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Pensini E, Meszaros P, Kashlan N, Marangoni AG, Laredo T, Gregori S, Ghazani SM, van der Zalm J, Chen A. Ferroelectric hydrogels from amino acids and oleic acid. iScience 2024; 27:110601. [PMID: 39280610 PMCID: PMC11396064 DOI: 10.1016/j.isci.2024.110601] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2024] [Revised: 07/10/2024] [Accepted: 07/25/2024] [Indexed: 09/18/2024] Open
Abstract
Ferroelectric bio-based materials with a high water content (≈90 wt %) were not previously developed. Here, we develop hydrogels containing ≈90 wt % water, amino acids (lysine and arginine) and oleic acid. The NH and CH groups of lysine hydrogen bond water, as shown by attenuated total reflectance-Fourier transform infrared spectroscopy, yielding electrically conductive solutions. Lysine also interacts with oleic acid, yielding hard materials with a lamellar crystal structure, as revealed by synchrotron small angle X-ray scattering. Polarized light microscopy and shear rheology show that aqueous mixtures of amino acids and oleic acid are birefringent gels. These gels have a columnar, hexagonal crystal structure with 54-85 wt % water, and a bi-continuous sponge crystal structure with 89 wt % water. They are piezoelectric, as demonstrated by cyclic voltammetry. Thus, they deform and undergo crystalline phase transitions when exposed to electric fields. The piezoelectric materials developed can find use in medical applications and clean energy harvesting.
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Affiliation(s)
- Erica Pensini
- School of Engineering, University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada
- Biophysics Interdepartmental Group (BIG), University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada
| | - Peter Meszaros
- School of Engineering, University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada
| | - Nour Kashlan
- School of Engineering, University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada
| | - Alejandro G Marangoni
- Biophysics Interdepartmental Group (BIG), University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada
- Food Science Department, University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada
| | - Thamara Laredo
- Chemistry Department, Lakehead University, 500 University Avenue, Orillia, ON L3V 0B9, Canada
| | - Stefano Gregori
- School of Engineering, University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada
| | - Saeed Mirzaee Ghazani
- Food Science Department, University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada
| | - Joshua van der Zalm
- Chemistry Department, University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada
| | - Aicheng Chen
- Chemistry Department, University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada
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Görbitz CH. Crystal structures of amino acids: from bond lengths in glycine to metal complexes and high-pressure polymorphs. CRYSTALLOGR REV 2015. [DOI: 10.1080/0889311x.2014.964229] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Williams PA, Hughes CE, Harris KDM. L-Lysine: Exploiting Powder X-ray Diffraction to Complete the Set of Crystal Structures of the 20 Directly Encoded Proteinogenic Amino Acids. Angew Chem Int Ed Engl 2015; 54:3973-7. [DOI: 10.1002/anie.201411520] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2014] [Indexed: 11/07/2022]
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Williams PA, Hughes CE, Harris KDM. L-Lysine: Exploiting Powder X-ray Diffraction to Complete the Set of Crystal Structures of the 20 Directly Encoded Proteinogenic Amino Acids. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201411520] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Tilborg A, Norberg B, Wouters J. Pharmaceutical salts and cocrystals involving amino acids: a brief structural overview of the state-of-art. Eur J Med Chem 2014; 74:411-26. [PMID: 24487190 DOI: 10.1016/j.ejmech.2013.11.045] [Citation(s) in RCA: 61] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2013] [Revised: 11/22/2013] [Accepted: 11/27/2013] [Indexed: 10/25/2022]
Abstract
Salification of new drug substances in order to improve physico-chemical or solid-state properties (e.g. dissolution rate or solubility, appropriate workup process, storage for further industrial and marketing development) is a well-accepted procedure. Amino acids, like aspartic acid, lysine or arginine take a great part in this process and are implicated in several different formulations of therapeutic agent families, including antibiotics (amoxicillin from beta lactam class or cephalexin from cephalosporin class), NSAIDs (ketoprofen, ibuprofen and naproxen from profen family, acetylsalicylic acid) or antiarrhythmic agents (e.g. ajmaline). Even if more than a half of known pharmaceutical molecules possess a salifiable moiety, what can be done for new potential drug entity that cannot be improved by transformation into a salt? In this context, after a brief review of pharmaceutical salts on the market and the implication of amino acids in these formulations, we focus on the advantage of using amino acids even when the target compound is not salifiable by exploiting their zwitterionic potentialities for cocrystal edification. We summarize here a series of new examples coming from literature to support the advantages of broadening the application of amino acids in formulation for new drug substances improvement research for non-salifiable molecules.
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Affiliation(s)
- Anaëlle Tilborg
- Unité de Chimie Physique Théorique et Structurale, Dept. Chemistry, University of Namur, 61, Rue de Bruxelles, B-5000 Namur, Belgium.
| | - Bernadette Norberg
- Unité de Chimie Physique Théorique et Structurale, Dept. Chemistry, University of Namur, 61, Rue de Bruxelles, B-5000 Namur, Belgium.
| | - Johan Wouters
- Unité de Chimie Physique Théorique et Structurale, Dept. Chemistry, University of Namur, 61, Rue de Bruxelles, B-5000 Namur, Belgium.
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Environment-induced stabilization of hydrogen-bonded dimers in crystal of lysine (5-methyl-1H-[1,2,4]triazol-3ylsulfanyl)-acetate. Struct Chem 2011. [DOI: 10.1007/s11224-011-9893-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/15/2022]
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PRASAD GSRIDHAR, VIJAYAN M. X-ray studies on crystalline complexes involving amino acids and peptides. ACTA ACUST UNITED AC 2009. [DOI: 10.1111/j.1399-3011.1990.tb00061.x] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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SURESH STEPHEN, PRASAD GSRIDHAR, VIJAYAN M. X-Ray studies on crystalline complexes involving a mino acids and peptides. ACTA ACUST UNITED AC 2009. [DOI: 10.1111/j.1399-3011.1994.tb00514.x] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Venkatasubramanian K, Suresh E. THE CRYSTAL AND MOLECULAR STRUCTURE OF DIAQUABIS(L-LYSINO)NICKEL(II) DICHLORIDE MONOHYDRATE. J COORD CHEM 2006. [DOI: 10.1080/00958979308037428] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Ravishankar R, Chandra NR, Vijayan M. X-ray studies on crystalline complexes involving amino acids and peptides XXXIV. Novel mode of aggregation, interaction patterns and chiral effects in the maleic acid complexes of DL- and L- arginine. J Biomol Struct Dyn 1998; 15:1093-100. [PMID: 9669554 DOI: 10.1080/07391102.1998.10509003] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
Amino acid - carboxylic acid complexes provide useful information in relation to molecular interactions in present day biological systems and to prebiotic self-organisation. The crystal structures of the complexes of maleic acid with DL- arginine (orthorhombic; Pca2(1); a=15.9829, b=5.4127, c=16.1885; R=0.0522 for 956 reflections) and L- arginine (triclinic; P1; a=5.2641, b=8.0388, c=9.7860, alpha=106.197, beta=97.275, gamma=101.64; R=0.039 for 1749 reflections) have been determined. The complexes are made up of positively charged zwitterionic arginine molecules and negatively charged semi-maleate ions which contain an intramolecular symmetric O-H-O hydrogen bond. In both the structures, the amino acid molecules aggregate into layers. In each layer, S2 head-to-tail sequences are interconnected through specific intermolecular interactions between alpha-carboxylate and guanidyl groups, an arrangement observed for the first time in crystal structures involving arginine. The carboxylate-guanidyl interactions are of different types in the two complexes and consequently aggregation patterns in them exhibit substantial differences. Interactions between the amino acid layers involve the semi-maleate ions in both the complexes. In addition, water-bridges also exist in the L complex. The full potential of the guanidyl group for specific interactions is realized in both the structures. The L complex contains an array of water-mediated salt bridges. The structures demonstrate that the effect of chirality on molecular aggregation can span a wide range.
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Affiliation(s)
- R Ravishankar
- Molecular Biophysics Unit, Indian Institute of Science, Bangalore
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Venkatraman J, Prabu MM, Vijayan M. X-ray studies on crystalline complexes involving amino acids and peptides. XXXII. Effect of chirality on ionisation state, stoichiometry and aggregation in the complexes of oxalic acid with DL- and L-lysine. THE JOURNAL OF PEPTIDE RESEARCH : OFFICIAL JOURNAL OF THE AMERICAN PEPTIDE SOCIETY 1997; 50:77-87. [PMID: 9273891 DOI: 10.1111/j.1399-3011.1997.tb01172.x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
Crystals of the oxalic acid complex of DL-lysine (triclinic P1; a = 5.540(1), b = 10.764(2), c = 12.056(2) A, alpha = 77.8(1), beta = 80.6(1), gamma = 75.6(1).; R = 4.7% for 2023 observed reflections) contain lysine and semioxalate ions in the 1:1 ratio, whereas the ratio of lysine and semioxalate/oxalate ions is 2:3 in the crystals of the L-lysine complex (monoclinic P2(1); alpha = 4.906(1), b = 20.145(4), c = 12.455(1) A, beta = 92.5(1).; R = 4.4% for 1494 observed reflections). The amino acid molecule in the L-lysine complex has an unusual ionisation state with positively charged alpha- and side-chain amino groups and a neutral carboxyl group. The unlike molecules aggregate into separate alternating layers in the DL-lysine complex in a manner similar to that observed in several of the amino acid complexes. The L-lysine complex exhibits a new aggregation pattern which cannot be easily explained in terms of planar features, thus emphasizing the fundamental dependence of aggregation on molecular characteristics. Despite the differences in stoichiometry, ionisation state and long-range aggregation patterns, the basic element of aggregation in the two complexes exhibits considerable similarity.
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Affiliation(s)
- J Venkatraman
- Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India
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Suresh S, Vijayan M. Variability in ionization state, stoichiometry and aggregation in histidine complexes with formic acid. J Biosci 1995. [DOI: 10.1007/bf02703270] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Chakrabarti P. Conformations of arginine and lysine side chains in association with anions. INTERNATIONAL JOURNAL OF PEPTIDE AND PROTEIN RESEARCH 1994; 43:284-91. [PMID: 8005751 DOI: 10.1111/j.1399-3011.1994.tb00392.x] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
The side chain conformations shown by arginine and lysine in amino-acid and peptide crystal structures and bound to oxyanions in proteins have been analyzed in an attempt to understand the behaviour of these long-chain amino acids in an ionic environment. Except for chi 1, torsions have a preference for the trans conformation. However, for arginine in protein structures, chi 3 and chi 4 appear to be flexible and can be tuned for optimal anion binding. For chi 4, values in the range -80 to 80 degrees are excluded for steric reasons; the remaining region in conformational space is accessible. This orientational variety exhibited by chi 4 has not been hitherto appreciated. Factors that can forbid a chi-angle to be in the trans geometry are the simultaneous binding of the anion by the main- and side-chain atoms, or the sharing of the anion between two different molecules in the crystal structure. Small molecules containing arginine have a distinct tendency to crystallize with two molecules in the asymmetric unit. This may be a general phenomenon for all extended molecules which have hydrogen-bond donors (or acceptors) embedded in a rigid set-up.
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Affiliation(s)
- P Chakrabarti
- Physical Chemistry Division, National Chemical Laboratory, Pune, India
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Venkatasubramanian K, Suresh E. THE CRYSTAL AND MOLECULAR STRUCTURE OF DIAQUABIS(L-LYSINO)NICKEL(II) DICHLORIDE MONOHYDRATE. J COORD CHEM 1993. [DOI: 10.1080/00958979308045669] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Prasad GS, Vijayan M. X-ray studies on crystalline complexes involving amino acids and peptides. XXIV. Different ionization states and novel aggregation patterns in the complexes of succinic acid withDL-andL-histidine. Biopolymers 1993. [DOI: 10.1002/bip.360330210] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Soman J, Vijayan M, Ramakrishnan B, Row TNG. X-Ray studies on crystalline complexes involving amino acids and peptides. XVII. Chirality and molecular aggregation: The crystal structures ofDL-arginineDL-glutamate monohydrate andDL-arginineDL-aspartate. Biopolymers 1990. [DOI: 10.1002/bip.360290308] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Cserháti T, Szögyi M. Interactions between proteins, peptides and amino acids. New advances 1986-1989. DIE NAHRUNG 1990; 34:803-10. [PMID: 2267006 DOI: 10.1002/food.19900340908] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
The paper deals with the recent achievements in the study of the various interactions between proteins, peptides and amino acids. The interactions are classified according to the hydrophilic, hydrophobic or mixed character of the interactive forces. The effect of the interaction on protein (peptide) association, structure and biological activity as well as the role of individual amino acid residues in the hydrophobic and hydrophilic interactions are discussed.
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Affiliation(s)
- T Cserháti
- Central Research Institute for Chemistry, Hungarian Academy of Sciences, Budapest
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Soman J, Rao T, Radhakrishnan R, Vijayan M. X-ray studies on crystalline complexes involving amino acids and peptides. Part XX. Crystal structures of DL-arginine acetate monohydrate and DL-lysine acetate and a comparison with the corresponding L-amino acid complexes. J Biomol Struct Dyn 1989; 7:269-77. [PMID: 2513839 DOI: 10.1080/07391102.1989.10507770] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
Crystals of DL-arginine acetate monohydrate, C6H15N4O2+C2H3O2-.H2O, are monoclinic, P2(1)/c, with a = 13.552(2), b = 5.048(2), c = 18.837(3) A, beta = 101.34(2) degrees and Z = 4, and those of DL-lysine acetate, C6H15N2O2+.C2H3O2- are triclinic, P1, with a = 5.471(2), b = 7.656(2), c = 12.841(2) A, alpha = 94.48(1), beta = 94.59(2), gamma = 98.83(2) degrees and Z = 2. The structures have been solved by direct methods and refined to R = 0.058 and 0.077 for 1522 and 1259 observed reflections respectively. The difference in the number and the nature of proton donors leads to a difference in hydrogen bond density in the two structures. The basic elements of aggregation in both the structures are pairs of amino acid molecules, each pair stabilized by two centrosymmetrically related hydrogen bonds involving alpha-amino and alpha-carboxylate groups, stacked along the shortest dimension to form columns. The pairs are held together in each column by head-to-tail sequences. The columns stack along a crystallographic axis to form layers. Adjacent layers are bridged by acetate ions. The amino acid-acetate interactions are primarily through side chains and involve specific interactions and characteristic interaction patterns. The gross features of molecular aggregation are nearly the same in DL-arginine acetate monohydrate and L-arginine acetate whereas they are substantially different in the lysine complexes. In both cases, one of the two head-to-tail sequences in the L complex is replaced by a hydrogen bonded loop involving alpha-amino and alpha-carboxylate groups, in the DL complex. This may have implications for prebiotic condensation during chemical evolution.
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Affiliation(s)
- J Soman
- Molecular Biophysics Unit, Indian Institute of Science, Bangalore
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Soman J, Vijayan M. X-ray studies on crystalline complexes involving amino acids and peptides: Part XVIII. Crystal structure of a new form of L-arginine D-glutamate and a comparative study of amino acid crystal structures containing molecules of the same and mixed chirality. J Biosci 1989. [DOI: 10.1007/bf02703163] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Vijayan M. Molecular interactions and aggregation involving amino acids and peptides and their role in chemical evolution. PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 1988; 52:71-99. [PMID: 3076685 DOI: 10.1016/0079-6107(88)90003-x] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
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