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Centenaro G, Petraglia A, Carbognani M, Piotti A, Hudek C, Büntgen U, Crivellaro A. The oldest known clones of Salix herbacea growing in the Northern Apennines, Italy are at least 2000 years old. AMERICAN JOURNAL OF BOTANY 2023; 110:e16243. [PMID: 37755870 DOI: 10.1002/ajb2.16243] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2023] [Revised: 07/28/2023] [Accepted: 07/28/2023] [Indexed: 09/28/2023]
Abstract
PREMISE Dominant in many ecosystems around the world, clonal plants can reach considerable ages and sizes. Due to their modular growth patterns, individual clonal plants (genets) can consist of many subunits (ramets). Since single ramets do not reflect the actual age of genets, the ratio between genet size (radius) and longitudinal annual growth rate (LAGR) of living ramets is often used to approximate the age of clonal plants. However, information on how the LAGR changes along ramets and how LAGR variability may affect age estimates of genets is still limited. METHODS We assessed the variability of LAGR based on wood-section position along the ramets and on the duration of the growing season on three genetically distinct genets of Salix herbacea growing in the Northern Apennines (Italy). We compared genet ages estimated by dividing genet radius by the LAGRs of its ramets. RESULTS LAGR increased significantly from the stem apex to the root collar; indicating that ramet growth rate decreased with time. Furthermore, a difference of ca. 2 weeks in the onset of the growing period did not impact LAGR. Considering the high LAGR variability, we estimated that the three genets started to grow between ~2100 and ~7000 years ago, which makes them the oldest known clones of S. herbacea even considering the most conservative age estimate. CONCLUSIONS Our findings indicate that analyzing ramets at the root collar provides an integrative measurement of their overall LAGR, which is crucial for estimating the age of genets.
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Affiliation(s)
- Giada Centenaro
- Department of Agricultural and Forest Sciences and Engineering, University of Lleida, Lleida, Spain
- Joint Research Unit CTFC - AGROTECNIO - CERCA, Solsona, Spain
| | - Alessandro Petraglia
- Department of Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parma, Italy
| | - Michele Carbognani
- Department of Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parma, Italy
| | - Andrea Piotti
- Institute of Biosciences and BioResources (IBBR), National Research Council (CNR), Firenze, Italy
| | - Csilla Hudek
- Lancaster University, Lancaster Environment Centre, Lancaster, UK
| | - Ulf Büntgen
- Department of Geography, University of Cambridge, Cambridge, UK
- Swiss Federal Research Institute WSL, Birmensdorf, Switzerland
- Global Change Research Centre (CzechGlobe), Brno, Czech Republic
- Department of Geography, Masaryk University, Brno, Czech Republic
| | - Alan Crivellaro
- Forest Biometrics Laboratory, Faculty of Forestry, "Stefan cel Mare" University of Suceava, Suceava, Romania
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Komárková M, Chromý J, Pokorná E, Soudek P, Máchová P. Physiological and Transcriptomic Response of Grey Poplar ( Populus ×canescens Aiton Sm.) to Cadmium Stress. PLANTS (BASEL, SWITZERLAND) 2020; 9:E1485. [PMID: 33158073 PMCID: PMC7694188 DOI: 10.3390/plants9111485] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/17/2020] [Revised: 10/29/2020] [Accepted: 10/30/2020] [Indexed: 12/22/2022]
Abstract
(1) Background: Populus ×canescens (Aiton) Sm. is a fast-growing woody plant belonging to the family Salicaceae. Two poplar genotypes characterized by unique phenotypic traits (TP11 and TP20) were chosen to be characterized and tested for a physiological and transcriptomic response to Cd stress. (2) Methods: A comparative analysis of the effects of exposure to high cadmium (Cd) concentrations (10 µM and 100 µM) of TP11 and TP20 was performed. (3) Results: Neither of the tested Cd concentration negatively affected plant growth; however, the chlorophyll content significantly decreased. The potassium (K) content was higher in the shoots than in the roots. The magnesium concentrations were only slightly affected by Cd treatment. The zinc content in the shoots of TP20 was lower than that in the shoots of TP11. Cd accumulation was higher in the roots than in the shoots. After 10 days of exposure, 10 µM Cd resulted in comparable amounts of Cd in the roots and shoots of TP20. The most significant change in transcript amount was observed in endochitinase 2, 12-oxophytodienoate reductase 1 and phi classglutathione S-transferase. (4) Conclusions: Our study provided new insights for effective assessing the ability of different poplar genotypes to tolerate Cd stress and underlying Cd tolerance.
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Affiliation(s)
- Martina Komárková
- Forestry and Game Management Research Institute, Strnady, 25202 Jiloviste, Czech Republic; (J.C.); (E.P.); (P.M.)
| | - Jakub Chromý
- Forestry and Game Management Research Institute, Strnady, 25202 Jiloviste, Czech Republic; (J.C.); (E.P.); (P.M.)
| | - Eva Pokorná
- Forestry and Game Management Research Institute, Strnady, 25202 Jiloviste, Czech Republic; (J.C.); (E.P.); (P.M.)
| | - Petr Soudek
- The Czech Academy of Sciences, Institute of Experimental Botany, 16502 Prague, Czech Republic;
| | - Pavlína Máchová
- Forestry and Game Management Research Institute, Strnady, 25202 Jiloviste, Czech Republic; (J.C.); (E.P.); (P.M.)
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The potential of the decay fungus Chondrostereum purpureum in the biocontrol of broadleaved tree species. FUNGAL ECOL 2017. [DOI: 10.1016/j.funeco.2017.09.001] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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4
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Politov DV, Belokon YS, Shatokhina AV, Belokon MM, Khanov NA, Mudrik EA, Polyakova TA, Azarova AB, Shestibratov KA. Molecular Identification and Karyological Analysis of a Rampant Aspen Populus tremula L. (Salicaceae) Clone. INTERNATIONAL JOURNAL OF PLANT GENOMICS 2017; 2017:5636314. [PMID: 28512468 PMCID: PMC5420415 DOI: 10.1155/2017/5636314] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/18/2016] [Revised: 02/17/2017] [Accepted: 02/26/2017] [Indexed: 06/07/2023]
Abstract
A rampant highly heterozygous aspen (Populus tremula L.) clone "Meshabash" has been revealed in course of population genetic diversity analysis in a native stand in the Republic of Tatarstan, Russia. Here we report the results of karyological analysis showing that this highly vigorous clone is diploid (2n = 38) while typically triploid aspen demonstrates increased growth rate and resistance to aspen trunk rot caused by fungus Phellinus tremulae. By means of DNA identification of a series of model trees using 14 SSR loci we outlined the area occupied by this clone (at least 1.94 ha) and demonstrated that its ramets constitute 40 out of 48 genotyped trunks on the plot with the maximal distance between ramets 254 m. Since aspen is able to regenerate after cutting or die-off of maternal tree by root suckers at a distance up to 20-35 m this assumed that current stand appeared as a result of such spreading from an ortet tree during at least 5 generations. Trunk rot damage in the wood of model trees indicated low influence of this pathogen on viability and performance of the studied clone that can be associated with its extreme heterozygosity level (0.926) exceeding all the studied trees in this research plot and in three other control samples.
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Affiliation(s)
- Dmitry V. Politov
- Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia
| | - Yuri S. Belokon
- Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia
| | - Anna V. Shatokhina
- Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia
| | - Maryana M. Belokon
- Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia
| | - Nail A. Khanov
- Laboratory of Biotechnologies, Sabinsky Training Experimental Forestry, Leskhoz, Republic of Tatarstan 422062, Russia
| | - Elena A. Mudrik
- Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia
| | - Tatyana A. Polyakova
- Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia
- Forest Genetics Department, Russian Center for Forest Health, Pushkino 141207, Russia
| | - Anna B. Azarova
- Forest Biotechnology Group, Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Pushchino Branch, Pushchino 142290, Russia
| | - Konstantin A. Shestibratov
- Forest Biotechnology Group, Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Pushchino Branch, Pushchino 142290, Russia
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Politov DV, Belokon MM, Belokon YS, Polyakova TA, Shatokhina AV, Mudrik EA, Khanov NA, Shestibratov KA. Microsatellite analysis of clonality and individual heterozygosity in natural populations of aspen Populus tremula L.: Identification of highly heterozygous clone. RUSS J GENET+ 2016. [DOI: 10.1134/s1022795416060107] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Hamberg L, Hantula J. The efficacy of six elite isolates of the fungus Chondrostereum purpureum against the sprouting of European aspen. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2016; 171:217-224. [PMID: 26899306 DOI: 10.1016/j.jenvman.2016.02.016] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2015] [Revised: 02/04/2016] [Accepted: 02/08/2016] [Indexed: 06/05/2023]
Abstract
The sprouting of broad-leaved trees after cutting is problematic in forest regeneration areas, along roads and railways, under electric power and above gas pipe lines. In Finland, one of the most difficult species to control in these areas is the European aspen (Populus tremula), which produces both stump sprouts and root suckers after saplings have been cut. In this study, we investigated whether a decay fungus of broad-leaved trees, Chondrostereum purpureum, could be used as a biological control agent against aspen sprouting. The efficacy of six elite strains of C. purpureum (improved earlier in a breeding process) was investigated on aspen for three years. The most efficient C. purpureum strain, R53, tested earlier on birch (Betula pendula and B. pubescens), was efficient in causing mortality of aspen stumps and preventing the development of root suckers. With this strain, stump mortality was 78%, while significantly lower in control stumps which were cut only (47%). Aspen trees in the vicinity of the treatments (within a 10 m radius around each sapling) decreased the efficacy of C. purpureum. This study shows that the decay fungus C. purpureum can successfully be used in the sprout control of aspen saplings.
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Affiliation(s)
- Leena Hamberg
- Natural Resources Institute Finland (Luke), Jokiniemenkuja 1, FI-01301, Vantaa, Finland.
| | - Jarkko Hantula
- Natural Resources Institute Finland (Luke), Jokiniemenkuja 1, FI-01301, Vantaa, Finland.
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Douhovnikoff V, Leventhal M. The use of Hardy-Weinberg Equilibrium in clonal plant systems. Ecol Evol 2016; 6:1173-80. [PMID: 26839683 PMCID: PMC4725330 DOI: 10.1002/ece3.1946] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2015] [Revised: 12/08/2015] [Accepted: 12/09/2015] [Indexed: 11/07/2022] Open
Abstract
Traditionally population genetics precludes the use of the same genetic individual more than once in Hardy-Weinberg (HW) based calculations due to the model's explicit assumptions. However, when applied to clonal plant populations this can be difficult to do, and in some circumstances, it may be ecologically informative to use the ramet as the data unit. In fact, ecologists have varied the definition of the individual from a strict adherence to a single data point per genotype to a more inclusive approach of one data point per ramet. With the advent of molecular tools, the list of facultatively clonal plants and the recognition of their ecological relevance grows. There is an important risk of misinterpretation when HW calculations are applied to a clonal plant not recognized as clonal, as well as when the definition of the individual for those calculations is not clearly stated in a known clonal species. Focusing on heterozygosity values, we investigate cases that demonstrate the extreme range of potential modeling outcomes and describe the different contexts where a particular definition could better meet ecological modeling goals. We emphasize that the HW model can be ecologically relevant when applied to clonal plants, but caution is necessary in how it is used, reported, and interpreted. We propose that in known clonal plants, both genotype (GHet) and ramet (RHet) based calculations are reported to define the full range of potential values and better facilitate cross-study comparisons.
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Affiliation(s)
| | - Matthew Leventhal
- Biology DepartmentBowdoin College6500 College StationBrunswickMaine04011
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Politov DV, Belokon MM, Belokon YS, Polyakova TA, Shatokhina AV, Mudrik EA, Azarova AB, Filippov MV, Shestibratov KA. Application of Microsatellite Loci for Molecular Identification of Elite Genotypes, Analysis of Clonality, and Genetic Diversity in Aspen Populus tremula L. (Salicaceae). INTERNATIONAL JOURNAL OF PLANT GENOMICS 2015; 2015:261518. [PMID: 26823661 PMCID: PMC4707373 DOI: 10.1155/2015/261518] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/31/2015] [Accepted: 12/02/2015] [Indexed: 06/05/2023]
Abstract
Testing systems for molecular identification of micropropagated elite aspen (Populus tremula L.) genotypes were developed on the base on microsatellite (SSR) loci. Out of 33 tested microsatellite loci, 14 were selected due to sustainable PCR amplification and substantial variability in elite clones of aspen aimed for establishment of fast-rotated forest plantations. All eight tested clones had different multilocus genotypes. Among 114 trees from three reference native stands located near the established plantations, 80 haplotypes were identified while some repeated genotypes were attributed to natural clones which appeared as a result of sprouting. The selected set of SSR markers showed reliable individual identification with low probability of appearance of identical aspen genotypes (a minimum of 4.8 · 10(-10) and 1 × 10(-4) for unrelated and related individuals, resp.). Case studies demonstrating practical applications of the test system are described including analysis of clonal structure and levels of genetic diversity in three natural aspen stands growing in the regions where plantations made of elite clones were established.
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Affiliation(s)
- Dmitry V. Politov
- Vavilov Institute of General Genetics, Russian Academy of Sciences, Gubkin Street 3, Moscow 119991, Russia
| | - Maryana M. Belokon
- Vavilov Institute of General Genetics, Russian Academy of Sciences, Gubkin Street 3, Moscow 119991, Russia
| | - Yuri S. Belokon
- Vavilov Institute of General Genetics, Russian Academy of Sciences, Gubkin Street 3, Moscow 119991, Russia
| | - Tatyana A. Polyakova
- Vavilov Institute of General Genetics, Russian Academy of Sciences, Gubkin Street 3, Moscow 119991, Russia
| | - Anna V. Shatokhina
- Vavilov Institute of General Genetics, Russian Academy of Sciences, Gubkin Street 3, Moscow 119991, Russia
| | - Elena A. Mudrik
- Vavilov Institute of General Genetics, Russian Academy of Sciences, Gubkin Street 3, Moscow 119991, Russia
| | - Anna B. Azarova
- Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Pushchino Branch, Pushchino 142290, Russia
| | - Mikhail V. Filippov
- Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Pushchino Branch, Pushchino 142290, Russia
| | - Konstantin A. Shestibratov
- Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Pushchino Branch, Pushchino 142290, Russia
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9
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Zhang C, Vornam B, Volmer K, Prinz K, Kleemann F, Köhler L, Polle A, Finkeldey R. Genetic diversity in aspen and its relation to arthropod abundance. FRONTIERS IN PLANT SCIENCE 2015; 5:806. [PMID: 25674097 PMCID: PMC4309117 DOI: 10.3389/fpls.2014.00806] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2014] [Accepted: 12/23/2014] [Indexed: 05/27/2023]
Abstract
The ecological consequences of biodiversity have become a prominent public issue. Little is known on the effect of genetic diversity on ecosystem services. Here, a diversity experiment was established with European and North American aspen (Populus tremula, P. tremuloides) planted in plots representing either a single deme only or combinations of two, four and eight demes. The goals of this study were to explore the complex inter- and intraspecific genetic diversity of aspen and to then relate three measures for diversity (deme diversity, genetic diversity determined as Shannon index or as expected heterozygosity) to arthropod abundance. Microsatellite and AFLP markers were used to analyze the genetic variation patterns within and between the aspen demes and deme mixtures. Large differences were observed regarding the genetic diversity within demes. An analysis of molecular variance revealed that most of the total genetic diversity was found within demes, but the genetic differentiation among demes was also high. The complex patterns of genetic diversity and differentiation resulted in large differences of the genetic variation within plots. The average diversity increased from plots with only one deme to plots with two, four, and eight demes, respectively and separated plots with and without American aspen. To test whether intra- and interspecific diversity impacts on ecosystem services, arthropod abundance was determined. Increasing genetic diversity of aspen was related to increasing abundance of arthropods. However, the relationship was mainly driven by the presence of American aspen suggesting that species identity overrode the effect of intraspecific variation of European aspen.
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Affiliation(s)
- Chunxia Zhang
- College of Forestry, Northwest A&F UniversityShaanxi, China
- Forest Genetics and Forest Tree Breeding, Büsgen-Institute, Georg-August-Universität GöttingenGöttingen, Germany
| | - Barbara Vornam
- Forest Genetics and Forest Tree Breeding, Büsgen-Institute, Georg-August-Universität GöttingenGöttingen, Germany
| | - Katharina Volmer
- Forest Botany and Tree Physiology, Büsgen-Institute, Georg-August-Universität GöttingenGöttingen, Germany
| | - Kathleen Prinz
- Forest Genetics and Forest Tree Breeding, Büsgen-Institute, Georg-August-Universität GöttingenGöttingen, Germany
| | - Frauke Kleemann
- Forest Botany and Tree Physiology, Büsgen-Institute, Georg-August-Universität GöttingenGöttingen, Germany
| | - Lars Köhler
- Forest Botany and Tree Physiology, Büsgen-Institute, Georg-August-Universität GöttingenGöttingen, Germany
| | - Andrea Polle
- Forest Botany and Tree Physiology, Büsgen-Institute, Georg-August-Universität GöttingenGöttingen, Germany
| | - Reiner Finkeldey
- Forest Genetics and Forest Tree Breeding, Büsgen-Institute, Georg-August-Universität GöttingenGöttingen, Germany
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Alves RJV, Da Silva NG, Fernandes Júnior AJ, Guimarães AR. Longevity of the Brazilian underground tree Jacaranda decurrens Cham. AN ACAD BRAS CIENC 2013; 85:671-7. [PMID: 23828362 DOI: 10.1590/s0001-37652013005000038] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2012] [Accepted: 10/05/2012] [Indexed: 11/22/2022] Open
Abstract
Underground trees are a rare clonal growth form. In this survey we describe the branching pattern and estimate the age of the underground tree Jacaranda decurrens Cham. (Bignoniaceae), an endangered species from the Brazilian Cerrado, with a crown diameter of 22 meters. The mean age calculated for the individual was 3,801 years, making it one of the oldest known living Neotropical plants.
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Affiliation(s)
- Ruy J V Alves
- Museu Nacional, Departamento de Botânica, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brasil.
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Dodd RS, Mayer W, Nettel A, Afzal-Rafii Z. Clonal growth and fine-scale genetic structure in tanoak (Notholithocarpus densiflorus: Fagaceae). J Hered 2012; 104:105-14. [PMID: 23109719 DOI: 10.1093/jhered/ess080] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
The combination of sprouting and reproduction by seed can have important consequences on fine-scale spatial distribution of genetic structure (SGS). SGS is an important consideration for species' restoration because it determines the minimum distance among seed trees to maximize genetic diversity while not prejudicing locally adapted genotypes. Local environmental conditions can be expected to influence levels of clonal spread and SGS, particularly in the case of disturbance regimes such as fire. Here, we characterize fine-scale genetic structure and clonal spread in tanoak from drier upland sites and more mesic lowland woodlands. Clonal spread was a significant mode of stand development, but spread was limited on average to about 5-6 m. Gene dispersal was decomposed into clonal and sexual components. The latter varied according to whether it was estimated from all ramets with the clonal component removed or for a single ramet per genet. We used the difference in these 2 estimates of gene dispersal as a measure of the effect of clonality on effective population size in this species. Although upland sites had a greater number of ramets per genet, most of the other indices computed were not significantly different. However, they tended to show greater heterozygote excess and shorter gene dispersal distances than the lowland sites. The average distance among inferred sibships on upland sites was approximately at the scale of maximum clonal range. This was not the case on lowland sites, where sibs were more dispersed. We recommend minimum distances among seed trees to avoid selecting clones and to maximize genetic diversity for restoration.
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Affiliation(s)
- Richard S Dodd
- Department of Environmental Science Policy and Management, University of California, Berkeley, CA 94720, USA
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12
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Robinson KM, Ingvarsson PK, Jansson S, Albrectsen BR. Genetic variation in functional traits influences arthropod community composition in aspen (Populus tremula L.). PLoS One 2012; 7:e37679. [PMID: 22662190 PMCID: PMC3360762 DOI: 10.1371/journal.pone.0037679] [Citation(s) in RCA: 62] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2011] [Accepted: 04/24/2012] [Indexed: 11/19/2022] Open
Abstract
We conducted a study of natural variation in functional leaf traits and herbivory in 116 clones of European aspen, Populus tremula L., the Swedish Aspen (SwAsp) collection, originating from ten degrees of latitude across Sweden and grown in a common garden. In surveys of phytophagous arthropods over two years, we found the aspen canopy supports nearly 100 morphospecies. We identified significant broad-sense heritability of plant functional traits, basic plant defence chemistry, and arthropod community traits. The majority of arthropods were specialists, those coevolved with P. tremula to tolerate and even utilize leaf defence compounds. Arthropod abundance and richness were more closely related to plant growth rates than general chemical defences and relationships were identified between the arthropod community and stem growth, leaf and petiole morphology, anthocyanins, and condensed tannins. Heritable genetic variation in plant traits in young aspen was found to structure arthropod community; however no single trait drives the preferences of arthropod folivores among young aspen genotypes. The influence of natural variation in plant traits on the arthropod community indicates the importance of maintaining genetic variation in wild trees as keystone species for biodiversity. It further suggests that aspen can be a resource for the study of mechanisms of natural resistance to herbivores.
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Affiliation(s)
- Kathryn M. Robinson
- Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, Umeå, Sweden
| | - Pär K. Ingvarsson
- Department of Ecology and Environmental Science, Umeå University, Umeå, Sweden
| | - Stefan Jansson
- Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, Umeå, Sweden
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Fine-scale temporal and spatial variation of taxon and clonal structure in the Daphnia longispina hybrid complex in heterogeneous environments. BMC Evol Biol 2012; 12:12. [PMID: 22280487 PMCID: PMC3305588 DOI: 10.1186/1471-2148-12-12] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2011] [Accepted: 01/27/2012] [Indexed: 11/16/2022] Open
Abstract
Background Cyclical parthenogenetic water fleas of the genus Daphnia have become a prominent model organism in ecology and evolution. In the past, analyses of their population structure have been limited by the prevailing use of allozyme markers, which in general do not allow for the distinction of individual clones. In this study, we used 10 microsatellite markers to track changes in the taxonomic and clonal composition of Daphnia populations, and traced the abundance of the most common clones in two European reservoirs. One of the localities was inhabited by a single species of the Daphnia longispina complex (D. galeata), the other by two parental species (D. galeata and D. longispina) and their interspecific hybrids. The study took place during the transition from summer stratification to autumn mixing, representing a period of major environmental change within lake habitats. Results In both reservoirs, we observed temporal (generation-to-generation) and spatial (along the heterogeneous reservoir environment) changes in Daphnia community structure. In the single-species reservoir, the clonal diversity of D. galeata increased with time, as a few dominant clones were replaced by a higher number of less common clones. A loss in selective advantage for the dominant clones may have been due to gradual changes in the environment, or due to selection acting in a negative frequency-dependent manner. In the multispecies reservoir, there were no apparent temporal trends in clonal diversity but we observed significantly lower clonal diversity in the interspecific hybrids than in the coexisting parental species, supporting the existence of reproductive barriers between the parental genomes. Conclusions Our study, tracing clonal lineages of Daphnia in time and space by the fine-resolution markers, contributes to the understanding of how clonal reproduction impacts community structure in cyclically parthenogenetic organisms.
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Lee KM, Kim YY, Hyun JO. Genetic variation in populations of Populus davidiana Dode based on microsatellite marker analysis. Genes Genomics 2011. [DOI: 10.1007/s13258-010-0148-9] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Edenius L, Ericsson G, Kempe G, Bergström R, Danell K. The effects of changing land use and browsing on aspen abundance and regeneration: a 50-year perspective from Sweden. J Appl Ecol 2010. [DOI: 10.1111/j.1365-2664.2010.01923.x] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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de Witte LC, Stöcklin J. Longevity of clonal plants: why it matters and how to measure it. ANNALS OF BOTANY 2010; 106:859-70. [PMID: 20880935 PMCID: PMC2990663 DOI: 10.1093/aob/mcq191] [Citation(s) in RCA: 89] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/23/2010] [Revised: 07/16/2010] [Accepted: 08/25/2010] [Indexed: 05/18/2023]
Abstract
BACKGROUND Species' life-history and population dynamics are strongly shaped by the longevity of individuals, but life span is one of the least accessible demographic traits, particularly in clonal plants. Continuous vegetative reproduction of genets enables persistence despite low or no sexual reproduction, affecting genet turnover rates and population stability. Therefore, the longevity of clonal plants is of considerable biological interest, but remains relatively poorly known. SCOPE Here, we critically review the present knowledge on the longevity of clonal plants and discuss its importance for population persistence. Direct life-span measurements such as growth-ring analysis in woody plants are relatively easy to take, although, for many clonal plants, these methods are not adequate due to the variable growth pattern of ramets and difficult genet identification. Recently, indirect methods have been introduced in which genet size and annual shoot increments are used to estimate genet age. These methods, often based on molecular techniques, allow the investigation of genet size and age structure of whole populations, a crucial issue for understanding their viability and persistence. However, indirect estimates of clonal longevity are impeded because the process of ageing in clonal plants is still poorly understood and because their size and age are not always well correlated. Alternative estimators for genet life span such as somatic mutations have recently been suggested. CONCLUSIONS Empirical knowledge on the longevity of clonal species has increased considerably in the last few years. Maximum age estimates are an indicator of population persistence, but are not sufficient to evaluate turnover rates and the ability of long-lived clonal plants to enhance community stability and ecosystem resilience. In order to understand the dynamics of populations it will be necessary to measure genet size and age structure, not only life spans of single individuals, and to use such data for modelling of genet dynamics.
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Affiliation(s)
- Lucienne C de Witte
- Section of Plant Ecology, Institute of Botany, University of Basel, Schönbeinstrasse 6, 4056 Basel, Switzerland.
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He C, Zheng S, Zhang J, Duan A, Zeng Y, Cui K. Clonal reproduction and natural variation of Populus canescens patches. TREE PHYSIOLOGY 2010; 30:1383-1390. [PMID: 21030405 DOI: 10.1093/treephys/tpq083] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
Trees growing in their natural habitat represent a valuable resource for elucidating mechanisms of adaptation to environmental constraints. Along the Erqis river, there are various Populus forests, which provide 'natural laboratories' for studying tree ecophysiological responses to their habitat. Reproduction strategies and natural variation of the 'mosaic' distributed Populus canescens patches were studied using a proteomic approach and nuclear microsatellite markers. Clonal reproduction was the primary reproduction strategy of these P. canescens patches. Forty-eight percent of the locations represented in one or two P. canescens patches were identified. In total, 83 different proteins were identified in 118 of 119 protein spots, most of them involved in metabolism. Distinct proteomes and post-translational modifications were found in different P. canescens patches. The differences in the proteomes originate both from the expression of different protein isoforms with the same function and from the differential expression of proteins with different functions, suggesting that different patches might have a functional basis for their adaptation to their environments. Our studies provide a good example of applying proteomics to measure natural variation between patches and will provide a basis for understanding how trees survive through their responses to natural conditions.
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Affiliation(s)
- Caiyun He
- Key Laboratory of Silviculture of the State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, People's Republic of China
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Nikula S, Vapaavuori E, Manninen S. Urbanization-related changes in European aspen (Populus tremula L.): leaf traits and litter decomposition. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2010; 158:2132-2142. [PMID: 20338678 DOI: 10.1016/j.envpol.2010.02.025] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/05/2010] [Revised: 02/15/2010] [Accepted: 02/27/2010] [Indexed: 05/29/2023]
Abstract
We investigated foliar and litter responses of European aspen (Populus tremula L.) to urbanization, including factors such as increased temperature, moisture stress and nitrogen (N) deposition. Leaf samples were collected in 2006-2008 from three urban and three rural forest stands in the Helsinki Metropolitan Area, southern Finland, and reciprocal litter transplantations were established between urban and rural sites. Urban leaves exhibited a higher amount of epicuticular waxes and N concentration, and a lower C:N ratio than rural ones, but there was no difference in specific leaf area. Urban litter had a slightly higher N concentration, lower concentrations of lignin and total phenolics, and was more palatable to a macrofaunal decomposer. Moreover, litter decay was faster at the urban site and for urban litter. Urbanization thus resulted in foliar acclimatization in terms of increased amount of epicuticular waxes, as well as in accelerated decomposition of the N-richer leaf litter.
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Affiliation(s)
- Suvi Nikula
- Department of Biosciences, P.O. Box 56, 00014 University of Helsinki, Finland.
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19
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Ibrahim MA, Mäenpää M, Hassinen V, Kontunen-Soppela S, Malec L, Rousi M, Pietikäinen L, Tervahauta A, Kärenlampi S, Holopainen JK, Oksanen EJ. Elevation of night-time temperature increases terpenoid emissions from Betula pendula and Populus tremula. JOURNAL OF EXPERIMENTAL BOTANY 2010; 61:1583-95. [PMID: 20181662 PMCID: PMC2852659 DOI: 10.1093/jxb/erq034] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2009] [Revised: 01/19/2010] [Accepted: 01/21/2010] [Indexed: 05/09/2023]
Abstract
Volatile organic compounds (VOCs) are expected to have an important role in plant adaptation to high temperatures. The impacts of increasing night-time temperature on daytime terpenoid emissions and related gene expression in silver birch (Betula pendula) and European aspen (Populus tremula) clones were studied. The plants were grown under five different night-time temperatures (6, 10, 14, 18, and 22 degrees C) while daytime temperature was kept at a constant 22 degrees C. VOC emissions were collected during the daytime and analysed by gas chromatography-mass spectrometry (GC-MS). In birch, emissions per leaf area of the C11 homoterpene 4,8-dimethy1-nona-1,3,7-triene (DMNT) and several sesquiterpenes were consistently increased with increasing night-time temperature. Total sesquiterpene (SQT) emissions showed an increase at higher temperatures. In aspen, emissions of DMNT and beta-ocimene increased from 6 degrees C to 14 degrees C, while several other monoterpenes and the SQTs (Z,E)-alpha-farnesene and (E,E)-alpha-farnesene increased up to 18 degrees C. Total monoterpene and sesquiterpene emission peaked at 18 degrees C, whereas isoprene emissions decreased at 22 degrees C. Leaf area increased across the temperature range of 6-22 degrees C by 32% in birch and by 59% in aspen. Specific leaf area (SLA) was also increased in both species. The genetic regulation of VOC emissions seems to be very complex, as indicated by several inverse relationships between emission profiles and expression of several regulatory genes (DXR, DXS, and IPP). The study indicates that increasing night temperature may strongly affect the quantity and quality of daytime VOC emissions of northern deciduous trees.
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Affiliation(s)
- Mohamed A Ibrahim
- Department of Environmental Science, University of Eastern Finland, PO Box 1627, FI-70211 Kuopio, Finland.
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20
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Brundu G, Lupi R, Zapelli I, Fossati T, Patrignani G, Camarda I, Sala F, Castiglione S. The origin of clonal diversity and structure of Populus alba in Sardinia: evidence from nuclear and plastid microsatellite markers. ANNALS OF BOTANY 2008; 102:997-1006. [PMID: 18845663 PMCID: PMC2712408 DOI: 10.1093/aob/mcn192] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
BACKGROUND AND AIMS Populus alba is a thermophilic forest tree present in the Mediterranean basin. Its habitat is highly fragmented and its distribution range has been subject to long-term human interference, resulting in debate surrounding whether certain populations are native or exotic in origin. In particular, populations from the islands of Corsica and Sardinia are of uncertain origin. While populations of P. alba mainly reproduce sexually, clonal reproduction is also common. The aims of this study were to locate and molecularly characterize the poorly studied island populations of P. alba and compare these with samples from various spatial scales, in order to provide information on the genetic structure and phylogeography of this species. This information will provide evidence on whether the species is native to Sardinia, which is important for the development of conservation strategies. METHODS DNA extracts were obtained from the following P. alba trees: 159 from Sardinia, 47 from Ticino regional park (northern Italy), 15 acquired from an Italian Germoplasm Bank (IRC; Italian Reference Collection) and 28 from the Mediterranean basin (MB). Genetic polymorphisms were revealed at nuclear and chloroplast DNA (cpDNA) microsatellite loci, both at the island scale (Sardinia) and at broader scales, for comparative assessment of the genetic and genotypic diversity and phylogeography. KEY RESULTS Based on nuclear microsatellite loci, Sardinian white poplar consists of a small number of genets (26), each of which is represented by several ramets. Despite the uniqueness of the Sardinian haplotypes and the very low value of genetic diversity at the cpDNA level (vK = 0.15), the HT (0.60) and the AR (3.61) values, estimated at the nuclear level for Sardinia, were comparable with those of the other populations and collections. CONCLUSIONS The uniqueness of the cpDNA haplotypes, the prevalence of clonality and the restricted number of genets recorded suggest that Sardinian white poplar could be a floristic relict of the native flora of the island, which has spread through available habitats on the island mainly by means of vegetative propagation and human activities.
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Affiliation(s)
- Giuseppe Brundu
- Università degli Studi di Sassari, Dipartimento di Botanica ed Ecologia vegetale, Via Muroni 25, 07100 Sassari, Italy
| | - Renato Lupi
- Università degli Studi di Milano, Dipartimento di Biologia,Via Celoria 26, 20133 Milano, Italy
| | - Ilaria Zapelli
- Università degli Studi di Milano, Dipartimento di Biologia,Via Celoria 26, 20133 Milano, Italy
| | - Tiziana Fossati
- Università degli Studi di Milano, Dipartimento di Biologia,Via Celoria 26, 20133 Milano, Italy
| | - Giuseppe Patrignani
- Università degli Studi di Milano, Dipartimento di Biologia,Via Celoria 26, 20133 Milano, Italy
| | - Ignazio Camarda
- Università degli Studi di Sassari, Dipartimento di Botanica ed Ecologia vegetale, Via Muroni 25, 07100 Sassari, Italy
| | - Francesco Sala
- Università degli Studi di Milano, Dipartimento di Biologia,Via Celoria 26, 20133 Milano, Italy
| | - Stefano Castiglione
- Università degli Studi di Salerno, Dipartimento di Chimica, Via Ponte Don Melillo, 84084 Fisciano (SA), Italy
- For correspondence. E-mail
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Van Loo M, Joseph JA, Heinze B, Fay MF, Lexer C. Clonality and spatial genetic structure in Populus x canescens and its sympatric backcross parent P. alba in a Central European hybrid zone. THE NEW PHYTOLOGIST 2007; 177:506-516. [PMID: 18005320 DOI: 10.1111/j.1469-8137.2007.02266.x] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
Spatial genetic structure (SGS) holds the key to understanding the role of clonality in hybrid persistence, but multilocus SGS in hybrid zones has rarely been quantified. Here, the aim was to fill this gap for natural hybrids between two diploid, ecologically divergent European tree species with mixed sexual/asexual reproduction, Populus alba and P. tremula. Nuclear microsatellites were used to quantify clonality, SGS, and historical gene dispersal distances in up to 407 trees from an extensive Central European hybrid zone including three subpopulation replicates. The focus was on P. x canescens and its backcross parent P. alba, as these two genotypic classes co-occur and interact directly. Sexual recombination in both taxa was more prominent than previously thought, but P. x canescens hybrids tended to build larger clones extending over larger areas than P. alba. The 3.4 times stronger SGS in the P. x canescens genet population was best explained by a combination of interspecific gene flow, assortative mating, and increased clonality in hybrids. Clonality potentially contributes to the maintenance of hybrid zones of P. alba and P. tremula in time and space. Both clonality and SGS need to be taken into account explicitly when designing population genomics studies of locus-specific effects in hybrid zones.
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Affiliation(s)
- Marcela Van Loo
- Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3DS, UK
- Department of Systematics and Evolutionary Botany, Faculty Center Botany, Faculty of Life Sciences, University of Vienna, Rennweg 14, A-1030 Vienna, Austria
| | - Jeffrey A Joseph
- Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3DS, UK
| | - Berthold Heinze
- Department of Genetics, Federal Research Centre for Forestry, Hauptstrasse 7, A-1140 Vienna, Austria
| | - Mike F Fay
- Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3DS, UK
| | - Christian Lexer
- Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3DS, UK
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Hall D, Luquez V, Garcia VM, St Onge KR, Jansson S, Ingvarsson PK. Adaptive population differentiation in phenology across a latitudinal gradient in European aspen (Populus tremula, L.): a comparison of neutral markers, candidate genes and phenotypic traits. Evolution 2007; 61:2849-60. [PMID: 17908247 DOI: 10.1111/j.1558-5646.2007.00230.x] [Citation(s) in RCA: 100] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Abstract
A correct timing of growth cessation and dormancy induction represents a critical ecological and evolutionary trade-off between survival and growth in most forest trees (Rehfeldt et al. 1999; Horvath et al. 2003; Howe et al. 2003). We have studied the deciduous tree European Aspen (Populus tremula) across a latitudinal gradient and compared genetic differentiation in phenology traits with molecular markers. Trees from 12 different areas covering 10 latitudinal degrees were cloned and planted in two common gardens. Several phenology traits showed strong genetic differentiation and clinal variation across the latitudinal gradient, with Q(ST) values generally exceeding 0.5. This is in stark contrast to genetic differentiation at several classes of genetic markers (18 neutral SSRs, 7 SSRs located close to phenology candidate genes and 50 SNPs from five phenology candidate genes) that all showed F(ST) values around 0.015. We thus find strong evidence for adaptive divergence in phenology traits across the latitudinal gradient. However, the strong population structure seen at the quantitative traits is not reflected in underlying candidate genes. This result fit theoretical expectations that suggest that genetic differentiation at candidate loci is better described by F(ST) at neutral loci rather than by Q(ST) at the quantitative traits themselves.
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Affiliation(s)
- David Hall
- Department of Ecology and Environmental Science, Umeå Plant Science Centre, Umeå University, SE-901 87 Umeå, Sweden.
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23
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Foster NL, Baums IB, Mumby PJ. Sexual vs. asexual reproduction in an ecosystem engineer: the massive coral Montastraea annularis. J Anim Ecol 2007; 76:384-91. [PMID: 17302846 DOI: 10.1111/j.1365-2656.2006.01207.x] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
1. Long-lived sedentary organisms with a massive morphology are often assumed to utilize a storage effect whereby the persistence of a small group of adults can maintain the population when sexual recruitment fails. However, employing storage effects could prove catastrophic if, under changing climatic conditions, the time period between favourable conditions becomes so prolonged that the population cannot be sustained solely be sexual recruitment. When a species has multiple reproductive options, a rapidly changing environment may favour alternative asexual means of propagation. 2. Here, we revisit the importance of asexual dispersal in a massive coral subject to severe climate-induced disturbance. Montastraea annularis is a major framework-builder of Caribbean coral reefs but its survival is threatened by the increasing cover of macroalgae that prevents settlement of coral larvae. 3. To estimate levels of asexual recruitment within populations of M. annularis, samples from three sites in Honduras were genotyped using four, polymorphic microsatellite loci. 4. A total of 114 unique genets were identified with 8% consisting of two or more colonies and an exceptionally large genet at the third site comprising 14 colonies. 5. At least 70% of multicolony genets observed were formed by physical breakage, consistent with storm damage. 6. Our results reveal that long-lived massive corals can propagate using asexual methods even though sexual strategies predominate.
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Affiliation(s)
- Nicola L Foster
- Marine Spatial Ecology Laboratory, School of BioSciences, University of Exeter, Prince of Wales Road, Exeter, UK.
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Höltken AM, Gregorius HR. Detecting local establishment strategies of wild cherry (Prunus avium L.). BMC Ecol 2006; 6:13. [PMID: 17020607 PMCID: PMC1609099 DOI: 10.1186/1472-6785-6-13] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2006] [Accepted: 10/04/2006] [Indexed: 11/17/2022] Open
Abstract
Backround P. avium, a pioneer tree species that colonizes early forest successional stages, is assumed to require an effective strategy allowing stably repeatable rounds of local establishment, dispersal and local extinction. Consequently, the early replacement of cherry by climax tree species makes the establishment of several local generations very unlikely, especially in central European continuous cover forests. This has to be seen in connection with the mixed reproduction system involving asexual reproduction as a complementary adaptational strategy. Tests of the local establishment of wild cherry must therefore consider the possibility of first generation establishment via seedling recruitment potentially followed by an asexual generation (root suckering). Successful establishment can therefore be determined only among adult individuals with the option of detecting vegetative reproduction at these stages. To test the implied suggestion about local establishment strategies of wild cherry, nuclear microsatellites were used to analyse patterns of asexual propagation among adult stages that have been subjected to one of two major types of forest management. These management types, the historical "coppice with standards system" (CWS) and the "high forest system" (HFS), can be reasonably assumed to have affected the reproduction system of P. avium. Results Clear differences were found in the reproduction pattern between two stands representing the two forest management types: 1) Clonal propagation is observed in both management systems, but with a distinctly higher frequency in the CWS. Hence, sexual recruitment as a first local generation is followed by a second asexual generation in both, whereas in the CWS there is evidence for an additional clonal generation. 2) The estimation of amounts of clonal reproduction critically depends on the assumptions about multilocus gene associations. This is revealed by the application of newly developed methods of quantifying gene associations. 3) Haplotype diversities are higher in the CWS and found to be associated with a large degree of heterozygosity for the second largest clonal group. 4) Seed set was sparse over the last eight years of observation in the CWS stand. Conclusion This study provides useful guidelines for more comprehensive investigations, particularly on the interrelationships between degrees of cloning and capacity of sexual reproduction, amounts of multilocus gene associations, effects of heterozygosity on cloning success, and sustainability of different forest management types.
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Affiliation(s)
- Aki M Höltken
- Institut für Forstgenetik und Forstpflanzenzüchtung, Büsgenweg 2, 37077 Göttingen, Germany
| | - Hans-Rolf Gregorius
- Institut für Forstgenetik und Forstpflanzenzüchtung, Büsgenweg 2, 37077 Göttingen, Germany
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25
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Stoeckel S, Grange J, Fernández-Manjarres JF, Bilger I, Frascaria-Lacoste N, Mariette S. Heterozygote excess in a self-incompatible and partially clonal forest tree species -- Prunus avium L. Mol Ecol 2006; 15:2109-18. [PMID: 16780428 DOI: 10.1111/j.1365-294x.2006.02926.x] [Citation(s) in RCA: 103] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Abstract
Wild cherry (Prunus avium L.), a partially asexual self-incompatible forest tree, shows heterozygote excess, which is a poorly studied phenomenon. In three natural populations, we found significant heterozygote excess at almost all investigated loci (eight microsatellites and markers for the self-incompatibility locus). We examined four hypotheses to account for this observed heterozygote excess. First, negative F(IS) can result from a lack of selfed progeny in small populations of outcrossing species. A second explanation for negative F(IS) is selection during the life cycle of the most heterozygous individuals. A third explanation is negative assortative mating when reproduction occurs between individuals bearing phenotypes more dissimilar than by chance. The last explanation for negative F(IS) relies on asexual reproduction. Expectations for each hypothesis were tested using empirical data. Patterns of F(IS) differed among loci. Nevertheless, our experimental results did not confirm the small sample size hypothesis. Although one locus is probably under a hitch-hiking effect from the SI locus, we rejected the effect of the self-incompatibility locus for the genome as a whole. Similarly, although one locus showed a clear pattern consistent with the selection of heterozygous individuals, the heterosis effect over the whole genome was rejected. Finally, our results revealed that clonality probably explains significant negative F(IS) in wild cherry populations when considering all individuals. More theoretical effort is needed to develop expectations and hypotheses, and test them in the case of species combining self-incompatibility and partially asexual reproduction.
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Affiliation(s)
- Solenn Stoeckel
- Cemagref, Unité de Recherche 'Ecosystèmes Forestiers', Domaine des Barres, 45290 Nogent-sur-Vernisson, France.
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