1
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Bora U, Abdallah S, Mhanna R, Nicolas P, Dok A, de Coene Y, Van Cleuvenbergen S, Jeannin O, Malval JP, Clays K, Bellec N, Ocak H, Bilgin-Eran B, Camerel F, Akdas-Kiliç H. New Multifunctional Bipyrimidine-Based Chromophores for NLO-Active Thin-Film Preparation. Chemistry 2024; 30:e202302930. [PMID: 37926677 DOI: 10.1002/chem.202302930] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2023] [Revised: 10/31/2023] [Accepted: 11/02/2023] [Indexed: 11/07/2023]
Abstract
New synthesized bipyrimidine-based chromophores presenting alkoxystyryl donor groups carrying aliphatic achiral and chiral chains in the 4 position, connected to electron-accepting 2,2-bipyrimidine cores have been synthesized. Their linear and nonlinear optical (NLO) properties were investigated as well as their mesomorphic properties by various techniques (light-transmission measurements, polarized-light optical microscopy, differential scanning calorimetry measurements and two-photon excited fluorescence). The derivatives with achiral linear carbon chains were found to exhibit liquid-crystal properties with the formation smectic phases over large temperature ranges, which were confirmed by small-angle X-ray scattering analysis via stacking models. The nonlinear optical properties in the solid state for derivatives with C14 and the citronellol chains have been studied by wide-field second-harmonic generation and multi-photon fluorescence imaging, confirming centrosymmetry for these achiral mesogens and their excellent third-order nonlinearity whereas the chiral compound exhibits non-centrosymmetric organization resulting in a strong Second Harmonic Generation at the crystal state.
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Affiliation(s)
- Umut Bora
- Department of Chemistry, Yildiz Technical University, Istanbul, Turkey
| | - Stephania Abdallah
- Institut de Science des Matériaux de Mulhouse CNRS-UMR 7361, Université de Haute Alsace, Mulhouse, France
| | - Rana Mhanna
- Institut de Science des Matériaux de Mulhouse CNRS-UMR 7361, Université de Haute Alsace, Mulhouse, France
| | - Prescillia Nicolas
- Institut des Sciences Chimiques de Rennes CNRS UMR, Université de Rennes, Rennes, France
| | - Ahmet Dok
- Department of Chemistry, Katholieke Universiteit Leuven, Leuven, Belgium
| | - Yovan de Coene
- Department of Chemistry, Katholieke Universiteit Leuven, Leuven, Belgium
| | | | - Olivier Jeannin
- Institut des Sciences Chimiques de Rennes CNRS UMR, Université de Rennes, Rennes, France
| | - Jean-Pierre Malval
- Institut de Science des Matériaux de Mulhouse CNRS-UMR 7361, Université de Haute Alsace, Mulhouse, France
| | - Koen Clays
- Department of Chemistry, Katholieke Universiteit Leuven, Leuven, Belgium
| | - Nathalie Bellec
- Institut des Sciences Chimiques de Rennes CNRS UMR, Université de Rennes, Rennes, France
| | - Hale Ocak
- Department of Chemistry, Yildiz Technical University, Istanbul, Turkey
| | | | - Franck Camerel
- Institut des Sciences Chimiques de Rennes CNRS UMR, Université de Rennes, Rennes, France
| | - Huriye Akdas-Kiliç
- Department of Chemistry, Yildiz Technical University, Istanbul, Turkey
- Institut des Sciences Chimiques de Rennes CNRS UMR, Université de Rennes, Rennes, France
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2
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Vatankhah E, Akbarzadeh M, Jabbari A, Saadat K, Shiri A. Synthesis and Characterization of Various Novel Derivatives of Dipyrimido[4,5-b:4',5'-e][1,4]thiazepine and Their Theoretical Evaluation as 15-Lipoxygenase Inhibitor. Polycycl Aromat Compd 2022. [DOI: 10.1080/10406638.2021.2014536] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- Effat Vatankhah
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Marzieh Akbarzadeh
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Atena Jabbari
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Kayvan Saadat
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Ali Shiri
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran
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3
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Fast and efficient regioselective synthesis of a novel eight membered ring system, 5H-benzo[f]pyrimido[4,5-b][1,5]oxazocine. MONATSHEFTE FUR CHEMIE 2021. [DOI: 10.1007/s00706-021-02758-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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4
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Karimian A. Synthesis of New Pyrimido[5′,4′:5,6][1,4]thiazino[2,3-b]quinoxaline Derivatives in One Step. J Heterocycl Chem 2018. [DOI: 10.1002/jhet.3082] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Affiliation(s)
- Azam Karimian
- Department of Chemistry, Faculty of Science; University of Gonabad; Gonabad Iran
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5
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Karimian A, Karimian H. Synthesis of new derivatives of 4-(4-methyl-5 H-pyrimido[4,5- b][1,4]thiazin-2-yl)morpholine and 4-methyl-2-(piperidin-1-yl)-5 H-pyrimido[4,5- b][1,4]thiazine. JOURNAL OF CHEMICAL RESEARCH 2017. [DOI: 10.3184/174751917x14967701767049] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Several derivatives of the novel 4-(4-methyl-5 H-pyrimido[4,5- b][1,4]thiazin-2-yl)morpholine and 4-methyl-2-(piperidin-1-yl)-5 H-pyrimido[4,5- b][1,4]thiazine ring systems have been synthesised through cyclocondensation of 5-amino-6-methylpyrimidine-4-thiols and the appropriate α-haloketone in glacial acetic acid under reflux.
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Affiliation(s)
- Azam Karimian
- Department of Chemistry, Faculty of Sciences, University of Gonabad, Gonabad, Iran
| | - Hassan Karimian
- Department of Environment, Faculty of Environment, University of Tehran, Tehran, Iran
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6
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Afrough T, Bakavoli M, Eshghi H. Synthesis and characterisation of new 3-methyl-6-[1-(pyrimidin-4-yl)ethyl]-5H-pyrimido[5,4-e][1,2,4]triazolo[3,4-b][1,3,4]thiadiazine derivatives. JOURNAL OF CHEMICAL RESEARCH 2017. [DOI: 10.3184/174751917x14967701766978] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
A new series of 3-methyl-6-[1-(pyrimidin-4-yl)ethyl]-5 H-pyrimido[5,4- e][1,2,4]triazolo[3,4- b][1,3,4]thiadiazine derivatives was synthesised through the condensation reaction of 5-bromo-4-[1-(5-bromo-2,6-dichloropyrimidin-4-yl)ethyl]-2-chloro-6-methylpyrimidine and 4-amino-5-methyl-4 H-1,2,4-triazole-3-thiol.
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Affiliation(s)
- T. Afrough
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, 91775-1436 Mashhad, Iran
| | - M. Bakavoli
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, 91775-1436 Mashhad, Iran
| | - H. Eshghi
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, 91775-1436 Mashhad, Iran
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7
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Firoozi N, Bakavoli M, Eshghi H, Ramezanian N. Regioselective synthesis of new 5-methyl-5H-pyrimido[4′,5′:4,5][1,3]thiazino [3,2-a]perimidines. J Sulphur Chem 2017. [DOI: 10.1080/17415993.2017.1318877] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- Neda Firoozi
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Mehdi Bakavoli
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Hossein Eshghi
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Navid Ramezanian
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran
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8
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Preliminary SAR and biological evaluation of antitubercular triazolothiadiazine derivatives against drug-susceptible and drug-resistant Mtb strains. Bioorg Med Chem 2017; 25:213-220. [DOI: 10.1016/j.bmc.2016.10.027] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2016] [Revised: 10/15/2016] [Accepted: 10/20/2016] [Indexed: 11/23/2022]
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Mozafari S, Shiri A, Bakavoli M, Akbarzadeh M, Saadat K, Etemadi Y. Synthesis and Density Functional Theory Study of [1,2,3]Triazolo[4,5-d][1,2,4] Triazolo[4,3-a]Pyrimidine Derivatives: A Novel Heterocyclic System. JOURNAL OF CHEMICAL RESEARCH 2016. [DOI: 10.3184/174751916x14743011878429] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Several 3H-[1,2,3]triazolo[4,5-d][1,2,4]triazolo[4,3-a]pyrimidine derivatives of a novel ring system have been synthesised. The initial substitution of the 4-Cl function of 2,4-dichloro-6-methylpyrimidin-5-amine with benzylamine followed by treatment with sodium nitrite generated 3-benzyl-5-chloro-7-methyl-3H-[1,2,3]triazolo[4,5-d]pyrimidine. Nucleophilic substitution of the 5-Cl moiety of the latter compound with hydrazine hydrate and subsequent treatment with carbon disulfide in boiling pyridine gave, quantitatively, the corresponding [1,2,3]triazolo[4,5-d][1,2,4]triazolo[4,3-a]pyrimidine derivatives. Density functional theory (DFT) studies were also performed to reveal regioselectivity of the ring closure via Gauge-Independent Atomic Orbital (GIAO) 1H NMR calculations. The WP04 method was used as the DFT code to yield accurate chemical shift values. Theoretical results correlated well with the expected regioisomer and aided assignment of the final structure.
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Affiliation(s)
- Sarinasadat Mozafari
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, 91775-1436 Mashhad, Iran
| | - Ali Shiri
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, 91775-1436 Mashhad, Iran
| | - Mehdi Bakavoli
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, 91775-1436 Mashhad, Iran
| | - Marzieh Akbarzadeh
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, 91775-1436 Mashhad, Iran
| | - Kayvan Saadat
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, 91775-1436 Mashhad, Iran
| | - Yasaman Etemadi
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, 91775-1436 Mashhad, Iran
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Eleftheriadis N, Thee SA, Zwinderman MRH, Leus NGJ, Dekker FJ. Activity-Based Probes for 15-Lipoxygenase-1. Angew Chem Int Ed Engl 2016; 55:12300-5. [PMID: 27612308 PMCID: PMC5218545 DOI: 10.1002/anie.201606876] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2016] [Indexed: 12/12/2022]
Abstract
Human 15-lipoxygenase-1 (15-LOX-1) plays an important role in several inflammatory lung diseases, such as asthma, COPD, and chronic bronchitis, as well as various CNS diseases, such as Alzheimer's disease, Parkinson's disease, and stroke. Activity-based probes of 15-LOX-1 are required to explore the role of this enzyme further and to enable drug discovery. In this study, we developed a 15-LOX-1 activity-based probe for the efficient activity-based labeling of recombinant 15-LOX-1. 15-LOX-1-dependent labeling in cell lysates and tissue samples was also possible. To mimic the natural substrate of the enzyme, we designed activity-based probes that covalently bind to the active enzyme and include a terminal alkene as a chemical reporter for the bioorthogonal linkage of a detectable functionality through an oxidative Heck reaction. The activity-based labeling of 15-LOX-1 should enable the investigation and identification of this enzyme in complex biological samples, thus opening up completely new opportunities for drug discovery.
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Affiliation(s)
- Nikolaos Eleftheriadis
- Department of Chemical and Pharmaceutical Biology, Groningen Research Institute of Pharmacy, University of Groningen, Antonius Deusinglaan 1, 9713 AV, Groningen, The Netherlands
| | - Stephanie A Thee
- Department of Chemical and Pharmaceutical Biology, Groningen Research Institute of Pharmacy, University of Groningen, Antonius Deusinglaan 1, 9713 AV, Groningen, The Netherlands
| | - Martijn R H Zwinderman
- Department of Chemical and Pharmaceutical Biology, Groningen Research Institute of Pharmacy, University of Groningen, Antonius Deusinglaan 1, 9713 AV, Groningen, The Netherlands
| | - Niek G J Leus
- Department of Chemical and Pharmaceutical Biology, Groningen Research Institute of Pharmacy, University of Groningen, Antonius Deusinglaan 1, 9713 AV, Groningen, The Netherlands
| | - Frank J Dekker
- Department of Chemical and Pharmaceutical Biology, Groningen Research Institute of Pharmacy, University of Groningen, Antonius Deusinglaan 1, 9713 AV, Groningen, The Netherlands.
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11
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Eleftheriadis N, Thee SA, Zwinderman MRH, Leus NGJ, Dekker FJ. Activity-Based Probes for 15-Lipoxygenase-1. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201606876] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Affiliation(s)
- Nikolaos Eleftheriadis
- Department of Chemical and Pharmaceutical Biology; Groningen Research Institute of Pharmacy; University of Groningen; Antonius Deusinglaan 1 9713 AV Groningen The Netherlands
| | - Stephanie A. Thee
- Department of Chemical and Pharmaceutical Biology; Groningen Research Institute of Pharmacy; University of Groningen; Antonius Deusinglaan 1 9713 AV Groningen The Netherlands
| | - Martijn R. H. Zwinderman
- Department of Chemical and Pharmaceutical Biology; Groningen Research Institute of Pharmacy; University of Groningen; Antonius Deusinglaan 1 9713 AV Groningen The Netherlands
| | - Niek G. J. Leus
- Department of Chemical and Pharmaceutical Biology; Groningen Research Institute of Pharmacy; University of Groningen; Antonius Deusinglaan 1 9713 AV Groningen The Netherlands
| | - Frank J. Dekker
- Department of Chemical and Pharmaceutical Biology; Groningen Research Institute of Pharmacy; University of Groningen; Antonius Deusinglaan 1 9713 AV Groningen The Netherlands
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12
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Akaberi T, Shiri A, Sheikhi-Mohammareh S. Synthesis of New Derivatives of Pyridazino[6,1-c]Pyrimido[5,4-e][1,2,4]Triazine; a Novel Heterocyclic System. JOURNAL OF CHEMICAL RESEARCH 2016. [DOI: 10.3184/174751916x14497690510968] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Several derivatives of the novel pyridazino[6,1-c]pyrimido[5,4-e][1,2,4]triazine ring system have been synthesised through heterocyclisation of 5-bromo-2,4-dichloro-6-methylpyrimidine with 3-chloro-6-hydrazinylpyridazine followed by treatment with secondary amines in boiling ethanol.
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Affiliation(s)
- Toktam Akaberi
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, 91775-1436 Mashhad, Iran
| | - Ali Shiri
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, 91775-1436 Mashhad, Iran
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13
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Ebrahimpour Z, Shiri A, Bakavoli M, Seyedi SM, Asghari T, Mague J. Synthesis of New Pyrimido[4,5-e][1,2,4]triazolo[3,4-b][1,3,4]thiadiazine Derivatives via S/N Smiles Rearrangement. J Heterocycl Chem 2015. [DOI: 10.1002/jhet.2572] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Zahra Ebrahimpour
- Department of Chemistry, Faculty of Science; Ferdowsi University of Mashhad; Mashhad 91775-1436 Iran
| | - Ali Shiri
- Department of Chemistry, Faculty of Science; Ferdowsi University of Mashhad; Mashhad 91775-1436 Iran
| | - Mehdi Bakavoli
- Department of Chemistry, Faculty of Science; Ferdowsi University of Mashhad; Mashhad 91775-1436 Iran
| | - Seyed Mohammad Seyedi
- Department of Chemistry, Faculty of Science; Ferdowsi University of Mashhad; Mashhad 91775-1436 Iran
| | - Tayebe Asghari
- Department of Chemistry, Faculty of Science; Ferdowsi University of Mashhad; Mashhad 91775-1436 Iran
| | - Joel Mague
- Department of Chemistry; Tulane University; New Orleans LA 70118 USA
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Karimian A, Eshghi H, Bakavoli M, Shiri A. Synthesis of New Derivatives of 4-(4,7,7-Trimethyl-7,8-dihydro-6H-benzo[b]pyrimido[5,4-e][1,4]thiazin-2-yl)morpholine. J Heterocycl Chem 2015. [DOI: 10.1002/jhet.2556] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Azam Karimian
- Department of Chemistry, Faculty of Science; Ferdowsi University of Mashhad; 91775-1436 Mashhad Iran
| | - Hossein Eshghi
- Department of Chemistry, Faculty of Science; Ferdowsi University of Mashhad; 91775-1436 Mashhad Iran
| | - Mehdi Bakavoli
- Department of Chemistry, Faculty of Science; Ferdowsi University of Mashhad; 91775-1436 Mashhad Iran
| | - Ali Shiri
- Department of Chemistry, Faculty of Science; Ferdowsi University of Mashhad; 91775-1436 Mashhad Iran
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Eleftheriadis N, Neochoritis CG, Leus NGJ, van der Wouden PE, Dömling A, Dekker FJ. Rational Development of a Potent 15-Lipoxygenase-1 Inhibitor with in Vitro and ex Vivo Anti-inflammatory Properties. J Med Chem 2015; 58:7850-62. [PMID: 26331552 DOI: 10.1021/acs.jmedchem.5b01121] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Human 15-lipoxygenase-1 (h-15-LOX-1) is a mammalian lipoxygenase and plays an important role in several inflammatory lung diseases such as asthma, COPD, and chronic bronchitis. Novel potent inhibitors of h-15-LOX-1 are required to explore the role of this enzyme further and to enable drug discovery efforts. In this study, we applied an approach in which we screened a fragment collection that is focused on a diverse substitution pattern of nitrogen-containing heterocycles such as indoles, quinolones, pyrazoles, and others. We denoted this approach substitution-oriented fragment screening (SOS) because it focuses on the identification of novel substitution patterns rather than on novel scaffolds. This approach enabled the identification of hits with good potency and clear structure-activity relationships (SAR) for h-1-5-LOX-1 inhibition. Molecular modeling enabled the rationalization of the observed SAR and supported structure-based design for further optimization to obtain inhibitor 14 d that binds with a Ki of 36 nM to the enzyme. In vitro and ex vivo biological evaluations of our best inhibitor demonstrate a significant increase of interleukin-10 (IL-10) gene expression, which indicates its anti-inflammatory properties.
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Affiliation(s)
- Nikolaos Eleftheriadis
- Department of Pharmaceutical Gene Modulation, ‡Department of Drug Design, Groningen Research Institute of Pharmacy, University of Groningen , Antonius Deusinglaan 1, 9713 AV Groningen, The Netherlands
| | - Constantinos G Neochoritis
- Department of Pharmaceutical Gene Modulation, ‡Department of Drug Design, Groningen Research Institute of Pharmacy, University of Groningen , Antonius Deusinglaan 1, 9713 AV Groningen, The Netherlands
| | - Niek G J Leus
- Department of Pharmaceutical Gene Modulation, ‡Department of Drug Design, Groningen Research Institute of Pharmacy, University of Groningen , Antonius Deusinglaan 1, 9713 AV Groningen, The Netherlands
| | - Petra E van der Wouden
- Department of Pharmaceutical Gene Modulation, ‡Department of Drug Design, Groningen Research Institute of Pharmacy, University of Groningen , Antonius Deusinglaan 1, 9713 AV Groningen, The Netherlands
| | - Alexander Dömling
- Department of Pharmaceutical Gene Modulation, ‡Department of Drug Design, Groningen Research Institute of Pharmacy, University of Groningen , Antonius Deusinglaan 1, 9713 AV Groningen, The Netherlands
| | - Frank J Dekker
- Department of Pharmaceutical Gene Modulation, ‡Department of Drug Design, Groningen Research Institute of Pharmacy, University of Groningen , Antonius Deusinglaan 1, 9713 AV Groningen, The Netherlands
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Dipyrimido[4,5-b:5,4-e][1,4]thiazine: synthesis and their enzyme inhibitory activity assessment on soybean 15-lipoxygenase. JOURNAL OF THE IRANIAN CHEMICAL SOCIETY 2015. [DOI: 10.1007/s13738-015-0620-1] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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