Fluorescent nanoparticles as tools in ecology and physiology

Comparison of Toxicity and Cellular Uptake of CdSe/ZnS and Carbon Quantum Dots for Molecular Tracking Using Saccharomyces cerevisiae as a Fungal Model

Plant resource sharing mediated by mycorrhizal fungi has been a subject of recent debate, largely owing to the limitations of previously used isotopic tracking methods. Although CdSe/ZnS quantum dots (QDs) have been successfully used for in situ tracking of essential nutrients in plant-fungal systems, the Cd-containing QDs, due to the intrinsic toxic nature of Cd, are not a viable system for larger-scale in situ studies. We synthesized amino acid-based carbon quantum dots (CQDs; average hydrodynamic size 6 ± 3 nm, zeta potential -19 ± 12 mV) and compared their toxicity and uptake with commercial CdSe/ZnS QDs that we conjugated with the amino acid cysteine (Cys) (average hydrodynamic size 308 ± 150 nm, zeta potential -65 ± 4 mV) using yeast Saccharomyces cerevisiae as a proxy for mycorrhizal fungi. We showed that the CQDs readily entered yeast cells and were non-toxic up to 100 mg/L. While the Cys-conjugated CdSe/ZnS QDs were also not toxic to yeast cells up to 100 mg/L, they were not taken up into the cells but remained on the cell surfaces. These findings suggest that CQDs may be a suitable tool for molecular tracking in fungi (incl. mychorrhizal fungi) due to their ability to enter fungal cells.

An update on the biological effects of quantum dots: From environmental fate to risk assessment based on multiple biological models

Quantum dots (QDs) are zero-dimension nanomaterials with excellent physical and chemical properties, which have been widely used in environmental science and biomedicine. Therefore, QDs are potential to cause toxicity to the environment and enter organisms through migration and bioenrichment effects. This review aims to provide a comprehensive and systematic analysis on the adverse effects of QDs in different organisms based on recently available data. Following PRISMA guidelines, this study searched PubMed database according to the pre-set keywords, and included 206 studies according to the inclusion and elimination criteria. CiteSpace software was firstly used to analyze the keywords of included literatures, search for breaking points of former studies, and summarize the classification, characterization and dosage of QDs. The environment fate of QDs in the ecosystems were then analyzed, followed with comprehensively summarized toxicity outcomes at individual, system, cell, subcellular and molecular levels. After migration and degradation in the environment, aquatic plants, bacteria, fungi as well as invertebrates and vertebrates have been found to be suffered from toxic effects caused by QDs. Aside from systemic effects, toxicity of intrinsic QDs targeting to specific organs, including respiratory system, cardiovascular system, hepatorenal system, nervous system and immune system were confirmed in multiple animal models. Moreover, QDs could be taken up by cells and disturb the organelles, which resulted in cellular inflammation and cell death, including autophagy, apoptosis, necrosis, pyroptosis and ferroptosis. Recently, several innovative technologies, like organoids have been applied in the risk assessment of QDs to promote the surgical interventions of preventing QDs' toxicity. This review not only aimed at updating the research progress on the biological effects of QDs from environmental fate to risk assessment, but also overcame the limitations of available reviews on basic toxicity of nanomaterials by interdisciplinarity and provided new insights for better applications of QDs.

Positive citation bias and overinterpreted results lead to misinformation on common mycorrhizal networks in forests

A common mycorrhizal network (CMN) is formed when mycorrhizal fungal hyphae connect the roots of multiple plants of the same or different species belowground. Recently, CMNs have captured the interest of broad audiences, especially with respect to forest function and management. We are concerned, however, that recent claims in the popular media about CMNs in forests are disconnected from evidence, and that bias towards citing positive effects of CMNs has developed in the scientific literature. We first evaluated the evidence supporting three common claims. The claims that CMNs are widespread in forests and that resources are transferred through CMNs to increase seedling performance are insufficiently supported because results from field studies vary too widely, have alternative explanations or are too limited to support generalizations. The claim that mature trees preferentially send resources and defence signals to offspring through CMNs has no peer-reviewed, published evidence. We next examined how the results from CMN research are cited and found that unsupported claims have doubled in the past 25 years; a bias towards citing positive effects may obscure our understanding of the structure and function of CMNs in forests. We conclude that knowledge on CMNs is presently too sparse and unsettled to inform forest management.

Nanomaterials for Fluorescence and Multimodal Bioimaging

Bioconjugated nanomaterials replace molecular probes in bioanalysis and bioimaging in vitro and in vivo. Nanoparticles of silica, metals, semiconductors, polymers, and supramolecular systems, conjugated with contrast agents and drugs for image-guided (MRI, fluorescence, PET, Raman, SPECT, photodynamic, photothermal, and photoacoustic) therapy infiltrate into preclinical and clinical settings. Small bioactive molecules like peptides, proteins, or DNA conjugated to the surfaces of drugs or probes help us to interface them with cells and tissues. Nevertheless, the toxicity and pharmacokinetics of nanodrugs, nanoprobes, and their components become the clinical barriers, underscoring the significance of developing biocompatible next-generation drugs and contrast agents. This account provides state-of-the-art advancements in the preparation and biological applications of bioconjugated nanomaterials and their molecular, cell, and in vivo applications. It focuses on the preparation, bioimaging, and bioanalytical applications of monomodal and multimodal nanoprobes composed of quantum dots, quantum clusters, iron oxide nanoparticles, and a few rare earth metal ion complexes.

Stimulus-Responsive DNA Hydrogel Biosensors for Food Safety Detection

Food safety has always been a major global challenge to human health and the effective detection of harmful substances in food can reduce the risk to human health. However, the food industry has been plagued by a lack of effective and sensitive safety monitoring methods due to the tension between the cost and effectiveness of monitoring. DNA-based hydrogels combine the advantages of biocompatibility, programmability, the molecular recognition of DNA molecules, and the hydrophilicity of hydrogels, making them a hotspot in the research field of new nanomaterials. The stimulus response property greatly broadens the function and application range of DNA hydrogel. In recent years, DNA hydrogels based on stimulus-responsive mechanisms have been widely applied in the field of biosensing for the detection of a variety of target substances, including various food contaminants. In this review, we describe the recent advances in the preparation of stimuli-responsive DNA hydrogels, highlighting the progress of its application in food safety detection. Finally, we also discuss the challenges and future application of stimulus-responsive DNA hydrogels.

Fluorescent labeling as a strategy to evaluate uptake and transport of polymeric nanoparticles in plants

The use of biodegradable nanopolymers in agriculture offers an excellent alternative for the efficient delivery of agrochemicals that promote plant protection and development. However, tracking of these systems inside plants requires complex probe tagging strategies. In addition to providing a basis for better understanding such nanostructures to optimize delivery system design, these probes allow monitoring the migration of nanoparticles through plant tissues, and determine accumulation sites. Thus, these probes are powerful tools that can be used to quantify and visualize nanoparticle accumulation in plant cells and tissues. This review is an overview of the methods involved in labeling nanocarriers, mainly based on polymeric matrices, for the delivery of nanoagrochemicals and the recent advances in this field.

Fluorescence Imaging, Metabolism, and Biodistribution of Biocompatible Carbon Dots Synthesized Using Punica granatum L. Peel

In this study, a green, low-cost strategy is reported for the synthesis of carbon dots (CDs) using Punica granatum L. A systematic metabolic analysis and determination of the biodistribution of the nitrogen-doped carbon dots was conducted in vivo in mice. Fluorescence images of carbon dots in the whole body, in individual organs (kidney, gallbladder, and bladder), and in two cell lines from different tissue sources were observed. The results suggest not only that the carbon dots are fluorescent in solution, as reported previously, but also that they behave well as contrast agents in live mice. Moreover, metabolic process curves of carbon dots in blood and urine were obtained for the first time. Unlike quantum dots, which can persist in the body for more than 7 days, the carbon dots diffused and were excreted very quickly after injection into mice; within 3 min, fluorescence could be observed in blood, tissue and urine, indicating the rapid distribution of CDs. The fluorescence faded by approximately 4 h in organs and by approximately 10 h in urine, indicating that the CDs were excreted completely in half a day. Our results on the absorption, distribution, metabolism, and excretion of carbon dots may have great significance for the application of these CDs in drug delivery, as drug targets, and for biological imaging. We also demonstrated that these CDs have good biocompatibility for use in studies of mother-child barriers and in fluorescence imaging in plants.

Decreasing relatedness among mycorrhizal fungi in a shared plant network increases fungal network size but not plant benefit

Theory suggests that relatives will cooperate more, and compete less, because of an increased benefit for shared genes. In symbiotic partnerships, hosts may benefit from interacting with highly related symbionts because there is less conflict among the symbionts. This has been difficult to test empirically. We used the arbuscular mycorrhizal symbiosis to study the effects of fungal relatedness on host and fungal benefits, creating fungal networks varying in relatedness between two hosts, both in soil and in‐vitro. To determine how fungal relatedness affected overall transfer of nutrients, we fluorescently tagged phosphorus and quantified resource distribution between two root systems. We found that colonization by less‐related fungi was associated with increased fungal growth, lower transport of nutrients across the network, and lower plant benefit ‐ likely an outcome of increased fungal competition. More generally, we demonstrate how symbiont relatedness can mediate benefits of symbioses.