TANSLEY REVIEW No 1.: VARIATION IN PHOTOSYNTHETIC ACID METABOLISM IN VASCULAR PLANTS: CAM AND RELATED PHENOMENA

Evolutionary trajectories, accessibility and other metaphors: the case of C4 and CAM photosynthesis

Are evolutionary outcomes predictable? Adaptations that show repeated evolutionary convergence across the Tree of Life provide a special opportunity to dissect the context surrounding their origins, and identify any commonalities that may predict why certain traits evolved many times in particular clades and yet never evolved in others. The remarkable convergence of C₄ and Crassulacean Acid Metabolism (CAM) photosynthesis in vascular plants makes them exceptional model systems for understanding the repeated evolution of complex phenotypes. This review highlights what we have learned about the recurring assembly of C₄ and CAM, focusing on the increasingly predictable stepwise evolutionary integration of anatomy and biochemistry. With the caveat that we currently understand C₄ evolution better than we do CAM, I propose a general model that explains and unites C₄ and CAM evolutionary trajectories. Available data suggest that anatomical modifications are the 'rate-limiting step' in each trajectory, which in large part determines the evolutionary accessibility of both syndromes. The idea that organismal structure exerts a primary influence on innovation is discussed in the context of other systems. Whether the rate-limiting step occurs early or late in the evolutionary assembly of a new phenotype may have profound implications for its distribution across the Tree of Life.

Metabolite profiling in two contrasting Tibetan hulless barley cultivars revealed the core salt-responsive metabolome and key salt-tolerance biomarkers

Salinity stress represents one of the most harmful abiotic stresses for agricultural productivity. Tibetan hulless barley is an important economic crop widely grown in highly stressful conditions in the Qinghai-Tibet Plateau and is often challenged by salinity stress. To investigate the temporal metabolic responses to salinity stress in hulless barley, we performed a widely targeted metabolomic analysis of 72 leaf samples from two contrasting cultivars. We identified 642 compounds 57 % of which were affected by salt stress in the two cultivars, principally amino acids and derivatives, organic acids, nucleotides, and derivatives and flavonoids. A total of 13 stress-related metabolites including piperidine, L-tryptophan, L-glutamic acid, L-saccharopine, L-phenylalanine, 6-methylcoumarin, cinnamic acid, inosine 5'-monophosphate, aminomalonic acid, 6-aminocaproic acid, putrescine, tyramine and abscisic acid (ABA) represent the core metabolome responsive to salinity stress in hulless barley regardless of the tolerance level. In particular, we found that the ABA signalling pathway is essential to salt stress response in hulless barley. The high tolerance of the cultivar 0119 is due to a metabolic reprogramming at key stress times. During the early salt stress stages (0-24 h), 0119 tended to save energy through reduced glycolysis, nucleotide metabolism and amino acid synthesis, while increased antioxidant compounds such as flavonoids. Under prolonged stress (48-72 h), 0119 significantly enhanced energy production and amino acid synthesis. In addition, some important compatible solutes were strongly accumulated. By comparing the two cultivars, nine salt-tolerance biomarkers, mostly unreported salt-tolerance compounds in plants, were uncovered. Our study indicated that the salt tolerant hulless barley cultivar invokes a tolerance strategy which is conserved in other plant species. Overall, we provide for the first time some extensive metabolic data and some important salt-tolerance biomarkers which may assist in efforts to improve hulless barley tolerance to salinity stress.

The function of the aerenchyma in arborescent lycopsids: evidence of an unfamiliar metabolic strategy

Most species of the modern family Isoëtaceae (Quillworts) some other modern hydrophytes, use a metabolic pathway for carbon fixation that involves uptake of sedimentary carbon and enrichment of CO(2) in internal gas spaces as a carbon-concentrating mechanism. This metabolism, which is related to 'aquatic CAM', is characterized by morphological, physiological and biochemical adaptations for decreasing photorespirative loss, aerating roots and maintaining high growth rates in anoxic, oligotrophic, stressed environments. Some of the closest relatives of the Isoëtaceae were the 'arborescent lycopsids', which were among the dominant taxa in the coal swamps found in lowland ecosystems during the Carboniferous and Permian periods (approx. 300 Ma). Morphological, ecological and geochemical evidence supports the hypothesis that the arborescent lycopsids had an unusual metabolism similar to that of modern Isoëtaceae and processed a biogeochemically significant proportion of organically fixed carbon over a period of about 100 million years in the late Palaeozoic. The temporal coincidence between the dominance of plants with this metabolism and an anomalous global atmosphere (high O(2); low CO(2)) supports the idea that biosphere feedbacks are important in regulating global climatic homeostasis. The potential influence of this metabolism on the global carbon cycle and its specific adaptive function suggest that it should perhaps be considered a fourth major photosynthetic pathway.

Ability of crassulacean acid metabolism plants to overcome interacting stresses in tropical environments

BACKGROUND AND AIMS

Single stressors such as scarcity of water and extreme temperatures dominate the struggle for life in severely dry desert ecosystems or cold polar regions and at high elevations. In contrast, stress in the tropics typically arises from a dynamic network of interacting stressors, such as availability of water, CO(2), light and nutrients, temperature and salinity. This requires more plastic spatio-temporal responsiveness and versatility in the acquisition and defence of ecological niches.

CRASSULACEAN ACID METABOLISM

The mode of photosynthesis of crassulacean acid metabolism (CAM) is described and its flexible expression endows plants with powerful strategies for both acclimation and adaptation. Thus, CAM plants are able to inhabit many diverse habitats in the tropics and are not, as commonly thought, successful predominantly in dry, high-insolation habitats.

TROPICAL CAM HABITATS

Typical tropical CAM habitats or ecosystems include exposed lava fields, rock outcrops of inselbergs, salinas, savannas, restingas, high-altitude páramos, dry forests and moist forests.

MORPHOTYPICAL AND PHYSIOTYPICAL PLASTICITY OF CAM

Morphotypical and physiotypical plasticity of CAM phenotypes allow a wide ecophysiological amplitude of niche occupation in the tropics. Physiological and biochemical plasticity appear more responsive by having more readily reversible variations in performance than do morphological adaptations. This makes CAM plants particularly fit for the multi-factor stressor networks of tropical forests. Thus, while the physiognomy of semi-deserts outside the tropics is often determined by tall succulent CAM plants, tropical forests house many more CAM plants in terms of quantity (biomass) and quality (species diversity).

Differential usage of storage carbohydrates in the CAM bromeliad Aechmea 'Maya' during acclimation to drought and recovery from dehydration

CAM requires a substantial investment of resources into storage carbohydrates to account for nocturnal CO(2) uptake, thereby restricting carbohydrate partitioning to other metabolic activities, including dark respiration, growth and acclimation to abiotic stress. Flexible modulation of carbon flow to the different competing sinks under changing environmental conditions is considered a key determinant for the growth, productivity and ecological success of the CAM pathway. The aim of the present study was to examine how shifts in carbohydrate partitioning could assure maintenance of photosynthetic integrity and a positive carbon balance under conditions of increasing water deprivation in CAM species. Measurements of gas exchange, leaf water relations, malate, starch and soluble sugar (glucose, fructose and sucrose) contents were made in leaves of the CAM bromeliad Aechmea 'Maya' over a 6-month period of drought and subsequently over a 2-month period of recovery from drought. Results indicated that short-term influences of water stress were minimized by elevating the level of respiratory recycling, and carbohydrate pools were maintained at the expense of export for growth while providing a comparable nocturnal carbon gain to that in well-watered control plants. Longer term drought resulted in a disproportionate depletion of key carbohydrate reserves. Sucrose, which was of minor importance for providing substrate for the dark reactions under well-watered conditions, became the major source of carbohydrate for nocturnal carboxylation as drought progressed. Flexibility in terms of the major carbohydrate source used to sustain dark CO(2) uptake is therefore considered a crucial factor in meeting the carbon and energy demands under limiting environmental conditions. Recovery from CAM-idling was found to be dependent on the restoration of the starch pool, which was used predominantly for provision of substrate for nocturnal carboxylation, while net carbon export was limited. The conservation of starch for the nocturnal reactions might be adaptive with regard to responding efficiently to a return of water stress.

Welwitschia mirabilis: CAM or not CAM - what is the answer?

After more than 20 years of extensive study we found clear evidence that Welwitschia mirabilis Hook.f. is able to take up CO₂ at night in both of its natural ecosystems, the Namib desert and the Mopane savannah, and hence should be classified a crassulacean acid metabolism (CAM) plant. At six different sites, 85 W. mirabilis plants were marked and the growth rate of their leaves and leaf ribbons were measured over a period of 2.5 years. The slowest and the fastest growing plant of these 85 plants were from the Mopane savannah and from the north-west of the Brandberg massif, respectively. These were selected for the gas-exchange measurements of this study. Within the course of a year nocturnal CO₂ uptake was found only in December and January when the nights were shortest and plants were flowering. CO₂ uptake during the night was not pronounced and never accounted for more than 4% of the total CO₂ uptake over 24 h. Maximum rates of nocturnal CO₂ uptake never exceeded 0.1 µmol m^-2 s^-1 for the slowest and 0.2 µmol m^-2 s^-1 for the fastest growing plant. Neither water availability in the soil nor night temperature was found to determine nocturnal CO₂ uptake in terms known for CAM plants. Regardless of the growing site all leaves of W. mirabilis contained high amounts of malic and citric acid. Small increases of acids over night as calculated from the gas exchange measurements are masked by the extremely uneven distribution of these acids in the leaves, making the feature of an overnight malic or citric acid accumulation an unsuited test for CAM in W. mirabilis. An increase in ¹³C discrimination with increasing distance from the coast was confirmed. Photorespiration was extremely high and followed air temperature around the leaf. Although the debate whether or not W. mirabilis is a CAM plant can be closed, no answer could be given why W. mirabilis makes so little use of CAM.

Organic acid metabolism in plants: from adaptive physiology to transgenic varieties for cultivation in extreme soils

During the last 20 years increasing experimental evidence has associated organic acid metabolism with plant tolerance to environmental stress. Current knowledge shows that organic acids not only act as intermediates in carbon metabolism but also as key components in mechanisms that some plants use to cope with nutrient deficiencies, metal tolerance and plant-microbe interactions operating at the root-soil interphase. In this review we summarize recent knowledge on the physiology and occurrence of organic acids in plants and their special relevance concerning nitrate reduction, phosphorus and iron acquisition, aluminum tolerance and soil ecology. We also discuss novel findings in relation to the biotechnological manipulation of organic acids in transgenic models ranging from cell cultures to whole plants. This novel perspective of organic acid metabolism and its potential manipulation may represent a way to understand fundamental aspects of plant physiology and lead to new strategies to obtain crop varieties better adapted to environmental and mineral stress.

CRASSULACEAN ACID METABOLISM: Molecular Genetics

▪ Abstract  Crassulacean acid metabolism (CAM) is an adaptation of photosynthesis to limited availability of water or CO2. CAM is characterized by nocturnal CO2 fixation via the cytosolic enzyme PEP carboxylase (PEPC), formation of PEP by glycolysis, malic acid accumulation in the vacuole, daytime decarboxylation of malate and CO2 re-assimilation via ribulose-1,5-bisphosphate carboxylase (RUBISCO), and regeneration of storage carbohydrates from pyruvate and/or PEP by gluconeogenesis. Within this basic framework, the pathway exhibits an extraordinary range of metabolic plasticity governed by environmental, developmental, tissue-specific, hormonal, and circadian cues. Characterization of genes encoding key CAM enzymes has shown that a combination of transcriptional, posttranscriptional, translational, and posttranslational regulatory events govern the expression of the pathway. Recently, this information has improved our ability to dissect the regulatory and signaling events that mediate the expression and operation of the pathway. Molecular analysis and sequence information have also provided new ways of assessing the evolutionary origins of CAM. Genetic and physiological analysis of transgenic plants currently under development will improve our further understanding of the molecular genetics of CAM.

Comparative ecophysiology of five species of Sedum (Crassulaceae) under well-watered and drought-stressed conditions

Gas exchange patterns, diurnal malic acid fluctuations, and stable carbon isotope ratios of five species of Sedum were investigated to assess the ecophysiological characteristics of three different photosynthetic pathways under well-watered and drought-stressed conditions. All five species have succulent leaves and stems and were examined under identical environmental conditions. When well-watered, Sedum integrifolium (Raf.) Nels. and S. ternatum Michx. displayed C₃ photosynthesis, S. telephioides Michx. and S. nuttallianum Raf. exhibited CAM-cycling, and S. wrightii A. Gray showed CAM. When grown under a less frequent watering regime, S. integrifolium and S. ternatum exhibited CAM-cycling, whereas S. telephioides and S. nuttallianum displayed CAM-cycling simultaneously with low-level CAM. Sedum wrightii retained its CAM mode of photosynthesis. In general, leaf δ¹³C values reflected these variations in photosynthetic pathways. While all values of water-use efficiency (WUE) were greater than those reported for most C₃ and C₄ species, no correlation of malic acid accumulation in the CAM and CAM-cycling (including low-level CAM) species with increased WUE was found. Sedum wrightii (CAM) had the highest WUE value at night, yet its 24-h WUE was not different from S. ternatum when the latter was in the C₃ mode. Thus, relative water-use efficiencies of these species of Sedum were not predictable based on photosynthetic pathways alone.

Achievable productivities of certain CAM plants: basis for high values compared with C3 and C4 plants

CAM species, which taxonomically are at least five times more numerous than C₄ species, often grow-slowly, as is the case for various short-statured cacti and many epiphytes in several families, However, slow growth is not a necessary corollary of the CAM photosynthetic pathway, as can be appreciated by considering the energetics of CO₂ fixation. For every CO₂ fixed photosynthetically, C₃ plants require 3 ATP and 2 NADPH, whereas the extra enzymatic reactions and compartmentation complexity for C₄ plants require 4 or 5 ATP and 2 NADPH, and CAM plants require 5.5-6.5 ATP and 2 NADPH. Photorespiration in C₈ plants can release some of the CO₂ , fixed and also has an energetic-cost, whereas photorespiration is much less in C₄ and CAM plants. Therefore, CAM plants can perform net CO₂ fixation 15% more efficiently than C₃ , plants, although 10% less efficiently than C₄ plants. Using a simple model that assumes 8 photons per CO₂ fixed and a processing time per excitation of 5 ms, a maximum instantaneous rate for net CO₂ , uptake of 55 μmol m^-2 s^-1 is predicted. Measured maximal rates average 48μmol m^-2 s^-1 for leaves of six C₃ species with the highest rates and 64 μmol m^-2 s^-1 for six such C₄ species; CAM plants take up CO₂ mainly at night, which is not directly related to the instantaneous rate of photon absorption. Net CO₂ uptake integrated over 24 h, which is more pertinent to productivity than are instantaneous CO₂ uptake rates, is similar for the three pathways, although the higher water-use efficiency of CAM plants can be an advantage during drought. Canopy architecture is crucial for the distribution of the photosynthetic photon flux density (PPFD) over the shoot, which determines net CO₂ uptake per unit ground area and hence determines productivity. Maximal productivity for idealized canopies under optimal conditions is predicted to be about 100 Mg d. wt ha^-1 yr^-1 (1 Mg = 1 tonne), whereas actual values of environmental factors in the field approximately halve this prediction. The influence of environmental factors on net CO₂ uptake can be quantified using an environmental productivity index (EPI), which predicts the fractional limitation on net CO₂ uptake and is the product of a water index, a temperature index, and a PPFD index (nutrient effects can also be included). Using EPI with a ray-tracing technique to determine the PPFD index and taking into account respiration and carbon incorporated structurally, maximal productivity of CAM plants is predicted to occur at leaf or stem area indices of 4-5. In experiments designed using such shoot area indices, annual above-ground dry-weight productivities averaging 43 Mg ha^-1 yr^-1 have recently been observed for certain agaves and plutyopuntias. In comparison, the measured average annual productivity of the most productive plants is 49 Mg ha^-1 yr^-1 for six agronomic C₄ species, 35 Mg ha^-1 yr^-1 for sis agronomic C₃ species, and 39 Mg ha^-1 yr^-1 for six C₃ tree species. Thus, CAM plants are capable of similar high productivities, which can become especially advantageous in regions of substantial water stress. Recognition of the high potential productivity of certain CAM species under optimal environmental conditions, exceeding that of most C₃ species, may increase the cultivation of such CAM plants in various areas in the future. CONTENTS Summary 183 I. Introduction 184 II. Biochemistry of C₃ , C₄ , and CAM plants 185 III. CO₂ uptake rates 188 IV. Canopy architecture and light absorption 193 V. Measured biomass productivity 198 VI. Conclusions 200 Acknowledgement 202 References 202.

Plasticity in the degree of CAM-cycling and its relationship to drought stress in five species of Talinum (Portulacaceae)

The degree of CAM-cycling was examined in plants from 23 populations representing five morphologically similar species of Talinum to determine how CAM-cycling correlates with site aridity and drought stress. In the field, CAM-cycling, as indicated by the amount of malic acid accumulated in plant tissues overnight, and stable carbon isotope ratio (δ¹³C) were positively correlated with an index of site aridity. The relative levels of CAM-cycling and δ¹³C values among populations in the field reversed when plants were grown under less arid conditions in a growth chamber such that populations with the highest average CAM-cycling and δ¹³C in the field had the lowest averages in the growth chamber. In both cases, plants from all populations showed significantly higher levels of CAM-cycling under drought-stressed conditions relative to conditions known or predicted to be less arid. CAM-cycling was also positively correlated with tissue water content in both well-watered and drought-stressed plants, possibly reflecting greater water conservation associated with reductions in stomatal conductance. Biomass accumulation in plants exhibiting the greatest degree of CAM-cycling in the growth chamber was suppressed by drought stress to a similar degree as in the other plants, yet reproductive biomass of these plants was inhibited to a smaller degree. Thus, the importance of CAM-cycling increases in these species of Talinum during drought stress, due to increased malic acid accumulation overnight, potentially enhancing their water status, survival, and reproduction.

Regulation of malic-acid metabolism in Crassulacean-acid-metabolism plants in the dark and light: In-vivo evidence from (13)C-labeling patterns after (13)CO 2 fixation

The labeling patterns in malic acid from dark (13)CO2 fixation in seven species of succulent plants with Crassulacean acid metabolism were analysed by gas chromatography-mass spectrometry and (13)C-nuclear magnetic resonance spectrometry. Only singly labeled malic-acid molecules were detected and on the average, after 12-14 h dark (13)CO2 fixation the ratio of [4-(13)C] to [1-(13)C] label was 2:1. However the 4-C carboxyl contained from 72 to 50% of the label depending on species and temperature. The (13)C enrichment of malate and fumarate was similar. These data confirm those of W. Cockburn and A. McAuley (1975, Plant Physiol. 55, 87-89) and indicate fumarase randomization is responsible for movement of label to 1-C malic acid following carboxylation of phosphoenolpyruvate. The extent of randomization may depend on time and on the balance of malic-acid fluxes between mitochondria and vacuoles. The ratio of labeling in 4-C to 1-C of malic acid which accumulated following (13)CO2 fixation in the dark did not change during deacidification in the light and no doubly-labeled molecules of malic acid were detected. These results indicate that further fumarase randomization does not occur in the light, and futile cycling of decarboxylation products of [(13)C] malic acid ((13)CO2 or [1-(13)C]pyruvate) through phosphoenolpyruvate carboxylase does not occur, presumably because malic acid inhibits this enzyme in the light in vivo. Short-term exposure to (13)CO2 in the light after deacidification leads to the synthesis of singly and multiply labeled malic acid in these species, as observed by E.W. Ritz et al. (1986, Planta 167, 284-291). In the shortest times, only singly-labeled [4-(13)C]malate was detected but this may be a consequence of the higher intensity and better detection statistics of this ion cluster during mass spectrometry. We conclude that both phosphoenolpyruvate carboxylase (EC 4.1.1.32) and ribulose-1,5-biphosphate carboxylase (EC 4.1.1.39) are active at this time.

The role of CO2 uptake by roots and CAM in acquisition of inorganic C by plants of the isoetid life-form: a review, with new data on Eriocaulon decangulare L

The isoetid life-form was originally defined on morphological grounds; subsequent physiological investigations showed that all of the isoetids examined took up a large fraction of the inorganic C fixed in their leaves from the root medium under natural conditions, and that some of them carried out much of their assimilation of inorganic C via a CAM-like mechanism. Root-dominated uptake of inorganic C appeared to be unique to, and ubiquitous in, the isoetids. I However, a large capacity for CAM-like metabolism in submerged vascular plants is not universal in isoetids, nor is it restricted to this life-form, being also found in Crassulaa aquatica. The work described here shows that submerged specimens of the North American Eriocaulon decangulare have a high fraction of their dry weight in the root system, a trait characteristic of isoetids but uncommon in other submerged vascular plants. E. decangulare has vesicular-arbuscular mycorrhizas, as do other flowering plant isoetids hut not, generally, submerged Isoetes spp. Under conditions of natural supply of inorganic C, E. decangulare, like other isoetids, takes up most of its inorganic C through its roots. Uptake of inorganic C by both roots and shoots involves CO₂ rather than HCO₃ : photosynthesis at high external pH values does not exceed the rate of uncatalysed HCO₃ ^- to CO₂ conversion in the medium and there is no detectable extracellular carbonic anhydrase activity. Measurements of titratable acidity and of malate content of leaves sampled at dawn and at dusk showed that E. decangulare, growing and tested under either emersed or submersed conditions, did not exhibit CAM-like behaviour. CAM was also absent from three non-isoetid aquatic macrophytes (Amphibolic antarctica, Eeklonia radiata and Vallisneria spiralis) which were examined. E. decangulare thus resembles all other isoetids tested in acquiring much of its inorganic C via the root system. E. decangulare also resembles most of the isoetids which are not members of the Isoetaceae (e.g.) E. septangulare, Lobelia dortmanna and Subularia aquatica) but differs from submerged Isoetaceae and Littorella uniflora in lacking CAM. The ecological significance of uptake of CO₂ via the roots and, where it occurs, of CAM in isoetids may be related to either inorganic C or, via improved N use efficiency, inorganic C as a limiting resource. The isoetid life-forms has evolved independently in at last five different families of vascular plants; it probably derived fairly immediately from terrestrial or amphibious ancestors with a similar rosette form. Emergent Isoetaceae with acquisition of CO₂ via roots and CAM probably evolved from submerged isoetids. CONTENTS Summary 123 I. Introduction 126 II. Material and Methods 127 III. Results and Discussion 129 IV. Conclusions 142 Acknowledgements 142 References 143.

CARBON DIOXIDE AND WATER DEMAND: CRASSULACEAN ACID METABOLISM (CAM), A VERSATILE ECOLOGICAL ADAPTATION EXEMPLIFYING THE NEED FOR INTEGRATION IN ECOPHYSIOLOGICAL WORK

Plants having crassulacean acid metabolism (CAM) tend to occupy habitats where the prevailing environmental stress is scarcity of water. These are semi-arid or arid regions, salinas or epiphytic sites. CAM plants manage the dilemma of desiccation or starvation by nocturnal malic acid accumulation in the vacuoles. Malic acid serves as a form of CO₂ storage and as an osmoticum. In this way malic acid accumulation allows, firstly, separation of uptake and assimilation of atmospheric CO₂ with water-saving daytime stomatal closure and, secondly, osmotic acquisition of water. There is no very special trait which is specific for CAM. An array of biophysical and biochemical functional elements, which are also found in other plants, is integrated in CAM performance. This leads to a large diversity of behaviour which makes CAM plants highly versatile in their response to environmental variables. Besides CO₂ dark fixation, transport of malic acid across the tonoplast is one of the key elements in CAM function. This is examined in detail at the level of membrane biophysics and biochemistry. The versatility of CAM is illustrated by examples from field work, with comparisons involving different species, seasons, modes of photosynthesis (CAM vs C₃ ), kinds of stress and ways of stress imposition. Contents Summary 593 I. Studies of CAM: an example for the ecophysiological approach 594 II. Malic acid transport at the tonoplast 602 III. Regulation 605 IV. Desiccation or starvation 610 V. Comparative autecology 614 VI. Ecology: promise of integration 621 Acknowledgements 622 References 622.