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Tamfu AN, Kocak G, Ceylan O, Citak F, Bütün V, Çiçek H. Synthesis of cross‐linked diazaborine‐based polymeric microparticles with antiquorum sensing, anti‐swarming, antimicrobial, and antibiofilm properties. J Appl Polym Sci 2023. [DOI: 10.1002/app.53631] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Affiliation(s)
- Alfred Ngenge Tamfu
- Department of Chemical Engineering, School of Chemical Engineering and Mineral Industries University of Ngaoundere Ngaoundere Cameroon
- Food Quality Control and Analysis Program, Ula Ali Kocman Vocational School Mugla Sitki Kocman University Mugla Turkey
| | - Gökhan Kocak
- Department of Chemistry and Chemical Process Technologies, Vocational School of Higher Education Adiyaman University Adiyaman Turkey
| | - Ozgur Ceylan
- Food Quality Control and Analysis Program, Ula Ali Kocman Vocational School Mugla Sitki Kocman University Mugla Turkey
| | - Funda Citak
- Department of Chemistry, Faculty of Science Eskisehir Osmangazi University Eskisehir Turkey
| | - Vural Bütün
- Department of Chemistry, Faculty of Science Eskisehir Osmangazi University Eskisehir Turkey
| | - Hüseyin Çiçek
- Department of Chemistry, Faculty of Science Mugla Sitki Kocman University Mugla Turkey
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2
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Kocak G, Tamfu AN, Bütün V, Ceylan O. Synthesis of quaternary piperazine methacrylate homopolymers and their antibiofilm and anti‐quorum sensing effects on pathogenic bacteria. J Appl Polym Sci 2021. [DOI: 10.1002/app.50466] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Affiliation(s)
- Gökhan Kocak
- Department of Chemistry and Chemical Process Technologies Vocational School of Higher Education, Adiyaman University Adiyaman Turkey
| | - Alfred Ngenge Tamfu
- Department of Chemical Engineering School of Chemical Engineering and Mineral Industries, University of Ngaoundere Ngaoundere Cameroon
| | - Vural Bütün
- Department of Chemistry, Faculty of Science and Letters Eskisehir Osmangazi University Eskisehir Turkey
| | - Ozgur Ceylan
- Food Quality Control and Analysis Program Ula Ali Kocman Vocational School, Mugla Sitki Kocman University Mugla Turkey
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3
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Khan F, Javaid A, Kim YM. Functional Diversity of Quorum Sensing Receptors in Pathogenic Bacteria: Interspecies, Intraspecies and Interkingdom Level. Curr Drug Targets 2020; 20:655-667. [PMID: 30468123 DOI: 10.2174/1389450120666181123123333] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2018] [Revised: 11/16/2018] [Accepted: 11/16/2018] [Indexed: 01/17/2023]
Abstract
The formation of biofilm by pathogenic bacteria is considered as one of the most powerful mechanisms/modes of resistance against the action of several antibiotics. Biofilm is formed as a structural adherent over the surfaces of host, food and equipments etc. and is further functionally coordinated by certain chemicals produced itself. These chemicals are known as quorum sensing (QS) signaling molecules and are involved in the cross talk at interspecies, intraspecies and interkingdom levels thus resulting in the production of virulence factors leading to pathogenesis. Bacteria possess receptors to sense these chemicals, which interact with the incoming QS molecules. It is followed by the secretion of virulence molecules, regulation of bioluminescence, biofilm formation, antibiotic resistance development and motility behavioral responses. In the natural environment, different bacterial species (Gram-positive and Gram-negative) produce QS signaling molecules that are structurally and functionally different. Recent and past research shows that various antagonistic molecules (naturally and chemically synthesized) are characterized to inhibit the formation of biofilm and attenuation of bacterial virulence by blocking the QS receptors. This review article describes about the diverse QS receptors at their structural, functional and production levels. Thus, by blocking these receptors with inhibitory molecules can be a potential therapeutic approach to control pathogenesis. Furthermore, these receptors can also be used as a structural platform to screen the most potent inhibitors with the help of bioinformatics approaches.
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Affiliation(s)
- Fazlurrahman Khan
- Marine-Integrated Bionics Research Center, Pukyong National University, Busan 48513, South Korea.,Department of Biotechnology, School of Engineering and Technology, Sharda University, Greater Noida 201306, U.P, India
| | - Aqib Javaid
- Department of Biotechnology, School of Engineering and Technology, Sharda University, Greater Noida 201306, U.P, India
| | - Young-Mog Kim
- Marine-Integrated Bionics Research Center, Pukyong National University, Busan 48513, South Korea.,Department of Food Science and Technology, Pukyong National University, Busan 48513, South Korea
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4
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Peppoloni S, Pericolini E, Colombari B, Pinetti D, Cermelli C, Fini F, Prati F, Caselli E, Blasi E. The β-Lactamase Inhibitor Boronic Acid Derivative SM23 as a New Anti- Pseudomonas aeruginosa Biofilm. Front Microbiol 2020; 11:35. [PMID: 32117094 PMCID: PMC7018986 DOI: 10.3389/fmicb.2020.00035] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Accepted: 01/09/2020] [Indexed: 12/15/2022] Open
Abstract
Pseudomonas aeruginosa is a Gram-negative nosocomial pathogen, often causative agent of severe device-related infections, given its great capacity to form biofilm. P. aeruginosa finely regulates the expression of numerous virulence factors, including biofilm production, by Quorum Sensing (QS), a cell-to-cell communication mechanism used by many bacteria. Selective inhibition of QS-controlled pathogenicity without affecting bacterial growth may represent a novel promising strategy to overcome the well-known and widespread drug resistance of P. aeruginosa. In this study, we investigated the effects of SM23, a boronic acid derivate specifically designed as β-lactamase inhibitor, on biofilm formation and virulence factors production by P. aeruginosa. Our results indicated that SM23: (1) inhibited biofilm development and production of several virulence factors, such as pyoverdine, elastase, and pyocyanin, without affecting bacterial growth; (2) decreased the levels of 3-oxo-C12-HSL and C4-HSL, two QS-related autoinducer molecules, in line with a dampened lasR/lasI system; (3) failed to bind to bacterial cells that had been preincubated with P. aeruginosa-conditioned medium; and (4) reduced both biofilm formation and pyoverdine production by P. aeruginosa onto endotracheal tubes, as assessed by a new in vitro model closely mimicking clinical settings. Taken together, our results indicate that, besides inhibiting β-lactamase, SM23 can also act as powerful inhibitor of P. aeruginosa biofilm, suggesting that it may have a potential application in the prevention and treatment of biofilm-associated P. aeruginosa infections.
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Affiliation(s)
- Samuele Peppoloni
- Department of Surgical, Medical, Dental and Morphological Sciences With Interest in Transplant, Oncological and Regenerative Medicine, University of Modena and Reggio Emilia, Modena, Italy
| | - Eva Pericolini
- Department of Surgical, Medical, Dental and Morphological Sciences With Interest in Transplant, Oncological and Regenerative Medicine, University of Modena and Reggio Emilia, Modena, Italy
| | - Bruna Colombari
- Department of Surgical, Medical, Dental and Morphological Sciences With Interest in Transplant, Oncological and Regenerative Medicine, University of Modena and Reggio Emilia, Modena, Italy
| | - Diego Pinetti
- Centro Interdipartimentale "Grandi Strumenti" (CIGS), University of Modena and Reggio Emilia, Modena, Italy
| | - Claudio Cermelli
- Department of Surgical, Medical, Dental and Morphological Sciences With Interest in Transplant, Oncological and Regenerative Medicine, University of Modena and Reggio Emilia, Modena, Italy
| | - Francesco Fini
- Department of Life Sciences, University of Modena and Reggio Emilia, Modena, Italy
| | - Fabio Prati
- Department of Life Sciences, University of Modena and Reggio Emilia, Modena, Italy
| | - Emilia Caselli
- Department of Life Sciences, University of Modena and Reggio Emilia, Modena, Italy
| | - Elisabetta Blasi
- Department of Surgical, Medical, Dental and Morphological Sciences With Interest in Transplant, Oncological and Regenerative Medicine, University of Modena and Reggio Emilia, Modena, Italy
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Kocak G, Cicek H, Ceylan Ö, Bütün V. Antimicrobial and anti-quorum-sensing properties and paint film usage of novel diazaborine-based copolymers. J Appl Polym Sci 2018. [DOI: 10.1002/app.46907] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Affiliation(s)
- Gökhan Kocak
- Department of Chemistry; Adiyaman University; Adiyaman 02040 Turkey
| | - Hüseyin Cicek
- Department of Chemistry; Mugla Sitki Kocman University; Mugla 48000 Turkey
| | - Özgür Ceylan
- Food Quality Control and Analysis Program, Ula Ali Kocman Vocational School; Mugla Sitki Kocman University; Mugla 48147 Turkey
| | - Vural Bütün
- Department of Chemistry; Eskisehir Osmangazi University; Eskisehir 26480 Turkey
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6
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Cicek H, Kocak G, Ceylan Ö, Kutluca EA, Dikmen Z, Bütün V. Antibacterial poly{(4-vinyl phenylboronic acid)-co-[2-(dimethylamino)ethyl methacrylate]} copolymers and their application in water-based paints. J Appl Polym Sci 2018. [DOI: 10.1002/app.46245] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Hüseyin Cicek
- Department of Chemistry, Faculty of Sciences; Mugla Sitki Kocman University; Mugla 48000 Turkey
| | - Gökhan Kocak
- Department of Chemistry; Eskisehir Osmangazi University; Eskisehir 26480 Turkey
- Department of Chemistry; Adiyaman University; Adiyaman 02040 Turkey
| | - Özgür Ceylan
- Food Quality Control and Analysis Program; Ula Ali Kocman Vocational School, Mugla Sitki Kocman University; Mugla 48147 Turkey
| | - Emir Ahmet Kutluca
- Department of Chemistry, Faculty of Sciences; Mugla Sitki Kocman University; Mugla 48000 Turkey
| | - Zeynep Dikmen
- Department of Polymer Science and Technology; Eskisehir Osmangazi University; Eskisehir 26480 Turkey
| | - Vural Bütün
- Department of Chemistry; Eskisehir Osmangazi University; Eskisehir 26480 Turkey
- Department of Polymer Science and Technology; Eskisehir Osmangazi University; Eskisehir 26480 Turkey
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7
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Draganov AB, Wang K, Holmes J, Damera K, Wang D, Dai C, Wang B. Click with a boronic acid handle: a neighboring group-assisted click reaction that allows ready secondary functionalization. Chem Commun (Camb) 2015; 51:15180-3. [PMID: 26327521 PMCID: PMC4603419 DOI: 10.1039/c5cc05890b] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
The feasibility of a neighboring boronic acid-facilitated facile condensation of an aldehyde is described. This reaction is bio-orthogonal, complete at room temperature within minutes, and suitable for bioconjugation chemistry. The boronic acid group serves the dual purpose of catalyzing the condensation reaction and being a handle for secondary functionalization.
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Affiliation(s)
- Alexander B Draganov
- Department of Chemistry and Center for Diagnostics and Therapeutics, Georgia State University, Atlanta, 30303-3965, Georgia, USA.
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Melander RJ, Minvielle MJ, Melander C. Controlling bacterial behavior with indole-containing natural products and derivatives. Tetrahedron 2014; 70:6363-6372. [PMID: 25267859 PMCID: PMC4175420 DOI: 10.1016/j.tet.2014.05.089] [Citation(s) in RCA: 85] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Abstract
Indole has recently been implicated as an important small molecule signal utilized by many bacteria to coordinate various forms of behavior. Indole plays a role in numerous bacterial processes, including: biofilm formation and maintenance, virulence factor production, antibiotic resistance and persister cell formation. Intercepting indole-signaling pathways with appropriately designed small molecules provides a n opportunity to control unwanted bacterial behaviors, and is an attractive anti-virulence therapeutic strategy. In this review, we give an overview of the process controlled by indole signaling, and summarize current efforts to design indole-containing small molecules to intercept these pathways, and detail the synthetic efforts towards accessing indole derived bioactive small molecules.
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Affiliation(s)
- Roberta J. Melander
- Department of Chemistry, North Carolina State University, Raleigh, NC, 27695
| | - Marine J. Minvielle
- Department of Chemistry, North Carolina State University, Raleigh, NC, 27695
| | - Christian Melander
- Department of Chemistry, North Carolina State University, Raleigh, NC, 27695
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9
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Draganov A, Wang D, Wang B. The Future of Boron in Medicinal Chemistry: Therapeutic and Diagnostic Applications. TOPICS IN MEDICINAL CHEMISTRY 2014. [DOI: 10.1007/7355_2014_65] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
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10
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Small molecule inhibitors of AI-2 signaling in bacteria: state-of-the-art and future perspectives for anti-quorum sensing agents. Int J Mol Sci 2013; 14:17694-728. [PMID: 23994835 PMCID: PMC3794749 DOI: 10.3390/ijms140917694] [Citation(s) in RCA: 49] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2013] [Revised: 08/09/2013] [Accepted: 08/09/2013] [Indexed: 02/05/2023] Open
Abstract
Bacteria respond to different small molecules that are produced by other neighboring bacteria. These molecules, called autoinducers, are classified as intraspecies (i.e., molecules produced and perceived by the same bacterial species) or interspecies (molecules that are produced and sensed between different bacterial species). AI-2 has been proposed as an interspecies autoinducer and has been shown to regulate different bacterial physiology as well as affect virulence factor production and biofilm formation in some bacteria, including bacteria of clinical relevance. Several groups have embarked on the development of small molecules that could be used to perturb AI-2 signaling in bacteria, with the ultimate goal that these molecules could be used to inhibit bacterial virulence and biofilm formation. Additionally, these molecules have the potential to be used in synthetic biology applications whereby these small molecules are used as inputs to switch on and off AI-2 receptors. In this review, we highlight the state-of-the-art in the development of small molecules that perturb AI-2 signaling in bacteria and offer our perspective on the future development and applications of these classes of molecules.
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12
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Choi H, Mascuch SJ, Villa FA, Byrum T, Teasdale ME, Smith JE, Preskitt LB, Rowley DC, Gerwick L, Gerwick WH. Honaucins A-C, potent inhibitors of inflammation and bacterial quorum sensing: synthetic derivatives and structure-activity relationships. ACTA ACUST UNITED AC 2012; 19:589-98. [PMID: 22633410 DOI: 10.1016/j.chembiol.2012.03.014] [Citation(s) in RCA: 63] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2012] [Revised: 03/23/2012] [Accepted: 03/27/2012] [Indexed: 10/28/2022]
Abstract
Honaucins A-C were isolated from the cyanobacterium Leptolyngbya crossbyana which was found overgrowing corals on the Hawaiian coast. Honaucin A consists of (S)-3-hydroxy-γ-butyrolactone and 4-chlorocrotonic acid, which are connected via an ester linkage. Honaucin A and its two natural analogs exhibit potent inhibition of both bioluminescence, a quorum-sensing-dependent phenotype, in Vibrio harveyi BB120 and lipopolysaccharide-stimulated nitric oxide production in the murine macrophage cell line RAW264.7. The decrease in nitric oxide production was accompanied by a decrease in the transcripts of several proinflammatory cytokines, most dramatically interleukin-1β. Synthesis of honaucin A, as well as a number of analogs, and subsequent evaluation in anti-inflammation and quorum-sensing inhibition bioassays revealed the essential structural features for activity in this chemical class and provided analogs with greater potency in both assays.
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Affiliation(s)
- Hyukjae Choi
- Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA 92093, USA
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13
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A pro-drug approach for selective modulation of AI-2-mediated bacterial cell-to-cell communication. SENSORS 2012; 12:3762-72. [PMID: 22737036 PMCID: PMC3376627 DOI: 10.3390/s120303762] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/29/2011] [Revised: 02/26/2012] [Accepted: 03/15/2012] [Indexed: 01/08/2023]
Abstract
The universal quorum sensing autoinducer, AI-2, is utilized by several bacteria. Analogs of AI-2 have the potential to modulate bacterial behavior. Selectively quenching the communication of a few bacteria, in the presence of several others in an ecosystem, using analogs of AI-2 is non-trivial due to the ubiquity of AI-2 processing receptors in many bacteria that co-exist. Herein, we demonstrate that when an AI-2 analog, isobutyl DPD (which has been previously shown to be a quorum sensing, QS, quencher in both Escherichia coli and Salmonella typhimurium) is modified with ester groups, which get hydrolyzed once inside the bacterial cells, only QS in E. coli, but not in S. typhimurium, is inhibited. The origin of this differential QS inhibition could be due to differences in analog permeation of the bacterial membranes or ester hydrolysis rates. Such differences could be utilized to selectively target QS in specific bacteria amongst a consortium of other species that also use AI-2 signaling.
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Bunders CA, Minvielle MJ, Worthington RJ, Ortiz M, Cavanagh J, Melander C. Intercepting bacterial indole signaling with flustramine derivatives. J Am Chem Soc 2011; 133:20160-3. [PMID: 22091927 DOI: 10.1021/ja209836z] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
Indole signaling is one of the putative universal signaling networks in bacteria. We have investigated the use of desformylflustrabromine (dFBr) derivatives for the inhibition of biofilm formation through modulation of the indole-signaling network in Escherichia coli and Staphylococcus aureus . We have found dFBr derivatives that are 10-1000 times more active than indole itself, demonstrating that the flustramine family of indolic natural products represent a privileged scaffold for the design of molecules to control pathogenic bacterial behavior.
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Affiliation(s)
- Cynthia A Bunders
- Department of Chemistry, North Carolina State University, Raleigh, North Carolina 27695, USA
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15
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Lowery CA, Salzameda NT, Sawada D, Kaufmann GF, Janda KD. Medicinal chemistry as a conduit for the modulation of quorum sensing. J Med Chem 2010; 53:7467-89. [PMID: 20669927 DOI: 10.1021/jm901742e] [Citation(s) in RCA: 49] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Colin A Lowery
- Department of Chemistry and Department of Immunology and Microbial Science, The Skaggs Institute for Chemical Biology, The Scripps Research Institute, 10550 N Torrey Pines Road, La Jolla, California 92037, USA
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Galloway WRJD, Hodgkinson JT, Bowden SD, Welch M, Spring DR. Quorum Sensing in Gram-Negative Bacteria: Small-Molecule Modulation of AHL and AI-2 Quorum Sensing Pathways. Chem Rev 2010; 111:28-67. [DOI: 10.1021/cr100109t] [Citation(s) in RCA: 454] [Impact Index Per Article: 32.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Warren R. J. D. Galloway
- Department of Chemistry and Department of Biochemistry, University of Cambridge, Cambridge, CB2 1EW U.K
| | - James T. Hodgkinson
- Department of Chemistry and Department of Biochemistry, University of Cambridge, Cambridge, CB2 1EW U.K
| | - Steven D. Bowden
- Department of Chemistry and Department of Biochemistry, University of Cambridge, Cambridge, CB2 1EW U.K
| | - Martin Welch
- Department of Chemistry and Department of Biochemistry, University of Cambridge, Cambridge, CB2 1EW U.K
| | - David R. Spring
- Department of Chemistry and Department of Biochemistry, University of Cambridge, Cambridge, CB2 1EW U.K
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17
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Natural and synthetic small boron-containing molecules as potential inhibitors of bacterial and fungal quorum sensing. Chem Rev 2010; 111:209-37. [PMID: 21171664 DOI: 10.1021/cr100093b] [Citation(s) in RCA: 142] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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18
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Plakunov VK, Strelkova EA, Zhurina MV. Persistence and adaptive mutagenesis in biofilms. Microbiology (Reading) 2010. [DOI: 10.1134/s0026261710040028] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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