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Gatto JV, Travis J. Different patterns of coupled predator-prey dynamics when the same species interact in different locations. Oecologia 2024:10.1007/s00442-024-05594-z. [PMID: 38995364 DOI: 10.1007/s00442-024-05594-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2024] [Accepted: 07/01/2024] [Indexed: 07/13/2024]
Abstract
Individual predator and prey species exhibit coupled population dynamics in simple laboratory systems and simple natural communities. It is unclear how often such pairwise coupling occurs in more complex communities, in which an individual predator species might feed on several prey species and an individual prey species might be attacked by several predators. To examine this problem, we applied multivariate autoregressive state-space (MARSS) models to 5-year time-series of monthly surveys of a predatory fish, the eastern mosquitofish (Gambusia holbrooki), and its littoral zone prey species, the least killifish (Heterandria formosa), in three locations in north Florida. The MARSS models were consistent with coupled predator-prey dynamics at two of the three locations. In one of these two locations, the estimated densities of the two species displayed classic predator-prey oscillations. In the third location, there was a positive effect of killifish density on mosquitofish density but no detectable effect of mosquitofish density on killifish density. In all three locations, increased submergent vegetation cover was associated with increased prey density but not increased predator density. Eigenvalues analyses for the joint predator-prey dynamics indicated that one of the cyclic locations had more stable dynamics than the other locations. The three different patterns demonstrate that the dynamics of a pairwise predator-prey interaction emerge not only from the characteristics of the prey and the predator, but also those of the habitat and trophic web in which the predator and prey are embedded.
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Affiliation(s)
- John V Gatto
- Denver Federal Center, Technical Service Center, Bureau of Reclamation, Building 67, P.O. Box 25007, Denver, CO, 80225, USA
| | - Joseph Travis
- Department of Biological Science, Florida State University, Tallahassee, FL, 32306-4340, USA.
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Stamps JA, Biro PA. Time-specific convergence and divergence in individual differences in behavior: Theory, protocols and analyzes. Ecol Evol 2023; 13:e10615. [PMID: 38034332 PMCID: PMC10682899 DOI: 10.1002/ece3.10615] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2023] [Revised: 09/23/2023] [Accepted: 09/29/2023] [Indexed: 12/02/2023] Open
Abstract
Over the years, theoreticians and empiricists working in a wide range of disciplines, including physiology, ethology, psychology, and behavioral ecology, have suggested a variety of reasons why individual differences in behavior might change over time, such that different individuals become more similar (convergence) or less similar (divergence) to one another. Virtually none of these investigators have suggested that convergence or divergence will continue forever, instead proposing that these patterns will be restricted to particular periods over the course of a longer study. However, to date, few empiricists have documented time-specific convergence or divergence, in part because the experimental designs and statistical methods suitable for describing these patterns are not widely known. Here, we begin by reviewing an array of influential hypotheses that predict convergence or divergence in individual differences over timescales ranging from minutes to years, and that suggest how and why such patterns are likely to change over time (e.g., divergence followed by maintenance). Then, we describe experimental designs and statistical methods that can be used to determine if (and when) individual differences converged, diverged, or were maintained at the same level at specific periods during a longitudinal study. Finally, we describe why the concepts described herein help explain the discrepancy between what theoreticians and empiricists mean when they describe the "emergence" of individual differences or personality, how they might be used to study situations in which convergence and divergence patterns alternate over time, and how they might be used to study time-specific changes in other attributes of behavior, including individual differences in intraindividual variability (predictability), or genotypic differences in behavior.
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Affiliation(s)
- Judy A. Stamps
- Department of Evolution and EcologyUniversity of California, DavisDavisCaliforniaUSA
| | - Peter A. Biro
- School of Life and Environmental SciencesDeakin UniversityGeelongVictoriaAustralia
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Wice EW, Saltz JB. Indirect genetic effects for social network structure in Drosophila melanogaster. Philos Trans R Soc Lond B Biol Sci 2023; 378:20220075. [PMID: 36802774 PMCID: PMC9939268 DOI: 10.1098/rstb.2022.0075] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2022] [Accepted: 12/16/2022] [Indexed: 02/21/2023] Open
Abstract
The position an individual holds in a social network is dependent on both its direct and indirect social interactions. Because social network position is dependent on the actions and interactions of conspecifics, it is likely that the genotypic composition of individuals within a social group impacts individuals' network positions. However, we know very little about whether social network positions have a genetic basis, and even less about how the genotypic makeup of a social group impacts network positions and structure. With ample evidence indicating that network positions influence various fitness metrics, studying how direct and indirect genetic effects shape network positions is crucial for furthering our understanding of how the social environment can respond to selection and evolve. Using replicate genotypes of Drosophila melanogaster fruit flies, we created social groups that varied in their genotypic makeup. Social groups were videoed, and networks were generated using motion-tracking software. We found that both an individual's own genotype and the genotypes of conspecifics in its social group affect its position within a social network. These findings provide an early example of how indirect genetic effects and social network theory can be linked, and shed new light on how quantitative genetic variation shapes the structure of social groups. This article is part of a discussion meeting issue 'Collective behaviour through time'.
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Affiliation(s)
- Eric Wesley Wice
- Department of Biosciences, Rice University, Houston, TX 77005, USA
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Zerulla TC, Stoddard PK. The Biology of Polymorphic Melanic Side-Spotting Patterns in Poeciliid Fishes. Front Ecol Evol 2021. [DOI: 10.3389/fevo.2020.608289] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Melanin-based color patterns are an emerging model for studying molecular and evolutionary mechanisms driving phenotypic correlations. Extensive literature exists on color patterns and their correlated traits in the family Poeciliidae, indicating that these fishes are tractable models. We review the biology of polymorphic melanic side-spotting patterns characterized by macromelanophores forming irregular spotted patterns across fishes’ flanks. These patterns are present in the generaGambusia, Limia, Phalloceros, Poecilia, andXiphophorus. Their presence is controlled by dominant genes on autosomes or sex chromosomes. Variation in expression is under polygenic control; however, these genes’ identities are still largely unknown. In someGambusia holbrookiandPoecilia latipinna, expression is dependent on low temperature exposure, but underlying molecular mechanisms are unknown. Spotted fish develop melanoma in rare cases and are a well-developed model for melanoma research. Little is known about other physiological correlates except that spottedG. holbrookimales exhibit higher basal cortisol levels than unspotted males and that metabolic rate does not differ between morphs in someXiphophorusspecies. Behavioral differences between morphs are widespread, but specific to population, species, and social context. SpottedG. holbrookimales appear to be more social and more dominant. Juvenile spottedG. holbrookihave lower behavioral flexibility, and spottedX. variatusexhibit greater stress resistance. Findings conflict on whether morphs differ in sexual behavior and in sexual selection by females. Melanic side-spotting patterns are uncommon (<30%) in populations, although extreme high-frequency populations exist. This low frequency is surprising for dominant genes, indicating that a variety of selective pressures influence both these patterns and their correlated traits. Little is known about reproductive life history traits. SpottedG. holbrookiare larger and have higher survival when uncommon, but underlying mechanisms remain unknown. Spotted morphs appear to have a strong selective advantage during predation. Predators prefer to attack and consume unspotted morphs; however, this preference disappears when spottedG. holbrookimales are common, indicating negative frequency-dependent selection. Spotted morphs are preferred socially under turbid conditions, but other environmental factors that shape phenotypic correlations and morph fitness have not been studied. Finally, we present questions for future studies on melanic side-spotting patterns.
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Abstract
Natural history is the careful observation of nature, wherever nature is. Ultimately, it is what ecological, evolutionary, and behavioral science are supposed to explain. It is difficult to use natural history alone to test hypotheses in these fields because of the complex paths between process and pattern. Few patterns are predicted by one and only one hypothesis, so experiments are almost always necessary. However, the robustness of experimental results depends on how well experimental conditions reflect the integration of natural history. Natural history also plays a vital role in how well we can apply Krogh's principle to our work. Krogh's principle is that scientists begin with an important hypothesis and find a system (organism, habitat, species interaction) with which to test it. However, natural history is essential for knowing whether the question applies to the system or whether we are forcing the question on the system. There is value in beginning one's research not by identifying an interesting question and searching for the right system but by identifying an interesting system in which to ask the right question. This approach carries the danger of parochialism, which can be avoided only by having a command of theory as well as natural history. A command of both areas allows nature to tell us which question to ask instead of demanding that nature answer the question we find most interesting.
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Culumber ZW, Engel N, Travis J, Hughes KA. Larger female brains do not reduce male sexual coercion. Anim Behav 2020. [DOI: 10.1016/j.anbehav.2019.11.018] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
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Saltz JB. Gene–Environment Correlation in Humans: Lessons from Psychology for Quantitative Genetics. J Hered 2019; 110:455-466. [DOI: 10.1093/jhered/esz027] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2018] [Accepted: 04/17/2019] [Indexed: 11/13/2022] Open
Abstract
Abstract
Evolutionary biologists have long been aware that the effects of genes can reach beyond the boundary of the individual, that is, the phenotypic effects of genes can alter the environment. Yet, we rarely apply a quantitative genetics approach to understand the causes and consequences of genetic variation in the ways that individuals choose and manipulate their environments, particularly in wild populations. Here, I aim to stimulate research in this area by reviewing empirical examples of such processes from the psychology literature. Indeed, psychology researchers have been actively investigating genetic variation in the environments that individuals experience—a phenomenon termed “gene–environment correlation” (rGE)—since the 1970s. rGE emerges from genetic variation in individuals’ behavior and personality traits, which in turn affects the environments that they experience. I highlight concepts and examples from this literature, emphasizing the relevance to quantitative geneticists working on wild, nonhuman organisms. I point out fruitful areas of crossover between these disciplines, including how quantitative geneticists can test ideas about rGE in wild populations.
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Matthews G, Goulet CT, Delhey K, Atkins ZS, While GM, Gardner MG, Chapple DG. Avian predation intensity as a driver of clinal variation in colour morph frequency. J Anim Ecol 2018; 87:1667-1684. [PMID: 30098209 DOI: 10.1111/1365-2656.12894] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2018] [Accepted: 07/28/2018] [Indexed: 12/23/2022]
Abstract
Phenotypic variation provides the framework for natural selection to work upon, enabling adaptive evolution. One of the most discernible manifestations of phenotypic variability is colour variation. When this variation is discrete, genetically based colour pattern morphs occur simultaneously within a population. Why and how colour polymorphisms are maintained is an evolutionary puzzle. Several evolutionary drivers have been hypothesized as influencing clinal patterns of morph frequency, with spatial variation in climate and predation being considered especially important. Despite this, no study has examined both of their roles simultaneously. The aims of this study were to: (a) examine the covariation of physiology, environmental variables and colouration at a local scale; and (b) determine if these factors and their interplay explain broad clinal variation in morph frequency. We used the lizard Liopholis whitii as a model system, as this species displays a discrete, heritable polymorphism for colour pattern (plain-backed, patterned morphs) whose morph frequency varies latitudinally. We measured reflectance, field activity temperatures and microhabitat structure to test for differences in crypsis, thermal biology and microhabitat selection of patterned and plain-backed morphs within a single population where colour morphs occur sympatrically. We then used data from the literature to perform a broad-scale analysis to identify whether these factors also explained the latitudinal variation of morph frequency in this species. At the local scale, plain-backed morphs were found to be less cryptic than patterned morphs while no other differences were detected in terms of thermal biology, dorsal reflectance and microhabitat use. At a broader scale, predation was the most influential factor mediating morph frequency across latitudes. However, the observed pattern of morph frequency is opposite to what the modelling results suggest in that the incidence of the least cryptic morph is highest where predation pressure is most severe. Clinal variation in the level of background matching between morphs or the potential reproductive advantage by the plain-backed morph may, instead, be driving the observed morph frequency. Together, these results provide key insights into the evolution of local adaptation as well as the ecological forces involved in driving the dynamics of colour polymorphism.
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Affiliation(s)
- Genevieve Matthews
- School of Biological Sciences, Monash University, Clayton, Victoria, Australia
| | - Celine T Goulet
- School of Biological Sciences, Monash University, Clayton, Victoria, Australia
| | - Kaspar Delhey
- School of Biological Sciences, Monash University, Clayton, Victoria, Australia
| | - Zak S Atkins
- Department of Ecology, Environment and Evolution, La Trobe University, Melbourne, Victoria, Australia
| | - Geoffrey M While
- School of Biological Sciences, University of Tasmania, Hobart, Tasmania, Australia
| | - Michael G Gardner
- School of Biological Sciences, Flinders University of South Australia, Adelaide, South Australia, Australia.,The Evolutionary Biology Unit, South Australian Museum, Adelaide, South Australia, Australia
| | - David G Chapple
- School of Biological Sciences, Monash University, Clayton, Victoria, Australia
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Culumber ZW, Kraft B, Lemakos V, Hoffner E, Travis J, Hughes KA. GxG epistasis in growth and condition and the maintenance of genetic polymorphism in
Gambusia holbrooki. Evolution 2018; 72:1146-1154. [DOI: 10.1111/evo.13474] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2017] [Revised: 02/28/2018] [Accepted: 02/28/2018] [Indexed: 11/29/2022]
Affiliation(s)
- Zachary W. Culumber
- Department of Biological Science Florida State University 319 Stadium Drive Tallahassee FL 32306
| | - Brittany Kraft
- Department of Biological Science Florida State University 319 Stadium Drive Tallahassee FL 32306
| | - Valerie Lemakos
- Department of Biological Science Florida State University 319 Stadium Drive Tallahassee FL 32306
| | - Erika Hoffner
- Department of Biological Science Florida State University 319 Stadium Drive Tallahassee FL 32306
| | - Joseph Travis
- Department of Biological Science Florida State University 319 Stadium Drive Tallahassee FL 32306
| | - Kimberly A. Hughes
- Department of Biological Science Florida State University 319 Stadium Drive Tallahassee FL 32306
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Kraft B, Lemakos VA, Travis J, Hughes KA. Pervasive indirect genetic effects on behavioral development in polymorphic eastern mosquitofish. Behav Ecol 2017. [DOI: 10.1093/beheco/arx180] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Brittany Kraft
- Department of Biological Science, Florida State University, Tallahassee, FL, USA
| | - Valerie A Lemakos
- Department of Biological Science, Florida State University, Tallahassee, FL, USA
| | - Joseph Travis
- Department of Biological Science, Florida State University, Tallahassee, FL, USA
| | - Kimberly A Hughes
- Department of Biological Science, Florida State University, Tallahassee, FL, USA
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Bailey NW, Marie-Orleach L, Moore AJ. Indirect genetic effects in behavioral ecology: does behavior play a special role in evolution? Behav Ecol 2017. [DOI: 10.1093/beheco/arx127] [Citation(s) in RCA: 64] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
Affiliation(s)
- Nathan W Bailey
- School of Biology, University of St Andrews, St Andrews, Fife, UK
| | | | - Allen J Moore
- Department of Genetics, University of Georgia, Athens, GA USA
- Department of Entomology, University of Georgia, Athens, GA USA
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