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Lata D, Coates BS, Walden KKO, Robertson HM, Miller NJ. Genome size evolution in the beetle genus Diabrotica. G3 (BETHESDA, MD.) 2022; 12:jkac052. [PMID: 35234880 PMCID: PMC8982398 DOI: 10.1093/g3journal/jkac052] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/28/2022] [Accepted: 02/22/2022] [Indexed: 11/20/2022]
Abstract
Diabrocite corn rootworms are one of the most economically significant pests of maize in the United States and Europe and an emerging model for insect-plant interactions. Genome sizes of several species in the genus Diabrotica were estimated using flow cytometry along with that of Acalymma vittatum as an outgroup. Genome sizes ranged between 1.56 and 1.64 gigabase pairs and between 2.26 and 2.59 Gb, respectively, for the Diabrotica subgroups fucata and virgifera; the Acalymma vittatum genome size was around 1.65 Gb. This result indicated that a substantial increase in genome size occurred in the ancestor of the virgifera group. Further analysis of the fucata group and the virgifera group genome sequencing reads indicated that the genome size difference between the Diabrotica subgroups could be attributed to a higher content of transposable elements, mostly miniature inverted-transposable elements and gypsy-like long terminal repeat retroelements.
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Affiliation(s)
- Dimpal Lata
- Department of Biological Sciences, Illinois Institute of Technology, Chicago, IL 60616, USA
| | - Brad S Coates
- USDA-ARS, Corn Insects & Crop Genetics Research Unit, Ames, IA 50011, USA
| | - Kimberly K O Walden
- Department of Entomology, University of Illinois at Urbana-Champaign, Urbana, IL 61820, USA
| | - Hugh M Robertson
- Department of Entomology, University of Illinois at Urbana-Champaign, Urbana, IL 61820, USA
| | - Nicholas J Miller
- Department of Biological Sciences, Illinois Institute of Technology, Chicago, IL 60616, USA
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2
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Glazier DS. Genome Size Covaries More Positively with Propagule Size than Adult Size: New Insights into an Old Problem. BIOLOGY 2021; 10:270. [PMID: 33810583 PMCID: PMC8067107 DOI: 10.3390/biology10040270] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/10/2021] [Revised: 03/18/2021] [Accepted: 03/23/2021] [Indexed: 12/17/2022]
Abstract
The body size and (or) complexity of organisms is not uniformly related to the amount of genetic material (DNA) contained in each of their cell nuclei ('genome size'). This surprising mismatch between the physical structure of organisms and their underlying genetic information appears to relate to variable accumulation of repetitive DNA sequences, but why this variation has evolved is little understood. Here, I show that genome size correlates more positively with egg size than adult size in crustaceans. I explain this and comparable patterns observed in other kinds of animals and plants as resulting from genome size relating strongly to cell size in most organisms, which should also apply to single-celled eggs and other reproductive propagules with relatively few cells that are pivotal first steps in their lives. However, since body size results from growth in cell size or number or both, it relates to genome size in diverse ways. Relationships between genome size and body size should be especially weak in large organisms whose size relates more to cell multiplication than to cell enlargement, as is generally observed. The ubiquitous single-cell 'bottleneck' of life cycles may affect both genome size and composition, and via both informational (genotypic) and non-informational (nucleotypic) effects, many other properties of multicellular organisms (e.g., rates of growth and metabolism) that have both theoretical and practical significance.
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3
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Miller JR, Koren S, Dilley KA, Puri V, Brown DM, Harkins DM, Thibaud-Nissen F, Rosen B, Chen XG, Tu Z, Sharakhov IV, Sharakhova MV, Sebra R, Stockwell TB, Bergman NH, Sutton GG, Phillippy AM, Piermarini PM, Shabman RS. Analysis of the Aedes albopictus C6/36 genome provides insight into cell line utility for viral propagation. Gigascience 2018; 7:1-13. [PMID: 29329394 PMCID: PMC5869287 DOI: 10.1093/gigascience/gix135] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2017] [Accepted: 12/23/2017] [Indexed: 12/25/2022] Open
Abstract
Background The 50-year-old Aedes albopictus C6/36 cell line is a resource for the detection, amplification, and analysis of mosquito-borne viruses including Zika, dengue, and chikungunya. The cell line is derived from an unknown number of larvae from an unspecified strain of Aedes albopictus mosquitoes. Toward improved utility of the cell line for research in virus transmission, we present an annotated assembly of the C6/36 genome. Results The C6/36 genome assembly has the largest contig N50 (3.3 Mbp) of any mosquito assembly, presents the sequences of both haplotypes for most of the diploid genome, reveals independent null mutations in both alleles of the Dicer locus, and indicates a male-specific genome. Gene annotation was computed with publicly available mosquito transcript sequences. Gene expression data from cell line RNA sequence identified enrichment of growth-related pathways and conspicuous deficiency in aquaporins and inward rectifier K+ channels. As a test of utility, RNA sequence data from Zika-infected cells were mapped to the C6/36 genome and transcriptome assemblies. Host subtraction reduced the data set by 89%, enabling faster characterization of nonhost reads. Conclusions The C6/36 genome sequence and annotation should enable additional uses of the cell line to study arbovirus vector interactions and interventions aimed at restricting the spread of human disease.
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Affiliation(s)
- Jason R Miller
- J. Craig Venter Institute, 9714 Medical Center Drive, Rockville, MD 20850, USA.,College of Natural Sciences and Mathematics, Shepherd University, Shepherdstown, WV 25443, USA
| | - Sergey Koren
- Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, Bethesda, MD 20892, USA
| | - Kari A Dilley
- J. Craig Venter Institute, 9714 Medical Center Drive, Rockville, MD 20850, USA
| | - Vinita Puri
- J. Craig Venter Institute, 9714 Medical Center Drive, Rockville, MD 20850, USA
| | - David M Brown
- J. Craig Venter Institute, 9714 Medical Center Drive, Rockville, MD 20850, USA
| | - Derek M Harkins
- J. Craig Venter Institute, 9714 Medical Center Drive, Rockville, MD 20850, USA
| | | | - Benjamin Rosen
- USDA 10300 Baltimore Ave., Bldg 306 Barc-East, Beltsville, MD 20705-2350, USA
| | - Xiao-Guang Chen
- Department of Pathogen Biology, School of Public Health and Tropical Medicine, Southern Medical University, Guangzhou 510515, China
| | - Zhijian Tu
- Department of Biochemistry and the Fralin Life Science Institute, Virginia Tech, Blacksburg, VA, USA
| | - Igor V Sharakhov
- Department of Entomology and the Fralin Life Science Institute, Virginia Tech, Blacksburg, VA, USA.,Laboratory of Ecology, Genetics and Environmental Protection, Tomsk State University, Tomsk, Russia
| | - Maria V Sharakhova
- Department of Entomology and the Fralin Life Science Institute, Virginia Tech, Blacksburg, VA, USA.,Laboratory of Ecology, Genetics and Environmental Protection, Tomsk State University, Tomsk, Russia
| | - Robert Sebra
- Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA
| | | | | | - Granger G Sutton
- J. Craig Venter Institute, 9714 Medical Center Drive, Rockville, MD 20850, USA
| | - Adam M Phillippy
- Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, Bethesda, MD 20892, USA
| | - Peter M Piermarini
- J. Craig Venter Institute, 9714 Medical Center Drive, Rockville, MD 20850, USA.,Department of Entomology, The Ohio State University, Ohio Agricultural Research and Development Center, Wooster, OH 44691, USA
| | - Reed S Shabman
- J. Craig Venter Institute, 9714 Medical Center Drive, Rockville, MD 20850, USA.,ATCC, 217 Perry Parkway, Gaithersburg, MD 20877, USA
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4
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Liu GC, Dong ZW, He JW, Zhao RP, Wang W, Li XY. Genome size of 14 species of fireflies (Insecta, Coleoptera, Lampyridae). Zool Res 2017; 38:449-458. [PMID: 29280364 PMCID: PMC5767557 DOI: 10.24272/j.issn.2095-8137.2017.078] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2017] [Accepted: 11/01/2017] [Indexed: 12/19/2022] Open
Abstract
Eukaryotic genome size data are important both as the basis for comparative research into genome evolution and as estimators of the cost and difficulty of genome sequencing programs for non-model organisms. In this study, the genome size of 14 species of fireflies (Lampyridae) (two genera in Lampyrinae, three genera in Luciolinae, and one genus in subfamily incertae sedis) were estimated by propidium iodide (PI)-based flow cytometry. The haploid genome sizes of Lampyridae ranged from 0. 42 to 1. 31 pg, a 3. 1-fold span. Genome sizes of the fireflies varied within the tested subfamilies and genera. Lamprigera and Pyrocoelia species had large and small genome sizes, respectively. No correlation was found between genome size and morphological traits such as body length, body width, eye width, and antennal length. Our data provide additional information on genome size estimation of the firefly family Lampyridae. Furthermore, this study will help clarify the cost and difficulty of genome sequencing programs for non-model organisms and will help promote studies on firefly genome evolution.
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Affiliation(s)
- Gui-Chun Liu
- State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming Yunnan 650223, China
- Center for Ecological and Environmental Sciences, Key Laboratory for Space Bioscience & Biotechnology, Northwestern Polytechnical University, Xi'an Shaanxi 710072, China
| | - Zhi-Wei Dong
- State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming Yunnan 650223, China
| | - Jin-Wu He
- State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming Yunnan 650223, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ruo-Ping Zhao
- State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming Yunnan 650223, China
| | - Wen Wang
- State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming Yunnan 650223, China
- Center for Ecological and Environmental Sciences, Key Laboratory for Space Bioscience & Biotechnology, Northwestern Polytechnical University, Xi'an Shaanxi 710072, China
| | - Xue-Yan Li
- State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming Yunnan 650223, China.
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Lower SS, Johnston JS, Stanger-Hall KF, Hjelmen CE, Hanrahan SJ, Korunes K, Hall D. Genome Size in North American Fireflies: Substantial Variation Likely Driven by Neutral Processes. Genome Biol Evol 2017; 9:1499-1512. [PMID: 28541478 PMCID: PMC5499882 DOI: 10.1093/gbe/evx097] [Citation(s) in RCA: 37] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 05/24/2017] [Indexed: 12/11/2022] Open
Abstract
Eukaryotic genomes show tremendous size variation across taxa. Proximate explanations for genome size variation include differences in ploidy and amounts of noncoding DNA, especially repetitive DNA. Ultimate explanations include selection on physiological correlates of genome size such as cell size, which in turn influence body size, resulting in the often-observed correlation between body size and genome size. In this study, we examined body size and repetitive DNA elements in relationship to the evolution of genome size in North American representatives of a single beetle family, the Lampyridae (fireflies). The 23 species considered represent an excellent study system because of the greater than 5-fold range of genome sizes, documented here using flow cytometry, and the 3-fold range in body size, measured using pronotum width. We also identified common genomic repetitive elements using low-coverage sequencing. We found a positive relationship between genome size and repetitive DNA, particularly retrotransposons. Both genome size and these elements were evolving as expected given phylogenetic relatedness. We also tested whether genome size varied with body size and found no relationship. Together, our results suggest that genome size is evolving neutrally in fireflies.
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Affiliation(s)
| | | | | | | | | | | | - David Hall
- Department of Genetics, University of Georgia
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6
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Groeters FR, Shaw DD. ASSOCIATION BETWEEN LATITUDINAL VARIATION FOR EMBRYONIC DEVELOPMENT TIME AND CHROMOSOME STRUCTURE IN THE GRASSHOPPER CALEDIA CAPTIVA (ORTHOPTERA: ACRIDIDAE). Evolution 2017; 46:245-257. [PMID: 28564964 DOI: 10.1111/j.1558-5646.1992.tb01999.x] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/1991] [Accepted: 08/06/1991] [Indexed: 11/28/2022]
Abstract
From southeastern Queensland to southern Victoria, over a transect of 11° latitude, the Moreton taxon of the Australian grasshopper Caledia captiva exhibits a cline in chromosome structure that involves change from a metacentric to an acrocentric genome. In this study, we show that embryonic development time covaries with chromosome structure along the transect. Both development time and chromosome short arm length exhibit an overall negative correlation with latitude, but with maxima just south of the northern limit of the taxon's distribution. Selection for such a pattern appears to arise from changes in voltinism along the cline in season length that exists along the transect. Populations with the highest temperature thresholds for avoidance of embryonic diapause also have the slowest development time and probably represent the northern extreme of a primarily univoltine life cycle. North of this region bivoltinism increases in frequency and, as expected from a split of the season length, development time decreases. Maximum chromosome short arm length occurs in the vicinity of the northern univoltine populations, rather than at the limit of distribution where bivoltinism prevails. We conclude that variation in chromosome structure could be contributing to the heritable variation for development time that forms the basis for adaptive change in this trait. These results provide justification for investigating causal relationships between chromosome structure and development time, with an ultimate aim of understanding the adaptive significance of chromosomal variation in C. captiva.
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Affiliation(s)
- Francis R Groeters
- Molecular and Population Genetics Group, Research School of Biological Sciences, The Australian National University, P.O. Box 475, Canberra, A.C.T. 2601, AUSTRALIA
| | - David D Shaw
- Molecular and Population Genetics Group, Research School of Biological Sciences, The Australian National University, P.O. Box 475, Canberra, A.C.T. 2601, AUSTRALIA
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7
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Arnqvist G, Sayadi A, Immonen E, Hotzy C, Rankin D, Tuda M, Hjelmen CE, Johnston JS. Genome size correlates with reproductive fitness in seed beetles. Proc Biol Sci 2016; 282:rspb.2015.1421. [PMID: 26354938 DOI: 10.1098/rspb.2015.1421] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
The ultimate cause of genome size (GS) evolution in eukaryotes remains a major and unresolved puzzle in evolutionary biology. Large-scale comparative studies have failed to find consistent correlations between GS and organismal properties, resulting in the 'C-value paradox'. Current hypotheses for the evolution of GS are based either on the balance between mutational events and drift or on natural selection acting upon standing genetic variation in GS. It is, however, currently very difficult to evaluate the role of selection because within-species studies that relate variation in life-history traits to variation in GS are very rare. Here, we report phylogenetic comparative analyses of GS evolution in seed beetles at two distinct taxonomic scales, which combines replicated estimation of GS with experimental assays of life-history traits and reproductive fitness. GS showed rapid and bidirectional evolution across species, but did not show correlated evolution with any of several indices of the relative importance of genetic drift. Within a single species, GS varied by 4-5% across populations and showed positive correlated evolution with independent estimates of male and female reproductive fitness. Collectively, the phylogenetic pattern of GS diversification across and within species in conjunction with the pattern of correlated evolution between GS and fitness provide novel support for the tenet that natural selection plays a key role in shaping GS evolution.
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Affiliation(s)
- Göran Arnqvist
- Animal Ecology, Department of Ecology and Genetics, Uppsala University, Norbyvägen 18D, Uppsala 75236, Sweden
| | - Ahmed Sayadi
- Animal Ecology, Department of Ecology and Genetics, Uppsala University, Norbyvägen 18D, Uppsala 75236, Sweden
| | - Elina Immonen
- Animal Ecology, Department of Ecology and Genetics, Uppsala University, Norbyvägen 18D, Uppsala 75236, Sweden
| | - Cosima Hotzy
- Evolutionary Biology, Department of Ecology and Genetics, Uppsala University, Norbyvägen 18D, Uppsala 75236, Sweden
| | - Daniel Rankin
- Institute of Evolutionary Biology and Environmental Studies, University of Zürich, Zürich, Switzerland
| | - Midori Tuda
- Laboratory of Insect Natural Enemies, Department of Bioresource Sciences, Kyushu University, Fukuoka 812-8581, Japan Institute of Biological Control, Faculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan
| | - Carl E Hjelmen
- Department of Entomology, Texas A&M University, College Station, TX 77843 2475, USA
| | - J Spencer Johnston
- Department of Entomology, Texas A&M University, College Station, TX 77843 2475, USA
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8
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Leinaas HP, Jalal M, Gabrielsen TM, Hessen DO. Inter- and intraspecific variation in body- and genome size in calanoid copepods from temperate and arctic waters. Ecol Evol 2016; 6:5585-95. [PMID: 27547339 PMCID: PMC4983576 DOI: 10.1002/ece3.2302] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2016] [Revised: 06/15/2016] [Accepted: 06/16/2016] [Indexed: 11/06/2022] Open
Abstract
The tendency of ectotherms to get larger in the cold (Bergmann clines) has potentially great implications for individual performance and food web dynamics. The mechanistic drivers of this trend are not well understood, however. One fundamental question is to which extent variation in body size is attributed to variation in cell size, which again is related to genome size. In this study, we analyzed body and genome size in four species of marine calanoid copepods, Calanus finmarchicus, C. glacialis, C. hyperboreus and Paraeuchaeta norvegica, with populations from both south Norwegian fjords and the High Arctic. The Calanus species showed typical interspecific Bergmann clines, and we assessed whether they also displayed similar intraspecific variations-and if correlation between genome size and body size differed between species. There were considerable inter- as well as intraspecific variations in body size and genome size, with the northernmost populations having the largest values of both variables within each species. Positive intraspecific relationships suggest a functional link between body and genome size, although its adaptiveness has not been settled. Impact of additional drivers like phylogeny or specific adaptations, however, was suggested by striking divergences in body size - genome size ratios among species. Thus, C. glacialis and C. hyperboreus, had fairly similar genome size despite very different body size, while P. norvegica, of similar body size as C. hyperboreus, had the largest genome sizes ever recorded from copepods. The inter- and intraspecific latitudinal body size clines suggest that climate change may have major impact on body size composition of keystone species in marine planktonic food webs.
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Affiliation(s)
- Hans Petter Leinaas
- Department of Biosciences University of Oslo P.O. Box 1066 Blindern N-0316 Oslo Norway
| | - Marwa Jalal
- Department of Biosciences University of Oslo P.O. Box 1066 Blindern N-0316 Oslo Norway
| | - Tove M Gabrielsen
- The University Centre in Svalbard P.O.Box 156 9171 Longyearbyen Norway
| | - Dag O Hessen
- Department of Biosciences University of Oslo P.O. Box 1066 Blindern N-0316 Oslo Norway
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9
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HESSEN DAGO, PERSSON JONAS. Genome size as a determinant of growth and life-history traits in crustaceans. Biol J Linn Soc Lond 2009. [DOI: 10.1111/j.1095-8312.2009.01285.x] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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10
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Abstract
SummaryEight species of Tribolium and the related species Alphitobius diaperinus have been microdensitometrically analysed by measuring the nuclear content (1C value) of their Feuigenstained spermatids. The range of mean genome sizes goes from 0·157 pg in T. audax to 0·388 pg in T. brevicornis, including five significantly different groups of values. Also, in ail but one species of Tribolium significant intraspecific heterogeneity of genome size was found. The resemblances in genome size are not generally correlated with genetic homologies among species, but there is a highly significant correlation between genome size and spermatid size.
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11
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Tsutsui ND, Suarez AV, Spagna JC, Johnston JS. The evolution of genome size in ants. BMC Evol Biol 2008; 8:64. [PMID: 18302783 PMCID: PMC2268675 DOI: 10.1186/1471-2148-8-64] [Citation(s) in RCA: 62] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2007] [Accepted: 02/26/2008] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Despite the economic and ecological importance of ants, genomic tools for this family (Formicidae) remain woefully scarce. Knowledge of genome size, for example, is a useful and necessary prerequisite for the development of many genomic resources, yet it has been reported for only one ant species (Solenopsis invicta), and the two published estimates for this species differ by 146.7 Mb (0.15 pg). RESULTS Here, we report the genome size for 40 species of ants distributed across 10 of the 20 currently recognized subfamilies, thus making Formicidae the 4th most surveyed insect family and elevating the Hymenoptera to the 5th most surveyed insect order. Our analysis spans much of the ant phylogeny, from the less derived Amblyoponinae and Ponerinae to the more derived Myrmicinae, Formicinae and Dolichoderinae. We include a number of interesting and important taxa, including the invasive Argentine ant (Linepithema humile), Neotropical army ants (genera Eciton and Labidus), trapjaw ants (Odontomachus), fungus-growing ants (Apterostigma, Atta and Sericomyrmex), harvester ants (Messor, Pheidole and Pogonomyrmex), carpenter ants (Camponotus), a fire ant (Solenopsis), and a bulldog ant (Myrmecia). Our results show that ants possess small genomes relative to most other insects, yet genome size varies three-fold across this insect family. Moreover, our data suggest that two whole-genome duplications may have occurred in the ancestors of the modern Ectatomma and Apterostigma. Although some previous studies of other taxa have revealed a relationship between genome size and body size, our phylogenetically-controlled analysis of this correlation did not reveal a significant relationship. CONCLUSION This is the first analysis of genome size in ants (Formicidae) and the first across multiple species of social insects. We show that genome size is a variable trait that can evolve gradually over long time spans, as well as rapidly, through processes that may include occasional whole-genome duplication. The small genome sizes of ants, combined with their ecological, evolutionary and agricultural importance, suggest that some of these species may be good candidates for future whole-genome sequencing projects.
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Affiliation(s)
- Neil D Tsutsui
- Department of Environmental Science, Policy and Management, University of California-Berkeley, Berkeley, CA 94720, USA
| | - Andrew V Suarez
- Department of Animal Biology and Department of Entomology, University of Illinois, Urbana-Champaign, Urbana, IL 61801, USA
- Institute for Genomic Biology, University of Illinois, Urbana-Champaign, Urbana, IL 61801, USA
| | - Joseph C Spagna
- Department of Animal Biology and Department of Entomology, University of Illinois, Urbana-Champaign, Urbana, IL 61801, USA
- Beckman Institute for Advanced Science and Technology, University of Illinois, Urbana-Champaign, Urbana, IL 61801, USA
| | - J Spencer Johnston
- Department of Entomology, Texas A&M University, College Station, TX 77843-2475, USA
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12
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Abstract
Little information is available on genome size diversity among insects, even in otherwise well-studied groups such as the Lepidoptera. In fact, only six lepidopteran species have been studied to date. The present study therefore represents the first attempt to survey genome size variation in this group, giving estimates for more than 50 species and increasing the coverage of the order to 15 families. Based on this expanded data set, some interesting patterns of variation can be observed, albeit only in a preliminary way. By providing the first large survey of lepidopteran genome sizes, as well as some methodological guidelines and highlights of interesting future work, it is hoped that this study will stimulate further analysis of this diverse group of insects.
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13
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Gregory TR, Hebert PD, Kolasa J. Evolutionary implications of the relationship between genome size and body size in flatworms and copepods. Heredity (Edinb) 2000; 84 ( Pt 2):201-8. [PMID: 10762390 DOI: 10.1046/j.1365-2540.2000.00661.x] [Citation(s) in RCA: 104] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Genome and body sizes were measured in 38 species of turbellarian flatworms and 16 species of copepod crustaceans. Significant positive relationships existed between genome size and body size in both groups. The slopes of these regressions indicated that increases in cell volume are reinforced by increased cell numbers, or that cell volumes show positive allometric variation with genome size. Genome sizes appear to vary in a discontinuous fashion among congeneric species in both groups, indicating that such changes have occurred rapidly, and with potentially profound effects on important morphological characters.
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Affiliation(s)
- T R Gregory
- Department of Zoology, University of Guelph, Guelph, Ontario, Canada N1G 2W1.
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14
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Genetics of mosquitoes. J Genet 1999. [DOI: 10.1007/bf02934462] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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15
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Besansky NJ, Finnerty V, Collins FH. Molecular Perspectives on the Genetics of Mosquitoes. ADVANCES IN GENETICS 1992; 30:123-84. [PMID: 1360745 DOI: 10.1016/s0065-2660(08)60320-x] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- N J Besansky
- Malaria Branch, Centers for Disease Control, Atlanta, Georgia 30333
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16
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Kumar A, Rai KS. Intraspecific variation in nuclear DNA content among world populations of a mosquito, Aedes albopictus (Skuse). TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 1990; 79:748-752. [PMID: 24226734 DOI: 10.1007/bf00224239] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/1990] [Accepted: 02/09/1990] [Indexed: 06/02/2023]
Abstract
Aedes albopictus is commonly distributed in most parts of the Oriental region and on many islands in the Indian and the Pacific Oceans. The species was recently introduced into the United States and Brazil. Feulgen cytophotometric quantitation of haploid nuclear DNA content was carried out for 37 populations of Ae. albopictus to determine the extent of intraspecific variation in nuclear DNA content and whether the range expansion of the species has coincided with an increase in DNA content. The haploid nuclear DNA content varied nearly three-fold. The minimum DNA content was 0.62 pg in Koh Samui from Thailand, and the maximum DNA content was 1.66 pg in Houston-61 from the United States. Statistical comparisons of populations revealed significant differences in DNA contents. No geographic clustering of populations was noted with respect to DNA content. In general, populations from the United States and Brazil had higher DNA contents, but there was no indication that the range expansion had occurred hand in hand with an increase in DNA content. Each population had a specific amount of DNA that is probably imposed by the microenvironment.
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Affiliation(s)
- A Kumar
- Department of Biological Sciences, University of Notre Dame, 46556, Notre Dame, IN, USA
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