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Saleh Ziabari O, Zhong Q, Purandare SR, Reiter J, Zera AJ, Brisson JA. Pea aphid winged and wingless males exhibit reproductive, gene expression, and lipid metabolism differences. CURRENT RESEARCH IN INSECT SCIENCE 2022; 2:100039. [PMID: 36003264 PMCID: PMC9387497 DOI: 10.1016/j.cris.2022.100039] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/09/2021] [Revised: 05/16/2022] [Accepted: 05/17/2022] [Indexed: 11/18/2022]
Abstract
Alternative, intraspecific phenotypes offer an opportunity to identify the mechanistic basis of differences associated with distinctive life history strategies. Wing dimorphic insects, in which both flight-capable and flight-incapable individuals occur in the same population, are particularly well-studied in terms of why and how the morphs trade off flight for reproduction. Yet despite a wealth of studies examining the differences between female morphs, little is known about male differences, which could arise from different causes than those acting on females. Here we examined reproductive, gene expression, and biochemical differences between pea aphid (Acyrthosiphon pisum) winged and wingless males. We find that winged males are competitively superior in one-on-one mating circumstances, but wingless males reach reproductive maturity faster and have larger testes. We suggest that males tradeoff increased local matings with concurrent possible inbreeding for outbreeding and increased ability to find mates. At the mechanistic level, differential gene expression between the morphs revealed a possible role for activin and insulin signaling in morph differences; it also highlighted genes not previously identified as being functionally important in wing polymorphism, such as genes likely involved in sperm production. Further, we find that winged males have higher lipid levels, consistent with their use as flight fuel, but we find no consistent patterns of different levels of activity among five enzymes associated with lipid biosynthesis. Overall, our analyses provide evidence that winged versus wingless males exhibit differences at the reproductive, gene expression, and biochemical levels, expanding the field's understanding of the functional aspects of morph differences.
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Affiliation(s)
- Omid Saleh Ziabari
- Department of Biology, University of Rochester, Rochester, NY 14610, USA
| | - Qingyi Zhong
- Department of Biology, University of Rochester, Rochester, NY 14610, USA
| | - Swapna R. Purandare
- Current address: Department of Computational Biology, Indraprastha Institute of Information Technology Delhi; New Delhi, India
| | - Joel Reiter
- Department of Biology, University of Rochester, Rochester, NY 14610, USA
| | - Anthony J. Zera
- School of Biological Sciences, University of Nebraska-Lincoln
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Wang D, Liu B. Transcriptomic analysis reveals the immune changes associated with reproduction in the clam Meretrix petechialis. FISH & SHELLFISH IMMUNOLOGY 2021; 108:24-31. [PMID: 33253907 DOI: 10.1016/j.fsi.2020.11.026] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2020] [Revised: 11/23/2020] [Accepted: 11/24/2020] [Indexed: 06/12/2023]
Abstract
Substantial mortality and economic losses in marine mollusk culture has drawn considerable attention in recent years. The changes in immune status and environmental stress are thought to be the main causes of shellfish summer mortality. The reproduction and immune defense are both physiologically demanding processes, therefore, the immune status of mollusk is likely to be affected by reproduction during breeding. In present study, we performed transcriptome and gene expression analyses in the clam Meretrix petechialis pre-/post-spawning. DEGs enrichment analysis revealed important immune signaling pathways and key genes changed after spawning. Further analysis showed females up-regulated genes involved in apoptosis, TLR signal pathway and heat shock, whereas males down-regulated complement-related genes after spawning. Additionally, both genders of clams up-regulated its immune response level to against Vibrio infection after spawning revealed by the changes of four immune-related DEGs. The up-regulation of two marker genes at the transcription and protein levels further confirmed that pathogen reinforced the expression differences of immune-related genes between the two groups. Our study provides a new insight into the understanding of molecular mechanisms underlying reproduction influenced immune differences in M. petechialis.
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Affiliation(s)
- Di Wang
- CAS Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Center for Ocean Mega-Science, Chinese Academy of Sciences, Qingdao, 266071, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Baozhong Liu
- CAS Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Center for Ocean Mega-Science, Chinese Academy of Sciences, Qingdao, 266071, China; Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, 266000, China; University of Chinese Academy of Sciences, Beijing, 100049, China.
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Zera AJ, Vellichirammal NN, Brisson JA. Diurnal and developmental differences in gene expression between adult dispersing and flightless morphs of the wing polymorphic cricket, Gryllus firmus: Implications for life-history evolution. JOURNAL OF INSECT PHYSIOLOGY 2018; 107:233-243. [PMID: 29656101 DOI: 10.1016/j.jinsphys.2018.04.003] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2017] [Revised: 03/26/2018] [Accepted: 04/05/2018] [Indexed: 06/08/2023]
Abstract
The functional basis of life history adaptation is a key topic of research in life history evolution. Studies of wing-polymorphism in the cricket Gryllus firmus have played a prominent role in this field. However, prior in-depth investigations of morph specialization have primarily focused on a single hormone, juvenile hormone, and a single aspect of intermediary metabolism, the fatty-acid biosynthetic component of lipid metabolism. Moreover, the role of diurnal variation in life history adaptation in G. firmus has been understudied, as is the case for organisms in general. Here, we identify genes whose expression differs consistently between the morphs independent of time-of-day during early adulthood, as well as genes that exhibit a strong pattern of morph-specific diurnal expression. We find strong, consistent, morph-specific differences in the expression of genes involved in endocrine regulation, carbohydrate and lipid metabolism, and immunity - in particular, in the expression of an insulin-like-peptide precursor gene and genes involved in triglyceride production. We also find that the flight-capable morph exhibited a substantially greater number of genes exhibiting diurnal change in gene expression compared with the flightless morph, correlated with the greater circadian change in the hemolymph juvenile titer in the dispersing morph. In fact, diurnal differences in expression within the dispersing morph at different times of the day were significantly greater in magnitude than differences between dispersing and flightless morphs at the same time-of-day. These results provide important baseline information regarding the potential role of variable gene expression on life history specialization in morphs of G. firmus, and the first information on genetically-variable, diurnal change in gene expression, associated with a key life history polymorphism. These results also suggest the existence of prominent morph-specific circadian differences in gene expression in G. firmus, possibly caused by the morph-specific circadian rhythm in the juvenile hormone titer.
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Affiliation(s)
- Anthony J Zera
- School of Biological Sciences, University of Nebraska-Lincoln, NE 68588, United States.
| | | | - Jennifer A Brisson
- Department of Biology, University of Rochester, Rochester, NY 14627, United States
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4
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Saastamoinen M, Bocedi G, Cote J, Legrand D, Guillaume F, Wheat CW, Fronhofer EA, Garcia C, Henry R, Husby A, Baguette M, Bonte D, Coulon A, Kokko H, Matthysen E, Niitepõld K, Nonaka E, Stevens VM, Travis JMJ, Donohue K, Bullock JM, Del Mar Delgado M. Genetics of dispersal. Biol Rev Camb Philos Soc 2017; 93:574-599. [PMID: 28776950 PMCID: PMC5811798 DOI: 10.1111/brv.12356] [Citation(s) in RCA: 123] [Impact Index Per Article: 17.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2017] [Revised: 07/03/2017] [Accepted: 07/05/2017] [Indexed: 12/12/2022]
Abstract
Dispersal is a process of central importance for the ecological and evolutionary dynamics of populations and communities, because of its diverse consequences for gene flow and demography. It is subject to evolutionary change, which begs the question, what is the genetic basis of this potentially complex trait? To address this question, we (i) review the empirical literature on the genetic basis of dispersal, (ii) explore how theoretical investigations of the evolution of dispersal have represented the genetics of dispersal, and (iii) discuss how the genetic basis of dispersal influences theoretical predictions of the evolution of dispersal and potential consequences. Dispersal has a detectable genetic basis in many organisms, from bacteria to plants and animals. Generally, there is evidence for significant genetic variation for dispersal or dispersal‐related phenotypes or evidence for the micro‐evolution of dispersal in natural populations. Dispersal is typically the outcome of several interacting traits, and this complexity is reflected in its genetic architecture: while some genes of moderate to large effect can influence certain aspects of dispersal, dispersal traits are typically polygenic. Correlations among dispersal traits as well as between dispersal traits and other traits under selection are common, and the genetic basis of dispersal can be highly environment‐dependent. By contrast, models have historically considered a highly simplified genetic architecture of dispersal. It is only recently that models have started to consider multiple loci influencing dispersal, as well as non‐additive effects such as dominance and epistasis, showing that the genetic basis of dispersal can influence evolutionary rates and outcomes, especially under non‐equilibrium conditions. For example, the number of loci controlling dispersal can influence projected rates of dispersal evolution during range shifts and corresponding demographic impacts. Incorporating more realism in the genetic architecture of dispersal is thus necessary to enable models to move beyond the purely theoretical towards making more useful predictions of evolutionary and ecological dynamics under current and future environmental conditions. To inform these advances, empirical studies need to answer outstanding questions concerning whether specific genes underlie dispersal variation, the genetic architecture of context‐dependent dispersal phenotypes and behaviours, and correlations among dispersal and other traits.
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Affiliation(s)
- Marjo Saastamoinen
- Department of Biosciences, Metapopulation Research Centre, University of Helsinki, P.O. Box 65, 00014 Helsinki, Finland
| | - Greta Bocedi
- School of Biological Sciences, University of Aberdeen, Aberdeen AB24 2TZ, U.K
| | - Julien Cote
- Laboratoire Évolution & Diversité Biologique UMR5174, CNRS, Université Toulouse III Paul Sabatier, 31062 Toulouse, France
| | - Delphine Legrand
- Centre National de la Recherche Scientifique and Université Paul Sabatier Toulouse III, SETE Station d'Ecologie Théorique et Expérimentale, UMR 5321, 09200 Moulis, France
| | - Frédéric Guillaume
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, CH-8057 Zurich, Switzerland
| | - Christopher W Wheat
- Population Genetics, Department of Zoology, Stockholm University, S-10691 Stockholm, Sweden
| | - Emanuel A Fronhofer
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, CH-8057 Zurich, Switzerland.,Department of Aquatic Ecology, Eawag, Swiss Federal Institute of Aquatic Science and Technology, CH-8600 Dubendorf, Switzerland
| | - Cristina Garcia
- CIBIO-InBIO, Universidade do Porto, 4485-661 Vairão, Portugal
| | - Roslyn Henry
- School of Biological Sciences, University of Aberdeen, Aberdeen AB24 2TZ, U.K.,School of GeoSciences, University of Edinburgh, Edinburgh EH89XP, U.K
| | - Arild Husby
- Department of Biosciences, Metapopulation Research Centre, University of Helsinki, P.O. Box 65, 00014 Helsinki, Finland
| | - Michel Baguette
- Centre National de la Recherche Scientifique and Université Paul Sabatier Toulouse III, SETE Station d'Ecologie Théorique et Expérimentale, UMR 5321, 09200 Moulis, France.,Museum National d'Histoire Naturelle, Institut Systématique, Evolution, Biodiversité, UMR 7205, F-75005 Paris, France
| | - Dries Bonte
- Department of Biology, Ghent University, B-9000 Ghent, Belgium
| | - Aurélie Coulon
- PSL Research University, CEFE UMR 5175, CNRS, Université de Montpellier, Université Paul-Valéry Montpellier, EPHE, Biogéographie et Ecologie des Vertébrés, 34293 Montpellier, France.,CESCO UMR 7204, Bases écologiques de la conservation, Muséum national d'Histoire naturelle, 75005 Paris, France
| | - Hanna Kokko
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, CH-8057 Zurich, Switzerland
| | - Erik Matthysen
- Evolutionary Ecology Group, Department of Biology, University of Antwerp, Universiteitsplein 1, 2610 Wilrijk, Belgium
| | - Kristjan Niitepõld
- Department of Biosciences, Metapopulation Research Centre, University of Helsinki, P.O. Box 65, 00014 Helsinki, Finland
| | - Etsuko Nonaka
- Department of Biosciences, Metapopulation Research Centre, University of Helsinki, P.O. Box 65, 00014 Helsinki, Finland
| | - Virginie M Stevens
- Centre National de la Recherche Scientifique and Université Paul Sabatier Toulouse III, SETE Station d'Ecologie Théorique et Expérimentale, UMR 5321, 09200 Moulis, France
| | - Justin M J Travis
- School of Biological Sciences, University of Aberdeen, Aberdeen AB24 2TZ, U.K
| | | | - James M Bullock
- NERC Centre for Ecology & Hydrology, Wallingford OX10 8BB, U.K
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5
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The role of lipid metabolism during parental care in two species of burying beetle (Nicrophorus spp.). Anim Behav 2017. [DOI: 10.1016/j.anbehav.2017.05.019] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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6
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Zera AJ, Clark R, Behmer S. Lipogenesis in a wing-polymorphic cricket: Canalization versus morph-specific plasticity as a function of nutritional heterogeneity. JOURNAL OF INSECT PHYSIOLOGY 2016; 95:118-132. [PMID: 27686035 DOI: 10.1016/j.jinsphys.2016.09.015] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2016] [Revised: 09/22/2016] [Accepted: 09/25/2016] [Indexed: 06/06/2023]
Abstract
The influence of variable nutritional input on life history adaptation is a central, but incompletely understood aspect of life history physiology. The wing-polymorphic cricket, Gryllus firmus, has been extensively studied with respect to the biochemical basis of life history adaptation, in particular, modification of lipid metabolism that underlies the enhanced accumulation of lipid flight fuel in the dispersing morph [LW(f)=long wings with functional flight muscles] relative to the flightless (SW=short-winged) morph. To date, biochemical studies have been undertaken almost exclusively using a single laboratory diet. Thus, the extent to which nutritional heterogeneity, likely experienced in the field, influences this key morph adaptation is unknown. We used the experimental approach of the Geometric Framework for Nutrition and employed 13 diets that differed in the amounts and ratios of protein and carbohydrate to assess how nutrient amount and balance affects morph-specific lipid biosynthesis. Greater lipid biosynthesis and allocation to the soma in the LW(f) compared with the SW morph (1) occurred across the entire protein-carbohydrate landscape and (2) is likely an important contributor to elevated somatic lipid in the LW(f) morph across the entire protein-carbohydrate landscape. Nevertheless, dietary carbohydrate strongly affected lipid biosynthesis in a morph-specific manner (to a greater degree in the LW(f) morph). Lipogenesis in the SW morph may be constrained due to its more limited lipid storage capacity compared to the LW(f) morph. Elevated activity of NADP+-isocitrate dehydrogenase (NADP+-IDH), an enzyme that produces reducing equivalents for lipid biosynthesis, was correlated with and may be an important cause of the increased lipogenesis in the LW(f) morph across most, but not all regions of the protein-carbohydrate landscape. By contrast, ATP-citrate lyase (ACL), an enzyme that catalyzes the first step in the pathway of fatty acid biosynthesis, showed complex morph-specific patterns of activity that were strongly contingent upon diet. Morph-specific patterns of NADP+-IDH and ACL activities across the nutrient landscape were much more complex than expected from previous studies on a single diet. Collectively, our results indicate that the biochemical basis of an important life history adaptation, morph-specific lipogenesis, can be canalized in the face of substantial nutritional heterogeneity. However, in some regions of the protein-carbohydrate landscape, it is strongly modulated in a morph-specific manner.
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Affiliation(s)
- Anthony J Zera
- School of Biological Sciences, University of Nebraska, Lincoln, NE 68588, United States.
| | - Rebecca Clark
- School of Biological Sciences, University of Nebraska, Lincoln, NE 68588, United States
| | - Spence Behmer
- Department of Entomology, Texas A&M University, College Station, TX 77843, United States
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7
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Kalra B, Parkash R. Trade-off of ovarian lipids and total body lipids for fecundity and starvation resistance in tropical populations of Drosophila melanogaster. J Evol Biol 2014; 27:2371-85. [DOI: 10.1111/jeb.12480] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2013] [Accepted: 08/18/2014] [Indexed: 11/30/2022]
Affiliation(s)
- B. Kalra
- Department of Genetics; Maharshi Dayanand University; Rohtak India
| | - R. Parkash
- Department of Genetics; Maharshi Dayanand University; Rohtak India
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Purification and characterization of 6-phosphogluconate dehydrogenase from the wing-polymorphic cricket, Gryllus firmus , and assessment of causes of morph-differences in enzyme activity. Comp Biochem Physiol B Biochem Mol Biol 2014; 172-173:29-38. [DOI: 10.1016/j.cbpb.2014.04.001] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2014] [Revised: 03/27/2014] [Accepted: 04/01/2014] [Indexed: 11/21/2022]
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9
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Nanoth Vellichirammal N, Zera AJ, Schilder RJ, Wehrkamp C, Riethoven JJM, Brisson JA. De novo transcriptome assembly from fat body and flight muscles transcripts to identify morph-specific gene expression profiles in Gryllus firmus. PLoS One 2014; 9:e82129. [PMID: 24416137 PMCID: PMC3885399 DOI: 10.1371/journal.pone.0082129] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2013] [Accepted: 10/22/2013] [Indexed: 11/19/2022] Open
Abstract
Wing polymorphism is a powerful model for examining many aspects of adaptation. The wing dimorphic cricket species, Gryllus firmus, consists of a long-winged morph with functional flight muscles that is capable of flight, and two flightless morphs. One (obligately) flightless morph emerges as an adult with vestigial wings and vestigial flight muscles. The other (plastic) flightless morph emerges with fully-developed wings but later in adulthood histolyzes its flight muscles. Importantly both flightless morphs have substantially increased reproductive output relative to the flight-capable morph. Much is known about the physiological and biochemical differences between the morphs with respect to adaptations for flight versus reproduction. In contrast, little is known about the molecular genetic basis of these morph-specific adaptations. To address this issue, we assembled a de novo transcriptome of G. firmus using 141.5 million Illumina reads generated from flight muscles and fat body, two organs that play key roles in flight and reproduction. We used the resulting 34,411 transcripts as a reference transcriptome for differential gene expression analyses. A comparison of gene expression profiles from functional flight muscles in the flight-capable morph versus histolyzed flight muscles in the plastic flight incapable morph identified a suite of genes involved in respiration that were highly expressed in pink (functional) flight muscles and genes involved in proteolysis highly expressed in the white (histolyzed) flight muscles. A comparison of fat body transcripts from the obligately flightless versus the flight-capable morphs revealed differential expression of genes involved in triglyceride biosynthesis, lipid transport, immune function and reproduction. These data provide a valuable resource for future molecular genetics research in this and related species and provide insight on the role of gene expression in morph-specific adaptations for flight versus reproduction.
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Affiliation(s)
| | - Anthony J. Zera
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, Nebraska, United States of America
| | - Rudolf J. Schilder
- Department of Biology, Penn State University, State College, Pennsylvania, United States of America
| | - Cody Wehrkamp
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, Nebraska, United States of America
| | - Jean-Jack M. Riethoven
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, Nebraska, United States of America
- Bioinformatics Core Research Facility, University of Nebraska-Lincoln, Lincoln, Nebraska, United States of America
| | - Jennifer A. Brisson
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, Nebraska, United States of America
- * E-mail:
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10
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Hoekstra LA, Siddiq MA, Montooth KL. Pleiotropic effects of a mitochondrial-nuclear incompatibility depend upon the accelerating effect of temperature in Drosophila. Genetics 2013; 195:1129-39. [PMID: 24026098 PMCID: PMC3813842 DOI: 10.1534/genetics.113.154914] [Citation(s) in RCA: 96] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2013] [Accepted: 08/29/2013] [Indexed: 12/21/2022] Open
Abstract
Interactions between mitochondrial and nuclear gene products that underlie eukaryotic energy metabolism can cause the fitness effects of mutations in one genome to be conditional on variation in the other genome. In ectotherms, the effects of these interactions are likely to depend upon the thermal environment, because increasing temperature accelerates molecular rates. We find that temperature strongly modifies the pleiotropic phenotypic effects of an incompatible interaction between a Drosophila melanogaster polymorphism in the nuclear-encoded, mitochondrial tyrosyl-transfer (t)RNA synthetase and a D. simulans polymorphism in the mitochondrially encoded tRNA(Tyr). The incompatible mitochondrial-nuclear genotype extends development time, decreases larval survivorship, and reduces pupation height, indicative of decreased energetic performance. These deleterious effects are ameliorated when larvae develop at 16° and exacerbated at warmer temperatures, leading to complete sterility in both sexes at 28°. The incompatible genotype has a normal metabolic rate at 16° but a significantly elevated rate at 25°, consistent with the hypothesis that inefficient energy metabolism extends development in this genotype at warmer temperatures. Furthermore, the incompatibility decreases metabolic plasticity of larvae developed at 16°, indicating that cooler development temperatures do not completely mitigate the deleterious effects of this genetic interaction. Our results suggest that the epistatic fitness effects of metabolic mutations may generally be conditional on the thermal environment. The expression of epistatic interactions in some environments, but not others, weakens the efficacy of selection in removing deleterious epistatic variants from populations and may promote the accumulation of incompatibilities whose fitness effects will depend upon the environment in which hybrids occur.
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MESH Headings
- Animals
- Base Sequence
- Cell Nucleus/genetics
- Cell Nucleus/metabolism
- DNA, Mitochondrial/genetics
- Drosophila/genetics
- Drosophila/growth & development
- Drosophila/physiology
- Drosophila Proteins/genetics
- Drosophila Proteins/metabolism
- Drosophila melanogaster/genetics
- Drosophila melanogaster/growth & development
- Drosophila melanogaster/physiology
- Epistasis, Genetic
- Evolution, Molecular
- Female
- Fertility/genetics
- Fertility/physiology
- Genes, Insect
- Genetic Fitness
- Hot Temperature
- Larva/genetics
- Larva/growth & development
- Larva/metabolism
- Male
- Mitochondria/genetics
- Mitochondria/metabolism
- Mutation
- RNA, Transfer, Tyr/chemistry
- RNA, Transfer, Tyr/genetics
- RNA, Transfer, Tyr/metabolism
- Selection, Genetic
- Species Specificity
- Tyrosine-tRNA Ligase/genetics
- Tyrosine-tRNA Ligase/metabolism
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Affiliation(s)
- Luke A. Hoekstra
- Department of Biology, Indiana University, Bloomington, Indiana 47405
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11
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Jezkova T, Leal M, Rodríguez-Robles JA. Genetic drift or natural selection? Hybridization and asymmetric mitochondrial introgression in two Caribbean lizards (Anolis pulchellus and Anolis krugi). J Evol Biol 2013; 26:1458-71. [PMID: 23663090 DOI: 10.1111/jeb.12149] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2012] [Revised: 02/20/2013] [Accepted: 02/21/2013] [Indexed: 11/28/2022]
Abstract
Hybridization and gene introgression can occur frequently between closely related taxa, but appear to be rare phenomena among members of the species-rich West Indian radiation of Anolis lizards. We investigated the pattern and possible mechanism of introgression between two sister species from Puerto Rico, Anolis pulchellus and Anolis krugi, using mitochondrial (ND2) and nuclear (DNAH3, NKTR) DNA sequences. Our findings demonstrated extensive introgression of A. krugi mtDNA (k-mtDNA) into the genome of A. pulchellus in western Puerto Rico, to the extent that k-mtDNA has mostly or completely replaced the native mtDNA of A. pulchellus on this part of the island. We proposed two not mutually exclusive scenarios to account for the interspecific matings between A. pulchellus and A. krugi. We inferred that hybridization events occurred independently in several populations, and determined that k-mtDNA haplotypes harboured in individuals of A. pulchellus can be assigned to four of the five major mtDNA clades of A. krugi. Further, the spatial distribution of k-mtDNA clades in the two species is largely congruent. Based on this evidence, we concluded that natural selection was the probable driving mechanism for the extensive k-mtDNA introgression into A. pulchellus. Our two nuclear data sets yielded different results. DNAH3 showed reciprocal monophyly of A. pulchellus and A. krugi, indicating no effect of hybridization on this marker. In contrast, the two species shared nine NKTR alleles, probably due to incomplete lineage sorting. Our study system will provide an excellent opportunity to experimentally assess the behavioural and ecological mechanisms that can lead to hybridization in closely related taxa.
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Affiliation(s)
- T Jezkova
- School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV 89154-4004, USA
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13
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Bertram S, Thomson I, Auguste B, Dawson J, Darveau CA. Variation in cricket acoustic mate attraction signalling explained by body morphology and metabolic differences. Anim Behav 2011. [DOI: 10.1016/j.anbehav.2011.08.021] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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14
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Schilder RJ, Zera AJ, Black C, Hoidal M, Wehrkamp C. The biochemical basis of life history adaptation: molecular and enzymological causes of NADP(+)-isocitrate dehydrogenase activity differences between morphs of Gryllus firmus that differ in lipid biosynthesis and life history. Mol Biol Evol 2011; 28:3381-93. [PMID: 21705380 DOI: 10.1093/molbev/msr171] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Although whole-organism aspects of life-history physiology are well studied and molecular information (e.g., transcript abundance) on life-history variation is accumulating rapidly, much less information is available on the biochemical (enzymological) basis of life-history adaptation. The present study investigated the biochemical and molecular causes of specific activity differences of the lipogenic enzyme, NADP(+)-isocitrate dehydrogenase, between genetic lines of the wing-polymorphic cricket, Gryllus firmus, which differ in lipid biosynthesis and life history. With one exception, variation among 21 Nadp(+)-Idh genomic sequences, which spanned the entire coding sequence of the gene, was restricted to a few synonymous substitutions within and among replicate flight-capable or flightless lines. No NADP(+)-IDH electromorph variation was observed among individuals within or among lines as determined by polyacrylamide gel electrophoresis. Nor did any NADP(+)-IDH kinetic or stability parameter, such as K(M) for substrate or cofactor, k(cat), or thermal denaturation, differ between flight-capable and flightless lines. By contrast, line differences in NADP(+)-IDH-specific activity strongly covaried with transcript abundance and enzyme protein concentration. These results demonstrate that NADP(+)-IDH-specific activity differences between artificially selected lines of G. firmus are due primarily, if not exclusively, to genetic variation in regulators of NADP(+)-IDH gene expression, with no observed contribution from altered catalytic efficiency of the enzyme due to changes in amino acid sequence or posttranslational modification. Kinetic analyses indicate that in vitro differences in enzyme-specific activity between flight-capable and flightless lines likely occur in vivo. This study constitutes the most comprehensive analysis to date of the biochemical and molecular causes of naturally occurring genetic variation in enzyme activity that covaries strongly with life history.
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15
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Zera AJ. Microevolution of intermediary metabolism: evolutionary genetics meets metabolic biochemistry. J Exp Biol 2011; 214:179-90. [DOI: 10.1242/jeb.046912] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
Summary
During the past decade, microevolution of intermediary metabolism has become an important new research focus at the interface between metabolic biochemistry and evolutionary genetics. Increasing recognition of the importance of integrative studies in evolutionary analysis, the rising interest in ‘evolutionary systems biology’, and the development of various ‘omics’ technologies have all contributed significantly to this developing interface. The present review primarily focuses on five prominent areas of recent research on pathway microevolution: lipid metabolism and life-history evolution; the electron transport system, hybrid breakdown and speciation; glycolysis, alcohol metabolism and population adaptation in Drosophila; chemostat selection in microorganisms; and anthocyanin pigment biosynthesis and flower color evolution. Some of these studies have provided a new perspective on important evolutionary topics that have not been investigated extensively from a biochemical perspective (hybrid breakdown, parallel evolution). Other studies have provided new data that augment previous biochemical information, resulting in a deeper understanding of evolutionary mechanisms (allozymes and biochemical adaptation to climate, life-history evolution, flower pigments and the genetics of adaptation). Finally, other studies have provided new insights into how the function or position of an enzyme in a pathway influences its evolutionary dynamics, in addition to providing powerful experimental models for investigations of network evolution. Microevolutionary studies of metabolic pathways will undoubtedly become increasingly important in the future because of the central importance of intermediary metabolism in organismal fitness, the wealth of biochemical data being provided by various omics technologies, and the increasing influence of integrative and systems perspectives in biology.
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Affiliation(s)
- Anthony J. Zera
- School of Biological Sciences, University of Nebraska, Lincoln, NE 68588, USA
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Relations between allometry, male–male interactions and dispersal in a sap beetle, Librodor japonicus. Anim Behav 2007. [DOI: 10.1016/j.anbehav.2006.09.020] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Harshman LG, Zera AJ. The cost of reproduction: the devil in the details. Trends Ecol Evol 2006; 22:80-6. [PMID: 17056152 DOI: 10.1016/j.tree.2006.10.008] [Citation(s) in RCA: 477] [Impact Index Per Article: 26.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2006] [Revised: 09/28/2006] [Accepted: 10/16/2006] [Indexed: 10/24/2022]
Abstract
The cost of reproduction is of fundamental importance in life-history evolution. However, our understanding of its mechanistic basis has been limited by a lack of detailed functional information at all biological levels. Here, we identify, evaluate and integrate recent studies in five areas examining the proximate mechanisms underlying the cost of reproduction. Rather than being alternate explanations, hormonal regulation and intermediary metabolism act in concert and have an overarching influence in shaping the cost of reproduction. Immune function is compromised by reproduction, as is resistance to environmental stress. These studies not only provide new information about mechanisms that comprise 'the cost', but also hint at an underlying evolutionarily conserved causal mechanism.
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Affiliation(s)
- Lawrence G Harshman
- School of Biological Sciences, University of Nebraska, Lincoln, NE 68588, USA.
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Telonis-Scott M, Guthridge KM, Hoffmann AA. A new set of laboratory-selected Drosophila melanogaster lines for the analysis of desiccation resistance: response to selection, physiology and correlated responses. ACTA ACUST UNITED AC 2006; 209:1837-47. [PMID: 16651550 DOI: 10.1242/jeb.02201] [Citation(s) in RCA: 67] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
Artificial selection experiments provide insights into the evolutionary factors that can shape adaptive responses and have previously been utilized to examine the physiological adaptations that can improve survival to desiccation in Drosophila melanogaster. While such studies demonstrate that multiple resistance mechanisms may arise via different base populations and selection regimes, water retention emerges as a key mechanism for desiccation survival. Here, we present the physiological, correlated response and life history data for a new set of selection lines designed for the genetic dissection of desiccation resistance. After 26 generations of selection for desiccation resistance, female survival increased twofold. In contrast to previous studies, the altered resistance was associated primarily with enhanced dehydration tolerance and increased mass and less consistently with decreased rates of water loss. Life history tradeoffs and correlated selection responses were examined and overlap with previously published data. We crossed the resistant selected lines to desiccation-sensitive lines from the same control background to examine how each heterozygous resistant chromosome (excluding four) may improve desiccation resistance and observed that most of the resistance was due to genes on the third and first chromosomes, although interaction effects with the second chromosome were also detected. Results are compared to other selection responses and highlight the multiple evolutionary solutions that can arise when organisms are faced with a common selection pressure, although water loss rate remains a common mechanism in all studies.
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Affiliation(s)
- Marina Telonis-Scott
- Centre for Environmental Stress Adaptation Research, La Trobe University, Bundoora, Victoria 3086, Australia.
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Min KJ, Hogan MF, Tatar M, O'Brien DM. Resource allocation to reproduction and soma in Drosophila: a stable isotope analysis of carbon from dietary sugar. JOURNAL OF INSECT PHYSIOLOGY 2006; 52:763-70. [PMID: 16753176 DOI: 10.1016/j.jinsphys.2006.04.004] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2006] [Revised: 04/04/2006] [Accepted: 04/06/2006] [Indexed: 05/10/2023]
Abstract
Metabolic resources in adults of holometabolous insects may derive either from larval or adult feeding. In Drosophila melanogaster, reproduction and lifespan are differently affected by larval vs. adult resource availability, and it is unknown how larval vs. adult acquired nutrients are differentially allocated to somatic and reproductive function. Here we describe the allocation of carbon derived from dietary sugar in aging female D. melanogaster. Larval and adult flies were fed diets contrasting in sucrose (13)C/(12)C, from which we determined the extent to which carbon acquired at each stage contributed to adult somatic tissue and to egg manufacture. Dietary sugar is very important in egg provisioning; at every age, roughly one half of the carbon in eggs was derived from sugar, which turned over from predominantly larval to entirely adult dietary sources. Sucrose provided approximately 40% of total somatic carbon, of which adult dietary sucrose came to supply approximately 75%. Unlike in eggs, however, adult acquired sucrose did not entirely replace the somatic carbon from larvally acquired sucrose. Because carbon from larval sucrose appears to be fairly "replaceable", larval sucrose cannot be a limiting substrate in resource allocation between reproduction and lifespan.
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Affiliation(s)
- Kyung-Jin Min
- Department of Ecology and Evolutionary Biology, Brown University, Box G-W, Providence, RI 02912, USA
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Zhao Z, Zera AJ. Biochemical basis of specialization for dispersal vs. reproduction in a wing-polymorphic cricket: morph-specific metabolism of amino acids. JOURNAL OF INSECT PHYSIOLOGY 2006; 52:646-58. [PMID: 16643945 DOI: 10.1016/j.jinsphys.2006.03.003] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2006] [Revised: 02/28/2006] [Accepted: 03/08/2006] [Indexed: 05/08/2023]
Abstract
The biochemical basis of specializations for dispersal vs. reproduction is an understudied aspect of dispersal polymorphism in insects. Using a radiolabelled amino acid, we quantified differences in in vivo amino acid metabolism between morphs of the wing-polymorphic cricket, Gryllus firmus, that trade-off early age reproduction and dispersal capability. Studies were conducted in crickets fed a variety of diets expected to influence amino acid and lipid metabolism. On the day of molt to adulthood, prior to the morph-specific trade-off between ovarian growth and biochemical preparation for flight (e.g. biosynthesis of triglyceride flight fuel), morphs did not differ in any aspect of amino acid metabolism. However, on day 5 of adulthood, when the morph-specific trade-off between ovarian growth and flight fuel production was manifest, the morphs differed substantially in each of the three aspects of amino acid metabolism studied: conversion to protein, oxidation, and conversion to lipid. Morphs also differed in degree of allocation of products of amino acid metabolism to ovaries vs. the soma. Most importantly, morphs differed in the relative metabolism of radiolabelled glycine through these pathways (i.e. biochemical trade-offs), and in the relative allocation of end products of amino acid metabolism to the soma vs. ovaries (allocation trade-offs). A functionally important interaction between amino acid and lipid metabolism was noted: greater oxidation of amino acids in the flight-capable morph spared fatty acids for enhanced conversion into triglyceride flight fuel. By contrast, greater oxidation of fatty acids by the flightless morph spared amino acids for enhanced conversion into ovarian protein. Diet significantly affected amino acid metabolism. However, MORPHxDIET interactions were rare and morphs differed in amino acid metabolism to a similar degree under the range of diets tested.
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Affiliation(s)
- Zhangwu Zhao
- School of Biological Sciences, University of Nebraska, Lincoln, NE 68588, USA.
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Zera AJ, Zhao Z. Intermediary metabolism and life-history trade-offs: differential metabolism of amino acids underlies the dispersal-reproduction trade-off in a wing-polymorphic cricket. Am Nat 2006; 167:889-900. [PMID: 16609924 DOI: 10.1086/503578] [Citation(s) in RCA: 61] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2005] [Accepted: 01/05/2006] [Indexed: 11/03/2022]
Abstract
Although the differential flow of metabolites through alternate pathways of intermediary metabolism is thought to be an important functional cause of life-history trade-offs, this phenomenon remains understudied. Using a radiolabeled amino acid, we quantified genetic differences in in vivo amino acid metabolism between morphs of the wing-polymorphic cricket Gryllus firmus that trade off early-age reproduction and dispersal capability. Lines selected for the flight-capable morph, which delays reproduction, oxidized a greater proportion of radiolabeled glycine and converted a greater amount into somatic lipid, mainly triglyceride (flight fuel). By contrast, lines selected for the flightless, reproductive morph converted a substantially greater proportion of glycine into ovarian protein. Compensatory interactions between amino acid and lipid metabolism make up a key aspect of specialization for dispersal versus reproduction in G. firmus: increased oxidation of amino acids by the flight-capable morph spares fatty acid for enhanced conversion into triglyceride flight fuel. By contrast, increased oxidation of fatty acid by the flightless morph spares amino acids for enhanced biosynthesis of ovarian protein. Studies of amino acid and lipid metabolism in G. firmus currently represent the most detailed analyses of genetic modifications of intermediary metabolism that underlie a functionally important life-history trade-off found in natural populations.
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Affiliation(s)
- Anthony J Zera
- School of Biological Sciences, University of Nebraska, Lincoln, Nebraska 68588, USA
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Hoffmann AA, Hallas R, Anderson AR, Telonis-Scott M. Evidence for a robust sex-specific trade-off between cold resistance and starvation resistance in Drosophila melanogaster. J Evol Biol 2005; 18:804-10. [PMID: 16033551 DOI: 10.1111/j.1420-9101.2004.00871.x] [Citation(s) in RCA: 83] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
In insects changes in lipid metabolism may underlie a trade-off between cold resistance and starvation resistance. To test this we examined correlated responses in independent sets of Drosophila melanogaster lines selected for increased cold resistance and increased starvation resistance. The starvation lines showed correlated patterns found in other D. melanogaster populations selected for this trait, including higher lipid levels and increased resistance to desiccation, although the selected lines did not show a longer development time as found in some other studies. Consistent with the trade-off hypothesis, selected lines with increased starvation resistance showed decreased resistance to a cold stress as measured by mortality, whereas selected lines with increased cold resistance showed a decrease in starvation resistance. To counter the possibility of inadvertent selection accounting for these patterns, selected and control lines from both selection regimes were crossed to form mass bred populations, which were left for four generations prior to establishing isofemale lines. By scoring starvation and cold resistance in these lines derived from both sets of selection regimes, we confirmed the negative association between resistance to these stresses in females but not in males. Potential implications of this trade-off for surviving cold conditions when food resources are limiting are discussed.
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Affiliation(s)
- A A Hoffmann
- Centre for Environmental Stress and Adaptation Research, La Trobe University, Bundoora, Victoria, Australia.
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Lee KP, Simpson SJ, Raubenheimer D. A comparison of nutrient regulation between solitarious and gregarious phases of the specialist caterpillar, Spodoptera exempta (Walker). JOURNAL OF INSECT PHYSIOLOGY 2004; 50:1171-1180. [PMID: 15670864 DOI: 10.1016/j.jinsphys.2004.10.009] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2004] [Revised: 10/20/2004] [Accepted: 10/22/2004] [Indexed: 05/24/2023]
Abstract
Nutritional regulatory responses were compared between solitarious and gregarious phases of the African armyworm, Spodoptera exempta. When allowed to mix between two nutritionally imbalanced but complementary foods, final-instar caterpillars in both phases selected a diet comprising more carbohydrate than protein. This contrasts with other larval lepidopterans studied to date. Only minor differences were found in the position of the intake target for the two phases, despite their different energetic requirements for migration as adults. When restricted to nutritionally imbalanced diets, caterpillars of both phases were less disposed to overeat protein on high-protein diets than carbohydrate on high-carbohydrate diets, relative to the self-composed intake target. However, in both cases gregarious larvae overingested the excess nutrient to a greater degree than did solitarious larvae. Furthermore, gregarious larvae showed higher nitrogen conversion efficiency on an extreme protein-limiting diet, and accumulated more lipid per amount of carbohydrate consumed on carbohydrate-deficient diets. These phase-associated nutritional differences are consistent with the life-history strategies of the two phases.
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Affiliation(s)
- Kwang Pum Lee
- Department of Zoology, University of Oxford, South Parks Road, Oxford OX1 3PS, UK.
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Zera AJ, Zhao Z. Effect of a Juvenile Hormone Analogue on Lipid Metabolism in a Wing‐Polymorphic Cricket: Implications for the Endocrine‐Biochemical Bases of Life‐History Trade‐Offs. Physiol Biochem Zool 2004; 77:255-66. [PMID: 15095245 DOI: 10.1086/383500] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/12/2003] [Indexed: 11/03/2022]
Abstract
The wing-polymorphic cricket, Gryllus firmus, has a flight-capable morph (LW[f]: long winged with functional flight muscles) and a flightless morph (SW: short winged with reduced nonfunctional flight muscles) that differ genetically in many aspects of lipid metabolism. To determine whether these differences result from genetically based alterations in endocrine regulation, the juvenile hormone mimic, methoprene, was applied to the LW(f) morph. This hormone manipulation converted the LW(f) morph into a SW phenocopy with respect to all aspects of lipid metabolism studied; that is, methoprene application decreased in vivo biosynthesis of total lipid and triglyceride, increased absolute and relative biosynthesis of phospholipid, increased oxidation of fatty acids, and decreased in vitro specific activities of each of six lipogenic enzymes and a transaminase. Furthermore, methoprene increased ovarian growth and decreased fat body mass and flight muscle mass in the LW(f) morph. Differences in each of these biochemical, morphological, or reproductive traits between hormone-treated and control LW(f) females were similar in magnitude to differences between unmanipulated LW(f) and SW females. Variation in endocrine regulation contributes significantly to genetically based differences in lipid metabolism between LW(f) and SW females. This is the first evidence for endocrine regulation of a genetically based life-history trade-off operating via hormonal effects on specific metabolic pathways and enzymes of intermediary metabolism.
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Affiliation(s)
- Anthony J Zera
- School of Biological Sciences, University of Nebraska, Lincoln, Nebraska 68588, USA.
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Zera AJ, Zhao Z. Morph-dependent fatty acid oxidation in a wing-polymorphic cricket: implications for the trade-off between dispersal and reproduction. JOURNAL OF INSECT PHYSIOLOGY 2003; 49:933-943. [PMID: 14511826 DOI: 10.1016/s0022-1910(03)00152-5] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Although a considerable amount of information is available on the ecology and physiology of wing polymorphism, much less is known about the biochemical-genetic basis of morph specialization for dispersal versus reproduction. Previous studies have shown that the dispersing morph of the wing-polymorphic cricket, Gryllus firmus, prioritizes the accumulation of triglyceride flight fuel over ovarian growth, while the opposite occurs in the flightless morph during the first week of adulthood. In this study, we compared the in vivo rate of lipid oxidation between genetic stocks of flight-capable versus flightless morphs to determine the role of lipid catabolism in morph specialization for flight versus reproduction. During the first five days of adulthood, in the absence of flight, fatty acid oxidation was substantially lower in the dispersing morph relative to the flightless morph, when either radiolabeled acetate or palmitate was used as a substrate. Differences between the morphs in fatty acid oxidation were genetically based, occurred co-incident with morph-specific differences in triglyceride accumulation and ovarian growth, and were observed on a variety of diets. A genetically based trade-off in the relative conversion of palmitate into CO(2) versus triglyceride was observed in morphs of G. firmus. Decreased oxidation of fatty acid and increased biosynthesis of triglyceride, both appear to play an important role in flight fuel accumulation, and hence morph specialization for flight. Conversely, increased oxidation of fatty acid likely fuels the enhanced ovarian growth in the flightless morph. The results of the present study on fatty acid catabolism, and previous studies on triglyceride and phospholipid biosynthesis, provide the first direct evidence that genetically based differences in in vivo flux through pathways of intermediary metabolism underlie a trade-off between flight capability and reproduction--a trade-off of central importance in insects.
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Affiliation(s)
- Anthony J Zera
- School of Biological Sciences, University of Nebraska, Lincoln, NE 68588, USA.
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