Warming alters surface soil organic matter composition despite unchanged carbon stocks in a Tibetan permafrost ecosystem

Permafrost carbon cycle and its dynamics on the Tibetan Plateau

Our knowledge on permafrost carbon (C) cycle is crucial for understanding its feedback to climate warming and developing nature-based solutions for mitigating climate change. To understand the characteristics of permafrost C cycle on the Tibetan Plateau, the largest alpine permafrost region around the world, we summarized recent advances including the stocks and fluxes of permafrost C and their responses to thawing, and depicted permafrost C dynamics within this century. We find that this alpine permafrost region stores approximately 14.1 Pg (1 Pg=1015 g) of soil organic C (SOC) in the top 3 m. Both substantial gaseous emissions and lateral C transport occur across this permafrost region. Moreover, the mobilization of frozen C is expedited by permafrost thaw, especially by the formation of thermokarst landscapes, which could release significant amounts of C into the atmosphere and surrounding water bodies. This alpine permafrost region nevertheless remains an important C sink, and its capacity to sequester C will continue to increase by 2100. For future perspectives, we would suggest developing long-term in situ observation networks of C stocks and fluxes with improved temporal and spatial coverage, and exploring the mechanisms underlying the response of ecosystem C cycle to permafrost thaw. In addition, it is essential to improve the projection of permafrost C dynamics through in-depth model-data fusion on the Tibetan Plateau.

A global meta-analysis on the effects of organic and inorganic fertilization on grasslands and croplands

A central role for nature-based solution is to identify optimal management practices to address environmental challenges, including carbon sequestration and biodiversity conservation. Inorganic fertilization increases plant aboveground biomass but often causes a tradeoff with plant diversity loss. It remains unclear, however, whether organic fertilization, as a potential nature-based solution, could alter this tradeoff by increasing aboveground biomass without plant diversity loss. Here we compile data from 537 experiments on organic and inorganic fertilization across grasslands and croplands worldwide to evaluate the responses of aboveground biomass, plant diversity, and soil organic carbon (SOC). Both organic and inorganic fertilization increase aboveground biomass by 56% and 42% relative to ambient, respectively. However, only inorganic fertilization decreases plant diversity, while organic fertilization increases plant diversity in grasslands with greater soil water content. Moreover, organic fertilization increases SOC in grasslands by 19% and 15% relative to ambient and inorganic fertilization, respectively. The positive effect of organic fertilization on SOC increases with increasing mean annual temperature in grasslands, a pattern not observed in croplands. Collectively, our findings highlight organic fertilization as a potential nature-based solution that can increase two ecosystem services of grasslands, forage production, and soil carbon storage, without a tradeoff in plant diversity loss.

Soil moisture dynamics regulates the release rates and lability of copper in contaminated paddy soils

The climate changes have caused more extreme precipitation and drought events in the field and have exacerbated the severity of wet-dry events in soils, which will inevitably lead to severe fluctuations in soil moisture content. Soil moisture content has been recognized to influence the distribution of heavy metals, but how temporal changes of soil moisture dynamics affect the release rates and lability of heavy metals is still poorly understood, which precludes accurate prediction of environmental behavior and environmental risk of heavy metals in the field. In this study, we combined experimental and modeling approaches to quantify copper release rates and labile copper fractions in two paddy soils from southern China under different moisture conditions. Our kinetic data and models showed that the release rates and lability of copper were highly associated with the soil moisture contents, in which, surprisingly, high soil moisture contents effectively reduced the release rates of copper even with little changes in the reactive portions of copper in soils. A suite of comprehensive characterization on soil solid and solution components along the incubation suggested that soil microbes may regulate soil copper lability through forming microbially derived organic matter that sequestered copper and by increasing soil particle aggregation for protecting copper from release. This study highlights the importance of incorporating soil moisture dynamics into future environmental models. The experimental and modeling approaches in this study have provided basis for further developing predictive models applicable to paddy soils with varying soil moisture under the impact of climate change.

Carbon sequestration and storage capacity of Chinese fir at different stand ages

In southern China, Chinese fir Cunninghamia lanceolata is one of the most important native conifer trees, widely used in afforestation programs. This area has the largest forestland atmospheric carbon sink, and a relatively young stand age characterizes these forests. However, how C. lanceolata forests evolved regarding their ability to sequester carbon remains unclear. Here we present data on carbon storage and sequestration capacity of C. lanceolata at six stand ages (5-, 10-, 15-, 20-, 30- and 60 - year-old stands). Results show that the carbon stock in trees, understory, vegetation, litter, soil, and ecosystem significantly increased with forest age. The total ecosystem carbon stock increased from 129.11 to 348.43 Mg ha-1 in the 5- and 60 - year-old stands. The carbon sequestration rate of C. lanceolata shows an overall increase in the first two stand intervals (5-10 and 10-15), peaks in the 15-20 stand intervals, and then decreases in the 20-30 and 30-60 stand intervals. Our result revealed that carbon sequestration rate is a matter of tree age, with the highest sequestration rates occurring in the middle age forest (15-20 - year-old). Therefore, this information may be useful for national climate change mitigation actions and afforestation programs, since forests are primarily planted for this purpose.

Nitrogen addition stimulated soil respiration more so than carbon addition in alpine meadows

The soil carbon (C) and nitrogen (N) availability are important in the regulation of soil C cycling under climate change. Fertilizers alter soil C and N availability, which can affect C balance. However, the impact of fertilizers on C balance in grassland restoration has been equivocal and warrants more research. We determined the direct and indirect effects of the addition of three levels of C (sucrose) (0, 60, and 120 kg C ha-1 yr-1), three levels of N (urea) (0, 50, and 100 kg N ha-1 yr-1), and a combination of C plus N at each of the levels on soil respiration (Rs) dynamics and C balance in an alpine meadow in northern Tibet (4700 m above sea level). This study was undertaken during the middle of the growing season in 2011-2012. The addition of C and/or N stimulated CO2 emission, which was 2-fold greater in 2011 (102-144 g C m-2) than in 2012 (43-54 g C m-2). The rate of Rs increased with the addition of N, but was not affected with the addition of C plus N. Microbial biomass C, dissolved organic C and inorganic N were the main drivers of Rs. We concluded that N addition stimulated Rs to a greater extent than C addition in the short term. The application of fertilizer in the restoration of degraded grassland should be re-considered.

Novel insight into arsenic enrichment in aquifer sediments under different paleotemperatures from a molecular-level characterization of sedimentary organic matter

The heterogeneous distribution of As in sediments is governed by the abundance and type of SOM, which is closely associated with the depositional environment. However, few studies have revealed the effect of depositional environment (e.g., paleotemperature) on As sequestration and transport in sediments from the perspective of the molecular characteristics of sedimentary organic matter (SOM). In this study, we characterized the optical and molecular characteristics of SOM coupled with organic geochemical signatures to illustrate in detail the mechanisms of sedimentary As burial under different paleotemperatures. We identified that alternating paleotemperature changes result in the fluctuation of H-rich and H-poor organic matter in sediments. Further, we found aliphatic and saturated compounds with higher nominal oxidation state of carbon (NOSC) values predominate under high-paleotemperature (HT) conditions, while polycyclic aromatics and polyphenols with lower NOSC values accumulate under low-paleotemperature (LT) conditions. Under LT conditions, thermodynamically favorable organic compounds (higher NOSC values) are preferentially degraded by microorganisms to provide sufficient energy to sustain sulfate reduction, favoring sedimentary As sequestration. Under HT conditions, the energy gained from the decomposition of low NOSC value organic compounds approaches the energy required to sustain dissimilatory Fe reduction, leading to sedimentary As release into groundwater. This study provides molecular-scale evidence of SOM that indicates LT depositional environments favor sedimentary As burial and accumulation.

Nitrogen deposition further increases Ambrosia trifida root exudate invasiveness under global warming

Invasive plants can change the soil ecological environment in the invasion area to adapt to their growth and reproduction through root exudates. Root exudates are the most direct manifestation of plant responses to external environmental changes, but there is a lack of studies on root exudates of invasive plants in the context of inevitable global warming and nitrogen deposition. In this research, we used widely targeted metabolomics to investigate Ambrosia trifida root exudates during seedling and maturity under warming and nitrogen deposition to reveal the possible mechanisms of A. trifida adaptation to climate change. The results showed that the organic acids increased under warming condition but decreased after nitrogen addition in the seedling stage. Phenolic acids increased greatly after nitrogen addition in the mature stage. Most phenolic acids were annotated in the phenylpropane metabolic pathway and tyrosine metabolism. Therefore, nitrogen deposition may increase the adaptability of A. trifida through root exudates, making it more invasive under global warming. The results provide new ideas for preventing and controlling the invasion of A. trifida under climate change.

Experimental warming causes mismatches in alpine plant-microbe-fauna phenology

Long-term observations have shown that many plants and aboveground animals have changed their phenology patterns due to warmer temperatures over the past decades. However, empirical evidence for phenological shifts in alpine organisms, particularly belowground organisms, is scarce. Here, we investigate how the activities and phenology of plants, soil microbes, and soil fauna will respond to warming in an alpine meadow on the Tibetan Plateau, and whether their potential phenological changes will be synchronized. We experimentally simulate an increase in soil temperature by 2-4 °C according to future projections for this region. We find that warming promotes plant growth, soil microbial respiration, and soil fauna feeding by 8%, 57%, and 20%, respectively, but causes dissimilar changes in their phenology during the growing season. Specifically, warming advances soil faunal feeding activity in spring and delays it in autumn, while their peak activity does not change; whereas warming increases the peak activity of plant growth and soil microbial respiration but with only minor shifts in their phenology. Such phenological asynchrony in alpine organisms may alter ecosystem functioning and stability.

Warming changes the composition and diversity of fungal communities in permafrost

Purpose

It is the data support and theoretical basis for the response mechanism of soil fungi to climate warming in permafrost areas in the Greater Xing’an Mountains.

Methods

We collected permafrost from the Greater Xing’an Mountains for indoor simulation experiments and took the natural permafrost as the control (CK) and the test groups of 0 °C (T1), 2 °C (T2), and 4 °C (T3) were set. Illumina MiSeq high-throughput sequencing technology was used to understand the changes in characteristics of fungal communities, and the correlations were analyzed combined with the soil physicochemical properties.

Results

Compared with CK, the value of pH and the content of available potassium (AK) in the three warming treatment groups were significantly lower (P < 0.05), and the microbial biomass carbon (MBC) content was significantly higher (P < 0.05). The content of total nitrogen (TN) and available nitrogen (AN) in the T1 and T3 groups was significantly lower than that in the CK group (P < 0.05). A total of 11 phyla, 39 classes, 89 orders, 187 families, 361 genera, and 522 species were obtained through fungal sequencing and divided into 1463 amplicon sequence variants (ASVs). Ascomycota and Dimorphospora were the dominant phylum and genus, respectively, and there were differences in the response of relative abundance of various groups at the phylum and genus levels to warming. Warming significantly decreased the Sobs and ACE indexes of the treatment groups (P < 0.05), and the Shannon and Shannoneven indexes also showed a downward trend. Moreover, warming significantly changed the fungal beta diversity (P < 0.01), while the value of pH and the content of TN, MBC, and AK could significantly affect the community structure (P < 0.05), and the correlation between fungi at different phyla levels and soil physicochemical properties was different.

Conclusions

These results can provide a reference for further study on the changes in composition and structure of fungal communities and the influence factor in permafrost in the Greater Xing’an Mountains under the background of warming.

Apparent thermal acclimation of soil heterotrophic respiration mainly mediated by substrate availability

Multiple lines of existing evidence suggest that increasing CO₂ emission from soils in response to rising temperature could accelerate global warming. However, in experimental studies, the initial positive response of soil heterotrophic respiration (R_H ) to warming often weakens over time (referred to apparent thermal acclimation). If the decreased R_H is driven by thermal adaptation of soil microbial community, the potential for soil carbon (C) losses would be reduced substantially. In the meanwhile, the response could equally be caused by substrate depletion, and would then reflect the gradual loss of soil C. To address uncertainties regarding the causes of apparent thermal acclimation, we carried out sterilization and inoculation experiments using the soil samples from an alpine meadow with 6 years of warming and nitrogen (N) addition. We demonstrate that substrate depletion, rather than microbial adaptation, determined the response of R_H to long-term warming. Furthermore, N addition appeared to alleviate the apparent acclimation of R_H to warming. Our study provides strong empirical support for substrate availability being the cause of the apparent acclimation of soil microbial respiration to temperature. Thus, these mechanistic insights could facilitate efforts of biogeochemical modeling to accurately project soil C stocks in the future climate.

Divergent Trajectory of Soil Autotrophic and Heterotrophic Respiration upon Permafrost Thaw

Warming-induced permafrost thaw may stimulate soil respiration (Rs) and thus cause a positive feedback to climate warming. However, due to the limited in situ observations, it remains unclear about how Rs and its autotrophic (Ra) and heterotrophic (Rh) components change upon permafrost thaw. Here we monitored variations in Rs and its components along a permafrost thaw sequence on the Tibetan Plateau, and explored the potential linkage of Rs components (i.e., Ra and Rh) with biotic (e.g., plant functional traits and soil microbial diversity) and abiotic factors (e.g., substrate quality). We found that Ra and Rh exhibited divergent responses to permafrost collapse: Ra increased with the time of thawing, while Rh exhibited a hump-shaped pattern along the thaw sequence. We also observed different drivers of thaw-induced changes in the ratios of Ra:Rs and Rh:Rs. Except for soil water status, plant community structure, diversity, and root properties explained the variation in Ra:Rs ratio, soil substrate quality and microbial diversity were key factors associated with the dynamics of Rh:Rs ratio. Overall, these findings demonstrate divergent patterns and drivers of Rs components as permafrost thaw prolongs, which call for considerations in Earth system models for better forecasting permafrost carbon-climate feedback.

Warming and elevated CO2 promote rapid incorporation and degradation of plant-derived organic matter in an ombrotrophic peatland

Rising temperatures have the potential to directly affect carbon cycling in peatlands by enhancing organic matter (OM) decomposition, contributing to the release of CO₂ and CH₄ to the atmosphere. In turn, increasing atmospheric CO₂ concentration may stimulate photosynthesis, potentially increasing plant litter inputs belowground and transferring carbon from the atmosphere into terrestrial ecosystems. Key questions remain about the magnitude and rate of these interacting and opposing environmental change drivers. Here, we assess the incorporation and degradation of plant- and microbe-derived OM in an ombrotrophic peatland after 4 years of whole-ecosystem warming (+0, +2.25, +4.5, +6.75 and +9°C) and two years of elevated CO₂  manipulation (500 ppm above ambient). We show that OM molecular composition was substantially altered in the aerobic acrotelm, highlighting the sensitivity of acrotelm carbon to rising temperatures and atmospheric CO₂ concentration. While warming accelerated OM decomposition under ambient CO₂ , new carbon incorporation into peat increased in warming × elevated CO₂ treatments for both plant- and microbe-derived OM. Using the isotopic signature of the applied CO₂ enrichment as a label for recently photosynthesized OM, our data demonstrate that new plant inputs have been rapidly incorporated into peat carbon. Our results suggest that under current hydrological conditions, rising temperatures and atmospheric CO₂  levels will likely offset each other in boreal peatlands.

Impacts of Permafrost Degradation on Carbon Stocks and Emissions under a Warming Climate: A Review

A huge amount of carbon (C) is stored in permafrost regions. Climate warming and permafrost degradation induce gradual and abrupt carbon emissions into both the atmosphere and hydrosphere. In this paper, we review and synthesize recent advances in studies on carbon stocks in permafrost regions, biodegradability of permafrost organic carbon (POC), carbon emissions, and modeling/projecting permafrost carbon feedback to climate warming. The results showed that: (1) A large amount of organic carbon (1460–1600 PgC) is stored in permafrost regions, while there are large uncertainties in the estimation of carbon pools in subsea permafrost and in clathrates in terrestrial permafrost regions and offshore clathrate reservoirs; (2) many studies indicate that carbon pools in Circum-Arctic regions are on the rise despite the increasing release of POC under a warming climate, because of enhancing carbon uptake of boreal and arctic ecosystems; however, some ecosystem model studies indicate otherwise, that the permafrost carbon pool tends to decline as a result of conversion of permafrost regions from atmospheric sink to source under a warming climate; (3) multiple environmental factors affect the decomposability of POC, including ground hydrothermal regimes, carbon/nitrogen (C/N) ratio, organic carbon contents, and microbial communities, among others; and (4) however, results from modeling and projecting studies on the feedbacks of POC to climate warming indicate no conclusive or substantial acceleration of climate warming from POC emission and permafrost degradation over the 21st century. These projections may potentially underestimate the POC feedbacks to climate warming if abrupt POC emissions are not taken into account. We advise that studies on permafrost carbon feedbacks to climate warming should also focus more on the carbon feedbacks from the rapid permafrost degradation, such as thermokarst processes, gas hydrate destabilization, and wildfire-induced permafrost degradation. More attention should be paid to carbon emissions from aquatic systems because of their roles in channeling POC release and their significant methane release potentials.

Plant and microbial regulations of soil carbon dynamics under warming in two alpine swamp meadow ecosystems on the Tibetan Plateau

Increasing temperature plays important roles in affecting plant and soil microbial communities as well as ecological processes and functions in terrestrial ecosystems. However, mechanisms of warming influencing soil carbon dynamics associated with plant-microbe interactions remain unclear. In this study, open-top chambers (OTCs) experiments were carried out to detect the responses of plants, soil microbes, and SOC contents, physical fractions (by particle-size fractionation) and chemical composition (by solid-state ¹³C NMR spectroscopy) to warming in two alpine swamp meadows (Kobresia humilis vs K. tibetica) on the Tibetan Plateau. Our results showed that four years of warming had significant influences on plant belowground biomass, microbial community and SOC contents in the K. humilis swamp meadow, but had much weaker or minor effects in the K. tibetica swamp meadow with water-logged status and lower level of warming. In the K. humilis swamp meadow, warming increased microbial biomass, C-hydrolysis gene abundance and N-acetylglucosaminidase enzyme activity. These positive effects of warming on microbial biomass and functions further increased soil dissolved inorganic nitrogen and alleviated the nitrogen limitation for plant growth, potentially leading to higher plant biomass. Therefore, increases in SOC and particulate organic carbon (POC) under warming were likely attributed to the higher C input with promoted plant biomass overweighting the simultaneous higher C degradation and release in the K. humilis swamp meadow. Conversely, warming marginally reduced soil alkyl C, which was likely associated with enhanced decomposition by fungi and gram-positive bacteria. Overall, the increases in unprotected POC and decreases in recalcitrant alkyl C demonstrate the sensitivity of SOC physical fractions as well as chemical composition to climate warming in the K. humilis alpine swamp meadow, and suggest that the overall stability of SOC might be lower despite the gain in the content of SOC after climate warming in this alpine swamp meadow.