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Cadena-Caballero CE, Munive-Argüelles N, Vera-Cala LM, Barrios-Hernandez C, Duarte-Bernal RO, Ayus-Ortiz VL, Pardo-Díaz LA, Agudelo-Rodríguez M, Bautista-Rozo LX, Jimenez-Gutierrez LR, Martinez-Perez F. APGW/AKH Precursor from Rotifer Brachionus plicatilis and the DNA Loss Model Explain Evolutionary Trends of the Neuropeptide LWamide, APGWamide, RPCH, AKH, ACP, CRZ, and GnRH Families. J Mol Evol 2023; 91:882-896. [PMID: 38102415 PMCID: PMC10730642 DOI: 10.1007/s00239-023-10146-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2023] [Accepted: 11/11/2023] [Indexed: 12/17/2023]
Abstract
In the year 2002, DNA loss model (DNA-LM) postulated that neuropeptide genes to emerged through codons loss via the repair of damaged DNA from ancestral gene namely Neuropeptide Precursor Predictive (NPP), which organization correspond two or more neuropeptides precursors evolutive related. The DNA-LM was elaborated according to amino acids homology among LWamide, APGWamide, red pigment-concentrating hormone (RPCH), adipokinetic hormones (AKHs) and in silico APGW/RPCH NPPAPGW/AKH NPP were proposed. With the above principle, it was proposed the evolution of corazonin (CRZ), gonadotropin-releasing hormone (GnRH), AKH, and AKH/CRZ (ACP), but any NPP never was considered. However, the evolutive relation via DNA-LM among these neuropeptides precursors not has been established yet. Therefore, the transcriptomes from crabs Callinectes toxotes and Callinectes arcuatus were used to characterized ACP and partial CRZ precursors, respectively. BLAST alignment with APGW/RPCH NPP and APGW/AKH NPP allow identified similar NPP in the rotifer Brachionus plicatilis and other invertebrates. Moreover, three bioinformatics algorithms and manual verification were used to purify 13,778 sequences, generating a database with 719 neuropeptide precursors. Phylogenetic trees with the DNA-LM parameters showed that some ACP, CRZ, AKH2 and two NPP share nodes with GnRH from vertebrates and some of this neuropeptide had nodes in invertebrates. Whereas the phylogenetic tree with standard parameters do not showed previous node pattern. Robinson-Foulds metric corroborates the differences among phylogenetic trees. Homology relationship showed four putative orthogroups; AKH4, CRZ, and protostomes GnRH had individual group. This is the first demonstration of NPP in species and would explain the evolution neuropeptide families by the DNA-LM.
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Affiliation(s)
- Cristian E Cadena-Caballero
- Grupo de Investigación Computo Avanzado y a Gran Escala (CAGE), Escuela de Ingeniería de Sistemas e Informática, Universidad Industrial de Santander, 680002, Bucaramanga, Colombia
| | - Nestor Munive-Argüelles
- Grupo de Investigación Computo Avanzado y a Gran Escala (CAGE), Escuela de Ingeniería de Sistemas e Informática, Universidad Industrial de Santander, 680002, Bucaramanga, Colombia
| | - Lina M Vera-Cala
- Grupo de Investigación en Demografía, Salud Pública y Sistemas de Salud (GUINDESS), Departamento de Salud Pública, Universidad Industrial de Santander, 680002, Bucaramanga, Colombia
| | - Carlos Barrios-Hernandez
- Grupo de Investigación Computo Avanzado y a Gran Escala (CAGE), Escuela de Ingeniería de Sistemas e Informática, Universidad Industrial de Santander, 680002, Bucaramanga, Colombia
| | - Ruben O Duarte-Bernal
- Biomedical Imaging, Vision and Learning Laboratory (BIVL2ab), Escuela de Ingeniería de Sistemas e Informática, Universidad Industrial de Santander, 680002, Bucaramanga, Colombia
| | - Viviana L Ayus-Ortiz
- Grupo de Investigación Computo Avanzado y a Gran Escala (CAGE), Escuela de Ingeniería de Sistemas e Informática, Universidad Industrial de Santander, 680002, Bucaramanga, Colombia
| | - Luis A Pardo-Díaz
- Grupo de Investigación Computo Avanzado y a Gran Escala (CAGE), Escuela de Ingeniería de Sistemas e Informática, Universidad Industrial de Santander, 680002, Bucaramanga, Colombia
| | - Mayra Agudelo-Rodríguez
- Grupo de Investigación Computo Avanzado y a Gran Escala (CAGE), Escuela de Ingeniería de Sistemas e Informática, Universidad Industrial de Santander, 680002, Bucaramanga, Colombia
| | - Lola X Bautista-Rozo
- Biomedical Imaging, Vision and Learning Laboratory (BIVL2ab), Escuela de Ingeniería de Sistemas e Informática, Universidad Industrial de Santander, 680002, Bucaramanga, Colombia
| | - Laura R Jimenez-Gutierrez
- Facultad de Ciencias del Mar, Universidad Autónoma de Sinaloa, 82000, Mazatlán, México
- Cátedra-CONAHCyT, Consejo Nacional de Humanidades Ciencias y Tecnología, 03940, CDMX, México
| | - Francisco Martinez-Perez
- Grupo de Investigación Computo Avanzado y a Gran Escala (CAGE), Escuela de Ingeniería de Sistemas e Informática, Universidad Industrial de Santander, 680002, Bucaramanga, Colombia.
- Laboratorio de Genómica Celular Aplicada (LGCA), Grupo de Microbiología y Genética, Escuela de Biología, Universidad Industrial de Santander, 680002, Bucaramanga, Colombia.
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Sakai T, Shiraishi A, Kawada T, Matsubara S, Aoyama M, Satake H. Invertebrate Gonadotropin-Releasing Hormone-Related Peptides and Their Receptors: An Update. Front Endocrinol (Lausanne) 2017; 8:217. [PMID: 28932208 PMCID: PMC5592718 DOI: 10.3389/fendo.2017.00217] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/23/2017] [Accepted: 08/14/2017] [Indexed: 12/16/2022] Open
Abstract
Gonadotropin-releasing hormones (GnRHs) play pivotal roles in reproductive functions via the hypothalamus, pituitary, and gonad axis, namely, HPG axis in vertebrates. GnRHs and their receptors (GnRHRs) are likely to be conserved in invertebrate deuterostomes and lophotrochozoans. All vertebrate and urochordate GnRHs are composed of 10 amino acids, whereas protostome, echinoderm, and amphioxus GnRH-like peptides are 11- or 12-residue peptide containing two amino acids after an N-terminal pyro-Glu. In urochordates, Halocynthia roretzi GnRH gene encodes two GnRH peptide sequences, whereas two GnRH genes encode three different GnRH peptides in Ciona intestinalis. These findings indicate the species-specific diversification of GnRHs. Intriguingly, the major signaling pathway for GnRHRs is intracellular Ca2+ mobilization in chordates, echinoderms, and protostomes, whereas Ciona GnRHRs (Ci-GnRHRs) are endowed with multiple GnRHergic cAMP production pathways in a ligand-selective manner. Moreover, the ligand-specific modulation of signal transduction via heterodimerization among Ci-GnRHR paralogs suggests the species-specific development of fine-tuning of gonadal functions in ascidians. Echinoderm GnRH-like peptides show high sequence differences compared to those of protostome counterparts, leading to the difficulty in classification of peptides and receptors. These findings also show both the diversity and conservation of GnRH signaling systems in invertebrates. The lack of the HPG axis in invertebrates indicates that biological functions of GnRHs are not release of gonadotropins in current invertebrates and common ancestors of vertebrates and invertebrates. To date, authentic or putative GnRHRs have been characterized from various echinoderms and protostomes as well as chordates and the mRNAs have been found to be distributed not only reproductive organs but also other tissues. Collectively, these findings further support the notion that invertebrate GnRHs have biological roles other than the regulation of reproductive functions. Moreover, recent molecular phylogenetic analysis suggests that adipokinetic hormone (AKH), corazonin (CRZ), and AKH/CRZ-related peptide (ACP) belong to the GnRH superfamily but has led to the different classifications of these peptides and receptors using different datasets including the number of sequences and structural domains. In this review, we provide current knowledge of, and perspectives in, molecular basis and evolutionary aspects of the GnRH, AKH, CRZ, and ACP.
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Affiliation(s)
- Tsubasa Sakai
- Bioorganic Research Institute, Suntory Foundation for Life Sciences, Kyoto, Japan
| | - Akira Shiraishi
- Bioorganic Research Institute, Suntory Foundation for Life Sciences, Kyoto, Japan
| | - Tsuyoshi Kawada
- Bioorganic Research Institute, Suntory Foundation for Life Sciences, Kyoto, Japan
| | - Shin Matsubara
- Bioorganic Research Institute, Suntory Foundation for Life Sciences, Kyoto, Japan
| | - Masato Aoyama
- Faculty of Science, Department of Biological Sciences, Nara Women’s University, Nara, Japan
| | - Honoo Satake
- Bioorganic Research Institute, Suntory Foundation for Life Sciences, Kyoto, Japan
- *Correspondence: Honoo Satake,
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Rao KR, Riehm JP, Zahnow CA, Kleinholz LH, Tarr GE, Johnson L, Norton S, Landau M, Semmes OJ, Sattelberg RM, Jorenby WH, Hintz MF. Characterization of a pigment-dispersing hormone in eyestalks of the fiddler crab Uca pugilator. Proc Natl Acad Sci U S A 2010; 82:5319-22. [PMID: 16593589 PMCID: PMC390559 DOI: 10.1073/pnas.82.16.5319] [Citation(s) in RCA: 62] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
A pigment-dispersing hormone (PDH) from eyestalks of the fiddler crab Uca pugilator has been purified by gel filtration, ion-exchange chromatography, partition chromatography, and reversed-phase liquid chromatography. Based on automated gas-phase sequencing and subsequent identification of carboxyl-terminal amide, we have assigned the primary structure of this peptide as Asn-Ser-Glu-Leu-Ile-Asn-Ser-Ile-Leu-Gly-Leu-Pro-Lys-Val-Met-Asn-Asp-Ala-NH (2). We have confirmed the sequence by synthesizing this peptide and demonstrating that the synthetic PDH and the native PDH display identical chromatographic behavior and biological activity. This hormone is a member of a family of invertebrate neuropeptides that includes a light-adapting/pigment-dispersing octadecapeptide hormone from the prawn Pandalus borealis. In assays for melanophore pigment dispersion in destalked fiddler crabs, Uca PDH was 21-fold more potent than Pandalus PDH. These two hormones share a hexapeptide core sequence (residues 5-10: -Ile-Asn-Ser-Ile-Leu-Gly-) as well as the amino- and carboxyl-terminal residues but differ at positions 3, 4, 11, 13, 16, and 17. These results point to speciesrelated or group-specific structural differences among crustacean PDHs.
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Affiliation(s)
- K R Rao
- Department of Biology, The University of West Florida, Pensacola, FL 32514
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RIEHM JOHNP, RAO KRANGA. Synthesis and assay of tyrosinated analogs of a crustacean pigment-dispersing neuropeptide hormone. ACTA ACUST UNITED AC 2009. [DOI: 10.1111/j.1399-3011.1987.tb02268.x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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5
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Structure, Function and Mode of Action of Select Arthropod Neuropeptides. STUDIES IN NATURAL PRODUCTS CHEMISTRY 2006. [DOI: 10.1016/s1572-5995(06)80026-8] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Britto ALM, Josefsson L, Scemes E, Visconti MA, Castrucci AMDL. Ionic requirements for PCH-induced pigment aggregation in the freshwater shrimp, Macrobrachium potiuna, erythrophores. ACTA ACUST UNITED AC 1996. [DOI: 10.1016/0300-9629(95)02075-6] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Affiliation(s)
- K R Rao
- Department of Cellular and Molecular Biology, University of West Florida, Pensacola 32514-5751
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McCallum ML, Rao KR, Riehm JP, Mohrherr CJ, Morgan WT. Primary structure and relative potency of an analog of beta-PDH (pigment-dispersing hormone) from the crayfish Procambarus clarkii. PIGMENT CELL RESEARCH 1991; 4:201-8. [PMID: 1823925 DOI: 10.1111/j.1600-0749.1991.tb00441.x] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
A pigment-dispersing hormone (PDH) from eyestalks of the crayfish Procambarus clarkii was purified by gel filtration, cation-exchange chromatography, partition chromatography, and reversed-phase HPLC. Based on automated sequencing and by the identical chromatographic behavior of the native PDH and the synthetic amidated form of the deduced sequence, the primary structure of Procambarus PDH has been established as: Asn-Ser-Glu-Leu-Ile-Asn-Ser-Ile-Leu-Gly-Leu-Pro-Lys-Val-Met-Asn-Glu-Ala- NH2. This peptide differs from beta-PDH of the fiddler crab Uca pugilator at a single position, Glu17 in place of Asp17. Because of this substitution, Procambarus PDH was 4 to 7-fold less potent than beta-PDH in causing pigment dispersion in the erythrophores, leucophores, and melanophores of Uca. In contrast, Procambarus PDH was 4-fold more potent than beta-PDH in eliciting pigment dispersion in the erythrophores of Procambarus. These peptides displayed less marked differences in potency in triggering leucophore pigment dispersion and light-adaptational distal eye pigment movement in Procambarus. These findings indicate that the structural requirements for PDH-receptor interactions vary with the species and with the target cell type within a given species.
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Affiliation(s)
- M L McCallum
- Department of Biology, University of West Florida, Pensacola 32514-5751
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Prestwich GD, Bruce MJ, Chang ES. Binding proteins for a peptide hormone in the shrimp, Sicyonia ingentis: evidence from photoaffinity labeling with red pigment concentrating hormone analogs. Gen Comp Endocrinol 1991; 83:473-80. [PMID: 1657692 DOI: 10.1016/0016-6480(91)90155-y] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Two photoaffinity analogs of the crustacean erythrophore (red pigment) concentrating hormone (RPCH) have been synthesized and shown to cause pigment concentration in the shrimp Sicyonia ingentis. These two modified oligopeptides have azidosalicylamide groups which allow introduction of an 125I label and enable photochemically induced covalent attachment to a specific binding site. Incubation of [125I]-ASA-Glu1-CC-2 with the 100,000g membrane pellet and cytosol fraction from epidermis, eyestalks, muscle, and central nervous system (CNS), followed by irradiation, sodium dodecyl sulfate-polyacrylamide gel electrophoresis, and autoradiography results in covalent modification of certain protein bands in the membranes of selected tissues. Two such proteins were observed in neural tissues and showed competitive displacement by excess RPCH, indicative of specific high-affinity binding. This is the first report of peptide hormone-binding proteins in an invertebrate and provides further evidence of a role for RPCH as a neurotransmitter in the CNS.
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Affiliation(s)
- G D Prestwich
- Bodega Marine Laboratory, University of California 94923
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Britto AL, Castrucci AM, Visconti MA, Josefsson L. Quantitative in vitro assay for crustacean chromatophorotropins and other pigment cell agonists. PIGMENT CELL RESEARCH 1990; 3:28-32. [PMID: 2115999 DOI: 10.1111/j.1600-0749.1990.tb00258.x] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
An in vitro crustacean (freshwater shrimp, Macrobrachium potiuna) erythrophore bioassay for chromatophorotropins and other pigment cell agonists is described. The present assay is a quantitative method that determines the pigment responses with the aid of an ocular micrometer. The pigment granules within the erythrophores are dispersed out into the dendritic processes of the cells when the isolated carapace is placed in physiological solution. This bioassay provides, therefore, a method for measuring the response of the pigment cells to aggregating agents such as pigment concentrating hormone (PCH). This bioassay is sensitive to PCH at a concentration as low as 3 x 10(-12) M. Calcium ionophore A23187 mimics the actions of PCH, but, unlike the hormone, the ionophore-induced pigment aggregation is irreversible after physiological solution rinses. Therefore, chromatophorotropic activities of pigment dispersing agents, such as pigment dispersing hormones (PDH), can be determined on ionophore-treated erythrophores. The potencies of alpha-PDH and beta-PDH show a threefold difference (not significant). Because of its convenience and its ability to make an objective determination of the bidirectional pigment movements within erythrophores, this bioassay is a suitable method for further structure-activity studies of the various chromatophorotropins and their analogs.
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Affiliation(s)
- A L Britto
- Departamento de Fisiologia Geral, Universidade de São Paulo, Brasil
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Abstract
This report summarizes recent work on the chemistry and structure-activity relationships of crustacean chromatophorotropic pigment-dispersing hormones (PDHs) and the identification of structurally related peptides from insects. So far, the primary structures of crustacean alpha-PDH and beta-PDH and of a pigment-dispersing factor (PDF) from the grasshopper Romalea microptera have been deduced. Additionally, 17 of the 18 residues of a PDF from the cricket Acheta domesticus were identified. In the PDH/PDF family, the chain length (18 residues), terminal residues (N-terminal Asn and C-terminal Ala-NH2), and at least 50% of the amino acid sequence appear to be conserved. The functions of these peptides in insects are unknown. Detailed studies of structure-activity relationships of crustacean PDHs have been conducted, leading to the tentative identification of the message sequence, preparation of hyperpotent oxidation-resistant analogs, and synthesis of bioactive tyrosinated analogs for radioiodination. Antisera were raised against PDHs, and immunoreactive soma and fibers have been localized in the crustacean eyestalk neurosecretory system. This progress is expected to stimulate more intensive research on the PDH family.
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Affiliation(s)
- K R Rao
- Department of Biology, University of West Florida, Pensacola 32514-5751
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Greenberg MJ, Rao KR, Lehman HK, Price DA, Doble KE. Cross-phyletic bioactivity of arthropod neurohormones and molluscan ganglion extracts: evidence of an extended peptide family. THE JOURNAL OF EXPERIMENTAL ZOOLOGY 1985; 233:337-46. [PMID: 3882880 DOI: 10.1002/jez.1402330302] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Two structurally related arthropod neuropeptides, red pigment concentrating hormone (RPCH) and adipokinetic hormone (AKH), are potent excitors of the heart of the clam Mercenaria mercenaria. The response is bimodal: whereas the threshold for affected hearts is 1-3 X 10(-9) M, about 40% of the preparations are virtually unresponsive. Aqueous extracts of Mercenaria ganglia contain a substance which concentrates the red pigment in the erythrophores of intact destalked Uca pugilator and even of its isolated legs. This substance is retained on Sephadex G-15 and co-elutes with synthetic shrimp RPCH. The active fractions also concentrate the erythrophores and the leucophores of destalked shrimp (Penaeus). Neither dopamine nor the molluscan neuropeptide FMRFamide had any chromatophorotropic effect in these assays. The activity of the ganglion extracts was abolished by digestion with chymotrypsin. In conclusion, molluscan ganglion extracts contain a peptide factor, possibly an analog of RPCH, that concentrates the pigments of crustacean chromatophores by a direct action on the cells.
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Biegniewska A, Skorkowski E, Kleinholz L. Lack of white pigment concentrating hormone in the eyestalk of the crab, cancer magister. ACTA ACUST UNITED AC 1985. [DOI: 10.1016/0300-9629(85)90548-1] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Yamashiro D, Applebaum SW, Li CH. Synthesis of shrimp red pigment-concentrating hormone analogs and their biological activity in locusts. INTERNATIONAL JOURNAL OF PEPTIDE AND PROTEIN RESEARCH 1984; 23:39-41. [PMID: 6698714 DOI: 10.1111/j.1399-3011.1984.tb02689.x] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
Two analogs of the red pigment-concentrating hormone (RPCH) have been synthesized by the solid-phase method: [Thr6]-RPCH (I) and [Tyr4, Thr6]-RCPH (II). Analog I has the same amino acid composition as the second adipokinetic hormone (AKH-II) isolated from locust corpora cardiaca. Bioassay for lipid-mobilizing activity in adult male locusts gave the following increases in hemolymph lipid content: AKH-I, 3.5; I, 2.4; II, 2.9. The biological response shown by I lends support to the conclusion that its sequence is that of the presumptive AKH-II. Replacement of Phe in position 4 by Tyr does not reduce the adipokinetic response.
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