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Bodar PA, Thakur RS, Rajai JV, Bhushan S, Mantri VA. A metabolomic snapshot through NMR revealed differences in phase transition during the induction of reproduction in Ulva ohnoi (Chlorophyta). Mol Omics 2024; 20:86-102. [PMID: 38239131 DOI: 10.1039/d3mo00197k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/20/2024]
Abstract
The present study deals with the metabolomic status of Ulva cells undergoing phase transition (vegetative, determination and differentiation) when exposed to different abiotic conditions. The objective was to study whether metabolite changes occurring during the phase transition reveal any commonality among differential abiotic conditions. The phase transition was followed through microscopic observations and 1H NMR characterization at 0 h, 24 h, and 48 h after the incubation of the thallus under abiotic conditions, such as different salinities (20-35 psu), temperatures (20-35 °C), photoperiods (18 : 6, 12 : 12, and 6 : 18 D/N), light intensities (220, 350, and 500 μmol photons m-2 s-1), nitrate (0.05-0.2 g L-1) and phosphate (0.05-0.2 g L-1) concentrations. Microscopic analysis revealed the role of all abiotic conditions except variable salinity and phosphate concentration in phase transition. NMR analysis revealed that glucose increased in the determination phase [7.58 to 9.62 normalized intensity (AU)] and differentiation phase (5.85 to 6.41 AU) from 20 °C to 25 °C temperature. Coniferyl aldehyde increased in vegetative (5.79 to 6.83 AU) and differentiation (6.66 to 7.40 AU) phases from 20 °C to 30 °C temperature. The highest average (22.97) was found in photoperiod (average range = 0-122.91) and the highest SD (24.73) in salinity (SD range = 1.86-57.04) in region 9 (creatinine and cysteine) of the differentiation phase. A total of 30 metabolites were identified under the categories of sugars, amino acids, and aromatic compounds. The present study will aid in understanding the mechanisms underlying cell differentiation during reproduction. The result may serve as an important reference point for future studies, besides helping in controlling seedling preparation for commercial farming as well as the management of rapid green tide formation.
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Affiliation(s)
- Payal A Bodar
- Applied Phycology and Biotechnology Division, CSIR- Central Salt and Marine Chemicals Research Institute, Gijubhai Badheka Road, Bhavnagar - 364002, India.
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad - 201002, India
| | - Rajendra Singh Thakur
- Analytical and Environmental, Science Division and Centralized Instrument Facility, Bhavnagar 364002, India.
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad - 201002, India
| | - Jasmine V Rajai
- Applied Phycology and Biotechnology Division, CSIR- Central Salt and Marine Chemicals Research Institute, Gijubhai Badheka Road, Bhavnagar - 364002, India.
| | - Satej Bhushan
- Applied Phycology and Biotechnology Division, CSIR- Central Salt and Marine Chemicals Research Institute, Gijubhai Badheka Road, Bhavnagar - 364002, India.
| | - Vaibhav A Mantri
- Applied Phycology and Biotechnology Division, CSIR- Central Salt and Marine Chemicals Research Institute, Gijubhai Badheka Road, Bhavnagar - 364002, India.
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad - 201002, India
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Liu X, Blomme J, Bogaert KA, D’hondt S, Wichard T, Deforce D, Van Nieuwerburgh F, De Clerck O. Transcriptional dynamics of gametogenesis in the green seaweed Ulva mutabilis identifies an RWP-RK transcription factor linked to reproduction. BMC PLANT BIOLOGY 2022; 22:19. [PMID: 34991492 PMCID: PMC8734247 DOI: 10.1186/s12870-021-03361-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/19/2021] [Accepted: 11/17/2021] [Indexed: 06/02/2023]
Abstract
BACKGROUND The molecular mechanism underlying sexual reproduction in land plants is well understood in model plants and is a target for crop improvement. However, unlike land plants, the genetic basis involved in triggering reproduction and gamete formation remains elusive in most seaweeds, which are increasingly viewed as an alternative source of functional food and feedstock for energy applications. RESULTS Gametogenesis of Ulva mutabilis, a model organism for green seaweeds, was studied. We analyzed transcriptome dynamics at different time points during gametogenesis following induction of reproduction by fragmentation and removal of sporulation inhibitors. Analyses demonstrated that 45% of the genes in the genome were differentially expressed during gametogenesis. We identified several transcription factors that potentially play a key role in the early gametogenesis of Ulva given the function of their homologs in higher plants and microalgae. In particular, the detailed expression pattern of an evolutionarily conserved transcription factor containing an RWP-RK domain suggested a key role during Ulva gametogenesis. CONCLUSIONS Transcriptomic analyses of gametogenesis in the green seaweed Ulva highlight the importance of a conserved RWP-RK transcription factor in the induction of sexual reproduction. The identification of putative master regulators of gametogenesis provides a starting point for further functional characterization.
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Affiliation(s)
- Xiaojie Liu
- Phycology Research Group and Center for Molecular Phylogenetics and Evolution, Ghent University, Ghent, Belgium
| | - Jonas Blomme
- Phycology Research Group and Center for Molecular Phylogenetics and Evolution, Ghent University, Ghent, Belgium
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Ghent, Belgium
| | - Kenny A. Bogaert
- Phycology Research Group and Center for Molecular Phylogenetics and Evolution, Ghent University, Ghent, Belgium
| | - Sofie D’hondt
- Phycology Research Group and Center for Molecular Phylogenetics and Evolution, Ghent University, Ghent, Belgium
| | - Thomas Wichard
- Institute for Inorganic and Analytical Chemistry, Jena School for Microbial Communication, Friedrich Schiller University Jena, Jena, Germany
| | - Dieter Deforce
- Laboratory of Pharmaceutical Biotechnology, Ghent University, 9000 Ghent, Belgium
| | | | - Olivier De Clerck
- Phycology Research Group and Center for Molecular Phylogenetics and Evolution, Ghent University, Ghent, Belgium
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Kaiser TS, Neumann J. Circalunar clocks-Old experiments for a new era. Bioessays 2021; 43:e2100074. [PMID: 34050958 DOI: 10.1002/bies.202100074] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2021] [Revised: 04/28/2021] [Accepted: 05/03/2021] [Indexed: 12/23/2022]
Abstract
Circalunar clocks, which allow organisms to time reproduction to lunar phase, have been experimentally proven but are still not understood at the molecular level. Currently, a new generation of researchers with new tools is setting out to fill this gap. Our essay provides an overview of classic experiments on circalunar clocks. From the unpublished work of the late D. Neumann we also present a novel phase response curve for a circalunar clock. These experiments highlight avenues for molecular work and call for rigor in setting up and analyzing the logistically complex experiments on circalunar clocks. Re-evaluating classic experiments, we propose that (1) circalunar clocks in different organisms will have divergent mechanisms and physiological bases, (2) they may have properties very different from the well-studied circadian clocks and (3) they may have close mechanistic and molecular relations to seasonal rhythms and diapause.
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Affiliation(s)
- Tobias S Kaiser
- Max Planck Research Group "Biological Clocks", Max Planck Institute for Evolutionary Biology, Plön, Germany
| | - Jule Neumann
- Max Planck Research Group "Biological Clocks", Max Planck Institute for Evolutionary Biology, Plön, Germany
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Circumnutation and Growth of Inflorescence Stems of Arabidopsis thaliana in Response to Microgravity under Different Photoperiod Conditions. Life (Basel) 2020; 10:life10030026. [PMID: 32197304 PMCID: PMC7151594 DOI: 10.3390/life10030026] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2020] [Revised: 03/06/2020] [Accepted: 03/07/2020] [Indexed: 11/16/2022] Open
Abstract
Circumnutation is a periodic growth movement, which is an important physiological mechanism of plants to adapt to their growth environments. Gravity and photoperiod are two key environmental factors in regulating the circumnutation of plants, but the coordination mechanism between them is still unknown. In this study, the circumnutation of Arabidopsis thaliana inflorescence stems was investigated on board the Chinese recoverable satellite SJ-10 and the Chinese spacelab TG-2. Plants were cultivated in a special plant culture chamber under two photoperiod conditions [a long-day (LD) light: dark cycle of 16:8 h, and a short-day (SD) light: dark cycle of 8:16 h]. The plant growth and movements were followed by two charge-coupled device (CCD) cameras. The parameter revealed a daily (24 h) modulation on both TG-2 and SJ-10, under both the LD and the SD conditions. The inhibition of circumnutation was more apparent by microgravity under the SD in comparison with that under the LD condition, suggesting the synergistic effects of the combined microgravity and photoperiod on the circumnutation in space. In addition, an infradian rhythm (ca. 21 days long) on the TG-2 was also observed.
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Deveau AM, Miller-Hope Z, Lloyd E, Williams BS, Bolduc C, Meader JM, Weiss F, Burkholder KM. Antimicrobial activity of extracts from macroalgae Ulva lactuca against clinically important Staphylococci is impacted by lunar phase of macroalgae harvest. Lett Appl Microbiol 2016; 62:363-71. [PMID: 26958825 DOI: 10.1111/lam.12563] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2015] [Revised: 03/03/2016] [Accepted: 03/04/2016] [Indexed: 11/27/2022]
Abstract
UNLABELLED Staphylococcus aureus is a common human bacterial pathogen that causes skin and soft tissue infections. Methicillin-resistant Staph. aureus (MRSA) are increasingly drug-resistant, and thus there is great need for new therapeutics to treat Staph. aureus infections. Attention has focused on potential utility of natural products, such as extracts of marine macroalgae, as a source of novel antimicrobial compounds. The green macroalgae Ulva lactuca produces compounds inhibitory to human pathogens, although the effectiveness of U. lactuca extracts against clinically relevant strains of Staph. aureus is poorly understood. In addition, macroalgae produce secondary metabolites that may be influenced by exogenous factors including lunar phase, but whether lunar phase affects U. lactuca antimicrobial capacity is unknown. We sought to evaluate the antibacterial properties of U. lactuca extracts against medically important Staphylococci, and to determine the effect of lunar phase on antimicrobial activity. We report that U. lactuca methanolic extracts inhibit a range of Staphylococci, and that lunar phase of macrolagae harvest significantly impacts antimicrobial activity, suggesting that antimicrobial properties can be maximized by manipulating time of algal harvest. These findings provide useful parameters for future studies aimed at isolating and characterizing U. lactuca anti-Staphylococcal agents. SIGNIFICANCE AND IMPACT OF THE STUDY The growing prevalence of antibiotic-resistant human pathogens such as methicillin-resistant Staphylococcus aureus (MRSA) has intensified efforts towards discovery and development of novel therapeutics. Marine macroalgae like Ulva lactuca are increasingly recognized as potential sources of antimicrobials, but the efficacy of U. lactuca extracts against common, virulent strains of Staph. aureus is poorly understood. We demonstrate that U. lactuca methanolic extracts inhibit a variety of clinically relevant Staphylococcus strains, and that the antimicrobial activity can be maximized by optimizing time of algal harvest. These findings provide potentially useful parameters for future work of isolating and identifying novel antimicrobial agents from macroalgae.
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Affiliation(s)
- A M Deveau
- Department of Chemistry and Physics, University of New England, Biddeford, ME, USA
| | - Z Miller-Hope
- Department of Marine Sciences, University of New England, Biddeford, ME, USA
| | - E Lloyd
- Department of Biology, University of New England, Biddeford, ME, USA
| | - B S Williams
- Department of Chemistry and Physics, University of New England, Biddeford, ME, USA.,Departments of Biology and Chemistry, Wheaton College, Norton, MA, USA
| | - C Bolduc
- Department of Chemistry and Physics, University of New England, Biddeford, ME, USA.,Department of Biology, University of New England, Biddeford, ME, USA
| | - J M Meader
- Department of Chemistry and Physics, University of New England, Biddeford, ME, USA.,Department of Biology, University of New England, Biddeford, ME, USA
| | - F Weiss
- Department of Biology, University of New England, Biddeford, ME, USA
| | - K M Burkholder
- Department of Biology, University of New England, Biddeford, ME, USA
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Wichard T. Exploring bacteria-induced growth and morphogenesis in the green macroalga order Ulvales (Chlorophyta). FRONTIERS IN PLANT SCIENCE 2015; 6:86. [PMID: 25784916 PMCID: PMC4347444 DOI: 10.3389/fpls.2015.00086] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/10/2014] [Accepted: 02/02/2015] [Indexed: 05/23/2023]
Abstract
Green macroalgae, such as Ulvales, lose their typical morphology completely when grown under axenic conditions or in the absence of the appropriate microbiome. As a result, slow growing aberrant phenotypes or even callus-like morphotypes are observed in Ulvales. The cross-kingdom interactions between marine algae and microorganisms are hence not only restricted by the exchange of macronutrients, including vitamins and nutrients, but also by infochemicals such as bacterial morphogenetic compounds. The latter are a fundamental trait mediating the mutualism within the chemosphere where the organisms interact with each other via compounds in their surroundings. Approximately 60 years ago, pilot studies demonstrated that certain bacteria promote growth, whereas other bacteria induce morphogenesis; this is particularly true for the order of Ulvales. However, only slow progress was made towards the underlying mechanism due to the complexity of, for example, algal cultivation techniques, and the lack of standardized experiments in the laboratory. A breakthrough in this research was the discovery of the morphogenetic compound thallusin, which was isolated from an epiphytic bacterium and induces normal germination restoring the foliaceous morphotypes of Monostroma. Owing to the low concentration, the purification and structure elucidation of highly biologically active morphogenetic compounds are still challenging. Recently, it was found that only the combination of two specific bacteria from the Rhodobacteraceae and Flavobacteriaceae can completely recover the growth and morphogenesis of axenic Ulva mutabilis cultures forming a symbiotic tripartite community by chemical communication. This review combines literature detailing evidences of bacteria-induced morphogenesis in Ulvales. A set of standardized experimental approaches is further proposed for the preparation of axenic algal tissues, bacteria isolation, co-cultivation experiments, and the analysis of the chemosphere.
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Affiliation(s)
- Thomas Wichard
- *Correspondence: Thomas Wichard, Institute for Inorganic and Analytical Chemistry, Jena School for Microbial Communication, Friedrich Schiller University Jena, Lessingstr. 8, Jena 07743, Germany e-mail:
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Wichard T, Charrier B, Mineur F, Bothwell JH, Clerck OD, Coates JC. The green seaweed Ulva: a model system to study morphogenesis. FRONTIERS IN PLANT SCIENCE 2015; 6:72. [PMID: 25745427 PMCID: PMC4333771 DOI: 10.3389/fpls.2015.00072] [Citation(s) in RCA: 84] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2014] [Accepted: 01/26/2015] [Indexed: 05/23/2023]
Abstract
Green macroalgae, mostly represented by the Ulvophyceae, the main multicellular branch of the Chlorophyceae, constitute important primary producers of marine and brackish coastal ecosystems. Ulva or sea lettuce species are some of the most abundant representatives, being ubiquitous in coastal benthic communities around the world. Nonetheless the genus also remains largely understudied. This review highlights Ulva as an exciting novel model organism for studies of algal growth, development and morphogenesis as well as mutualistic interactions. The key reasons that Ulva is potentially such a good model system are: (i) patterns of Ulva development can drive ecologically important events, such as the increasing number of green tides observed worldwide as a result of eutrophication of coastal waters, (ii) Ulva growth is symbiotic, with proper development requiring close association with bacterial epiphytes, (iii) Ulva is extremely developmentally plastic, which can shed light on the transition from simple to complex multicellularity and (iv) Ulva will provide additional information about the evolution of the green lineage.
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Affiliation(s)
- Thomas Wichard
- Institute for Inorganic and Analytical Chemistry, Jena School for Microbial Communication, Friedrich Schiller University Jena, Jena, Germany
| | - Bénédicte Charrier
- UMR 8227, Integrative Biology of Marine Models, Station Biologique de Roscoff, Centre National de la Recherche Scientifique, Roscoff, France
- UMR 8227, Integrative Biology of Marine Models, Station Biologique de Roscoff, Sorbonne Universités, UPMC University of Paris 06, Roscoff, France
| | - Frédéric Mineur
- School of Biological Sciences, Queen’s University of Belfast, Belfast, UK
| | - John H. Bothwell
- School of Biological and Biomedical Sciences and Durham Energy Institute, Durham University, Durham, UK
| | - Olivier De Clerck
- Phycology Research Group and Center for Molecular Phylogenetics and Evolution, Ghent University, Ghent, Belgium
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Methods for the induction of reproduction in a tropical species of filamentous ulva. PLoS One 2014; 9:e97396. [PMID: 24824896 PMCID: PMC4019596 DOI: 10.1371/journal.pone.0097396] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2014] [Accepted: 04/17/2014] [Indexed: 11/19/2022] Open
Abstract
The green seaweed Ulva is a major fouling organism but also an edible aquaculture product in Asia. This study quantified for the first time the effect of key factors on the reproduction of a tropical species of filamentous Ulva (Ulva sp. 3). The controlled timing of release of swarmers (motile reproductive bodies) was achieved when experiments were initiated in the early afternoon by exposing the thalli to a temperature shock (4°C) for 10 min and subsequently placing them into autoclaved filtered seawater under a 12 h light: 12 h dark photoperiod at 25°C. The release of swarmers then peaked two days after initiation. In contrast, segmentation, dehydration, salinity or time of initiation of experiments had no effect of any magnitude on reproduction. The released swarmers were predominantly biflagellate (95%), negatively phototactic and germinated without complementary gametes. This indicates that Ulva sp. 3 has a simple asexual life history dominated by biflagellate zoids.
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Soong K, Chang YH. Counting Circadian Cycles to Determine the Period of a Circasemilunar Rhythm in a Marine Insect. Chronobiol Int 2012; 29:1329-35. [DOI: 10.3109/07420528.2012.728548] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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Liu F, Pang SJ, Zhao XB, Hu CM. Quantitative, molecular and growth analyses of Ulva microscopic propagules in the coastal sediment of Jiangsu province where green tides initially occurred. MARINE ENVIRONMENTAL RESEARCH 2012; 74:56-63. [PMID: 22225862 DOI: 10.1016/j.marenvres.2011.12.004] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2011] [Revised: 12/15/2011] [Accepted: 12/16/2011] [Indexed: 05/31/2023]
Abstract
From 2007 to 2011, large-scale green tides formed by unattached filamentous alga, Ulva prolifera in Ulva linza-procera-prolifera complex, have initially occurred in Jiangsu coasts of China. The real niche or the substrate(s) on which U. prolifera attaches before it starts to float is still under debate. However, great numbers of Ulva propagules would be supposed to exist in the microscopic, overwintering stage for the next spring's bloom in coastal environments. This study was designed to confirm the above prediction and investigate abundance, species composition and growth characteristics of Ulva propagules in the sediments. Quantification result showed that Ulva propagules widely distributed in the sediments and the abundance of these isolates did not change much over a 3-month testing period at low temperature in darkness. Molecular data based on three DNA markers revealed that four Ulva species existed in the sediments, among which green-tide forming alga, U. prolifera, was included. Elevated levels of temperature, irradiance as well as nutrients in seawater greatly facilitated recovery and growth of propagules. Results of this investigation indicated the possibility of microscopic propagules turning directly into floating biomass in season when temperature, irradiance and nutrients together meet the required levels in questioned coastal water area.
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Affiliation(s)
- Feng Liu
- Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Chinese Academy of Sciences, 7 Nanhai Rd., Qingdao 266071, China
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Rapid mass movement of chloroplasts during segment formation of the calcifying siphonalean green alga, Halimeda macroloba. PLoS One 2011; 6:e20841. [PMID: 21750703 PMCID: PMC3130027 DOI: 10.1371/journal.pone.0020841] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2010] [Accepted: 05/13/2011] [Indexed: 11/30/2022] Open
Abstract
Background The calcifying siphonalean green alga, Halimeda macroloba is abundant on coral reefs and is important in the production of calcium carbonate sediments. The process by which new green segments are formed over-night is revealed here for the first time. Methodology/Principal Findings Growth of new segments was visualised by epifluorescence and confocal microscopy and by pulse amplitude modulation (PAM) fluorimetry. Apical colourless proto-segments were initiated on day 1, and formed a loose network of non-calcified, non-septate filaments, containing no chloroplasts. Rapid greening was initiated at dusk by i) the mass movement of chloroplasts into these filaments from the parent segment and ii) the growth of new filaments containing chloroplasts. Greening was usually complete in 3–5 h and certainly before dawn on day 2 when the first signs of calcification were apparent. Mass chloroplast movement took place at a rate of ∼0.65 µm/s. Photosynthetic yield and rate remained low for a period of 1 to several hours, indicating that the chloroplasts were made de novo. Use of the inhibitors colchicine and cytochalasin d indicated that the movement process is dependent on both microtubules and microfilaments. Significance This unusual process involves the mass movement of chloroplasts at a high rate into new segments during the night and rapid calcification on the following day and may be an adaptation to minimise the impact of herbivorous activity.
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Pang SJ, Liu F, Shan TF, Xu N, Zhang ZH, Gao SQ, Chopin T, Sun S. Tracking the algal origin of the Ulva bloom in the Yellow Sea by a combination of molecular, morphological and physiological analyses. MARINE ENVIRONMENTAL RESEARCH 2010; 69:207-215. [PMID: 19896707 DOI: 10.1016/j.marenvres.2009.10.007] [Citation(s) in RCA: 57] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2009] [Revised: 10/05/2009] [Accepted: 10/12/2009] [Indexed: 05/28/2023]
Abstract
In 2008, Qingdao (36 degrees 06'N, 120 degrees 25'E, PR China) experienced the world largest drifting macroalgal bloom composed of the filamentous macroalga Ulva prolifera. No convincing biologic evidence regarding the algal source is available so far. A series of field collections of both Ulva sp. and waters in various sites along Jiangsu coasts were conducted in March to May of 2009. Density of microscopic Ulva germlings in the waters sampled from different sites ranged from 7 to 3140 individuals L(-1), indicating the wide-spreading and long-term existence of the algae in the investigated region. Morphological and the nuclear ribosomal internal transcribed spacer ITS nrDNA and the chloroplast-encoded rbcL gene comparisons of 26 algal samples revealed that the algae collected from land-based animal aquaculture ponds mostly resembled the dominating blooming alga in 2008. Mismatch of Porphyra farming period with the occurrence of the green tide bloom, as well as the negative identification results of the sampled green algae from the Porphyra rafts eliminated Porphyra rafts as the principal and original source of the dominating blooming alga.
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Affiliation(s)
- Shao Jun Pang
- Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, PR China.
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