaches of tumor detections, certain limitations exist. They include less effectiveness, inability to detect due to low-quality processing of images, less dataset for training and testing, less predictive nature to models, and skipping of quintessential stages. All these lead to inaccurate results of tumor detections. To overcome this issue, this paper brings an effective deep learning technique for brain tumor detection with the following stages: (a) data collection from REMBRANDT dataset containing multisequence MRI of 130 patients; (b) preprocessing using conversion to greyscale, skull stripping, and histogram equalization; (c) segmentation uses genetic algorithm; (d) feature extraction using discrete wavelet transform (DWT); (e) particle swarm optimization technique for feature selection; (f) classification using U-Net. Experiment evaluation states that the proposed model (GA-UNET) outperforms (accuracy: 0.97, sensitivity: 0.98, specificity: 0.98) compared to other advanced models.
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Construction of Knowledge Graph of 3D Clothing Design Resources Based on Multimodal Clustering Network. COMPUTATIONAL INTELLIGENCE AND NEUROSCIENCE 2022; 2022:1168012. [PMID: 35694580 PMCID: PMC9184191 DOI: 10.1155/2022/1168012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Revised: 04/24/2022] [Accepted: 05/17/2022] [Indexed: 11/18/2022]
Abstract
The construction of 3D design model is a hotspot of applied research in the fields of clothing functional design system teaching and display. The simple 3D clothing visualization postprocessing lacks interactive functions, which is a hot issue that needs to be solved urgently at present. Based on analyzing the existing clothing modeling technology, template technology, and fusion technology, and based on the multimodal clustering network theory, this paper proposes a 3D clothing design resource knowledge graph modeling method with multiple fusion of features and templates. The position of each joint point is converted into the coordinate system centered on the torso point in advance and normalized to avoid the problem that the relative position of the camera and the collector cannot be determined, and the shape of different collectors is different. The paper provides a multimodal clustering network intelligence method, illustrates the interoperability of users switching between different design networks in the seamless connection movement, and combines the hybrid intelligence algorithm with the fuzzy logic interpretation algorithm to solve the problems in the field of 3D clothing design service quality. During the simulation process, the research scheme builds a logical multimodal clustering network framework, which integrates compatibility access and global access partition fusion of style templates to achieve information extraction of clothing parts. The experimental results show that the realistic 3D clothing modeling can be achieved by layering the 3D clothing map, contour features, clothing size features, and color texture features with the modeling template. The developed ActiveX control is mounted on MSN, and the system is compatible. The performance and integration rate reached 77.1% and 89.7%, respectively, which effectively strengthened the practical role of the 3D clothing design system.
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Intelligent Model for Brain Tumor Identification Using Deep Learning. APPLIED COMPUTATIONAL INTELLIGENCE AND SOFT COMPUTING 2022. [DOI: 10.1155/2022/8104054] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Brain tumors can be a major cause of psychiatric complications such as depression and panic attacks. Quick and timely recognition of a brain tumor is more effective in tumor healing. The processing of medical images plays a crucial role in assisting humans in identifying different diseases. The classification of brain tumors is a significant part that depends on the expertise and knowledge of the physician. An intelligent system for detecting and classifying brain tumors is essential to help physicians. The novel feature of the study is the division of brain tumors into glioma, meningioma, and pituitary using a hierarchical deep learning method. The diagnosis and tumor classification are significant for the quick and productive cure, and medical image processing using a convolutional neural network (CNN) is giving excellent outcomes in this capacity. CNN uses the image fragments to train the data and classify them into tumor types. Hierarchical Deep Learning-Based Brain Tumor (HDL2BT) classification is proposed with the help of CNN for the detection and classification of brain tumors. The proposed system categorizes the tumor into four types: glioma, meningioma, pituitary, and no-tumor. The suggested model achieves 92.13% precision and a miss rate of 7.87%, being superior to earlier methods for detecting and segmentation brain tumors. The proposed system will provide clinical assistance in the area of medicine.
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Spiking Neural Networks for Computational Intelligence: An Overview. BIG DATA AND COGNITIVE COMPUTING 2021. [DOI: 10.3390/bdcc5040067] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Deep neural networks with rate-based neurons have exhibited tremendous progress in the last decade. However, the same level of progress has not been observed in research on spiking neural networks (SNN), despite their capability to handle temporal data, energy-efficiency and low latency. This could be because the benchmarking techniques for SNNs are based on the methods used for evaluating deep neural networks, which do not provide a clear evaluation of the capabilities of SNNs. Particularly, the benchmarking of SNN approaches with regards to energy efficiency and latency requires realization in suitable hardware, which imposes additional temporal and resource constraints upon ongoing projects. This review aims to provide an overview of the current real-world applications of SNNs and identifies steps to accelerate research involving SNNs in the future.
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Ramirez-Quintana JA, Rangel-Gonzalez R, Chacon-Murguia MI, Ramirez-Alonso G. A visual object segmentation algorithm with spatial and temporal coherence inspired by the architecture of the visual cortex. Cogn Process 2021; 23:27-40. [PMID: 34779948 DOI: 10.1007/s10339-021-01065-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2021] [Accepted: 10/25/2021] [Indexed: 11/24/2022]
Abstract
Scene analysis in video sequences is a complex task for a computer vision system. Several schemes have been addressed in this analysis, such as deep learning networks or traditional image processing methods. However, these methods require thorough training or manual adjustment of parameters to achieve accurate results. Therefore, it is necessary to develop novel methods to analyze the scenario information in video sequences. For this reason, this paper proposes a method for object segmentation in video sequences inspired by the structural layers of the visual cortex. The method is called Neuro-Inspired Object Segmentation, SegNI. SegNI has a hierarchical architecture that analyzes object features such as edges, color, and motion to generate regions that represent the objects in the scenario. The results obtained with the Video Segmentation Benchmark VSB100 dataset demonstrate that SegNI can adapt automatically to videos with scenarios that have different nature, composition, and different types of objects. Also, SegNI adapts its processing to new scenario conditions without training, which is a significant advantage over deep learning networks.
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Affiliation(s)
- Juan A Ramirez-Quintana
- Graduate and Research Department, Tecnologico Nacional de Mexico / I.T. Chihuahua, Av. Tecnologico 2909, Chihuahua, 31310, Mexico.
| | | | - Mario I Chacon-Murguia
- Graduate and Research Department, Tecnologico Nacional de Mexico / I.T. Chihuahua, Av. Tecnologico 2909, Chihuahua, 31310, Mexico
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Design of MRI structured spiking neural networks and learning algorithms for personalized modelling, analysis, and prediction of EEG signals. Sci Rep 2021; 11:12064. [PMID: 34103545 PMCID: PMC8187669 DOI: 10.1038/s41598-021-90029-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2020] [Accepted: 04/09/2021] [Indexed: 12/04/2022] Open
Abstract
This paper proposes a novel method and algorithms for the design of MRI structured personalized 3D spiking neural network models (MRI-SNN) for a better analysis, modeling, and prediction of EEG signals. It proposes a novel gradient-descent learning algorithm integrated with a spike-time-dependent-plasticity algorithm. The models capture informative personal patterns of interaction between EEG channels, contrary to single EEG signal modeling methods or to spike-based approaches which do not use personal MRI data to pre-structure a model. The proposed models can not only learn and model accurately measured EEG data, but they can also predict signals at 3D model locations that correspond to non-monitored brain areas, e.g. other EEG channels, from where data has not been collected. This is the first study in this respect. As an illustration of the method, personalized MRI-SNN models are created and tested on EEG data from two subjects. The models result in better prediction accuracy and a better understanding of the personalized EEG signals than traditional methods due to the MRI and EEG information integration. The models are interpretable and facilitate a better understanding of related brain processes. This approach can be applied for personalized modeling, analysis, and prediction of EEG signals across brain studies such as the study and prediction of epilepsy, peri-perceptual brain activities, brain-computer interfaces, and others.
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Cheng L, Liu Y, Hou ZG, Tan M, Du D, Fei M. A Rapid Spiking Neural Network Approach With an Application on Hand Gesture Recognition. IEEE Trans Cogn Dev Syst 2021. [DOI: 10.1109/tcds.2019.2918228] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Muhammad K, Khan S, Ser JD, Albuquerque VHCD. Deep Learning for Multigrade Brain Tumor Classification in Smart Healthcare Systems: A Prospective Survey. IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS 2021; 32:507-522. [PMID: 32603291 DOI: 10.1109/tnnls.2020.2995800] [Citation(s) in RCA: 81] [Impact Index Per Article: 27.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Brain tumor is one of the most dangerous cancers in people of all ages, and its grade recognition is a challenging problem for radiologists in health monitoring and automated diagnosis. Recently, numerous methods based on deep learning have been presented in the literature for brain tumor classification (BTC) in order to assist radiologists for a better diagnostic analysis. In this overview, we present an in-depth review of the surveys published so far and recent deep learning-based methods for BTC. Our survey covers the main steps of deep learning-based BTC methods, including preprocessing, features extraction, and classification, along with their achievements and limitations. We also investigate the state-of-the-art convolutional neural network models for BTC by performing extensive experiments using transfer learning with and without data augmentation. Furthermore, this overview describes available benchmark data sets used for the evaluation of BTC. Finally, this survey does not only look into the past literature on the topic but also steps on it to delve into the future of this area and enumerates some research directions that should be followed in the future, especially for personalized and smart healthcare.
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Hong C, Wei X, Wang J, Deng B, Yu H, Che Y. Training Spiking Neural Networks for Cognitive Tasks: A Versatile Framework Compatible With Various Temporal Codes. IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS 2020; 31:1285-1296. [PMID: 31247574 DOI: 10.1109/tnnls.2019.2919662] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Recent studies have demonstrated the effectiveness of supervised learning in spiking neural networks (SNNs). A trainable SNN provides a valuable tool not only for engineering applications but also for theoretical neuroscience studies. Here, we propose a modified SpikeProp learning algorithm, which ensures better learning stability for SNNs and provides more diverse network structures and coding schemes. Specifically, we designed a spike gradient threshold rule to solve the well-known gradient exploding problem in SNN training. In addition, regulation rules on firing rates and connection weights are proposed to control the network activity during training. Based on these rules, biologically realistic features such as lateral connections, complex synaptic dynamics, and sparse activities are included in the network to facilitate neural computation. We demonstrate the versatility of this framework by implementing three well-known temporal codes for different types of cognitive tasks, namely, handwritten digit recognition, spatial coordinate transformation, and motor sequence generation. Several important features observed in experimental studies, such as selective activity, excitatory-inhibitory balance, and weak pairwise correlation, emerged in the trained model. This agreement between experimental and computational results further confirmed the importance of these features in neural function. This work provides a new framework, in which various neural behaviors can be modeled and the underlying computational mechanisms can be studied.
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Wang X, Lin X, Dang X. Supervised learning in spiking neural networks: A review of algorithms and evaluations. Neural Netw 2020; 125:258-280. [PMID: 32146356 DOI: 10.1016/j.neunet.2020.02.011] [Citation(s) in RCA: 43] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2019] [Revised: 12/15/2019] [Accepted: 02/20/2020] [Indexed: 01/08/2023]
Abstract
As a new brain-inspired computational model of the artificial neural network, a spiking neural network encodes and processes neural information through precisely timed spike trains. Spiking neural networks are composed of biologically plausible spiking neurons, which have become suitable tools for processing complex temporal or spatiotemporal information. However, because of their intricately discontinuous and implicit nonlinear mechanisms, the formulation of efficient supervised learning algorithms for spiking neural networks is difficult, and has become an important problem in this research field. This article presents a comprehensive review of supervised learning algorithms for spiking neural networks and evaluates them qualitatively and quantitatively. First, a comparison between spiking neural networks and traditional artificial neural networks is provided. The general framework and some related theories of supervised learning for spiking neural networks are then introduced. Furthermore, the state-of-the-art supervised learning algorithms in recent years are reviewed from the perspectives of applicability to spiking neural network architecture and the inherent mechanisms of supervised learning algorithms. A performance comparison of spike train learning of some representative algorithms is also made. In addition, we provide five qualitative performance evaluation criteria for supervised learning algorithms for spiking neural networks and further present a new taxonomy for supervised learning algorithms depending on these five performance evaluation criteria. Finally, some future research directions in this research field are outlined.
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Affiliation(s)
- Xiangwen Wang
- College of Computer Science and Engineering, Northwest Normal University, Lanzhou, 730070, People's Republic of China
| | - Xianghong Lin
- College of Computer Science and Engineering, Northwest Normal University, Lanzhou, 730070, People's Republic of China.
| | - Xiaochao Dang
- College of Computer Science and Engineering, Northwest Normal University, Lanzhou, 730070, People's Republic of China
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