Effects of elevated ozone concentration on CH4 and N2O emission from paddy soil under fully open-air field conditions

Similar photosynthetic but different yield responses of C3 and C4 crops to elevated O3

The deleterious effects of ozone (O3) pollution on crop physiology, yield, and productivity are widely acknowledged. It has also been assumed that C4 crops with a carbon concentrating mechanism and greater water use efficiency are less sensitive to O3 pollution than C3 crops. This assumption has not been widely tested. Therefore, we compiled 46 journal articles and unpublished datasets that reported leaf photosynthetic and biochemical traits, plant biomass, and yield in five C3 crops (chickpea, rice, snap bean, soybean, and wheat) and four C4 crops (sorghum, maize, Miscanthus × giganteus, and switchgrass) grown under ambient and elevated O3 concentration ([O3]) in the field at free-air O3 concentration enrichment (O3-FACE) facilities over the past 20 y. When normalized by O3 exposure, C3 and C4 crops showed a similar response of leaf photosynthesis, but the reduction in chlorophyll content, fluorescence, and yield was greater in C3 crops compared with C4 crops. Additionally, inbred and hybrid lines of rice and maize showed different sensitivities to O3 exposure. This study quantitatively demonstrates that C4 crops respond less to elevated [O3] than C3 crops. This understanding could help maintain cropland productivity in an increasingly polluted atmosphere.

Elevated ozone decreases the multifunctionality of belowground ecosystems

Elevated tropospheric ozone (O₃ ) affects the allocation of biomass aboveground and belowground and influences terrestrial ecosystem functions. However, how belowground functions respond to elevated O₃ concentrations ([O₃ ]) remains unclear at the global scale. Here, we conducted a detailed synthesis of belowground functioning responses to elevated [O₃ ] by performing a meta-analysis of 2395 paired observations from 222 publications. We found that elevated [O₃ ] significantly reduced the primary productivity of roots by 19.8%, 16.3%, and 26.9% for crops, trees and grasses, respectively. Elevated [O₃ ] strongly decreased the root/shoot ratio by 11.3% for crops and by 4.9% for trees, which indicated that roots were highly sensitive to O₃ . Elevated [O₃ ] impacted carbon and nitrogen cycling in croplands, as evidenced by decreased dissolved organic carbon, microbial biomass carbon, total soil nitrogen, ammonium nitrogen, microbial biomass nitrogen, and nitrification rates in association with increased nitrate nitrogen and denitrification rates. Elevated [O₃ ] significantly decreased fungal phospholipid fatty acids in croplands, which suggested that O₃ altered the microbial community and composition. The responses of belowground functions to elevated [O₃ ] were modified by experimental methods, root environments, and additional global change factors. Therefore, these factors should be considered to avoid the underestimation or overestimation of the impacts of elevated [O₃ ] on belowground functioning. The significant negative relationships between O₃ -treated intensity and the multifunctionality index for croplands, forests, and grasslands implied that elevated [O₃ ] decreases belowground ecosystem multifunctionality.

Elevated O3 concentrations alter the compartment-specific microbial communities inhabiting rust-infected poplars

Elevated ozone (O₃ ) can affect the susceptivity of plants to rust pathogens. However, the collective role of microbiomes involved in such interaction remains largely elusive. We exposed two cultivated poplar clones exhibiting differential O₃ sensitivities, to non-filtered ambient air (NF), NF + 40 ppb or NF + 60 ppb O₃ -enriched air in field open-top chambers and then inoculated Melampsora larici-populina urediniospores to study their response to rust infection and to investigate how microbiomes inhabiting four compartments (phyllosphere, rhizosphere, root endosphere, bulk soil) are involved in this response. We found that hosts with higher O₃ sensitivity had significantly lower rust severity than hosts with lower sensitivity. Furthermore, the effect of increased O₃ on the diversity and composition of microbial communities was highly dependent on poplar compartments, with the microbial network complexity patterns being completely opposite between the two clones. Notably, microbial source analysis estimated that phyllosphere fungal communities predominately derived from root endosphere and vice versa, suggesting a potential transmission mechanism between plant above- and below-ground systems. These promising results suggest that further investigations are needed to better understand the interactions of abiotic and biotic stresses on plant performance and the role of the microbiome in driving these changes.

Ethylenediurea (EDU) protects inbred but not hybrid cultivars of rice from yield losses due to surface ozone

The rising concentration of ground-level ozone (O₃) reduces crop yield via increased oxidative stress. Application of ethylenediurea (EDU) protects plants from O₃ and could thereby serve as a means to estimate the crop yield losses due to ambient O₃ (AO₃). However, no study but a few exceptions has ever compared the yield loss estimates from EDU application with those from O₃ elevation experiments. Here, we estimated yield loss to AO₃ in rice cultivars across the 3 types, indica, japonica, and hybrid, by an EDU application in the field, and compared the yield losses with those estimated with dose-response relationships based on O₃ elevation experiments. Relative yield loss (RYL) in the EDU application was estimated at 16% across the rice types on an assumption of a 100% efficiency for protection of crop yield by EDU. This estimate of RYL was close to the 15% RYL estimated from the O₃ elevation experiments when a common sensitivity to O₃ is assumed across the cultivars. The rice yield loss due to AO₃ was thus consistent between the two approaches supporting the idea of EDU application for the yield loss estimation. When only hybrids are focused, however, the RYL from EDU application (16%) was much lower than the 34% RYL from the O₃ elevation experiments, which indicates only a 37% yield protection by EDU in the hybrid rice. The incomplete protection by EDU and its genetic variability indicates the need to quantify the efficiency of protection from AO₃-induced yield loss as estimated with O₃ manipulating experiments.

Interactive effects of ozone exposure and nitrogen addition on the rhizosphere bacterial community of poplar saplings

It is widely documented that elevated ground-level ozone (O₃) has negative effects on tree physiological characteristics, and in return, affects forest ecosystem function. However, the effect may be modified by soil nitrogen (N) availability. Numerous studies have focused on the aboveground part of trees under elevated O₃ alone or in combination with soil N; however, little is known about the response of soil bacterial communities. Here, we investigated the effects of O₃ (charcoal-filtered air, CF, versus ambient air +40 ppb of O₃, E-O₃), N addition (0 kg ha^-1 yr^-1, N0, versus 200 kg ha^-1 yr^-1, N200), and their combination on rhizosphere soil bacterial communities of hybrid poplar, using an MiSeq targeted amplicon sequencing of the bacterial 16S rRNA gene. E-O₃ significantly decreased bacterial abundance, and N200 significantly decreased the α-diversity. The negative impacts of N200 on α-diversity were alleviated by E-O₃. Nitrogen and E-O₃-N200 combination altered bacterial community composition, with a significant increase in the relative abundance of Proteobacteria and Bacteroidetes and a decrease in the abundance of Firmicutes. From an ecological network analysis, E-O₃, alone and in combination with N200, complicated the co-occurrence network of bacterial communities by inducing a microbial survival strategy, shifting the hub species from RB41 to Bacillus and Blastococcus. Conversely, N200 led to simplification and decentralization of the co-occurrence network. These findings demonstrate that the rhizosphere bacterial communities exhibit divergent responses to E-O₃ and N200, suggesting the need to consider the stability of the belowground ecosystem to optimize plantation management in response to environmental changes.

Impact of ozone pollution on nitrogen fertilization management during maize (Zea mays L.) production

The impacts of ozone (O₃) on crops have been extensively studied and are well understood. However, little information is available on the response of crops (especially maize) to the interactive effects of O₃ and nitrogen (N) fertilizer. To this end, a maize cultivar (Zheng dan 958, ZD958) that is common in China was exposed to two O₃ treatments and four N levels. We found that (1) the interactions between O₃ and N were non-significant for grain yield, plant biomass, C and N, although N addition significantly increased all parameters except C concentrations in grain and plant; (2) compared to NF (non-filtered ambient air O₃ concentration), NF60 (NF plus an extra 60 ppb O₃) increased the optimum N application rates (N_opt) in grain yield and plant biomass, but not grain yield and plant biomass potentials, thus resulting in lower N use efficiencies (NUE) and a larger risk of N-related environmental pollution (e.g., increased N₂O emission) under N_opt in NF60; (3) because of higher optimum plant N uptake (PN_opt) in NF60, relative to NF, plant N-saturated conditions for grain yield potential can be gradually turned into N-limited conditions as O₃ pollution increases. These findings manifest that O₃ is a vital global change factor impacting the management of N fertilization. If current O₃ pollution is substantially reduced, maize yield and biomass potentials can be increased under reductions in N input and N-related environmental pollution. In addition, these results can also contribute in developing and verifying N_opt model considering O₃ pollution in the future.

Ozone affects plant, insect, and soil microbial communities: A threat to terrestrial ecosystems and biodiversity

Elevated tropospheric ozone concentrations induce adverse effects in plants. We reviewed how ozone affects (i) the composition and diversity of plant communities by affecting key physiological traits; (ii) foliar chemistry and the emission of volatiles, thereby affecting plant-plant competition, plant-insect interactions, and the composition of insect communities; and (iii) plant-soil-microbe interactions and the composition of soil communities by disrupting plant litterfall and altering root exudation, soil enzymatic activities, decomposition, and nutrient cycling. The community composition of soil microbes is consequently changed, and alpha diversity is often reduced. The effects depend on the environment and vary across space and time. We suggest that Atlantic islands in the Northern Hemisphere, the Mediterranean Basin, equatorial Africa, Ethiopia, the Indian coastline, the Himalayan region, southern Asia, and Japan have high endemic richness at high ozone risk by 2100.

Effects of elevated ground-level ozone on paddy soil bacterial community and assembly mechanisms across four years

It is well known that elevated ground-level ozone (eO₃) poses a threat to the ecosystem. Little knowledge about the underground variables, especially on soil microorganisms, however, has been revealed. Such knowledge will tremendously help to advance our understanding of the correlation between ecosystems and climate change, as well as our ability to predict future trajectory. For this purpose, we have collected soil DNA samples (eO₃ vs. Ambient, each having 36 samples) over four years. Our results have verified the temporal responses and the underlying assembly mechanisms of the paddy bacterial community to eO₃. Contrary to the widespread consensus, it was found that eO₃ stimulated bacterial alpha diversities. The higher complexity and the centralization of the co-occurrence network of the bacterial community suggested that this stimulation was due to a microbial survival strategy in response to the limited resources, which led to the instability of the community. Furthermore, the observed slower temporal turnover of the bacterial community composition in response to eO₃ was due to the decreased deterministic processes derived from plants, which implied that eO₃ disrupted the coordination between soil microorganisms and rice crop. All above phenomena provided novel insights into the adverse influences of eO₃ on the soil microbial community. If O₃ concentration increases continuously, the adverse effects will be aggravated and harm the related ecological functions.

Limited potential of harvest index improvement to reduce methane emissions from rice paddies

Rice is a staple food for nearly half of the world's population, but rice paddies constitute a major source of anthropogenic CH₄ emissions. Root exudates from growing rice plants are an important substrate for methane-producing microorganisms. Therefore, breeding efforts optimizing rice plant photosynthate allocation to grains, i.e., increasing harvest index (HI), are widely expected to reduce CH₄ emissions with higher yield. Here we show, by combining a series of experiments, meta-analyses and an expert survey, that the potential of CH₄ mitigation from rice paddies through HI improvement is in fact small. Whereas HI improvement reduced CH₄ emissions under continuously flooded (CF) irrigation, it did not affect CH₄ emissions in systems with intermittent irrigation (II). We estimate that future plant breeding efforts aimed at HI improvement to the theoretical maximum value will reduce CH₄ emissions in CF systems by 4.4%. However, CF systems currently make up only a small fraction of the total rice growing area (i.e., 27% of the Chinese rice paddy area). Thus, to achieve substantial CH₄ mitigation from rice agriculture, alternative plant breeding strategies may be needed, along with alternative management.

Contrasting Warming and Ozone Effects on Denitrifiers Dominate Soil N2O Emissions

Nitrous oxide (N₂O) in the atmosphere is a major greenhouse gas and reacts with volatile organic compounds to create ozone (an air pollutant) in the troposphere. Climate change factors such as warming and elevated ozone (eO₃) affect N₂O fluxes, but the direction and magnitude of these effects are uncertain and the underlying mechanisms remain unclear. We examined the impact of simulated warming (control + 3.6 °C) and eO₃ (control + 45 ppb) on soil N₂O fluxes in a soybean agroecosystem. Results obtained showed that warming significantly increased soil labile C, microbial biomass, and soil N mineralization, but eO₃ reduced these parameters. Warming enhanced N₂O-producing denitrifers ( nirS- and nirK-type), corresponding to increases in both the rate and sum of N₂O emissions. In contrast, eO₃ significantly reduced both N₂O-producing and N₂O-consuming ( nosZ-type) denitrifiers but had no impact on N₂O emissions. Further, eO₃ offsets the effects of warming on soil labile C, microbial biomass, and the population size of denitrifiers but still increased N₂O emissions, indicating a direct effect of temperature on N₂O emissions. Together, these findings suggest that warming may promote N₂O production through increasing both the abundance and activities of N₂O-producing microbes, positively feeding back to the ongoing climate change.

Higher yields and lower methane emissions with new rice cultivars

Breeding high-yielding rice cultivars through increasing biomass is a key strategy to meet rising global food demands. Yet, increasing rice growth can stimulate methane (CH₄ ) emissions, exacerbating global climate change, as rice cultivation is a major source of this powerful greenhouse gas. Here, we show in a series of experiments that high-yielding rice cultivars actually reduce CH₄ emissions from typical paddy soils. Averaged across 33 rice cultivars, a biomass increase of 10% resulted in a 10.3% decrease in CH₄ emissions in a soil with a high carbon (C) content. Compared to a low-yielding cultivar, a high-yielding cultivar significantly increased root porosity and the abundance of methane-consuming microorganisms, suggesting that the larger and more porous root systems of high-yielding cultivars facilitated CH₄ oxidation by promoting O₂ transport to soils. Our results were further supported by a meta-analysis, showing that high-yielding rice cultivars strongly decrease CH₄ emissions from paddy soils with high organic C contents. Based on our results, increasing rice biomass by 10% could reduce annual CH₄ emissions from Chinese rice agriculture by 7.1%. Our findings suggest that modern rice breeding strategies for high-yielding cultivars can substantially mitigate paddy CH₄ emission in China and other rice growing regions.

How does elevated ozone reduce methane emissions from peatlands?

The effects of increased tropospheric ozone (O₃) pollution levels on methane (CH₄) emissions from peatlands, and their underlying mechanisms, remain unclear. In this study, we exposed peatland mesocosms from a temperate wet heath dominated by the sedge Schoenus nigricans and Sphagnum papillosum to four O₃ treatments in open-top chambers for 2.5years, to investigate the O₃ impacts on CH₄ emissions and the processes that underpin these responses. Summer CH₄ emissions, were significantly reduced, by 27% over the experiment, due to summer daytime (8hday^-1) O₃ exposure to non-filtered air (NFA) plus 35ppb O₃, but were not significantly affected by year-round, 24hday^-1, exposure to NFA plus 10ppb or NFA plus 25ppb O₃. There was no evidence that the reduced CH₄ emissions in response to elevated summer O₃ exposure were caused by reduced plant-derived carbon availability below-ground, because we found no significant effect of high summer O₃ exposure on root biomass, pore water dissolved organic carbon concentrations or the contribution of recent photosynthate to CH₄ emissions. Our CH₄ production potential and CH₄ oxidation potential measurements in the different O₃ treatments could also not explain the observed CH₄ emission responses to O₃. However, pore water ammonium concentrations at 20cm depth were consistently reduced during the experiment by elevated summer O₃ exposure, and strong positive correlations were observed between CH₄ emission and pore water ammonium concentration at three peat depths over the 2.5-year study. Our results therefore imply that elevated regional O₃ exposures in summer, but not the small increases in northern hemisphere annual mean background O₃ concentrations predicted over this century, may lead to reduced CH₄ emissions from temperate peatlands as a consequence of reductions in soil inorganic nitrogen affecting methanogenic and/or methanotrophic activity.

Current and future ozone risks to global terrestrial biodiversity and ecosystem processes

Risks associated with exposure of individual plant species to ozone (O3) are well documented, but implications for terrestrial biodiversity and ecosystem processes have received insufficient attention. This is an important gap because feedbacks to the atmosphere may change as future O3 levels increase or decrease, depending on air quality and climate policies. Global simulation of O3 using the Community Earth System Model (CESM) revealed that in 2000, about 40% of the Global 200 terrestrial ecoregions (ER) were exposed to O3 above thresholds for ecological risks, with highest exposures in North America and Southern Europe, where there is field evidence of adverse effects of O3, and in central Asia. Experimental studies show that O3 can adversely affect the growth and flowering of plants and alter species composition and richness, although some communities can be resilient. Additional effects include changes in water flux regulation, pollination efficiency, and plant pathogen development. Recent research is unraveling a range of effects belowground, including changes in soil invertebrates, plant litter quantity and quality, decomposition, and nutrient cycling and carbon pools. Changes are likely slow and may take decades to become detectable. CESM simulations for 2050 show that O3 exposure under emission scenario RCP8.5 increases in all major biomes and that policies represented in scenario RCP4.5 do not lead to a general reduction in O3 risks; rather, 50% of ERs still show an increase in exposure. Although a conceptual model is lacking to extrapolate documented effects to ERs with limited or no local information, and there is uncertainty about interactions with nitrogen input and climate change, the analysis suggests that in many ERs, O3 risks will persist for biodiversity at different trophic levels, and for a range of ecosystem processes and feedbacks, which deserves more attention when assessing ecological implications of future atmospheric pollution and climate change.

Divergent responses of methanogenic archaeal communities in two rice cultivars to elevated ground-level O3

Inhibitive effect of elevated ground-level ozone (O3) on paddy methane (CH4) emission varies with rice cultivars. However, little information is available on its microbial mechanism. For this purpose, the responses of methane-metabolizing microorganisms, methanogenic archaea and methanotrophic bacteria to O3 pollution were investigated in the O3-tolerant (YD6) and the O3-sensitive (IIY084) cultivars at two rice growth stages in Free Air Concentration Elevation of O3 (O3-FACE) system of China. It was found that O3 pollution didn't change the abundances of Type I and Type II methanotrophic bacteria at two rice stages. For methanogenic archaea, their abundances in both cultivars were decreased by O3 pollution at the tillering stage. Furthermore, a greater negative influence on methanogenic archaeal community was observed on IIY084 than on YD6: at tillering stage, the alpha diversity indices of methanogenic archaeal community in IIY084 was decreased to a greater extent than in YD6; IIY084 shifted methanogenic archaeal community composition and decreased the abundances and the diversities of Methanosarcinaceae and Methanosaetaceae as well as the abundance of Methanomicrobiales, while the diversity of Methanocellaceae were increased in YD6. These findings indicate that the variations in the responses of paddy CH4 emission to O3 pollution between cultivars could result from the divergent responses of their methanogenic archaea.