Effect of microbial activity on penetrometer resistance and elastic modulus of soil at different temperatures

The pore-rhizosheath shapes maize root architecture by enhancing root distribution in macropores

Pores and old root-channels are preferentially used by roots to allow them to penetrate hard soils. However, there are few studies that have accounted for the effects of pore-rhizosheath on root growth. In this study, we developed an approach by adding the synthetic root exudates using a porous stainless tube with 0.1-mm micropores through a peristaltic pump to reproduce the rhizosheath around the artificial pore, and investigated the effects of pores with and without rhizosheaths on maize root growth in a dense soil. The results indicated that the artificial rhizosheath was about 2.69 mm wide in the region surrounding the pores. The rhizosheath had a higher content of organic carbon, total nitrogen, and abundance of Actinobacteria than that of the bulk soil. Compared with the artificial macropores, the artificial root-pores with a rhizosheath increased the opportunities for root utilisation of the pores space, promoting steeper and deeper root growth. It is concluded that the pore-rhizosheath has a significant impact on root architecture by enhancing root distribution in macropores.

Effects of vegetation roots on the structure and hydraulic properties of soils: A perspective review

This paper aims to provide a state-of-the-art review on the effects of vegetation roots on the soil structure and soil hydraulic properties. After a thorough review of current studies, the effects of vegetation roots are summarized into four: root exudation, root penetration, root water uptake and root decay. Root exudates alter the size and stability of aggregates, the contact angle of soil, and the viscosity and surface tension of pore fluid; root exudates of crops always increase the soil water retention capacity and decrease the soil saturated hydraulic conductivity. Root penetration creates new pores or clogs existing pores during root growth, and root parameters (e.g., root biomass density, root diameter and root length density) are well correlated to soil hydraulic properties. Root water uptake can apparently increase the soil water retention capacity by providing an additional negative pressure and induce micro-fissures and macropores in the rhizosphere soil. Root decay modifies the pore structure and water repellency of soil, resulting in the increase of soil macro-porosity, soil water retention, and the saturated hydraulic conductivity or steady infiltration rate. Some of the above four effects may be difficult to be distinguished, and most importantly each is highly time-dependent and influenced by a multitude of plant-related and soil-related factors. Therefore, it remains a significant challenge to comprehend and quantify the effects of vegetation roots on the soil structure and soil hydraulic properties. Unsolved questions and disputes that require further investigations in the future are summarized in this review.

Physical properties of a sandy soil as affected by incubation with a synthetic root exudate: Strength, thermal and hydraulic conductivity, and evaporation

Plant roots release various organic materials that may modify soil structure and affect heat and mass transfer processes. The objective of this study was to determine the effects of a synthetic root exudate (SRE) on penetrometer resistance (PR), thermal conductivity (λ), hydraulic conductivity (k) and evaporation of water in a sandy soil. Soil samples, mixed with either distilled water or the SRE, were packed into columns at a designated bulk density and water content, and incubated for 7 days at 18°C. Soil PR, λ, k and evaporation rate were monitored during drying processes. Compared with those incubated with water, samples incubated with SRE had visible hyphae, greater PR (0.7-5.5 MPa in the water content range of 0.11 to 0.22 m3 m-3) and λ (0.2-0.7 W m-1 K-1 from 0.05 to 0.22 m3 m-3), and increased k in the wet region but decreased k in the dry region. SRE treatment also reduced the overall soil water evaporation rate and cumulative water loss. Analysis of X-ray computed tomography (CT) scanning showed that the SRE-treated samples had a greater proportion of small pores (<60 μm). These changes were attributed mainly to SRE-stimulated microbial activities.

HIGHLIGHTS

The effects of incubating a sandy soil with a synthetic root exudate (SRE) on soil physical properties and evaporation are examined.SRE incubation increased the fraction of small pores.SRE incubation increased soil penetrometer resistance and thermal conductivity.Soil hydraulic conductivity was increased in the wet region but was reduced in the dry region.SRE incubation reduced the overall evaporation rate and cumulative water loss.

Continuing Impacts of Selective Inhibition on Bacterial and Fungal Communities in an Agricultural Soil

Selective inhibition (SI) has been routinely used to differentiate the contributions of bacteria and fungi to soil ecological processes. SI experiments typically measured rapid responses within hours since the addition of inhibitor, but the long-term effects of selective biocides on microbial community composition and function were largely unknown. In this study, a microcosm experiment was performed with an agricultural soil to explore the effectiveness of two bactericides (bronopol, streptomycin) and two fungicides (cycloheximide, captan), which were applied at two different concentrations (2 and 10 mg g^-1). The microcosms were incubated for 6 weeks. A radiolabeled substrate, [1,2,3,4,4a,9a-¹⁴C] anthracene, was spiked to all microcosms, and the derived CO₂ was monitored during the incubation. The abundance and composition of bacteria and fungi were assessed by qPCR and Miseq sequencing of ribosomal rRNA genes. It was demonstrated that only 2 mg g^-1 bronopol and cycloheximide significantly changed the bacteria to fungi ratio without apparent non-target inhibition on the abundances; however, community shifts were observed in all treatments after 6 weeks incubation. The enrichment of specific taxa implicated a selection of resistant or adapted microbes by these biocides. Mineralization of anthracene was continuingly suppressed in all SI microcosms, which may result in biased estimate of bacterial and fungal contributions to pollutant degradation. These findings highlight the risks of long-term application of selective inhibition, and a preliminary assessment of biocide selection and concentration is highly recommended.

The effect of microbial activity on soil water diffusivity

In this study, we explored the effects of microbial activity on the evaporation of water from cores of a sandy soil under laboratory conditions. We applied treatments to stimulate microbial activity by adding different amounts of synthetic analogue root exudates. For comparison, we used soil samples without synthetic root exudates as control and samples treated with mercuric chloride to suppress microbial activity. Our results suggest that increasing microbial activity reduces the rate of evaporation from soil. Estimated diffusivities in soil with the largest amounts of added root exudates were one third of those estimated in samples where microbial activity was suppressed by adding mercuric chloride. We discuss the effect of our results with respect to water uptake by roots.

HIGHLIGHTS

We explored effects of microbial activity on the evaporation of water from cores of a sandy soil.We found the effect of microbial activity on water release characteristic was small.Increasing microbial activity reduced evaporation from soil, while microbial suppression increased it.Effect of microbial activity on root water uptake was estimated to be equivalent to a change in soil structure.